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Conserved domains on  [gi|256010102|gb|ACU55124|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Paracontias rothschildi]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
1-99 3.17e-53

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00111:

Pssm-ID: 469782  Cd Length: 323  Bit Score: 168.54  E-value: 3.17e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDLT-QPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00111 223 GPFALFFLAEYANILLMNTLTTILFLNPSTLNlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLT 302

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00111 303 LALCLWHTSMPISLAGLPPQ 322
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-99 3.17e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 168.54  E-value: 3.17e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDLT-QPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00111 223 GPFALFFLAEYANILLMNTLTTILFLNPSTLNlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLT 302

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00111 303 LALCLWHTSMPISLAGLPPQ 322
NADHdh pfam00146
NADH dehydrogenase;
2-85 9.64e-24

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 91.38  E-value: 9.64e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102    2 PFALFFLAEYANIMMMNTLTCTLFMNPGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTLA 81
Cdd:pfam00146 217 RFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLA 296


                  ....
gi 256010102   82 LFLW 85
Cdd:pfam00146 297 NLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-85 4.85e-22

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 87.49  E-value: 4.85e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLF----MNPGDLTQPDMF--TINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFL 76
Cdd:COG1005  232 FALFFLAEYANMFLVSALATTLFlggwLGPFPILPLGGLpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLL 311


                 ....*....
gi 256010102  77 PLTLALFLW 85
Cdd:COG1005  312 PLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-99 3.17e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 168.54  E-value: 3.17e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDLT-QPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00111 223 GPFALFFLAEYANILLMNTLTTILFLNPSTLNlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLT 302

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00111 303 LALCLWHTSMPISLAGLPPQ 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-99 1.32e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 151.30  E-value: 1.32e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDL-TQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00134 224 GPFALFFLAEYANILLMNTLSAILFLGASHIpTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLT 303

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00134 304 LALVIWHLALPIAFAGLPPQ 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-99 1.51e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 151.31  E-value: 1.51e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPG-DLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00071 223 GPFALFFLAEYANILMMNTLSTILFLGSTyNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPIT 302

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00071 303 LAMTIFHISLPISTLGIPPM 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-99 2.36e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 148.23  E-value: 2.36e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPG-DLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00104 218 GPFALFFMAEYANIIMMNALTTILFLGAFhNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLT 297

                         90       100
                 ....*....|....*....|
gi 256010102  80 LALFLWHTSFPTTLSGLPPQ 99
Cdd:MTH00104 298 LALCMWHISLPIMTASIPPQ 317
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-98 1.77e-33

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 117.32  E-value: 1.77e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDLTqpdmftINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTL 80
Cdd:MTH00218 220 GPFALFFLAEYMNILFMNTLSVILFLGTSLTT------INLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293

                         90
                 ....*....|....*...
gi 256010102  81 ALFLWHTSFPTTLSGLPP 98
Cdd:MTH00218 294 ALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-98 6.99e-33

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 115.84  E-value: 6.99e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNpGDLTQPDMFTINLM---LKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLP 77
Cdd:MTH00040 222 GPFALFFIAEYANIIFMNLLSVILFLG-GGSPFNEIFPINIIivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLP 300

                         90       100
                 ....*....|....*....|.
gi 256010102  78 LTLALFLWHTSFPTTLSGLPP 98
Cdd:MTH00040 301 LSIGLLIFYLLLLSLLNILPP 321
NADHdh pfam00146
NADH dehydrogenase;
2-85 9.64e-24

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 91.38  E-value: 9.64e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102    2 PFALFFLAEYANIMMMNTLTCTLFMNPGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTLA 81
Cdd:pfam00146 217 RFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLA 296


                  ....
gi 256010102   82 LFLW 85
Cdd:pfam00146 297 NLLL 300
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-95 1.62e-23

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 90.96  E-value: 1.62e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDltqpdmfTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTL 80
Cdd:MTH00195 220 GPFALIFMAEYSNIIFMSVLTTILFLGGGG-------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292

                         90
                 ....*....|....*
gi 256010102  81 ALFLWHTSFPTTLSG 95
Cdd:MTH00195 293 SLLIPLAAIPFALNS 307
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-84 1.41e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 88.39  E-value: 1.41e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNpGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTL 80
Cdd:MTH00143 219 GGFALLFLAEYANILFMSLLTVVLFFG-GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSL 297


                 ....
gi 256010102  81 ALFL 84
Cdd:MTH00143 298 SILV 301
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 3-98 1.81e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 88.63  E-value: 1.81e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLF----MNPGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPL 78
Cdd:MTH00054 224 FALFFLAEYCHIILMSTFGVILFlggwLVISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPL 303

