|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.09e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 428.86 E-value: 3.09e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 257786468 321 TNTLIPVLTSLSILLLPLTPLMPTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
5.94e-122 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 354.88 E-value: 5.94e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTtILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 257786468 321 TNTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
5.64e-120 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 349.60 E-value: 5.64e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*..
gi 257786468 321 TNTLIPV 327
Cdd:MTH00070 321 TNNLLSL 327
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
4.41e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 314.48 E-value: 4.41e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPN-KMKQWPPKT 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
....*..
gi 257786468 320 PTNTLIP 326
Cdd:MTH00105 321 KPMTLLP 327
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
4.55e-89 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 271.07 E-value: 4.55e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*..
gi 257786468 321 TNTLIPV 327
Cdd:MTH00200 321 SNLLVGL 327
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-307 |
8.62e-80 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 247.15 E-value: 8.62e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 12 SILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 92 PLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIMSIAFGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 257786468 252 AGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPN 307
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-300 |
5.59e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 185.41 E-value: 5.59e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGqwditqLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILlitSHSLNPSLLTLMAIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCS 300
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS 292
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-302 |
7.09e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 161.59 E-value: 7.09e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 1 MTPLAKLISTMSILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITqlthplacLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPT-TILLITSHSLNPSLLTLMAI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 160 MSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINvLKLPTLMTSWTKTPM 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGD-SGSMKDLGSLKPSYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786468 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-319 |
1.83e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.02 E-value: 1.83e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 12 SILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTInahstgQWDITQLTH 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 92 PLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAIMSIAFGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257786468 252 AGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKT 319
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKT 315
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
5.68e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.97 E-value: 5.68e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 12 SILLGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSStinahSTGQWDITQLTh 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNLYLSL- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 92 pLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHslNPSLLTLMAIMSIAFGGWMGLN 171
Cdd:MTH00197 80 -LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 257786468 252 AGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.94e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 115.90 E-value: 1.94e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 13 ILLGTTITITS**WMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 87 --------TQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLitSHSLNPSLLTLMA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 159 IMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYLYILMTASIFLTMNKINVLK--LPTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257786468 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
9.67e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 112.90 E-value: 9.67e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 10 TMSILLGTTITITS**WMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQ 88
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 89 LTHPL------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKL----PPTTILLITSHSLNPS 152
Cdd:COG1007 188 IAAALaagganspllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 153 ---LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII-IITYNPK-LTLLAFYL--YILMTASIFLTMNKINVL 225
Cdd:COG1007 268 wqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLLSRK 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257786468 226 KLPTLMTS-----WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 348 GGEAEEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-271 |
5.67e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 102.39 E-value: 5.67e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 23 S**WMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 91 HPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSL-ITALLLSTMMKLPPttILLITSHSLNPS-------LLTLMAIMSI 162
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 163 AFGGWMGLNQTQIRKIMAFSSISHLGWMIIII----TYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPT-----LMTS 233
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 257786468 234 WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.97e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 102.98 E-value: 2.97e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 14 LLGTTITITS**WMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLF--------SSTIN----AHS 80
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSfagiAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKL----PPTTILLITSHSLNPS---L 153
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 154 LTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWM---IIIITYNPkLTLLAFYL--YILMTASIF---LTMNKINVL 225
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEG-YSAVLFYLlaYLFMTLGAFgviSLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786468 226 KlpTLMTSWT----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK05777 352 A--ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.80e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 99.32 E-value: 4.80e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 13 ILLGTTITITS**WMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 88 QLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNpsLLTLMAIMSIAFGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 168 MGLNQTQIRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYLYILMTASIFLTMNKINVLK--LPTLMTSWTKTPMLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786468 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
5.00e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.25 E-value: 5.00e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 13 ILLGTTITITS**WMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 92 PL------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILL-------ITSHSLNPS 152
Cdd:TIGR01770 191 FLsngmlnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 153 LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLA--FYL--YILMTASIFLTMNKINVLKLP 228
