|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
2.14e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 454.67 E-value: 2.14e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
....*.
gi 257786502 321 TNTLIP 326
Cdd:MTH00112 321 KNTLTA 326
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.79e-132 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 381.46 E-value: 1.79e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTtILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 257786502 321 TNTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
3.79e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 375.41 E-value: 3.79e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*..
gi 257786502 321 TNTLIPV 327
Cdd:MTH00070 321 TNNLLSL 327
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
1.34e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 341.06 E-value: 1.34e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPN-KMKQWPPKT 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
....*..
gi 257786502 320 STNTLIP 326
Cdd:MTH00105 321 KPMTLLP 327
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
1.37e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 290.33 E-value: 1.37e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*..
gi 257786502 321 TNTLIPV 327
Cdd:MTH00200 321 SNLLVGL 327
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-307 |
1.98e-89 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 271.80 E-value: 1.98e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 7 LISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 87 TQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIMSIALGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 167 WMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPALNTALML 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 257786502 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPN 307
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
2.94e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 204.29 E-value: 2.94e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGqwditqLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILlitSHSLNPSLLTLMAIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 161 SIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 241 NTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*
gi 257786502 321 TNTLI 325
Cdd:MTH00160 313 LILNF 317
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-302 |
8.96e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.70 E-value: 8.96e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 1 MTPLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 81 TGQWDITqlthpvacLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPT-TILLITSHSLNPSLLTLMAI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 160 MSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINaLKLPTLMTSWTKTPA 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGD-SGSMKDLGSLKPSYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786502 240 LNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-319 |
4.00e-51 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 172.66 E-value: 4.00e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 12 SILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTInahstgQWDITQLTH 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 PVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIMSIALGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 172 QTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPALNTALMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257786502 252 AGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKT 319
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKT 315
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
2.31e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 154.83 E-value: 2.31e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 12 SILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSStinahSTGQWDItqLTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNL--YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 PVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHslNPSLLTLMAIMSIALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 172 QTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKTPALNTALMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 257786502 252 AGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
1.40e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 137.17 E-value: 1.40e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 10 IVSILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQ 88
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 89 LTHPV------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKL----PPTTILLITSHSLNPS 152
Cdd:COG1007 188 IAAALaagganspllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 153 ---LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMII-IITYNPK-LTLLAFY--VYILMTASIFLTMNKI-NA 224
Cdd:COG1007 268 wqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVILLLsRK 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257786502 225 LKLPTLMTSW----TKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 348 GGEAEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.55e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 129.77 E-value: 1.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 87 --------TQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLitSHSLNPSLLTLMA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 159 IMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYVYILMTASIFLTMNKINALK--LPTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257786502 233 SWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.90e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 122.62 E-value: 2.90e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 14 LLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 93 VA------------CLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKL----PPTTILLITSHSLNPS---L 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 154 LTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWM---IIIITYNPkLTLLAFY--VYILMTASIFLTmnkINALKLP 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEG-YSAVLFYllAYLFMTLGAFGV---ISLLRRK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786502 229 ----TLMTSWT----KTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:PRK05777 349 ggeaESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-271 |
