|
Name |
Accession |
Description |
Interval |
E-value |
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
1-497 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 914.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNWINFLNFHWRL 80
Cdd:CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 81 GIDGLSIGLILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR 160
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 161 LYAGTKFILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGE 240
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 241 AHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGI 320
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 321 GSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLI 400
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 401 FLGIVISHKYSFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDAGPREIFILICLIFPIIGIGIYPN 480
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
|
490
....*....|....*..
gi 223931109 481 SVLSLWNSKVNFILSKF 497
Cdd:CHL00011 481 FVLSLSVDKVEAILSNY 497
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-491 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 654.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLTTIVLLPISAGLVIPLFPTKGN-NIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNWINFLNFHWR 79
Cdd:PRK02546 3 LANFPWLTTIILFPIVAALLIPFIPDKGDgKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKR 159
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 160 RLYAGTKFILYTAGGSIFILMGALTMGFYGSNqLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHG 239
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDT-PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 240 EAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIG 319
Cdd:PRK02546 242 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 320 IGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFL 399
Cdd:PRK02546 322 IGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 400 IFLGIVISHKYSFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDM-DAGPREIFILICLIFPIIGIGIY 478
Cdd:PRK02546 402 VFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKLvDAEPREVFIIACLLVPIIGIGLY 481
|
490
....*....|...
gi 223931109 479 PNSVLSLWNSKVN 491
Cdd:PRK02546 482 PKLVTQSYDATTN 494
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-498 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 630.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 27 KGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWP 106
Cdd:PRK12561 2 KEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 107 VTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMG 186
Cdd:PRK12561 82 VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 187 FYGSNqLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINM 266
Cdd:PRK12561 162 LSGDT-FTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 267 ELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALF 346
Cdd:PRK12561 241 QMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 347 FLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSFNFKIVITIIEAIGI 426
Cdd:PRK12561 321 FLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGL 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 223931109 427 ILTPIYLLSMLRQVFYGyKFSKFLVFSDM--DAGPREIFILICLIFPIIGIGIYPNSVLSLWNSKVNFILSKFI 498
Cdd:PRK12561 401 ILTPIYLLSMLRRVFYG-PRSELLPALAVveDAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKTVALAAQLR 473
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
3-497 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 518.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 3 NFPWLTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFcYQFKFSNQLIQLNEDYNWINFLNFHWRLGI 82
Cdd:COG1008 2 GMPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 83 DGLSIGLILLTGFITTLATLAAWP-VTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRL 161
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 162 YAGTKFILYTAGGSIFILMGALTMGFYgSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEA 241
Cdd:COG1008 161 YAAIKFFLYTLAGSLLMLVAILALYFL-AGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 242 HYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG 321
Cdd:COG1008 240 PTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 322 SMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:COG1008 320 ALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 402 LGivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDagPREIFILICLIFPIIGIGIYPNS 481
Cdd:COG1008 400 LG-------AFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLN--PRELAVLAPLAALILLLGLYPQP 470
|
490
....*....|....*.
gi 223931109 482 VLSLWNSKVNFILSKF 497
Cdd:COG1008 471 LLDLIEPSVEALLARV 486
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-497 |
1.38e-154 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 449.00 E-value: 1.38e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFcYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGLS 86
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLL-FQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 87 IGLILLTGFITTLATLAAWP-VTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGT 165
Cdd:TIGR01972 80 LLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 166 KFILYTAGGSIFILMGALTMGFYGSnqLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYST 245
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILGLYFLGG--GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 246 CMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTN 325
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 326 LGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGiv 405
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLG-- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 406 ishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGyKFSKFLVFSDMDAGPREIFILICLIFPIIGIGIYPNSVLSL 485
Cdd:TIGR01972 396 -----SFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
|
490
....*....|..
gi 223931109 486 WNSKVNFILSKF 497
Cdd:TIGR01972 470 TEPSVNNLLSQV 481
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-497 |
4.79e-144 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 422.69 E-value: 4.79e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 2 NNFPWLTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFCyQFKFSNQLIQLNEDYNWINFLNFHWRLG 81
Cdd:PRK05846 1 MNWPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWI-GFDSSNAGFQFVEKHPWIPRFGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 82 IDGLSIGLILLTGFITTLATLAAW-PVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR 160
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 161 LYAGTKFILYTAGGSIFILMGALTMGFYGSNQL-TLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHG 239
Cdd:PRK05846 160 IYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATgTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 240 EAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIG 319
Cdd:PRK05846 240 QAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 320 IGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFL 399
Cdd:PRK05846 320 IFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 400 IFLGivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDAgpREIFILICLIFPIIGIGIYP 479
Cdd:PRK05846 400 ILLG-------SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNG--RELLILLPLVALLLLLGVYP 470
|
490
....*....|....*...
