|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
1.70e-141 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 411.08 E-value: 1.70e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWLIQNLLFFISLLYMININF-FSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVI 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLsFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 80 RYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMY 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 160 LYNNLNYLNFSLMYLGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTS 239
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 240 VGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANI 319
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 320 SYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYS 399
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420
....*....|....*....|....*..
gi 255959679 400 YSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFL 427
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
34-426 |
1.36e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 326.41 E-value: 1.36e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 34 LYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYF 113
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 114 FFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYL---GNFTNFYLYMSMILAF 190
Cdd:MTH00150 83 FFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSlrkLLSSMGLWGLLVFLAF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 191 LVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMK 270
Cdd:MTH00150 163 LVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 271 ALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLS 350
Cdd:MTH00150 243 SLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFC 322
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 255959679 351 SCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00150 323 IINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLL 398
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
1.04e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 320.00 E-value: 1.04e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWLIQNLLFFISLLYMININ--FFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSV 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSnsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 79 IRYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIM 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 159 YLYNNLNYLNFSLMYLGNFTNFYLY---MSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFE 235
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFlywIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 236 YMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFC 315
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 316 LANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTL 395
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430
....*....|....*....|....*....|.
gi 255959679 396 YLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILIL 431
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
7-426 |
5.01e-100 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 305.51 E-value: 5.01e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 7 YMVFLIPLCFLNKGWWLIQNLLFFISLLYMININFFS--WSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKFY 84
Cdd:MTH00014 9 ISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSapYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 85 NNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNL 164
Cdd:MTH00014 89 PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 165 NYLNFSLMYLGNFTNFYLYMS---MILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVG 241
Cdd:MTH00014 169 NSLSMLMSSMEPPSIYLMNLWwliTILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHIN 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 242 MIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISY 321
Cdd:MTH00014 249 KSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTY 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 322 ERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYSYS 401
Cdd:MTH00014 329 ETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTST 408
|
410 420
....*....|....*....|....*
gi 255959679 402 QHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00014 409 QHGSPPSFMNPLNLFTPRNHTLMTL 433
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-426 |
5.87e-94 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 290.34 E-value: 5.87e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWLI---QNLLFFISLLYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYS 77
Cdd:MTH00044 4 LILLSLGIAITSWIVPKNKLWPISisqSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASIN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 78 VIRYKFYNN--LFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLL 155
Cdd:MTH00044 84 HLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 156 GIMYLYNNLNYLNFSLMYLGNFTNFYLYMS------MILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG 229
Cdd:MTH00044 164 SLIAIYSSSSSLSIPLSELNWLTSLSSNSSsiwwifCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 230 LLRVFEYMTSVGMIF-NMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGL 308
Cdd:MTH00044 244 LIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 309 CSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISF 388
Cdd:MTH00044 324 VSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATV 403
|
410 420 430
....*....|....*....|....*....|....*...
gi 255959679 389 FSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00044 404 FGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFL 441
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
2.74e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 288.25 E-value: 2.74e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKgwwliQNLLFFISLLYMININFFS--WSNLSYM--------FGYDYLSYGLIMLSFWICIL 70
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSK-----PKFLWTNTTTYSLLIALLSlqWLKPPYYptknltqwLGIDQISAPLLVLSCWLLPL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 71 MIMASYSVIRYKFYNN--LFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMF 148
Cdd:MTH00124 76 MILASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 149 ASLPLLLGIMYLYNNLNYLNFSLMYL------GNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVL 222
Cdd:MTH00124 156 SSLPLLIAILYLHNQTGTLSLPMLQLthptltNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAIL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 223 LKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVL 302
Cdd:MTH00124 236 LKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 303 MIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLF 382
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 255959679 383 LMMISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTL 439
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-426 |
7.60e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 274.12 E-value: 7.60e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 5 IFYMVFLIPLCFLNKGWWLIQNLLFFISLLYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYK-- 82
Cdd:MTH00206 9 LLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEpi 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 83 FYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYN 162
Cdd:MTH00206 89 NRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 163 NLNYLNFSLMYLG---NFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTS 239
Cdd:MTH00206 169 SLGSLSLYILYFSkltTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 240 VGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANI 319
Cdd:MTH00206 249 STKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 320 SYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYS 399
Cdd:MTH00206 329 LYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFV 408
|
410 420
....*....|....*....|....*..
