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Conserved domains on  [gi|225194977|gb|ACN81989|]
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cytochrome b, partial (mitochondrion) [Trachemys scripta scripta]

Protein Classification

cytochrome b( domain architecture ID 11475906)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 680.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLG 371
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 680.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLG 371
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-357 3.83e-126

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 367.58  E-value: 3.83e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   3 NSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290   25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  83 LHIGRGLYYGSylYKE----TWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVD 158
Cdd:COG1290  105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 159 NATLTRFFTFH-FILPFAIMGLTLVHLLFLHETGSNNPTG----LNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFS 233
Cdd:COG1290  183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTL 311
Cdd:COG1290  263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 225194977 312 FWCLIANLLVLTWIGGQPVenPFITIGQVASILYFSTMLILIPAAG 357
Cdd:COG1290  341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-193 1.99e-98

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 290.04  E-value: 1.99e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284    6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSY--LYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVD 158
Cdd:cd00284   86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 225194977 159 NATLTRFFTFHFILPFAIMGLTLVHLLFLHETGSN 193
Cdd:cd00284  166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
5-191 5.05e-90

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 268.10  E-value: 5.05e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977    5 FIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   85 IGRGLYYG--SYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 225194977  163 TRFFTFHFILPFAIMGLTLVHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 245-326 6.44e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 51.34  E-value: 6.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQF-RPLTQTLFwcLIANLLVLt 323
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141


                  ...
gi 225194977  324 WIG 326
Cdd:TIGR01156 142 WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 680.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLG 371
CYTB MTH00131
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 657.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00131  14 ANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFIC 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00131  94 IYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNA 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00131 174 TLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDP 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00131 254 DNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVL 333

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00131 334 ILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAG 370
CYTB MTH00100
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 654.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00100  14 INHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFIC 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00100  94 LFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKA 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00100 174 TLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDP 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00100 254 DNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLL 333

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00100 334 TLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIAS 370
CYTB MTH00074
cytochrome b; Provisional
 1-357 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 645.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00074  15 INNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00074  95 IYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKA 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00074 175 TLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00074 255 DNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTL 334

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00074 335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTG 371
CYTB MTH00191
cytochrome b; Provisional
 1-354 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 619.62  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00191  11 VNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFIC 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00191  91 IYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNA 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00191 171 TLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDP 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00191 251 ENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFI 330

                        330       340       350
                 ....*....|....*....|....*....|....
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIP 354
Cdd:MTH00191 331 LLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
CYTB MTH00156
cytochrome b; Provisional
 1-352 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 601.00  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00156   4 INNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFIC 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00156  84 IYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00156 164 TLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDP 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00156 244 ENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVI 323

                        330       340       350
                 ....*....|....*....|....*....|..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLIL 352
Cdd:MTH00156 324 LLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-353 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 578.78  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00145  15 VNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00145  95 IYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNA 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00145 175 TLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00145 255 ENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFF 334

                        330       340       350
                 ....*....|....*....|....*....|...
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILI 353
Cdd:MTH00145 335 ILTWIGACPVEEPYETIGQVFTVLYFLFFLILP 367
CYTB MTH00034
cytochrome b; Validated
 1-357 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 570.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00034  14 LNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFIC 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00034  94 LYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNA 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00034 174 TLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDP 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00034 254 ENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFF 333

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00034 334 ILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLIS 370
CYTB MTH00016
cytochrome b; Validated
 1-354 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 546.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00016  15 MNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFIC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00016  95 LYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNA 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00016 175 TLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00016 255 ENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFL 334

                        330       340       350
                 ....*....|....*....|....*....|....
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFStMLILIP 354
Cdd:MTH00016 335 LLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINP 367
CYTB MTH00053
cytochrome b; Provisional
 1-357 3.88e-178

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 499.23  E-value: 3.88e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00053  15 VNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLC 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00053  95 VYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNA 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00053 175 TLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDA 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00053 255 ENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFF 334

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00053 335 LLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAG 371
CYTB MTH00022
cytochrome b; Validated
 1-357 1.53e-176

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 494.99  E-value: 1.53e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00022  13 VNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLC 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00022  93 LYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNA 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00022 173 TLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDP 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00022 253 ENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFI 332

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00022 333 LLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLG 369
CYTB MTH00224
cytochrome b; Provisional
 1-351 3.22e-174

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 489.05  E-value: 3.22e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00224  15 LNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLF 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00224  95 IYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNA 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00224 175 TLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDP 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00224 255 ENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWA 334

                        330       340       350
                 ....*....|....*....|....*....|.
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLI 351
Cdd:MTH00224 335 ILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
CYTB MTH00033
cytochrome b; Provisional
 3-357 1.13e-130

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 378.90  E-value: 1.13e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   3 NSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:MTH00033  13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  83 LHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATL 162
Cdd:MTH00033  93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 163 TRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFS--PNLLGDP 240
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 225194977 321 VLTWIGGQPV-ENPFITIGQVASILYFSTMLILIPAAG 357
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLG 370
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-357 3.83e-126