gi 223931109 480 NSVLSLWNSKVNFILSKF 497
Cdd:PRK05846 471 KPLLDVIHPSVENLLQWV 488
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-443 |
3.58e-97 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 302.39 E-value: 3.58e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVIPLFPTKGN-NIVRWYTLGICLLEFLLiSYVFCYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGL 85
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINgKLARSVALVIASVLLLL-SLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 86 SIGLILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGT 165
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 166 KFILYTAGGSIFILMGALTMGFYgSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYST 245
Cdd:PRK06473 161 KFLLYTAISGILILVSFLGLVWL-SGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 246 CMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTN 325
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 326 LGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGG---TAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFL 402
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGllnPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 223931109 403 GivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYG 443
Cdd:PRK06473 400 G-------SFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-403 |
6.60e-85 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 270.82 E-value: 6.60e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVIPLFPTK-GNNIVRWYTLGICLLEFLLISYVFcYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGL 85
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGNlPSARLRQITLVFAVLVLAWSLFLL-TQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 86 SIGLILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGT 165
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 166 KFILYTAGGSIFILMGALTMGFYgSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYST 245
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIVWL-SGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 246 CMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTN 325
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 326 LGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIY---MPKIFTMFSSFSMASLALPGMSGFVAEFLIFL 402
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
.
gi 223931109 403 G 403
Cdd:PRK07363 400 G 400
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-410 |
9.70e-69 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 226.18 E-value: 9.70e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLttIVLLPISAGLVIPLFPtKGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLnedYNWINFLNFHwrL 80
Cdd:COG0651 1 MSHLLIL--PVLLPLLAAALLLLLG-RRRRLQRALSLLASLALLALALALLLQVLAGGPLVYAL---GGWPAPFGIV--L 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 81 GIDGLSIGLILLTGFITTLATLAAWP---VTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGG 157
Cdd:COG0651 73 VADRLSALFLLLTALVALAVLLYSIGymrHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 158 KRRLYAGTKFILYTAGGSIFILMG-ALTMGFYGsnqlTLNLQNLCNKSYPIE--LEIILYLGFFIAYAVKLPIFPLHTWL 234
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGvGLLYGATG----TLNMADLAARLAELDpgLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 235 PDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPH-AHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHM 313
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 314 GFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSG 393
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410
....*....|....*..
gi 223931109 394 FVAEFLIFLGIVISHKY 410
Cdd:COG0651 389 FVSKWLLLQAALEAGAW 405
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-485 |
1.27e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 214.54 E-value: 1.27e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 6 WLTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLefLLISYVFCYQFKFSNQLIQLNEDYNWI--NFLNFHWR---L 80
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLA--ILFSTLVLWGAFDGEGQFQFINLIEWIisPTLNFQWGplvF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 81 GIDGLSIGLILLTGFITTLATLAAWPVTRN-PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKR 159
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKFlFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 160 -RLYAGTKFILYTAGGSIFILMGALTMGfygSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTH 238
Cdd:MTH00204 160 eKVRASYYFFFYTFAGSVFMLLGIFQLY---SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 239 GEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLI 318
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 319 GIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEF 398
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 399 LIFLGivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKfSKFLVFSdMDAGPREIFILICLIFPIIGIGIY 478
Cdd:MTH00204 397 FSLLA-------AFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGG-SNYLLFS-RDLNRRELLAILPLIIAIFLLGIV 467
|
....*..
gi 223931109 479 PNSVLSL 485
Cdd:MTH00204 468 PFIIIDL 474
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
80-493 |
1.41e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 214.15 E-value: 1.41e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAWPVTRN-PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK 158
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNSIKFlIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 159 R-RLYAGTKFILYTAGGSIFILMGALTMGfygSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDT 237
Cdd:MTH00217 156 EeKVQASYYFFFYTFIGSVFMLLGIFTLY---SYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 238 HGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVL 317
Cdd:MTH00217 233 HVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 318 IGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAE 397
Cdd:MTH00217 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 398 FLIFLGivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYkFSKFLVFSdMDAGPREIFILICLIFPIIGIGI 477
Cdd:MTH00217 393 FLSLLA-------AFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGA-PSKYLYFS-RDLNRREFYVLLPLVFLIYLMGI 463
|
410
....*....|....*.