5.66e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 5.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 23 SNHWMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 91 HPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPL-ITALLLSTMMKLPPttILLITSHSLNPS-------LLTLMAIMSI 162
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 163 ALGGWMGLNQTQTRKIMAFSSISHLGWMIIII----TYNPKLTLLAFYVYILMTASIFLTMNKINALKLPT-----LMTS 233
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 257786502 234 WTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
3.03e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 114.27 E-value: 3.03e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 PV------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILL-------ITSHSLNPS 152
Cdd:TIGR01770 191 FLsngmlnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 153 LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLA--FY--VYILMTASIFLTMNKINALKLP 228
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYifIYALMSLGAFGVLSLLRSYKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786502 229 -----TLMTSWTKT-PALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 351 wieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
10-296 |
2.08e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 111.65 E-value: 2.08e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 10 IVSILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI-- 86
Cdd:MTH00199 103 ILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqg 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 87 --TQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNpsLLTLMAIMSIAL 164
Cdd:MTH00199 183 inSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIY 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 165 GGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYVYILMTA---SIFLTMNKINALKLPTLMTSwTKT 237
Cdd:MTH00199 261 GAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKN 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 257786502 238 PALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:MTH00199 340 PVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
3.49e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.45 E-value: 3.49e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 14 LLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH-- 91
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 --------PVACLLLTSAIAIKLGLTPFHFWFPEVLQGSP-LITALLLSTMMKLPPTTILLITSHSLNPS-------LLT 155
Cdd:COG0651 197 aeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPsPVSALLSGLLTKVGVYAILRVLTLLFGADpalflgtLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 156 LMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFLT------------M 219
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaieratgtrdL 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257786502 220 NKINALklptlmtsWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGL--------GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
1.25e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 95.70 E-value: 1.25e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 3 PLAKLISIVSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAV---------EAATKYFLVQATASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 74 --------------STINAHSTGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLppT 139
Cdd:MTH00198 267 calyfgftgnegmlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 140 TILLITSHSLNPSLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI---LMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 217 LTM----------------------NKINALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 257786502 275 MTAATTIISMLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.78e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 83.00 E-value: 1.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL--------THPVACLLLTSAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaenpTVVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 105 KLGLTPFHFWFPEVLQG-SPLITALLLSTMMKLPPTTILLITSH------SLNPSLLTLM---AIMSIALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfRFALGLGWLLavlALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 175 TRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFLT----MNKINALKLPTLMTSWTKTPALNTALML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 257786502 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.90e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 82.36 E-value: 2.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 51 RAVEAATKYFLVQATASALVLFS-STINAHSTGQWDI---------TQLTHPVACLL----LTSAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 117 EVLQGSPLITALLLSTMMKLP----PTTILLITSHSLNP---SLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAasalATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 190 MII-IITYNPKLTLLAFYVYILMtaSIFLTMNKINALKLPTLMT----------SWTKTPALNTALMLTLLSLAGLPPLT 258
Cdd:CHL00049 319 VIIgIIVGDSNDGYASMITYMLF--YIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 257786502 259 GFLPK 263
Cdd:CHL00049 397 GFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
7.41e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.17 E-value: 7.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 50 PRAVEAATKYFLVQATASALVLF-SSTINAHSTGQwdiTQLTH-------------PVACLLLTSAIAIKLGLTPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspslglALALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 116 PEVLQGSPLITALLLSTMMKLPPTTI---LLITSHSLNPS----LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 189 WMIIIITYNPKLTLLAFYVYILmtASIFLTMNKINALKLPTLMTS----------WTKTPALNTALMLTLLSLAGLPPLT 258
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFYLL--AYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 257786502 259 GFLPK 263
Cdd:PRK02504 392 GFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
4.54e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.58 E-value: 4.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 33 LEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTInahSTGQWDI-------------TQLTHPVACLLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIAL---LYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 99 TSAIAIKLGLTPFHFWFPEVLQGSPL-ITALLLST-------MMKLPPTTILLITSHSLNPSLLTLMAIMSIALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSsISAMLLVIkqaglyaLARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 171 NQTQTRKIMAFSSISHLGWMII-----IITYNPklTLLAFYVYILMTASIFLTMNKINALKLPTL--------------- 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHALYKALLFLtagaviyetgtrnln 384
|
250 260 270
....*....|....*....|....*....|....*...