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 367.58  E-value: 3.83e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   3 NSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290   25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  83 LHIGRGLYYGSylYKE----TWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVD 158
Cdd:COG1290  105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 159 NATLTRFFTFH-FILPFAIMGLTLVHLLFLHETGSNNPTG----LNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFS 233
Cdd:COG1290  183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTL 311
Cdd:COG1290  263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 225194977 312 FWCLIANLLVLTWIGGQPVenPFITIGQVASILYFSTMLILIPAAG 357
Cdd:COG1290  341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
CYTB MTH00086
cytochrome b; Provisional
 1-352 2.90e-120

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 351.16  E-value: 2.90e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00086   3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00086  83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDlLGIILMLTLLLTLTLFSPNLLGDP 240
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDP 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSkqrTTQFRPLTQTLFWCLIANLL 320
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318

                        330       340       350
                 ....*....|....*....|....*....|..
gi 225194977 321 VLTWIGGQPVENPFITIGQVASILYFSTMLIL 352
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-193 1.99e-98

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 290.04  E-value: 1.99e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284    6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSY--LYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVD 158
Cdd:cd00284   86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 225194977 159 NATLTRFFTFHFILPFAIMGLTLVHLLFLHETGSN 193
Cdd:cd00284  166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 1-351 3.58e-90

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 274.55  E-value: 3.58e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   1 INNSFIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00046   5 IRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  81 IYLHIGRGLYYGSYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNA 160
Cdd:MTH00046  85 LFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 161 TLTRFFTFHFILPFAIMGLTLVHLLFLHETGSNNPTGLNSNI-DKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGD 239
Cdd:MTH00046 165 TLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLD 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 240 PDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVlALLLSILVLFLMPTLHTSkqrtTQFRPLTQTLFWCLIANL 319
Cdd:MTH00046 245 IEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-VLVLSFLFFLWVPTFNGS----SVYSVWRQVNFWLIVSLF 319

                        330       340       350
                 ....*....|....*....|....*....|..
gi 225194977 320 LVLTWIGGQPVENPFITIGQVASILYFSTMLI 351
Cdd:MTH00046 320 FSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
5-191 5.05e-90

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 268.10  E-value: 5.05e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977    5 FIDLPSPSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   85 IGRGLYYG--SYLYKETWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 225194977  163 TRFFTFHFILPFAIMGLTLVHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 194-341 7.15e-47

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 156.27  E-value: 7.15e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 194 NPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 273
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 225194977 274 KLGGVLALLLSILVLFLMPTLHTSKQRtTQFRPLTQTLFWCLIANLLVLTWIGGQPVENPFITIGQVA 341
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
75-240 9.12e-47

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 156.63  E-value: 9.12e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977   75 SLFFMCIYLHIGRGLYYGSYLYKE--TWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIW 152
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  153 GGFSVDNATLTRFFTFHF-ILPFAIMGLTLVHLLFLHETGSNNPTGLNSNIDKIPFHPYFSYKDLLGIILMLTLLLTLTL 231
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 225194977  232 FSPNLLGDP 240
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 20-195 8.73e-43

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 147.94  E-value: 8.73e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  20 FGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGLYYGSYLYKE- 98
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  99 -TWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTFH-FILPFAI 176
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                        170
                 ....*....|....*....
gi 225194977 177 MGLTLVHLLFLHETGSNNP 195
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
245-345 1.51e-38

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 132.99  E-value: 1.51e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQFRPLTQTLFWCLIANLLVLTW 324
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 225194977  325 IGGQPVENPFITIGQVASILY 345
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
petB CHL00070
cytochrome b6
 11-195 3.98e-37

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 132.92  E-value: 3.98e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  11 PSNISAWWNFGSLLGTCLILQILTGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGLY 90
Cdd:CHL00070  27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  91 YGSYLYKE--TWNTGIILLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTF 168
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                        170       180
                 ....*....|....*....|....*...
gi 225194977 169 H-FILPFAIMGLTLVHLLFLHETGSNNP 195
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 245-326 1.83e-08

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 53.26  E-value: 1.83e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQF-RPLTQTLFwclIANLLVLT 323
Cdd:COG5679   66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF---LFGTLVTL 142


                 ...
gi 225194977 324 WIG 326
Cdd:COG5679  143 WLG 145
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 245-326 6.44e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 51.34  E-value: 6.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQF-RPLTQTLFwcLIANLLVLt 323
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141


                  ...
gi 225194977  324 WIG 326
Cdd:TIGR01156 142 WLG 144
petD CHL00058
cytochrome b6/f complex subunit IV
 245-326 6.75e-08

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 51.54  E-value: 6.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225194977 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPTLHTSKQRTTQF-RPLTQTLFwclIANLLVLT 323
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVF---LIGTAVAL 141


                 ...
gi 225194977 324 WIG 326
Cdd:CHL00058 142 WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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