gi 223931109 478 YPNSVLSLWNSKVNFI 493
Cdd:MTH00217 464 FPFIIIDVIKSSVIFQ 479
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
80-493 |
1.78e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 198.61 E-value: 1.78e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAW-PVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK 158
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 159 R-RLYAGTKFILYTAGGSIFILMGALTMGFYGSNQLTLNLQNlCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDT 237
Cdd:MTH00226 178 EeKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 238 HGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVL 317
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 318 IGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAE 397
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 398 FLIFLGivishkySFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSkfLVFSDMDAGPREIFILICLIFPIIGIGI 477
Cdd:MTH00226 417 YLSILS-------SFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGN--LITFARDVNRREFYITASMVFFAFLIGI 487
|
410
....*....|....*.
gi 223931109 478 YPNSVLSLWNSKVNFI 493
Cdd:MTH00226 488 YPIFILEVIQNSLFFL 503
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
80-412 |
2.70e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 174.64 E-value: 2.70e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAWP---VTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKsvkLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 157 GK-RRLYAGTKFILYTAGGSIFILMGALTMGF-YGSNQLTLnlqnLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWL 234
Cdd:MTH00150 100 YQpERLQAGMYMMLYTVGASLPLLLVILWMSSsYGSSFMLL----ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 235 PDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELlphaHLIFAPWIVLIGAIQI---VYAAFTSFSQRNLKRRIAYSSIS 311
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVF----SLSSSSFSIFLISLSLwggVLTSLICLRQSDVKSLIAYSSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 312 HMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYD--RTRTLFLdqMGGTAIYMPKIFTMFSSFSMASLALP 389
Cdd:MTH00150 252 HMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEkvHSRSLFL--SKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340
....*....|....*....|...
gi 223931109 390 GMSGFVAEFLIFLGIVISHKYSF 412
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFF 352
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
21-482 |
1.06e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 170.89 E-value: 1.06e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 21 IPLFPTKGNNIVRWYTLGICLLEFLLISYVFCYqfkfsnqlIQLNEDYNWINFLNFhwrLGIDGLSIGLILLT------G 94
Cdd:MTH00206 7 IMLLLMTILSKKKWLWRSTTFFSFLIALLFLLW--------FKWSSEVGWSFSNLY---LSYDPLSSPLVILScwllplM 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 95 FITTLATLAAWPVTRNpRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWG-GKRRLYAGTKFILYTAG 173
Cdd:MTH00206 76 FLASQNHMKNEPINRQ-RIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGnQKERLNAGYYFLFYTLI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 174 GSIFILMGALTMGFYGsnqLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGIL 253
Cdd:MTH00206 155 GSLPLLIALLFLQNSL---GSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 254 LKMGGYGIIRINMELLPHAHLIFAPWIVLiGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAIL 333
Cdd:MTH00206 232 LKLGGYGMMRIILILGPSTKLSSYFFIIL-GLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 334 QMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIvishkysFN 413
Cdd:MTH00206 311 LMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSL-------FS 383
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 223931109 414 FKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDagPREIFILICLIFPIIGIGIYPNSV 482
Cdd:MTH00206 384 WSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSS--TREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
36-483 |
6.66e-47 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 169.00 E-value: 6.66e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 36 TLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNwINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPV-----TRN 110
Cdd:MTH00044 14 TSWIVPKNKLWPISISQSSLISLLSLFLLNNHWS-SSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNN 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 111 PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGG-KRRLYAGTKFILYTAGGSIFILMGALTMGFYg 189
Cdd:MTH00044 93 QRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAqKERIQAGLYFLFYTLFGSLPLLISLIAIYSS- 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 190 SNQLTLNLQNLCN-KSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMel 268
Cdd:MTH00044 172 SSSLSIPLSELNWlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLIN-- 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 269 lphahLIFAPWIVLIGAIQIVY----AAFTS---FSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLI 341
Cdd:MTH00044 250 -----LFSLPSANNISFILIVFccwgALITSiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 342 GAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVishkysfNFKIVITII 421
Cdd:MTH00044 325 SSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSII-------SWSILSFPI 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223931109 422 EAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDagPREIFILICLIFPIIGIGIYPNSVL 483
Cdd:MTH00044 398 IGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPIS--SREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
61-400 |
2.74e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 164.60 E-value: 2.74e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 61 LIQLNEDYNWINFLNFHwrLGIDGLSIGLILLTGFITTLATLAAW------PVTRNpRLFYFLMLAMYSGQIGLFASQDI 134
Cdd:MTH00124 39 LQWLKPPYYPTKNLTQW--LGIDQISAPLLVLSCWLLPLMILASQnhlqhePLQRK-RTFLTTLILLQTFLILAFSATEL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 135 LLFFFMWELELIPVYLLLCIWGG-KRRLYAGTKFILYTAGGSIFILMGALTMgFYGSNQLTLNLQNLCNKSYPIEL-EII 212
Cdd:MTH00124 116 TLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLISSLPLLIAILYL-HNQTGTLSLPMLQLTHPTLTNSWtNLL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 213 LYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLI--GAIQivy 290
Cdd:MTH00124 195 LWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLAlwGALM--- 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 291 AAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRT--RTLFLDQmgGTA 368
Cdd:MTH00124 272 TSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERThsRTLLLTR--GLQ 349
|
330 340 350
....*....|....*....|....*....|..
