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Conserved domains on  [gi|259517661|sp|Q8BZH1|]
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RecName: Full=Protein-glutamine gamma-glutamyltransferase 4; AltName: Full=Experimental autoimmune prostatitis antigen 1; AltName: Full=Transglutaminase-4; Short=TGase-4

Protein Classification

Transglut_N and Transglut_C domain-containing protein( domain architecture ID 10467682)

protein containing domains Transglut_N, TGc, and Transglut_C

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Transglut_N pfam00868
Transglutaminase family;
12-117 1.14e-28

Transglutaminase family;


:

Pssm-ID: 459971  Cd Length: 114  Bit Score: 110.40  E-value: 1.14e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   12 VNVERKLNAAAHHTSEYQTKKLVLRRGQIFTLKVILNRPLQPQ-DELKVTFTSGQRdPPY----MVELDPVTSYRSKGWQ 86
Cdd:pfam00868   3 VDLQKNENAKAHHTDEYSSDRLIVRRGQPFTITLRFNRPFDPQlDKLTLEFETGPK-PSEskgtLVVFPLGKSGDASSWS 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 259517661   87 VKIAKQSGVEVILNVISAADAVVGRYKMRVN 117
Cdd:pfam00868  82 ARVESISGNSLSVSITSPANAPVGRYTLTVE 112
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
574-670 1.87e-20

Transglutaminase family, C-terminal ig like domain;


:

Pssm-ID: 460002  Cd Length: 106  Bit Score: 86.63  E-value: 1.87e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661  574 AFSVEMPSTGKVKQPLVITSKFTNTLPIPLTNIKFS-----VESLGLAN---MKSWEQETVPPGKTITFQMECTPVKAGP 645
Cdd:pfam00927   2 EMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLSlsaqtVEYNGVLGaefKKKSLELTLEPGEEKSVPIKITPSKYGP 81

                          90       100
                  ....*....|....*....|....*
gi 259517661  646 QKFIVKFISRQVKEVHAEKVVLISK 670
Cdd:pfam00927  82 RQLLVEFSSDALAKVKGYRNVLVAQ 106
TGc smart00460
Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish ...
 248-340 1.32e-19

Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.


:

Pssm-ID: 214673  Cd Length: 68  Bit Score: 83.20  E-value: 1.32e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   248 MPVRYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTEKNLTvdiyldesgktiphltkdSVWNFHVWTDAWMKrqdlp 327
Cdd:smart00460   2 LKTKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLR------------------SIWEAHAWAEVYLE----- 58

                           90
                   ....*....|...
gi 259517661   328 hgyDGWQVLDSTP 340
Cdd:smart00460  59 ---GGWVPVDPTP 68
 
Name Accession Description Interval E-value
Transglut_N pfam00868
Transglutaminase family;
12-117 1.14e-28

Transglutaminase family;


Pssm-ID: 459971  Cd Length: 114  Bit Score: 110.40  E-value: 1.14e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   12 VNVERKLNAAAHHTSEYQTKKLVLRRGQIFTLKVILNRPLQPQ-DELKVTFTSGQRdPPY----MVELDPVTSYRSKGWQ 86
Cdd:pfam00868   3 VDLQKNENAKAHHTDEYSSDRLIVRRGQPFTITLRFNRPFDPQlDKLTLEFETGPK-PSEskgtLVVFPLGKSGDASSWS 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 259517661   87 VKIAKQSGVEVILNVISAADAVVGRYKMRVN 117
Cdd:pfam00868  82 ARVESISGNSLSVSITSPANAPVGRYTLTVE 112
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
574-670 1.87e-20

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 86.63  E-value: 1.87e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661  574 AFSVEMPSTGKVKQPLVITSKFTNTLPIPLTNIKFS-----VESLGLAN---MKSWEQETVPPGKTITFQMECTPVKAGP 645
Cdd:pfam00927   2 EMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLSlsaqtVEYNGVLGaefKKKSLELTLEPGEEKSVPIKITPSKYGP 81

                          90       100
                  ....*....|....*....|....*
gi 259517661  646 QKFIVKFISRQVKEVHAEKVVLISK 670
Cdd:pfam00927  82 RQLLVEFSSDALAKVKGYRNVLVAQ 106
TGc smart00460
Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish ...
 248-340 1.32e-19

Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.


Pssm-ID: 214673  Cd Length: 68  Bit Score: 83.20  E-value: 1.32e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   248 MPVRYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTEKNLTvdiyldesgktiphltkdSVWNFHVWTDAWMKrqdlp 327
Cdd:smart00460   2 LKTKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLR------------------SIWEAHAWAEVYLE----- 58

                           90
                   ....*....|...
gi 259517661   328 hgyDGWQVLDSTP 340
Cdd:smart00460  59 ---GGWVPVDPTP 68
Transglut_core pfam01841
Transglutaminase-like superfamily; This family includes animal transglutaminases and other ...
 251-337 3.33e-12

Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.