gi 257786502 231 -MTSWTKT-PALNTALMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 385 eLGGLARTmPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-275 |
2.67e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.55 E-value: 2.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 23 SNHWMTAWAGLEINTLSILPLISKSHHpRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDIT-------QLTHP--- 92
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTgfa 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 93 -VACLLLTSAIAIKLGLTPFHFWFPEVLQGSPL-ITALL---LSTM--------MKLPPTTILLIT-----SHSLNPSLL 154
Cdd:PRK08668 196 lIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQsFSAVLsgqLSKLgaygfllvLYVLPGTKLFSEfgtyrGVPLFNYIL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 155 TLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLA--FYV--YILMTASIFLTmnkINALKLPTL 230
Cdd:PRK08668 276 AWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGglFHVfnHALFKGLFFLI---FAAVIYRTG 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 257786502 231 MTSWT-------KTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEM 275
Cdd:PRK08668 353 TTKISemgglieKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
3.83e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.90 E-value: 3.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL-----------THPVACLLLTSA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 102 IAIKLGLTPFHFWFPEVLQGSPLITALLLS-TMMKLPPTTI-----------LLITSHSLNPSLLTLmAIMSIALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMIL-AALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 170 LNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFLTMNKI----NALKLPTLMTSWTKTPALN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786502 242 TALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
4.04e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.72 E-value: 4.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHPVAC-----LLLTSAIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 120 QGSPLITALLLSTMMKLPPTTILLI-------TSHSLNPSLLTLmAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMII 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 193 -IITYNPKLTLLAFYVYI---LMTASIFL----TMNKINALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 257786502 265 LIIQELVKqemtaATTIISMLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-267 |
4.66e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.48 E-value: 4.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 49 HPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW--DITQLTH--------PVACLLLTSAIAIKLGLTPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplpltaqLLLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 119 L-QGSPLITALLLSTMMK----------LPpttILLITSHSLNPSLLTLmAIMSIALGGWMGLNQTQTRKIMAFSSISHL 187
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 188 GWMII-IITYNPKLTLLAFYVYI---LMTASIFL----TMNKINALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTG 259
Cdd:COG1008 312 GFVLLgIFALNPLGLQGAVLQMVshgLITAALFLlvgvLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
....*...
gi 257786502 260 FLPKWLII 267
Cdd:COG1008 392 FVGEFLVL 399
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
4.14e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.38 E-value: 4.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATA------SALVLFSSTINAHSTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 87 TQLTHPV----------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSP-LITALLLSTMMKLPPTTILLITS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786502 149 LNPSLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYIL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
1.05e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.23 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 48 HHPRAVEAATKYFLVQAT------ASALVLFS-------STINAHstGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFW 114
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlgllLGILLLGAiagtlnfSELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 115 FPEVLQG----SPLITAlllSTMMKlppTTI-LLITSH---SLNPSLLTLMAIMSIA---LGGWMGLNQTQTRKIMAFSS 183
Cdd:COG1009 234 LPDAMEGptpvSALLHA---ATMVK---AGVyLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYST 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 184 ISHLGWMIIIITynpkLTLLAFYVYILMT-----ASIFLT------------MNKINALklptlmtsWTKTPALNTALML 246
Cdd:COG1009 308 VSQLGYMFLALG----VGAYVAALFHLLThaffkALLFLGagsvihatgtrdIRKMGGL--------RKKMPITAITFLI 375
|
250 260
....*....|....*....|....*
gi 257786502 247 TLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAAL 400
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
1.63e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.62 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 20 TITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFsSTI----NAHstgqwdiTQLTHPVAC 95
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALF-GTIlvyaNAA-------TVMGDGEMA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 96 LLLTSAIAI----------------------KLGLTPFHFWFPE-----------VLQGSPLITALLLSTMMKLppttIL 142
Cdd:PRK06458 196 ILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 143 LITSHSLNPS-LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYILM----TASIFL 217
Cdd:PRK06458 272 DAAIGSDFPGrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFF 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786502 218 T------------MNKINALklptlmtsWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 352 AsgnvlqkygtrdINVIRGL--------LKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
2.66e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.23 E-value: 2.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 110 PFHFWFPEVLQGSPLITALLLS-TMMKLpptTILLITShsLNPSL---------LTLMAIMSIALGGWMGLNQTQTRKIM 179
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSaTMVKA---GIYLLAR--LNPVLggtplwqtiLPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 180 AFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFLTmnkINALKLPTLMTSWTKTPALNTALMLTL------- 248
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMV---AGIIDHETGTRDITKLGGLRRAMPITAaaallaa 364
|
170
....*....|....*...