gi 223931109 369 IYMPKIFTMFSSFSMASLALPGMSGFVAEFLI 400
Cdd:MTH00124 350 LLLPLMTTWWLLANLTNMALPPTINLMGELTI 381
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-485 |
7.51e-45 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 163.90 E-value: 7.51e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAWPVTR-NPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEhRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 159 RRLYAGTKFILYTAGGSIFILMG-ALTMGFYGsnqlTLNLQNLCNKSYPI-ELEIILYLgFFIAYAVKLPIFPLHTWLPD 236
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGvGLLYGVTG----TLNMADLAGALAENpTVVTAFGF-VLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 237 THGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPW---IVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHM 313
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 314 GFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPkifTMFSSFSMASLALPGM-- 391
Cdd:PRK08375 308 GYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP---LTAAAFAVASLSLIGVpp 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 392 -SGFVAEFLIFLGIVISHKYSFNFKIVitiieaIGIILTPIYLLSMLRQVFYGyKFSKFLVFSDMDAGPREIFILICLIF 470
Cdd:PRK08375 385 tSGFVSKWYLVVGAVEAGQWLVLAVLL------ASSLLALLYFLRIWYRAFFG-PPPPGSEAPKQEAPLGMLAPSLALAL 457
|
410
....*....|....*
gi 223931109 471 PIIGIGIYPNSVLSL 485
Cdd:PRK08375 458 LSLLLGIYAGPLLQL 472
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-412 |
2.55e-44 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 157.48 E-value: 2.55e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 131 SQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMGALTM-GFYGSNQLTlNLQNLCNKSYPIE 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMyNYTGTLSFD-ELSKALTGGLNSS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 209 LEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRInMELLPHAHLIFAPWIVLIGAIQI 288
Cdd:pfam00361 80 GLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRR-SLLYLPSSPFIQQILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 289 VYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAG-ISYDRTRTLFLDQMGGT 367
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYGGL 238
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 223931109 368 AIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSF 412
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
41-405 |
1.03e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 159.93 E-value: 1.03e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 41 LLEFLLISYVFCYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPVTRN---PRLFYFL 117
Cdd:MTH00163 13 PLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKnnySNLFLFL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 118 MLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMGALtmgFYGSNQLTLN 196
Cdd:MTH00163 93 ILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIF---YLYNNSGSLS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 197 LQNLCNKSYpieLEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRInMELLPHAHLIF 276
Cdd:MTH00163 170 FFLLNFFGS---LNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 277 APWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRT 356
Cdd:MTH00163 246 NYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERL 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 223931109 357 --RTLFLDQmgGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIV 405
Cdd:MTH00163 326 gsRSLLINK--GLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLI 374
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
61-401 |
1.06e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 157.77 E-value: 1.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 61 LIQLNEDYNWINFLNFHwrLGIDGLSIGLILLTGFITTLATLAAW------PVTRNpRLFYFLMLAMYSGQIGLFASQDI 134
Cdd:MTH00068 39 LMWFNLPSETMNFTNKY--FGIDQISSPLLILTCWLLPLMILASQnhlknePINRQ-RTYISMLIILQLTLILAFSATEL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 135 LLFFFMWELELIPVYLLLCIWGG-KRRLYAGTKFILYTAGGSIfILMGALTMGFYGSNQLTLNLQNLCNKSYPIE-LEII 212
Cdd:MTH00068 116 ILFYIFFEATLIPTLIIITRWGNqEERLNAGTYFLFYTLAGSL-PLLIALLILQNSLGSLSLILLELMSPMQLMTyTNKI 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 213 LYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLiGAIQIVYAA 292
Cdd:MTH00068 195 WWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIIL-ALWGVLMTS 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 293 FTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRT--RTLFLdqMGGTAIY 370
Cdd:MTH00068 274 LICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERThsRTLLL--LRGAQTI 351
|
330 340 350
....*....|....*....|....*....|.