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786468 229 -----TLMTSWTKT-PMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 351 wieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
2.99e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 90.98 E-value: 2.99e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 30 WAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH----------PLACLLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 100 SAIAIKLGLTPFHFWFPEVL-QGSSLITALLLSTMMKLPP----TTILLITSHSLNPSLLTLMAIM---SIAFGGWMGLN 171
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVyailRVLTLLFGADPALFLGTLLLVLgllTMLVGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLT----MNKINVLKLPTLMTSWTKTPMLNTT 243
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAA 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 257786468 244 LMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:COG0651 373 FLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
5.84e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 84.91 E-value: 5.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 15 LGTTITITS**WMTAWAGLEINTLSILPLISKSHHPRAV---------EAATKYFLVQATASALVLFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 74 --STINAHSTGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLppTTILLITSHSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 152 SLLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI---LMTASIFLTM--------- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALASFTVictleefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 220 -------------NKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 257786468 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
5.86e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 75.69 E-value: 5.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL--------ACLLLTSAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 105 KLGLTPFHFWFPEVLQG-SSLITALLLSTMMKLPPTTILLITSH------SLNPSLLTLM---AIMSIAFGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfRFALGLGWLLavlALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFL-------TMNKINVLKLPTLMTswtKTPMLNTT 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786468 244 LMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.51e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.03 E-value: 1.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 51 RAVEAATKYFLVQATASALVLFS-STINAHSTGQWDI---------TQLTHPLACLL----LTSAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 117 EVLQGS-----------SLITALLLSTMMklppTTILLITSHSLNPSLLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSIS 185
Cdd:CHL00049 239 DVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 186 HLGWMII-IITYNPK------LTLLAFylYILMT----ASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGL 254
Cdd:CHL00049 315 QIGYVIIgIIVGDSNdgyasmITYMLF--YIFMNlgtfACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 257786468 255 PPLTGFLPK 263
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
2.72e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.25 E-value: 2.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 49 HPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW--DITQLTH--------PLACLLLTSAIAIKLGLTPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplpltaqLLLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 119 L-QGSSLITALLLSTMMK----------LPpttILLITSHSLNPSLLTLmAIMSIAFGGWMGLNQTQIRKIMAFSSISHL 187
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
....*
gi 257786468 188 GWMII 192
Cdd:COG1008 312 GFVLL 316
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
4.81e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 60.45 E-value: 4.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 50 PRAVEAATKYFLVQATASALVLF-SSTINAHSTGQwdiTQLTH-------------PLACLLLTSAIAIKLGLTPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspslglALALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 116 PEVLQGSSLITALLLSTMMKLPPTTI---LLITSHSLNPS----LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 189 WMIIIITYNPKLTLLAFYLYILmtasIFLTMN--KINVLKLPTLMTS----------WTKTPMLNTTLMLTLLSLAGLPP 256
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFYLL----AYLFMNlgAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPP 389
|
....*..
gi 257786468 257 LTGFLPK 263
Cdd:PRK02504 390 LAGFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
5.43e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.50 E-value: 5.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL----------ACLLLTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMsenptvvakiALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 102 IAIKLGLTPFHFWFPEVL-QGSSLITALLLST-------MMKLPPTTILLITSHSLNPSLLTLMAIMSIAFGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIkqaglyaLARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 174 QIRKIMAFSSISHLGWMII-----IITYNPklTLLAFYLYILMTASIFLTMNKInVLKLPTLMTSWT------------- 235
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHA-LYKALLFLTAGAviyetgtrnlnel 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 257786468 236 -----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 gglarTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
2.31e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.41 E-value: 2.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHPLAC-----LLLTSAIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 120 QGSSLITALLLSTMMKLPPTTILLI-------TSHSLNPSLLTLmAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 193 -IITYNPKLTLLAFYLYI---LMTASIFL----TMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 257786468 265 LIIQELVKqemtaTTTIISMLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.41e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.16 E-value: 1.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 34 EINTLSILPLISKSHHpRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDIT-------QLTHP----LACLLLTSAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTgfalIVFLFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 103 AIKLGLTPFHFWFPE-----------VLQG--SSLITALLLSTMMKLPPTTILL----ITSHSLNPSLLTLMAIMSIAFG 165
Cdd:PRK08668 207 VAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYILAWLGNISIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 166 GWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTL-----------LAFYLYILMTASIFLTMNKINVLKLPTLMtsw 234
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFagglfhvfnhaLFKGLFFLIFAAVIYRTGTTKISEMGGLI--- 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257786468 235 TKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
1.52e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.90 E-value: 1.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW---DITQLTHPL--------ACLLLTSA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLnmgDMFLIIQDLptnraiqiGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 102 IAIKLGLTPFHFWFPEVLQGS-SLITALLLSTMMKLPPTTI-----------LLITSHSLNPSLLTLmAIMSIAFGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMIL-AALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 170 LNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLTMNKI----NVLKLPTLMTSWTKTPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786468 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
7.71e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.67 E-value: 7.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHP-----------LACLLltsAIAIKLGLTPFHFW 114
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLplppgvqywlfLAFFI---AFAVKMPMFPLHTW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 115 FPEVLQ-----GSSLITALLLST----MMK--LPpttILLITSHSLNPSLLTLmAIMSIAFGGWMGLNQTQIRKIMAFSS 183
Cdd:PRK05846 234 LPDAHVqaptaGSVLLAGILLKMgaygLLRfsLP---LFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSS 309
|
170
....*....|.