gi 255959679 400 YSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00206 409 MTQHGKTPNHLLSLSPSSTREHLLLFL 435
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
7.22e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 271.79 E-value: 7.22e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWLIQNLL---FFISLLYMINinFFSWSNLSYM----FGYDYLSYGLIMLSFWICILMIM 73
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTtnsLIIAFLSLMW--FNLPSETMNFtnkyFGIDQISSPLLILTCWLLPLMIL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 74 ASYSVIRYKFYNN--LFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASL 151
Cdd:MTH00068 79 ASQNHLKNEPINRqrTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 152 PLLLGIMYLYNNLNYLNFSLMYLGNFTNFYLYMSMI------LAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKL 225
Cdd:MTH00068 159 PLLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIwwlaclLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 226 GGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIA 305
Cdd:MTH00068 239 GGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMIS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 306 HGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMM 385
Cdd:MTH00068 319 HGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGL 398
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 255959679 386 ISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00068 399 GTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLAL 439
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
2.20e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 268.30 E-value: 2.20e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWLIQNLL---FFISL--LYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMAS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTtysLLISLisLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 76 YSVIRYKFYNN--LFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPL 153
Cdd:MTH00110 81 QHHLSKEPLTRkkLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 154 LLGIMYLYNNLNYLNFSLMYLGN------FTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGG 227
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAqplpnsWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 228 YGLLRVFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHG 307
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 308 LCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMIS 387
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430
....*....|....*....|....*....|....*....
gi 255959679 388 FFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLML 426
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMAL 439
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
27-426 |
9.57e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 246.02 E-value: 9.57e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 27 LLFFISLLYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNN--LFLFMIIMLLLMLYCTFC 104
Cdd:MTH00127 33 LIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRqrMYITLLTSLQIFLILAFG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 105 SLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYL------YNNLNYLNFSLMYLGNFT 178
Cdd:MTH00127 113 ATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLqnstgtLSMLTLQYSQPLQLSSWA 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 179 NFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFL 258
Cdd:MTH00127 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIM 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 259 VSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNL 338
Cdd:MTH00127 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMI 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 339 MPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYC 418
Cdd:MTH00127 353 LPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
|
....*...
gi 255959679 419 REYLLLML 426
Cdd:MTH00127 433 REHLLMAL 440
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-398 |
1.40e-47 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 169.49 E-value: 1.40e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 46 NLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKfyNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFL 125
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 126 IFGWGYqPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYLGN-----FTNFYLYMSMILAFLVKMPMYLVH 200
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAaplplTAQLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 201 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSI-SLVGGFLVSLMCLRQVDMKALIAYSSVA 279
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAAlGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 280 HMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPS 359
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 255959679 360 LNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLY 398
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-387 |
8.36e-47 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 162.48 E-value: 8.36e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 105 SLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNF------SLMYLGNFT 178
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelskaLTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 179 NFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFL 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 259 VSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLA-NISYERLGSRSLLINKGLLN 337
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 255959679 338 LMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMIS 387
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
37-398 |
7.82e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.15 E-value: 7.82e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 37 ININFFSWSNLsyMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNNLFLFMIIMLLLMlyCTFCSLSMLSFYFFFE 116
Cdd:MTH00204 67 SPTLNFQWGPL--VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLI--GVFSVLDLLLFYILFE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 117 GSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLN---YLNFSLMYLGNFTNFYLYMSMILAFLVK 193
Cdd:MTH00204 143 GILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGttdYQILLNIKLPLSIQKWLLVGFFLSLAVK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 194 MPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKAL 272
Cdd:MTH00204 223 IPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 273 IAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSC 352
Cdd:MTH00204 303 IAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 255959679 353 NMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLY 398
Cdd:MTH00204 383 NMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-398 |
5.72e-42 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 154.59 E-value: 5.72e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 46 NLSYMFGYDYLSYGLIMLSFWICILMIMASYSVI--RYKFYNNLFLFMIIMLLLMlyctFCSLSMLSFYFFFEGSLIPTL 123
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEIkkRVKFYMAALLWLEGGVIGV----FAALDLLLFYVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 124 FLIFGWGYqPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMY-------LGNFTNFYLYMSMILAFLVKMPM 196
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIadllnlpLPPGVQYWLFLAFFIAFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 197 YLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVfeymtSVGM------IFNMFWLSISLVGGFLVSLMCLRQVDMK 270
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF-----SLPLfpdashEFAPIIITLGVIAIIYGALVALAQTDIK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 271 ALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLS 350
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFA 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 255959679 351 SCNMAAPPSLNLLGE----IGLFNSmVGWMWMVMLFLMMisfFSAAYTLYLY 398
Cdd:PRK05846 383 MASLGLPGTSGFVGEflilLGSFQV-NPVIAFIATTGLI---LAAVYSLWLY 430
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-425 |