gi 223931109 371 MPKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:MTH00068 352 LPLMATWWLLSNLSNMALPPSPNLWGELTIM 382
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-400 |
2.48e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 153.96 E-value: 2.48e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLA------AWPVTRNpRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLC 153
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILAsqnhtaPEPINRQ-RMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 154 IWGGK-RRLYAGTKFILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHT 232
Cdd:MTH00127 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 233 WLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLiGAIQIVYAAFTSFSQRNLKRRIAYSSISH 312
Cdd:MTH00127 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 313 MGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMS 392
Cdd:MTH00127 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLP 374
|
....*...
gi 223931109 393 GFVAEFLI 400
Cdd:MTH00127 375 NLMGELMI 382
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
39-412 |
3.76e-39 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 147.58 E-value: 3.76e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 39 ICLLEFLLISYVFCYQFKFSNQLIQ-----LNEDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPVTRN--- 110
Cdd:MTH00014 9 ISLLLLPLIKYPWSWALTFSTLLLLslftlLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNnka 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 111 PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMGALTMgFYG 189
Cdd:MTH00014 89 PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQpERLQASFYLMIYTVTASLPLLMSILLI-FYT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 190 SNQLTLNLQNLCNKS-YPIELEIILYLGffiAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINmEL 268
Cdd:MTH00014 168 NNSLSMLMSSMEPPSiYLMNLWWLITIL---AFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMS-SL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 269 LPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFL 348
Cdd:MTH00014 244 FMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL 323
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 223931109 349 AGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSF 412
Cdd:MTH00014 324 ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTA 387
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
45-412 |
1.57e-36 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 140.50 E-value: 1.57e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 45 LLISYVFCYQFKFSNQLIqlnedYNWINFLnfhwrLGIDGLSIGLILLTGFITTLATLAAWPV---TRNPRLFYFLMLAM 121
Cdd:MTH00205 28 LLIGLFFSSFFFSNSFLM-----TSFISSS-----FSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIML 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 122 YSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMGALTMGFygsNQLTLNLQNL 200
Cdd:MTH00205 98 LLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQpERLQASMYMMMYTLCASLPLLIGLFFLNS---LNFSLSMFFN 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 201 CNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLphahLIFAPWI 280
Cdd:MTH00205 175 FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLY----KLNSNFS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 281 VLIGAIQIVYAAFTSF---SQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTR 357
Cdd:MTH00205 251 ELFFSISLWGGVMTGMiclRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTN 330
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 223931109 358 TLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSF 412
Cdd:MTH00205 331 SRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISG 385
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-401 |
4.34e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 140.49 E-value: 4.34e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 10 IVLLPISAGLVIPLFP--TKGN-NIVRWYTLGICLLefLLISYVFCYQFKFSNQLIQLNEDYNWINflNFHWRLGIDGLS 86
Cdd:PRK12667 9 TPILLVLFAFLLPLLSilLKGNrKIQKIYALLVSLI--TLILSILLFIQVYSSNKPIVYLFGGWPA--PIGIVYEVDLLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 87 IGLILLTGFITTLATLAAWPVTRN---PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR-LY 162
Cdd:PRK12667 85 ALLGLLTALVMFLILIYSYWYLEHesgPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDaVE 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 163 AGTKFILYTA-GGSIFILMGALTMGFYGsnqlTLNLQNLCNKS--------------YPIELEIILYLgFFIAYAVKLPI 227
Cdd:PRK12667 165 AAIKYALIGAvGTTLYFLALAFLYATFG----TLNMADLSAKIrglsfpltgglagnPPLALGVALAL-ALWAFTIKAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 228 FPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRI------NMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNL 301
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 302 KRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSF 381