gi 257786468 184 ISHLGWMIIII 194
Cdd:PRK05846 310 ISHMGFVTLGI 320
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
2.52e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.08 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 48 HHPRAVEAATKYFLVQAT------ASALVLFS-------STINAHstGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFW 114
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlgllLGILLLGAiagtlnfSELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 115 FPEVLQG----SSLITAlllSTMMKlppTTI-LLITSH---SLNPSLLTLMAIMSIA---FGGWMGLNQTQIRKIMAFSS 183
Cdd:COG1009 234 LPDAMEGptpvSALLHA---ATMVK---AGVyLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYST 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 184 ISHLGWMII-------------IITYnpkltllAFY--LYILMTASIFLTMNKINVLKLPTLmtsWTKTPMLNTTLMLTL 248
Cdd:COG1009 308 VSQLGYMFLalgvgayvaalfhLLTH-------AFFkaLLFLGAGSVIHATGTRDIRKMGGL---RKKMPITAITFLIGA 377
|
250 260
....*....|....*....|...
gi 257786468 249 LSLAGLPPLTGFLPKWLIIQELV 271
Cdd:COG1009 378 LSLAGIPPFAGFFSKEAILEAAL 400
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
4.48e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.46 E-value: 4.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 110 PFHFWFPEVLQGSSLITALLLS-TMMKLpptTILLITShsLNPSL---------LTLMAIMSIAFGGWMGLNQTQIRKIM 179
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSaTMVKA---GIYLLAR--LNPVLggtplwqtiLPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 180 AFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLTMNKIN-------VLKLPTLmtsWTKTPMLNTTLMLTL 248
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAA 364
|
170
....*....|....*...
gi 257786468 249 LSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 365 LSMAGLPPLFGFLAKELI 382
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
30-210 |
6.36e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.91 E-value: 6.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 30 WAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATA------SALVLFSSTINAHSTGQWDITQLTHP----------L 93
Cdd:PRK08676 128 WIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAHasllspsvlgA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 94 ACLLLTSAIAIKLGLTPFHFWFPEV-LQGSSLITALLLSTMMKLPPTTILLITS-------HSLNPSLLTLMAIMSIAFG 165
Cdd:PRK08676 208 SFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAEQFSNVLIGLGIFSIAVA 287
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 257786468 166 GWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL 210
Cdd:PRK08676 288 AFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
2.31e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 2.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL-----------ACLLLTSAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 103 AIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLIT-----SHSLNPSLLTLMAIMSIA---FGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLY----ILMTASIFLTMNKINVLK----LPTLMTSWTKTPMLNTTLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHainhVIYKSALFLGAGIVSYRTktsnLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786468 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
5.34e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.03 E-value: 5.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 92 PLACLLLTSAI--AIKLGLtpfHFWFPEVLQGSSLITALLLSTMMkLPPTTILLITSHSLNPS------LLTLMAIMSIA 163
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKapltllIITIFGALTAF 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 164 FGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYL--YILMTASIFL---------TMNKINVLKLPTLMT 232
Cdd:MTH00032 302 FAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLsagsvihstTVDEQDMRKMGGLIH 381
|
170 180 190
....*....|....*....|....*....|....*.