1.23e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 153.67 E-value: 1.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 51 FGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNNLFLFMIIMLLLMlyCTFCSLSMLSFYFFFEGSLIPTLFLIFGWG 130
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLM--GVFTILDLVGFYILFEGILIPMFLIIGIWG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 131 YQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMY---LGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAH 207
Cdd:MTH00217 154 SREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAH 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 208 VEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVG 286
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 287 GLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEI 366
Cdd:MTH00217 314 GIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEF 393
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 255959679 367 GLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLM 425
Cdd:MTH00217 394 LSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLL 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-398 |
3.24e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 147.01 E-value: 3.24e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 46 NLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYkfYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFL 125
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWESIQK--RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 126 IFGWGyQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLnFSLMYLGN-----FTNFYLYMSMILAFLVKMPMYLVH 200
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGT-FDLLELLNlplpfGVQTWLFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 201 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVA 279
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 280 HMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPS 359
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 255959679 360 LNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLY 398
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
50-397 |
4.31e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 144.29 E-value: 4.31e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 50 MFGYDYLSYGLIMLSFWICILMIMASYSVIRYkfYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGW 129
Cdd:MTH00226 97 VFAVDGISIYFIILTGFIVPCSILISWHSVKY--LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 130 GYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYLGNF-----TNFYLYMSMILAFLVKMPMYLVHLWLP 204
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHvvseqTQKWIFLGIFLAMAVKIPIFPFHIWLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 205 KAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVG-MIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGL 283
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGaQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 284 AVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLL 363
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350
....*....|....*....|....*....|....
gi 255959679 364 GEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYL 397
Cdd:MTH00226 415 GEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-425 |
1.17e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 141.20 E-value: 1.17e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 26 NLLFFISLLYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNNLFLFMIIMLLLMLYCTFCS 105
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 106 LSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNlnylnFSLMYLGNFTNFYLYMS 185
Cdd:MTH00094 82 SNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFF-----FSLCYFDFFLSWEMFFI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 186 MILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVfeyMTSVGMIFNMFWLSISLVGGFLVSLMCLR 265
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSLLGMILSSFCCVF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 266 QVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALW 345
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 346 WFLLSSCNMAAPPSLNLLGEIGLFNSMVGWMWMVMLFLMMISFFSAAYTLYLYSYSQHGTYYSGMYSSVSGYCREYLLLM 425
Cdd:MTH00094 314 FSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMM 393
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
51-402 |
9.55e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 105.23 E-value: 9.55e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 51 FGYDYLSYGLIMLSFWICILMIMASYSVIRYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIfGWG 130
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV-ALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 131 YQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLM--YLGNFTNFYLYMSMIL---AFLVKMPMYLVHLWLPK 205
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaaRLAELDPGLLLAAFALllvGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 206 AHVEAPVSGSMILAGVLLKLGGYGLLRVFEYM--TSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGL 283
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 284 AVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLL 363
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 255959679 364 GEIGLFNSMV-GWMWMVMLFLMMISFFSAAYTLYLYSYSQ 402
Cdd:COG0651 391 SKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-340 |
1.14e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 100.11 E-value: 1.14e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 47 LSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYKfynNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLI 126
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 127 FGWGYQpERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYLGNFT-----NFYLYMSMILAFLVKMPMYLVHL 201
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSyplalELLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 202 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAH 280
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 281 MGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMP 340
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-337 |
1.06e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 97.08 E-value: 1.06e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 47 LSYMFGYDYLSYGLIML-SFWICILMIMASYSVIRYKFYNNLflfmIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFL 125
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLnSLLTLIAIYSSDESIQRPRFYYSL----LLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 126 IFGWGYQpERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYLGNF-----TNFYLYMSMILAFLVKMPMYLVH 200
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHtlplsTQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 201 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSI-SLVGGFLVSLMCLRQVDMKALIAYSSVA 279
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATwAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255959679 280 HMG---LAVGGLMTLNTWGFYMTfvlMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLN 337
Cdd:PRK06473 306 HMGyilLAAAAATPLSILAAVFQ---MISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-395 |
3.93e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 92.46 E-value: 3.93e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 47 LSYMFGYDYLSYGLIMLSFWICILMIMASYSViryKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLI 126
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 127 FGWGYQpERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLMYLGN---FTNFYL--YMSMILAFLVKMPMYLVHL 201
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAkdfGLGFQLlcYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 202 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAH 280
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 281 MGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSM-ALWwfllSSCNMAappS 359
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMfAMW----TACSLA---S 387
|
330 340 350
....*....|....*....|....*....|....*.