gi 257786502 249 LSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 365 LSMAGLPPLFGFLAKELI 382
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
2.67e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQ-----LTHPVACLLLTSAIAIKLG- 107
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 108 -----LTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLIT-----SHSLNPSLLTLMAIMSIA---LGGWMGLNQTQ 174
Cdd:PRK06277 210 lygsgLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 175 TRKIMAFSSISHLGWMIIIITYNPKLTLLA--FYV--YILMTASIFLTMNKINALK----LPTLMTSWTKTPALNTALML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAgiFHAinHVIYKSALFLGAGIVSYRTktsnLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786502 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-288 |
3.79e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 51.51 E-value: 3.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 50 PRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL----------THPVACLLLTSAIAIKLGLTPFHFWFPEVL 119
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDSY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 120 QGSP-LITALLLSTMMK-----LPPTTILLITSHSLNpSLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIII 193
Cdd:PRK12665 237 PTAPaPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 194 ITYNPKLTLLA--FYV--YILMTASIFLTMNKIN----ALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK12665 316 IALSTVAGLSGaiYYVahHITVQTTLFLVVGLIErqagSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVA 395
|
250 260
....*....|....*....|....*....
gi 257786502 266 IIQELVKQ------EMTAATTIISMLSLL 288
Cdd:PRK12665 396 LLEAGAEDgtwlawALVAGGVVTSLLTLY 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.10e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 51.49 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH--PVACLLLTSAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 111 FHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPS--LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 189 WMIIiityNPKLTLLAFYVYILMTASIFLTmnkinALKLPTL-MTSWTKTPA-LNTALMLTL--LSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILA----APLVGGLYALAHGLVKSTLFLC-----AGALPSRnFTELISQMLgIGKWIPLTMasFSIAGFPLLAGFVSKV 353
|
....*..
gi 257786502 265 LIIQELV 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-315 |
5.44e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.10 E-value: 5.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFS--------STIN-AHSTGQWDITQLTHPVACL--LLTSAI 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGigllygtfGTLNmAHIAMRLNDMGDTATLTTIalLFLLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 103 AIKLGLTPFhFWFPEVLQGSPLITALLLSTMMK-------LPPTTILLITSHSLNPSLLTLMAIMSIALGGWMGLNQTQT 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 176 RKIMAFSSISHLGWMIIIITYNPKLTL-----LAFYVYILMTAsIFLTMNKINAL----KLPTLMTSWTKTPALNTALML 246
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGIngaifYLVHDMVVKTA-LFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLI 375
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786502 247 TLLSLAGLPPLTGFLPKWLIIQELVKQE---MTAATTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQW 315
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGKVLLVQGALDNGayiLLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-263 |
6.47e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.08 E-value: 6.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 79 HSTGQWDITQL-THPVACLLLTSAIAI-------KLGLTPFHFWFPEVLQGSPLITALLLST-MMKlppTTILLI----- 144
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAaMVK---AGIYLVarlap 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 145 ---TSHSLNPSLLTLmAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFL 217
Cdd:PRK12644 259 gfaDVPVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLlahaLFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 257786502 218 TMNKINAL-------KLPTLmtsWTKTPALNTALMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 338 VVGIIDHStgtrdirKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
79-304 |
1.11e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 79 HSTGQWDITQLTHPVACLLLTSAIAiKLGLTPFHFWFPEVLQGSPLITALL---------------LSTMMKLPPT-TIL 142
Cdd:PRK12650 196 HSDVWAEKPGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLhaaavvkagiylllrFSPVFHDVAVwNWL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 143 LITShslnpSLLTlmAIMsialGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYI----LMTASIFLT 218
Cdd:PRK12650 275 LIIV-----GMIT--ALM----GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFML 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 219 MNKIN----ALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIIsMLSLLGLFFYL 294
Cdd:PRK12650 344 IGVVDhqagTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVL-LLVGAALGAVF 422
|
250
....*....|
gi 257786502 295 RLAYCSTITL 304
Cdd:PRK12650 423 TFAYSARLVL 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-305 |
3.44e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.53 E-value: 3.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 72 FSSTINAHSTGqwDITQLTHPvaCLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNP 151
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQ 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 152 SLLTLMAI-----MSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIII-TYNPKLTLLAFYVYILMTASIFLTMNK-INA 224
Cdd:MTH00020 270 APLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSvIHA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 225 L-------KLPTLMTSwtkTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQE-MTAATTIISMLSLLGLFFYLRL 296
Cdd:MTH00020 350 LsdeqdmrKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRL 426
|
....*....