gi 257786468 233 SwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 382 S---IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
8.73e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.33 E-value: 8.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 55 AATKYFLVQATASALVLFSSTINAHSTGQ--WDITQLTH---PLACLLLTS-----AIAIKLGLTPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLYagfliAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257786468 124 LITALLLSTMMKLPPTTI------LLITSHSLNPSLLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-305 |
1.26e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.99 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 72 FSSTINAHSTGqwDITQLThpLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNP 151
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDIT--LICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQ 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 152 SLLTLMAI-----MSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIItynpKLTLLAFYLYILMT-----ASIFLTMNK 221
Cdd:MTH00020 270 APLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNhaffkALLFLSAGS 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 222 I--------NVLKLPTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLS-LLGLFF 292
Cdd:MTH00020 346 VihalsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFY 422
|
250
....*....|...
gi 257786468 293 YLRLAYCSTITLP 305
Cdd:MTH00020 423 SIRLIYLTFLSNT 435
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-263 |
1.52e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.84 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 79 HSTGQWDITQL-THPLACLLLTSAIAI-------KLGLTPFHFWFPEVLQGSSLITALLLST-MMKlppTTILLI----- 144
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAaMVK---AGIYLVarlap 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 145 ---TSHSLNPSLLTLmAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLA----FYLYILMTASIFL 217
Cdd:PRK12644 259 gfaDVPVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAglamLLAHALFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 257786468 218 TMNKIN-------VLKLPTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 338 VVGIIDhstgtrdIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
30-211 |
2.89e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 45.69 E-value: 2.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 30 WAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSsTI----NAHstgqwdiTQLTHPLACLLLTSAIAI- 104
Cdd:PRK06458 134 WVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFG-TIlvyaNAA-------TVMGDGEMAILWTELLKHa 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 105 ---------------------KLGLTPFHFWFPE-----------VLQGSSLITALLLSTMMKLppttILLITSHSLNPS 152
Cdd:PRK06458 206 slldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LIDAAIGSDFPG 281
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 153 -LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILM 211
Cdd:PRK06458 282 rLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLN 341
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.01e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 4.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 48 HHPRAVEAATKYFLVQAtASALVLFSSTINAHS-TGQWDITQL-----------THPL---ACLLLTSAIAIKLGLTPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITA-GGGLFMFAGFLLLHViTGTYDIATIlqdselienikGHPLfliTLILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 113 FWFPEVLQGSSLITALLLSTMMkLPPTTILLITSH---SLNPSLLTLMA---IMSIAFGGWMGLNQTQIRKIMAFSSISH 186
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAWFILVSgtgMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 187 LGWMIIIITYN----PKLTLLAFYLYIL----MTASIFLTMNKI-------NVLKLPTLMTswtKTPMLNTTLMLTLLSL 251
Cdd:PRK12649 314 LAYLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLFLVAGIVaheaatrDIRKLGGLRK---EMPITFIVASIAALAM 390
|
250
....*....|..
gi 257786468 252 AGLPPLTGFLPK 263
Cdd:PRK12649 391 AGIPPLNGFLSK 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-315 |
4.01e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.33 E-value: 4.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFS--------STIN-AHSTGQWDITQLTHPLACL--LLTSAI 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGigllygtfGTLNmAHIAMRLNDMGDTATLTTIalLFLLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 103 AIKLGLTPFhFWFPEVLQGSSLITALLLSTMMK-------LPPTTILLITSHSLNPSLLTLMAIMSIAFGGWMGLNQTQI 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 176 RKIMAFSSISHLGWMIIIITYNPKLTLLA--FYLY---ILMTAsIFLTMNKINVL----KLPTLMTSWTKTPMLNTTLML 246
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGINGaiFYLVhdmVVKTA-LFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLI 375
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786468 247 TLLSLAGLPPLTGFLPKWLIIQELVKQE---MTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQW 315
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGKVLLVQGALDNGayiLLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
5.69e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.69 E-value: 5.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 55 AATKYFLVQATASALVL--FSSTINAHSTGQWDITQL---THPLAC-LLLTSAI----AIKLGLTPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 124 LITALLLSTMMKLPPTTIL-------LITSHSLNPSLLTLmAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITY 196
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglfPEAWVYLAPWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 197 NPKLTLLAFYLYI----LMTASIFLTMNKI-------NVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK06473 317 ATPLSILAAVFQMishgLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
.