gi 255959679 360 LNLLGeiglfnsMVGWMWMVMLFLMMISffSAAYTL 395
Cdd:PRK02546 388 LALPG-------MSGFVAELMVFVGFAT--SDAYTL 414
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
16-426 |
6.22e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 88.06 E-value: 6.22e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 16 FLNKGWWLIQNLLFFISLLYMININFFSWSNL---SYMFGYDYLSYGLIMLSFWICILMIMASYSVIrykfyNNLFLFMI 92
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNnvfNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLL-----SGVSRFFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 93 IMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSLM 172
Cdd:MTH00062 78 FLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 173 YLGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSIS 252
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 253 LVGGFLVSlmcLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLIN 332
Cdd:MTH00062 238 SVFFLITA---CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 333 KGLLNLMPSMaLWWFLLSSCNMAA-PPSLNLLGEIGLFNSMVGwMWMVMLFLMMISFFSAAYTLYLYSysqHGTYYSGMY 411
Cdd:MTH00062 315 KSGINGSLVL-RVIVVFSFLSLCSfPPTIQFFCEVFLVSSSFG-VLVYLLFWCFYLFFGGLVPLILLG---HLLIRSESY 389
|
410
....*....|....*
gi 255959679 412 SSVSGYCREYLLLML 426
Cdd:MTH00062 390 ESINVSNYSYLFFLI 404
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
39-395 |
1.47e-17 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 84.61 E-value: 1.47e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 39 INFFswsNLSYMFGYDYLSYGLIMLSFWICILMIMASYSVIRYkfyNNLFLFmiimLLLMLYC----TFCSLSMLSFYFF 114
Cdd:CHL00011 71 INFF---DFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRN---SRLFYF----LMLAMYSgqigLFSSRDLLLFFIM 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 115 FEGSLIPTLFLIFGWGYQpERLQAGIYLLFYTMFASLPLLLGIMYLYNNLN-YLNFSLMYLGNFT-----NFYLYMSMIL 188
Cdd:CHL00011 141 WELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnEPTLNFETLANQSypvalEILFYIGFLI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 189 AFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQV 267
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 268 DMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMalwWF 347
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKI---FT 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 255959679 348 LLSSCNMAappSLNLLGeiglfnsMVGWMWMVMLFLMMISffSAAYTL 395
Cdd:CHL00011 377 MFSSFSMA---SLALPG-------MSGFVAELIVFFGIIT--SQKYLL 412
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
1.61e-14 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 69.48 E-value: 1.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGWWL------IQNLLFFISLLYMININFFSWSNLSYMFGYDYLSYGLIMLSFWICILMIMA 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstlYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 255959679 75 SYSVIRY--KFYNNLFLFMIIMLLLMLYCT 102
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
47-369 |
2.42e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 74.75 E-value: 2.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 47 LSYMFGYDYLSYGLIMLSfwiCILMIMASYSVIRYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLI 126
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 127 FGWGYQpERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNF-----SLMYLGNFTNFYLYMSMILAFLVKMPMYLVHL 201
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdydaiSTQNLSLNTQLILLTGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 202 WLPKAHVEAPVSGSM----ILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGflvSLMCLRQVDMKALIAYSS 277
Cdd:PRK07363 227 WLPDAYTEASPAVAIllggVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYG---ALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 278 VAHMG---LAVGGLMTLNTWGfymTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNM 354
Cdd:PRK07363 304 IGHMGyilVAAAAGTQLSLLG---AVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGM 380
|
330
....*....|....*
gi 255959679 355 AAPPSLNLLGEIGLF 369
Cdd:PRK07363 381 ASAGIPGLVGFVAEF 395
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-400 |
3.42e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.98 E-value: 3.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 51 FGYDYLSYGLIMLSFWICILMIMASYSVIRYKfyNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIfGWG 130
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHR--QTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 131 YQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYLNFSL---MYLGN---FTNFYLymsMILAFLVKMPMYLVHLWLP 204
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADlagALAENptvVTAFGF---VLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 205 KAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSISLVGGFLV----SLMCLRQVDMKALIAYSSVAH 280
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSmlvgSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 281 MGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSL 360
Cdd:PRK08375 307 MGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 255959679 361 NLLGEIGLFNSMVG-WMWMVMLFLMMISFFSAAYTLYLYSY 400
Cdd:PRK08375 387 GFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
11-374 |
2.63e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 58.97 E-value: 2.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 11 LIPLCFLNKGWWLIQNLLFFIS----LLYMININFFS-----------WSNLSYMFGYDYLSYGLIMLSFWICILMIMAS 75
Cdd:PRK08667 18 VIPLVFRHKRKRVWQSVLWLVIaialLLFAGSLQLFTgnpldiplwgiAPGLDITFHIDRLAAFFIILIGLVSLCVAIYS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 76 YSVIRYKFYN---NLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLP 152