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIG 399
|
410 420
....*....|....*....|
gi 223931109 382 SMASLALPGMSGFVAEFLIF 401
Cdd:PRK12667 400 ALSLVGIPPLNGFFSKLLLF 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
108-405 |
1.09e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 134.35 E-value: 1.09e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 108 TRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGF 187
Cdd:PRK08668 94 TKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAK 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 188 YGSNQLTLNLQNLCNKSypiELEIILYLGFFIAYA--VKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIrIN 265
Cdd:PRK08668 174 TGTFDFADISQGLINDT---STGFALIVFLFLLAFgvAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LV 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 266 MELLP-----------HAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQ 334
Cdd:PRK08668 250 LYVLPgtklfsefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFH 329
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223931109 335 MISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFsSFSMASLA-LPGMSGFVAEFLIFLGIV 405
Cdd:PRK08668 330 VFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMY-LVAIISLAgIPPMSGFASKWLIFEALI 400
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
72-437 |
8.03e-33 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 130.01 E-value: 8.03e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 72 NFLNFHWRLGIDGLSIGLILLTGFITTLATLAAW------PVTRNpRLFYFLMLAMYSGQIGLFASQDILLFFFMWELEL 145
Cdd:MTH00110 48 NSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQhhlskePLTRK-KLYITMLILLQLFLIMTFTATELIMFYILFEATL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 146 IPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMgALTmgfYGSNQL-TLNLQNLCNKSYPIELE---IILYLGFFIA 220
Cdd:MTH00110 127 IPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLV-ALL---YIQNNLgSLNFLLLQLWAQPLPNSwsnNLLWLACMMA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 221 YAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLI--GAIQivyAAFTSFSQ 298
Cdd:MTH00110 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSlwGMIM---TSSICLRQ 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 299 RNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRT--RTLFLDQmgGTAIYMPKIFT 376
Cdd:MTH00110 280 TDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMILAR--GLQTLLPLMAT 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223931109 377 MFSSFSMASLALPGMSGFVAEFLIflgIVISHKYSfNFKIVitiIEAIGIILTPIYLLSML 437
Cdd:MTH00110 358 WWLLASLTNLALPPTINLIGELFV---IMSSFSWS-NITII---LMGLNMLITALYSLYML 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-405 |
5.27e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 125.06 E-value: 5.27e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 11 VLLPISAGLVIPLFPtkgnNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQlnedynwinflNFHWRLGIDGLSIGLI 90
Cdd:PRK07234 9 IALPFLLGFAIYLLP----KLDRNLALGMAIVSAVYALGLVASMVPLELTLLD-----------NFGVTLRADALSGYFI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 91 LLTGFITTLATLAAWPVTRNpRLFYFLmLAMYSGQIGL-FASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFIL 169
Cdd:PRK07234 74 LTNALVTLAVIFYCWESAKT-RFFYAQ-LLILHGSVNAaFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 170 YTAGGSIFILMGALTMgfYGSNQlTLNLQNLCNKsyPIELEIILYLGFfiayAVKLPIFPLHTWLPDTHGEAHYSTCMLL 249
Cdd:PRK07234 152 YSNVAMLFYLIGAVLV--YQANG-TFAFSGLATA--DPEAFALIALGL----LVKGGIFVSGLWLPLTHSEAEPPVSALL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 250 AGILLKMGGYGIIRInmellphAHLIFAPW--IVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGigsmtnlG 327
Cdd:PRK07234 223 SGVVVKAGVFPLVRC-------ALDVPGLDliVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-------P 288
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 223931109 328 LNGAILQmISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPkiFTMfSSFSMAslALPGMSGFVAEFLIFLGIV 405
Cdd:PRK07234 289 LVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP--LTM-ASFSIA--GFPLLAGFVSKVLTLKNLL 360
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-443 |
1.16e-29 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 122.57 E-value: 1.16e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 6 WLTTIVLLPISAGLVIPLFPTK-GNNIVRWYTLGICLLEFLLISYVFcyqFKFSNQLIQLnEDYNWINFLNFHWRLG--I 82
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRlGRRAAGWLAALAPLAAFVLSLLLF---PAVLGGEVVV-ELYTWIPVGSLGLDFGfrL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 83 DGLSIGLILLTGFITTLATL-AAWPVTRNPRL--FYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKR 159
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIySIGYMSGDPGLarFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 160 R-LYAGTKFILYTAGGSIFILMGALTMGFY-GSNQLTLNLQNLCNKSYPIELEIILyLGFFIAYAVKLPIFPLHTWLPDT 237