gi 257786468 266 I 266
Cdd:PRK06473 397 V 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
79-263 |
5.86e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 5.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 79 HSTGQWDITQLTHPLACLLLTSAIAiKLGLTPFHFWFPEVLQGSSLITALL---------------LSTMMKLPPT-TIL 142
Cdd:PRK12650 196 HSDVWAEKPGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLhaaavvkagiylllrFSPVFHDVAVwNWL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 143 LITShslnpSLLTlmAIMSIAFGgwmgLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLT 218
Cdd:PRK12650 275 LIIV-----GMIT--ALMGAVFA----VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFML 343
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 257786468 219 MNKIN----VLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 344 IGVVDhqagTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-291 |
7.49e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.34 E-value: 7.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAH-STGQWDITQLTHP-----LACLLLTSAIAIKLG 107
Cdd:PRK08667 141 EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASagilsLVFLLLFLGFGIKAG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 108 LTPFHFWFPEVLQGS-SLITALLLSTMMKLPPTTILLITSHSLNPSL-----LTLMAIMSIAFGGWMGLNQTQIRKIMAF 181
Cdd:PRK08667 221 IIPFHKWLPYAHPASpSNVSALMSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 182 SSISHLG--------WMIIIITYNPKLTLLA-------------FYLYILMTA-SIFLTMNKINVLKLPTLMTSwtkTPM 239
Cdd:PRK08667 301 SSIENIGiilmgiglYVIFGVYGLDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPY 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 257786468 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTI-ISMLSLLGLF 291
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-268 |
1.15e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.80 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 50 PRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL----------THPLACLLLTSAIAIKLGLTPFHFWFPEVL 119
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDSY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 120 -QGSSLITALLLSTMMK-----LPPTTILLITSHSLNpSLLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIII 193
Cdd:PRK12665 237 pTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 194 ITYNPKLTLLAFYLY----ILMTASIFLTMNKI-------NVLKLPTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLP 262
Cdd:PRK12665 316 IALSTVAGLSGAIYYvahhITVQTTLFLVVGLIerqagssSLRRLGGLAKA---SPLLAVLFFVPALNLGGIPPFSGFIG 392
|
....*.
gi 257786468 263 KWLIIQ 268
Cdd:PRK12665 393 KVALLE 398
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.16e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.79 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH--PLACLLLTSAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 111 FHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS--LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 189 WMIIiityNPKLTLLAFYLYILMTASIFLTMNKINVLKLptlmTSWTKTPMLN---TTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 FILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNF----TELISQMLGIgkwIPLTMASFSIAGFPLLAGFVSKVL 354
|
....*.
gi 257786468 266 IIQELV 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-194 |
8.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 8.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 101 AIAIKLGLTPFHFWFPEV-----LQGSSLITALLLST----MMKLpPTTILLITSHSLNPSLLTlMAIMSIAFGGWMGLN 171
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggygLVRL-SWPILPLGAQNLAPAVIA-MGIVGIVYGSFATCR 316
|
90 100
....*....|....*....|...