gi 257786502 297 AYCSTITLP 305
Cdd:MTH00020 427 IYLTFLSNT 435
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
4.12e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 48.27 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHP-----VACLLLTS---AIAIKLGLTPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLplppgVQYWLFLAffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 118 VLQGSPLITALLLS-TMMKLPPTTILLI-------TSHSLNPSLLTLmAIMSIALGGWMGLNQTQTRKIMAFSSISHLGW 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAgILLKMGAYGLLRFslplfpdASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
....*
gi 257786502 190 MIIII 194
Cdd:PRK05846 316 VTLGI 320
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
8.51e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 8.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 PVACLLLTSAI--AIKLGLtpfHFWFPEVLQGSPLITALLLSTMMkLPPTTILLITSHSLNPS------LLTLMAIMSIA 163
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKapltllIITIFGALTAF 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 164 LGGWMGLNQTQTRKIMAFSSISHLGWMIIIITY--NPKLTLLAFYVYILMTASIFL---------TMNKINALKLPTLMT 232
Cdd:MTH00032 302 FAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIH 381
|
170 180 190
....*....|....*....|....*....|....*.
gi 257786502 233 SwtkTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 382 S---IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-291 |
8.77e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 47.42 E-value: 8.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAH-STGQWDITQLTHPVAC-----LLLTSAIAIKLG 107
Cdd:PRK08667 141 EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 108 LTPFHFWFPEVLQGSPL-ITALLLSTMMKLPPTTILLITSHSLNPSL-----LTLMAIMSIALGGWMGLNQTQTRKIMAF 181
Cdd:PRK08667 221 IIPFHKWLPYAHPASPSnVSALMSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 182 SSISHLG--------WMIIIITYNPKLTLLA-------------FYVYILMTA-SIFLTMNKINALKLPTLMTSWTKTPA 239
Cdd:PRK08667 301 SSIENIGiilmgiglYVIFGVYGLDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKLMPYTSA 380
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 257786502 240 LntaLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTI-ISMLSLLGLF 291
Cdd:PRK08667 381 L---FLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
9.02e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 47.25 E-value: 9.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 103 AIKLGLTPFHFWFPEVLQGSPL-ITALLLSTMMKLPPTTIL----LITSHSLNPS--LLTLMAIMSIALGGWMGLNQTQT 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIaIAALFGALLTKVGVYAIArtftLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 176 RKIMAFSSISHLGWMIIIITYNPKLTLLAFYVY----ILMTASIFL---TMNKINALKLPTLMTSWTKT-PALNTALMLT 247
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLligIMIKITGTTDLKKMGGLIKRyPVLGWMFFIA 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 257786502 248 LLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
9.61e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.09 E-value: 9.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 15 LGTTITITSNHWMTAWAGLEINTLS---ILPLISKSHHPRAVEAATKYFlvqatASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 PVACLLLTSAIAIKLGLTPFHF--WFPEVLQGSPL-ITALLLSTMMKLPPTTILLITSHSLNPSL----LTLMAI--MSI 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSnFSAILSATMTLMGVYGILKMTILTQTIPIgyfgLTILAIgaFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 163 ALGGWMGLNQTQTRKIMAFSSISHLGWMII-----IITYNPKLTLLAFYVYILMTASIFLTMNKINALKLPTLMTSWTKT 237
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 257786502 238 PALNT-------ALMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 318 YSKKIrnrwielGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
3.49e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.35 E-value: 3.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATAS------ALVLFSSTINAHSTGQWDITQLTHPVACLLLTSAIAIKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 107 GLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPS------LLTLMAIMSIALGGWMGLNQTQTRKIMA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphvigyVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 181 FSSISHLGWMIIIITY---NPKLTLLAFYVYILMTASI----FLTMNKIN----ALKLPTLMTSWTKTPALNTALMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 257786502 250 SLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