Cdd:PRK08667 98 LGYNEHMSSNeraNLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 153 LLLGIMYLYNNLNYLNFSLMYLGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR 232
Cdd:PRK08667 178 LMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 233 VFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGL-----------AVGGLMTLNTWGFYMTFV 301
Cdd:PRK08667 258 FLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIilmgiglyvifGVYGLDTLALLALGGALF 337
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 255959679 302 LMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMVG 374
Cdd:PRK08667 338 HSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQ 410
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-365 |
3.74e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 58.40 E-value: 3.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 199 VHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVfeYMTSVGMIFNMF----WLSISLVGGFLVSLMCLRQVDMKALIA 274
Cdd:PRK06458 233 MHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY--YILIDAAIGSDFpgrlLLIFGLLSVLVAAFFLLRQRDIKRLFA 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 275 YSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMAlWWFLLSSCNM 354
Cdd:PRK06458 311 YSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG-WGLMLGALAI 389
|
170
....*....|..
gi 255959679 355 A-APPSLNLLGE 365
Cdd:PRK06458 390 AgMPPFGVFISE 401
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-399 |
1.19e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 53.82 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 186 MILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFE--YMTSVGMIFNMFWLSISL-----VGGFL 258
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYtiFGISPSLIDFRAALSPILiilgaVSAII 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 259 VSLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNL 338
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255959679 339 MPSMALWWFLLSSCNMAAPPSLNLLGEIGLFNSMvgwMWMVMLFLMMISFFSAAYTLYLYS 399
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNAL---LESGFYLPALVLLIASAISLVGYF 446
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
186-397 |
2.59e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.45 E-value: 2.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 186 MILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYM--TSVGMIFNMFWLSISLVGGFLVSLMC 263
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 264 LRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMA 343
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 255959679 344 LWWFLLSSCNMAAPPSLNLLGEIGLFNSMVGW-MWMVMLFLMMISFFSAAYTLYL 397
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGIsVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
82-361 |
1.46e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 50.52 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 82 KFYNNLFLFMIIMLLLMLyctfcSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLY 161
Cdd:PRK12646 111 RFYFYLTLFMFSMIGIVL-----SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLY 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 162 NNLNYLNFS--LMYLGNFTNFYLYMSMILAFLV----KMPMYLVHLWLPKAhVEAPVSGSMILAGVLLKLGGYGLLRVFE 235
Cdd:PRK12646 186 IMTGTNNITeiLGQADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 236 YMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGL-----AVGGLMTLNTWGFYMTFVLMIA----- 305
Cdd:PRK12646 265 PLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMimamvGIGGGYAQHQQDAIASIYVFVLfaalf 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 306 ----HGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALwWFLLSSCNMAAPPSLN 361
Cdd:PRK12646 345 hlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-323 |
1.74e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 49.95 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 88 FLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTlFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYNNLNYL 167
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 168 NFSLMYLGNFTNFYLymsMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMF 247
Cdd:PRK07234 175 AFSGLATADPEAFAL---IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIF 251
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 255959679 248 WLSISLVGgflvSLMCLRQVDMKALIAYSSVAHMGLAVGGLMtlnTWGFYmtfvlMIAHGLCSSGLFCLANISYER 323
Cdd:PRK07234 252 GVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPL---VGGLY-----ALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-395 |
2.34e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.81 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 57 SYGLIMLSF-WICILMIMASYSVIRYKFYNNLFLFMIIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIfGWGYQPER 135
Cdd:PRK06589 86 LIFLLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 136 LQAGIYLLFYTMFASLPLLL-GIMYLYNNLNYLNFSLMYLGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAHVEAPVSG 214
Cdd:PRK06589 165 LSGGYKYLKILMISALLLFLpAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 215 SMILAGVLLKLGGYGLLRVFEY---MTSVGMIFNMF-WLS-ISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLM 289
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFAEFnWLIfIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 290 TLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLF 369
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLIL 404
|
330 340 350
....*....|....*....|....*....|.