gi 257786468 172 QTQIRKIMAFSSISHLGWMIIII 194
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVSITL 339
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.27e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.47 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 55 AATKYFLVQATASALVLF----------SSTINAHSTGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAaflgivwlsgSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 125 ITALLLSTMMKLPPTTILLI--------TSHSLNPSLLTLMAImSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITY 196
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRfglqlfpqTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 197 NPKLTLLAFYLYI----LMTASIFLTMNKI-------NVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLGAVAQMishgLILALLFHLVGIVerkvgtrDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 257786468 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.43e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.58 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 107 GLTPFHFWFPEVLQGSSLITALLLSTM-MKLPPTTILLITSHSLNPSL----LTLMAIMSIAF-GGWMGLNQTQIRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvALLVLGMITAFvGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 181 FSSISHLGWMII--------IITYNPKLTLLAFY--LYILMTASIFLTM---------NKINVLKLPTLMTSWTKTPMLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 257786468 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-213 |
2.21e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.93 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 80 STGQWDITQLTH-------PLACLLLtsAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS 152
Cdd:MTH00211 187 NLNSWEISQLFIlnldltlFLLGLLL--AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNN 264
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786468 153 LLTLMAIMSIA-----FGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKltLLAFyLYILMTA 213
Cdd:MTH00211 265 QLILGAVLLLGaltmlFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP--QLAF-LHICTHA 327
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
2.35e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.57 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATAS------ALVLFSSTINAHSTGQWDITQLTHPLACLLLTSAIAIKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 107 GLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS------LLTLMAIMSIAFGGWMGLNQTQIRKIMA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphvigyVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 181 FSSISHLGWMIIIITY---NPKLTLLAFYLYILMTASI----FLTMNKIN----VLKLPTLMTSWTKTPMLNTTLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 257786468 250 SLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-289 |
2.95e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.41 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVqATASALVLF--SSTINAHSTGQWD-----ITQLTHPLACLLLTSAIAIK 105
Cdd:PRK06589 145 YELLTISTAFLIGHTRNNISLSGGYKYLKI-LMISALLLFlpAVILIYTKTGNLDfvsggLFSKNQSIILLLMFIYGIAK 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 106 LGLTPFHFWFPEVLQGSSLITALLLSTMM----KLPPTTILLITSHSLNP-------SLLTLMAIMSIAFGGWMGLNQTQ 174
Cdd:PRK06589 224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLqrifaefNWLIFIPIVSIFYSSLKALKTDN 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL----MTASIFLTMNKINVLK----LPTLMTSWTKTPMLNTTLML 246
Cdd:PRK06589 304 IKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfAKICLFYSMGSIYSLKkedqVDKLHGTSKSFPLISFIISI 383
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 257786468 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTaTTTIISMLSLLG 289
Cdd:PRK06589 384 SSLSLIGIPIFSGFISKFLILLAASEQNQP-WLSIIVMLVVIA 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-220 |
3.17e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.35 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 110 PFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS-----LLTLMAIMSIAFGGWMGLNQTQIRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 257786468 185 SHLGWMIIII------TYNPKLTLLAFYLYILMtASIFLTMN 220
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMN 348
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-191 |
6.47e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 38.34 E-value: 6.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 50 PRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL--THPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITA 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786468 128 LLLS---------TMMKLPPTTILLItshslnpsllTLMAIMSIaFGGWMGLNQTQIRKIMAFSSISHLGWMI 191
Cdd:PRK12668 219 VFLSafttktavyALARAFPGTELLI----------YIGAAMAV-YGVFFALLENDLRRLLSYHIVSQVGYMV 280
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
33-296 |
7.05e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.21 E-value: 7.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH----------PLACLLLTSAI 102
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQlagtidptvaQVGLALLIFGL 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 103 AIKLGLTPFHFWFPEVLQGSSL-ITALLLSTMMK---LPPTTILLITSHSLNPS----LLTLMAIMSIAFGGWMGLNQTQ 174
Cdd:PRK08377 217 AVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLVIIMATLTVFFAELSALRQKN 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL----MTASIFLTMNKINVLKLPTLMTSWT----KTPMLNTTLML 246
Cdd:PRK08377 297 VKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMInhaiVKALLFLAVGYVGITLGGTEIEKFEglgkRMPLTALALTI 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 257786468 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK08377 377 GALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
101-194 |
7.16e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 38.00 E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 101 AIAIKLGLTPFHFWFP----EVLQGSSLITALLLSTMMKLPPTTI---LLITSHSLNPSLLTLMAIMSIAFGGWMGLNQT 173
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPdthgEAHYSTCMLLAGILLKMGAYGLIRInmeLLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
90 100
....*....|....*....|.
gi 257786468 174 QIRKIMAFSSISHLGWMIIII 194
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGI 320
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
152-300 |
8.73e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.09 E-value: 8.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786468 152 SLLTLMAIMSiafggwmGLNQTQIRKIMAFSSISHLGWMIIIITYN-PKLTLLAFYLYILMTASIFLTMNKI-----NVL 225
Cdd:MTH00209 247 SLTTLMASMS-------ANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGNIihshgHSQ 319
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786468 226 KLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSL-LGLFFYLRLAYCS 300
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| |