Pssm-ID: 376628 [Multi-domain]  Cd Length: 108  Bit Score: 63.19  E-value: 3.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661  251 RYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTeknltvdiyldesgktiphltkDSVWNFHVWTDAWMKrqdlphgY 330
Cdd:pfam01841  50 GKGDCEDFASLFVALLRALGIPARYVTGYLRGPDT----------------------VRGGDAHAWVEVYLP-------G 100


                  ....*..
gi 259517661  331 DGWQVLD 337
Cdd:pfam01841 101 YGWVPVD 107
YebA COG1305
Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, ...
 251-339 1.31e-05

Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440916 [Multi-domain]  Cd Length: 174  Bit Score: 46.15  E-value: 1.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661 251 RYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTEKNLTVDiyldesgktiphltkdsvwNFHVWTDAWmkrqdLPhGY 330
Cdd:COG1305  112 RRGVCRDFAHLLVALLRALGIPARYVSGYLPGEPPPGGGRAD-------------------DAHAWVEVY-----LP-GA 166


                 ....*....
gi 259517661 331 dGWQVLDST 339
Cdd:COG1305  167 -GWVPFDPT 174
 
Name Accession Description Interval E-value
Transglut_N pfam00868
Transglutaminase family;
12-117 1.14e-28

Transglutaminase family;


Pssm-ID: 459971  Cd Length: 114  Bit Score: 110.40  E-value: 1.14e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   12 VNVERKLNAAAHHTSEYQTKKLVLRRGQIFTLKVILNRPLQPQ-DELKVTFTSGQRdPPY----MVELDPVTSYRSKGWQ 86
Cdd:pfam00868   3 VDLQKNENAKAHHTDEYSSDRLIVRRGQPFTITLRFNRPFDPQlDKLTLEFETGPK-PSEskgtLVVFPLGKSGDASSWS 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 259517661   87 VKIAKQSGVEVILNVISAADAVVGRYKMRVN 117
Cdd:pfam00868  82 ARVESISGNSLSVSITSPANAPVGRYTLTVE 112
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
574-670 1.87e-20

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 86.63  E-value: 1.87e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661  574 AFSVEMPSTGKVKQPLVITSKFTNTLPIPLTNIKFS-----VESLGLAN---MKSWEQETVPPGKTITFQMECTPVKAGP 645
Cdd:pfam00927   2 EMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLSlsaqtVEYNGVLGaefKKKSLELTLEPGEEKSVPIKITPSKYGP 81

                          90       100
                  ....*....|....*....|....*
gi 259517661  646 QKFIVKFISRQVKEVHAEKVVLISK 670
Cdd:pfam00927  82 RQLLVEFSSDALAKVKGYRNVLVAQ 106
TGc smart00460
Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish ...
 248-340 1.32e-19

Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.


Pssm-ID: 214673  Cd Length: 68  Bit Score: 83.20  E-value: 1.32e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661   248 MPVRYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTEKNLTvdiyldesgktiphltkdSVWNFHVWTDAWMKrqdlp 327
Cdd:smart00460   2 LKTKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLR------------------SIWEAHAWAEVYLE----- 58

                           90
                   ....*....|...
gi 259517661   328 hgyDGWQVLDSTP 340
Cdd:smart00460  59 ---GGWVPVDPTP 68
Transglut_core pfam01841
Transglutaminase-like superfamily; This family includes animal transglutaminases and other ...
 251-337 3.33e-12

Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.


Pssm-ID: 376628 [Multi-domain]  Cd Length: 108  Bit Score: 63.19  E-value: 3.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661  251 RYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTeknltvdiyldesgktiphltkDSVWNFHVWTDAWMKrqdlphgY 330
Cdd:pfam01841  50 GKGDCEDFASLFVALLRALGIPARYVTGYLRGPDT----------------------VRGGDAHAWVEVYLP-------G 100


                  ....*..
gi 259517661  331 DGWQVLD 337
Cdd:pfam01841 101 YGWVPVD 107
YebA COG1305
Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, ...
 251-339 1.31e-05

Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440916 [Multi-domain]  Cd Length: 174  Bit Score: 46.15  E-value: 1.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259517661 251 RYGQCWVFSGILTTALRAVGIPARSVTNFESAHDTEKNLTVDiyldesgktiphltkdsvwNFHVWTDAWmkrqdLPhGY 330
Cdd:COG1305  112 RRGVCRDFAHLLVALLRALGIPARYVSGYLPGEPPPGGGRAD-------------------DAHAWVEVY-----LP-GA 166


                 ....*....
gi 259517661 331 dGWQVLDST 339
Cdd:COG1305  167 -GWVPFDPT 174
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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