8.13e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 8.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 107 GLTPFHFWFPEVLQGSPLITALLLSTM-MKLPPTTILLITSHSLNPSL-----LTLMAIMSIALGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 181 FSSISHLGWMII--------IITYNPKLTLLAFY--VYILMTASIFLTMNKINA---------LKLPTLMTSWTKTPALN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVLFLGAgsvwfrtghRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 257786502 242 TALMLTLLSLAGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
1.17e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 43.60 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH- 91
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 92 ---------PVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPL-ITALLLSTMMK---LPPTTILLITSHSLNPS----LL 154
Cdd:PRK08377 197 agtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 155 TLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYIL----MTASIFLTMNKINALKLPTL 230
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMInhaiVKALLFLAVGYVGITLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 231 MTSWT----KTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEglgkRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.24e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.05 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 48 HHPRAVEAATKYFLVQAtASALVLFSSTINAHS-TGQWDITQLTHP--------------VACLLLTSAIAIKLGLTPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITA-GGGLFMFAGFLLLHViTGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 113 FWFPEVLQGSPLITALLLSTMMkLPPTTILLITSH---SLNPSLLTLMA---IMSIALGGWMGLNQTQTRKIMAFSSISH 186
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAWFILVSgtgMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 187 LGWMIIIITYN----PKLTLLAFYVYIL----MTASIFLTMNKI-------NALKLPTLMTSWTKTPALNTalmLTLLSL 251
Cdd:PRK12649 314 LAYLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLFLVAGIVaheaatrDIRKLGGLRKEMPITFIVAS---IAALAM 390
|
250
....*....|..
gi 257786502 252 AGLPPLTGFLPK 263
Cdd:PRK12649 391 AGIPPLNGFLSK 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-289 |
1.56e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 43.27 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 11 VSILLGTTITITSNhWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVqATASALVLF--SSTINAHSTGQWD--- 85
Cdd:PRK06589 124 LTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKI-LMISALLLFlpAVILIYTKTGNLDfvs 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 86 --ITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMM----KLPPTTILLITSHSLNP-------S 152
Cdd:PRK06589 202 ggLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLqrifaefN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 153 LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYIL----MTASIFLTMNKINALK-- 226
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfAKICLFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786502 227 --LPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTaATTIISMLSLLG 289
Cdd:PRK06589 362 dqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQP-WLSIIVMLVVIA 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-288 |
1.63e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.59 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 110 PFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLITSHSLNPS-----LLTLMAIMSIALGGWMGLNQTQTRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 185 SHLGWMIIII------TYNPKLTLLAFYVYILMtASIFLTMN-----------------KINALKLPTLMTSWTKTPALN 241
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiidhEAGTRDIRILSGMRQLFPKMN 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 257786502 242 TALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSLL 288
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIV 433
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.68e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 55 AATKYFLVQATASALVL--FSSTINAHSTGQWDITQL---THPVAC-LLLTSAI----AIKLGLTPFHFWFPEV-LQGSP 123
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 124 LITALLLSTMMKLPPTTIL-------LITSHSLNPSLLTLmAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITY 196
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglfPEAWVYLAPWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 197 NPKLTLLAFYVYI----LMTASIFLTMNKI-------NALKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK06473 317 ATPLSILAAVFQMishgLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
.