gi 255959679 370 -----NSMVGWMWMVMLFLMMISFFSAAYTL 395
Cdd:PRK06589 405 laaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-397 |
2.82e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.33 E-value: 2.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 82 KFYNNLFLFMIIMLLLMLyctfcSLSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGImyly 161
Cdd:PRK08376 122 KYYTLILLLELGMLGMAI-----TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGI---- 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 162 nnlnylnfSLMY--LGNFTNFYLYMSMIL---------------AFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLK 224
Cdd:PRK08376 193 --------ALLYgqYGTLNMAYLAVKMSEnptvvakialalfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQA 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 225 LGGYGLLRVFEYMTSVGMIFNMFWLSISL--VGGFLVSLMCLRQVDMKALIAYSSVAHMG---LAVG-GLMTLNTWGFYM 298
Cdd:PRK08376 265 GLYALARVLFSIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymlLGLGvGLAALGDPAMAS 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 299 T-FVLM-------IAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPsMALWWFLLSSCNMAAPPSLN------LLG 364
Cdd:PRK08376 345 YgEIALaggiyhiVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIY 423
|
330 340 350
....*....|....*....|....*....|....
gi 255959679 365 E-IGLFNSMVGWMWMVMLFLMMISFFSAAYTLYL 397
Cdd:PRK08376 424 EsSALFNPILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
185-383 |
3.70e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.91 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 185 SMILAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFEYMTSVGMIFNMFWLSI--SLVGGFLVSLM 262
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIimATLTVFFAELS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 263 CLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSM 342
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLT 370
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 255959679 343 ALWWFLLSSCNMAAPPSLNLLGEIGLFNSMV--GWMWMVMLFL 383
Cdd:PRK08377 371 ALALTIGALSTVGIPLFNVFWSKFRIILAGLsaGYTWPVALVL 413
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
200-395 |
1.14e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 44.65 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 200 HLWLPKAHVEA-PVS-----GSMILAGVLLKLggygllrVFEYMTSVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALI 273
Cdd:PRK12650 228 HFWLPEAMAAItPVSaflhaAAVVKAGIYLLL-------RFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLT 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 274 AYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPsMALWWFLLSSCN 353
Cdd:PRK12650 301 AYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALS 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 255959679 354 MAA-PPSLNLLGEIGLFNSMVG------WMWMVMLFLMMISFFSAAYTL 395
Cdd:PRK12650 380 MAAvPPLFGFVSKEGMLTAFLEapggnaGVVLLLVGAALGAVFTFAYSA 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
82-340 |
5.21e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.21 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 82 KFYNNLFLFMIIMLLLMLyctfcSLSMLSFYFFFEGSLIPTLFLIfgwGYQPER-------LQAgiylLFYTMFASLPLL 154
Cdd:PRK12647 96 RFYSYILLFMASMLGLVL-----SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 155 LGIMYLYNNLNYLNFSLMYLGN--FTNFYLYMSMILAFLV----KMPMYLVHLWLPKAhVEAPV-------SGSMILAGV 221
Cdd:PRK12647 164 AGLILLGNVTGTYSLSELLASGdvIREHPLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGI 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 222 LLKLGgygllrvfeyMTSVgMIFNMFW-LSISLVGG---FLVSLMCLRQVDMKALIAYSSVAHMGLAVgGLMTLNTWGFY 297
Cdd:PRK12647 243 YLLAR----------LNPV-LGGTPLWqTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLV-MLLGLGSELAI 310
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 255959679 298 MTFVL-MIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMP 340
Cdd:PRK12647 311 KAAVLfLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMP 354
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-394 |
5.75e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 42.03 E-value: 5.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 188 LAFLVKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVF-----EYMTSVGMIFNMFWLSISLVGGFLVSLM 262