                         90       100
                 ....*....|....*....|
gi 256010102  79 TLALFLWHTSFPTTLSGLPP 98
Cdd:MTH00054 304 SLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-98 3.89e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 87.48  E-value: 3.89e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLFMNpGDLTQPDMFTIN---LMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLT 79
Cdd:MTH00216 229 FALFFLAEYAHIILMSCLTTILFLG-GWLSPIKYFKGGagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLS 307

                         90
                 ....*....|....*....
gi 256010102  80 LALFLWHTSFPTTLSGLPP 98
Cdd:MTH00216 308 LGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-85 4.85e-22

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 87.49  E-value: 4.85e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLF----MNPGDLTQPDMF--TINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFL 76
Cdd:COG1005  232 FALFFLAEYANMFLVSALATTLFlggwLGPFPILPLGGLpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLL 311


                 ....*....
gi 256010102  77 PLTLALFLW 85
Cdd:COG1005  312 PLSLVNLVL 320
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-89 3.61e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 82.01  E-value: 3.61e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPGDLTQPDMFtinlMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTL 80
Cdd:MTH00225 219 GGFALIFMAEYGSILFMSMLTSILFFGGFFVTIDLFL----ILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294


                 ....*....
gi 256010102  81 ALFLWHTSF 89
Cdd:MTH00225 295 AYLFMVLII 303
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
2-85 3.64e-20

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 82.16  E-value: 3.64e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   2 PFALFFLAEYANIMMMNTLTCTLFMN----PGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLP 77
Cdd:PRK06076 231 KFGLFFLGEYINMILVSALITTLFLGgwlpPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLP 310


                 ....*...
gi 256010102  78 LTLALFLW 85
Cdd:PRK06076 311 LSLVNLLL 318
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-89 6.98e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 81.35  E-value: 6.98e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNPgdltqpDMFTINLMLKTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPLTL 80
Cdd:MTH00193 220 GGFALIFLAEYSSILFMSMLFVLMFLGG------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 293


                 ....*....
gi 256010102  81 ALFLWHTSF 89
Cdd:MTH00193 294 NYLLFFFGL 302
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-98 2.97e-18

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 77.36  E-value: 2.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLFMN-----------------PGDLTQPDMFTINLMLKTSVMTILFLWTRAAYPRFRYD 65
Cdd:MTH00029 229 FALFFLAEYSNIILMSCMMTIFFLGgwlspldgiptppeafsIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYD 308

                         90       100       110
                 ....*....|....*....|....*....|...
gi 256010102  66 QLMHLLWKTFLPLTLALFLWHTSFPTTLSGLPP 98
Cdd:MTH00029 309 QLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 1-84 1.61e-15

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 69.42  E-value: 1.61e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   1 GPFALFFLAEYANIMMMNTLTCTLFMNpgdlTQPDMFTINLML--KTSVMTILFLWTRAAYPRFRYDQLMHLLWKTFLPL 78
Cdd:MTH00010 220 GLFALIFMAEYANILIMSLFTSVFFTS----FIPSIFISDLMLilKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPM 295


                 ....*.
gi 256010102  79 TLALFL 84
Cdd:MTH00010 296 SLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 3-84 9.27e-09

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 50.67  E-value: 9.27e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLFmnpgdltqpdmFTINLMLKTSVMTILfLWTRAAYPRFRYDQLMHLLWKTFLPLTLAL 82
Cdd:MTH00090 208 FVLLFLSEYGSLIFFSVLTSVLF-----------FKFSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIF 275


                 ..
gi 256010102  83 FL 84
Cdd:MTH00090 276 LG 277
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-89 2.86e-07

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 46.48  E-value: 2.86e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   3 FALFFLAEYANIMMMNTLTCTLFMNPGDLTQP-----DMFTINLMLKTSVMTI----------LFLW----TRAAYPRFR 63
Cdd:CHL00032 253 FGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPyifipELFEINKTGGVFGTTIgifitlaktyLFLFisitTRWTLPRLR 332

                         90       100
                 ....*....|....*....|....*.
gi 256010102  64 YDQLMHLLWKTFLPLTLALFLWHTSF 89
Cdd:CHL00032 333 MDQLLNLGWKFLLPISLGNLLLTTSF 358
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-84 1.15e-03

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 36.06  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256010102   2 PFALFFLAEYANIMMMNTLTCTLFMNPGDLTQPDMFTInlmlktsvmtILFLWTRAAYPRFRYDQLMHLLWKTFLPLTLA 81
Cdd:MTH00058 218 YFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFHL----------LFFMWARATLPRVRYDYFVNFFWEYCLVLLIL 287


                 ...
gi 256010102  82 LFL 84
Cdd:MTH00058 288 SLF 290
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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