gi 257786502 266 I 266
Cdd:PRK06473 397 V 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
3.40e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.22 E-value: 3.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 101 AIAIKLGLTPFHFWFPEVLQGSPLITALLLS-TMMKLP-------PTTILLITSHSLNPSLLTlMAIMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGgyglvrlSWPILPLGAQNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 173 TQTRKIMAFSSISHLGWMIIIITYNPKLTLLAFYVYIL---MTASIFLTMNKINALKLPTLMTSWTK-----TPALNTAL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 257786502 245 MLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
152-300 |
4.18e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.94 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 152 SLLTLMAIMSialggwmGLNQTQTRKIMAFSSISHLGWMIIIITYN-PKLTLLAFYVYILMTASIFLTMNKI-----NAL 225
Cdd:MTH00209 247 SLTTLMASMS-------ANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGNIihshgHSQ 319
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786502 226 KLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAATTIISMLSL-LGLFFYLRLAYCS 300
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
5.29e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.62 E-value: 5.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 55 AATKYFLVQATASALVLF----------SSTINAHSTGQWDITQLTHPVACLLLTSAIAIKLGLTPFHFWFPEV-LQGSP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAaflgivwlsgSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 124 LITALLLSTMMKLPPTTILLI-------TSHSLNPSLLTLMAImSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITY 196
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 197 NPKLTLLA----FYVYILMTASIFLTMNKINAL-------KLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLGavaqMISHGLILALLFHLVGIVERKvgtrdldVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 257786502 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
5.45e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 55 AATKYFLVQATASALVLFSSTINAHSTGQ--WDITQLTH---PVACLLLTS-----AIAIKLGLTPFHFWFPEVL-QGSP 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLYagfliAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257786502 124 LITALLLSTMMKLPPTTI------LLITSHSLNPSLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-129 |
7.28e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.22 E-value: 7.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 10 IVSILLGTTITITSNHW---MTAWA--GLEINTLsilpLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW 84
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLlvlIAAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSL 181
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 257786502 85 DITQL--------THP---VACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALL 129
Cdd:PRK08168 182 SLSALwahlaaqgASPslqAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALL 237
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
96-303 |
1.42e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 40.38 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 96 LLLTSAI--AIKLGLtpfHFWFPEVLQGSPLITALLLSTMMkLPPTTILLITSHSL---NPSLLTLMAI---MSIALGGW 167
Cdd:MTH00210 216 LLFIGAVgkSAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLIIRSGPLfegSPLALTIVTIlgaLTAFFAAT 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 168 MGLNQTQTRKIMAFSSISHLGWMII---IITYNPKLTLL---AFYvyilmTASIFLTMNK-INAL-------KLPTLMTS 233
Cdd:MTH00210 292 VGVVQNDLKKVIAYSTCSQLGYMVMvcgISNYSTSLFHLmnhAFF-----KALLFLSAGSvIHAVsdeqdmrKMGGLIKS 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786502 234 wtkTPALNTALMLTLLSLAGLPPLTGFLPKWLIIqELV--KQEMTAATTIISMLSLLGLFFYLRLAYCSTIT 303
Cdd:MTH00210 367 ---IPFTYVMILIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT 434
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
80-268 |
1.56e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.13 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 80 STGQWDITQLTHPVACLLLTSAIAI----KLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILL-----ITSHSLN 150
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSSTYWF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 151 PSLLTLMAIMSIALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITYN-PKLTLLAFYVYILMTASIFLTMNKI-----NA 224
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHS 322
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 257786502 225 LKLPTLMTSWTKTPALNTALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 323 QDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-290 |
9.53e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 37.91 E-value: 9.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 93 VACLLLTSAIAIKLGLTPFHFWFPEVLQGSPLITALLLSTMMKLPPTTILLIT----------SHSLNPSLLTLMAIMSI 162
Cdd:PRK12666 211 AGAALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFAIMTKVGIYAILRLStllfgpeagaSAGFGQDWLLPGGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786502 163 ALGGWMGLNQTQTRKIMAFSSISHLGWMIIIITY-NPKLTLLAFYvYI----LMTASIFL-------------------- 217
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLgNPAATAAALY-YLvhstLAAAALFLladlverqrgaaadrlavtp 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786502 218 TMNKINALKLPTLMTSWTKTPA-LNTALMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTAAT-TIISMLSLLGL 290
Cdd:PRK12666 370 ELYDLDEEEEEEVGVAIPATMAlLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAwWLWALVLLSGL 444
|
|
| |