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSVL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 263 CLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNLMPSM 342
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKI 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 255959679 343 ALWWFLLSSCNMAAPPSLNLLGEIGLFNSMV-GWMWMVMLFLMMISFFSAAYT 394
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-314 |
9.69e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 41.52 E-value: 9.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 1 MLSYIFYMVFLIPLCFLNKGW-WLIQNLLFFISLLYMININFFSW----SNLSYMFGYDYLSYGLIMLSFWICILMIMAS 75
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLLKKInEKIGVIGNALPLLFLIKLYFTLKvgtgEKLTLFFGGFKLTFTLTHLSWFFAMISLLVI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 76 YSVI--------RYKFYNNLFLfmiIMLLLMLYCTFCSLSMLSFYFFFEGSLIPTLFLIFgWGYQPERLQAGIYLLFYTM 147
Cdd:PRK08668 83 FSVAffmvsektKNDAYFNMFA---LMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 148 FASLpLLLGIMYLYNNLNYLNFS-----LMYLGNFTNFYLYMSMILAF-LVKMPMYLVHLWLPKAHVEAPVSGSMILAGV 221
Cdd:PRK08668 159 GAYA-MLYAIFLIYAKTGTFDFAdisqgLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 222 LLKLGGYGLLRVFEYMTSVGMIFNMFWLS--------ISLVGG---FLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLMT 290
Cdd:PRK08668 238 LSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfnyiLAWLGNisiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGL 317
|
330 340
....*....|....*....|....
gi 255959679 291 LNTWGFYMTFVLMIAHGLCSSGLF 314
Cdd:PRK08668 318 GTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
83-361 |
2.13e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 40.26 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 83 FYNNLFLFMIIMLLLMLyctfcslSMLSFYFFFEGSLIPTLFLIFGWGYQPERLQAGIYLLFYTMFASLPLLLGIMYLYN 162
Cdd:PRK06521 117 FFYNLFLASMVLVLLAD-------DAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLAR 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 163 NLNYLNFSLMYLGNFTNFYLYMSMILAFL---VKMPMYLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FEYMT 238
Cdd:PRK06521 190 ESGSYDFAAMRAAHLSPFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 239 SVGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGL---AVG--------GLMTLNTWGFYMTFVLMIAHG 307
Cdd:PRK06521 270 APGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIifvGLGlamvfiayGMPLLAALALTAALYHLLNHA 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 255959679 308 LCSSGLFCLANISYERLGSRSLLINKGLLNLMPSMAlWWFLLSSCNMAAPPSLN 361
Cdd:PRK06521 350 LFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
82-386 |
6.85e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 38.42 E-value: 6.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 82 KFYNNLFLFMIIMLLLMLyctfcSLSMLSFYFFFEGSLIPTLFLIfGWGYQPERLQAGIYLLFYTMFASLPLLLGI-MYL 160
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVY-----SSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAaTLF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 161 YNNLNYLNFSLMYLGNFTNFYLYMSMILAFLVKMPMYLVHLWLPKAhVEAPVSGSMIL-AGVLLKLGGYGLLRVFEYMTS 239
Cdd:PRK06525 188 LQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGP 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 240 VGMIFNMFWLSISLVGGFLVSLMCLRQVDMKALIAYSSVAHMGLAVGGLmTLNTWGFYMTFVLMIA----HGLCSSGLFC 315
Cdd:PRK06525 267 IPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGL-SLAILGSRLALEGSIAyifnHAFAKSLFFL 345
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 255959679 316 LAN-ISYErLGSRSLLINKGLLNLMPSMALWWFLLSSCNMAAPPSLNLLGEIGLFN-----SMVGWMWMVMLFLMMI 386
Cdd:PRK06525 346 VAGaLSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAagfelSVEYWILLPAMVLLLI 421
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
260-344 |
8.27e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 38.17 E-value: 8.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255959679 260 SLMCLRQVDMKALIAYSSVAHMGLAVGGLMTLNTWGFYMTFVLMIAHGLCSSGLF-CLANISYERLGSRSLLINKGLLNL 338
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARR 363
|
....*.
gi 255959679 339 MPSMAL 344
Cdd:COG1007 364 SPLLAL 369
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