Cdd:COG1009 159 SaRRAARKAFLVTRVGDLGLLLGILLLGAIaGTLNFSELLAAAPTILSSPLLTLIL-LLLLLGAFGKSAQFPLHFWLPDA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 238 HgEA--------HYSTcMLLAGILLkmggygIIRIN--MELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRNLKRRIAY 307
Cdd:COG1009 238 M-EGptpvsallHAAT-MVKAGVYL------LARLSplFALSPVWLTV----VAIIGAITALFAALIALAQTDIKRVLAY 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 308 SSISHMG--FVLIGIGSMTnlglnGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMF--SSFSM 383
Cdd:COG1009 306 STVSQLGymFLALGVGAYV-----AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFliGALSL 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 384 AslALPGMSGFVAEFLIFLGIVISHKYSfnfkIVITIIEAIGIILTPIYLLSMLRQVFYG 443
Cdd:COG1009 381 A--GIPPFAGFFSKEAILEAALEAGGLG----PLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
82-402 |
1.90e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 117.93 E-value: 1.90e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 82 IDGLSIGLILLTGFITTLATLAAWPVT-----------RNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYL 150
Cdd:PRK08676 61 IDHLGIFVVLIASVVFILAALYARGYVdhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAM 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 151 LLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGFYGSNQL---TLNLQNLCNKS--YPIELEIILYLGFFIAYAVKL 225
Cdd:PRK08676 141 LIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQALgtgTLNWTELAAHAslLSPSVLGASFLFIFIGFLAKS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 226 PIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELL-PHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRR 304
Cdd:PRK08676 221 GLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 305 IAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMA 384
Cdd:PRK08676 301 IAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAA 380
|
330
....*....|....*...
gi 223931109 385 SLALPGMSGFVAEFLIFL 402
Cdd:PRK08676 381 IIGMPPFPLFLSKFFILL 398
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-484 |
4.38e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 117.12 E-value: 4.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 114 FYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMG-ALTMGFYGsn 191
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGiALLYGQYG-- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 192 qlTLNLQNLCNK--SYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYS-TCMLLAgilLKMGG-YGIIRINME 267
Cdd:PRK08376 201 --TLNMAYLAVKmsENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSiSAMLLV---IKQAGlYALARVLFS 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 268 LL-PHAHLIFAPWIVLI-GAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG-SMTNLG-----------LNGAIL 333
Cdd:PRK08376 276 IYgPAINLATVGWVIIIlGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGvGLAALGdpamasygeiaLAGGIY 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 334 QMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFlgivishKYSFN 413
Cdd:PRK08376 356 HIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIY-------ESSAL 428
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223931109 414 FKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKflVFSDMDAGPREIFILICLIFPIIGIGIYPNSVLS 484
Cdd:PRK08376 429 FNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEK--VMNVKEPPKPMLVPMLILAIAIIGMGLFPWQISD 497
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-403 |
5.67e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 116.59 E-value: 5.67e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLTtiVLLPISAGLVIPLFPtKGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNedyNWInfLNFHWRL 80
Cdd:PRK07691 2 MNNLVILP--ILIPVITAILLIFLG-KRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELG---NWK--APFGIVF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 81 GIDGLSIGLILLTGFITTLATLAAWPVTRNPR---LFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGG 157
Cdd:PRK07691 74 VADMFAALLVLTSSIITFLVILYSFQTIGIEReryYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 158 KRRLYAGTKFILYTAGGSIFILMGaltMGFYGSNQLTLNLQNLCNKSYPIELE-----IILYLGFFIAYAVKLPIFPLHT 232
Cdd:PRK07691 154 KIQLRESIKYVLINVVSSAFFVVA---VAILYSVVGTLNMADISVKIAELSAGqtgliTVVAILFLFVFATKAGLFPLYF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 233 WLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISH 312
Cdd:PRK07691 231 WLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 313 MGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFsSFSMASLA-LPGM 391
Cdd:PRK07691 311 VGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMF-FIAALSLAgIPPL 389
|
410
....*....|..
gi 223931109 392 SGFVAEFLIFLG 403
Cdd:PRK07691 390 SGFYGKFFIVEG 401
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-405 |
7.50e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 115.98 E-value: 7.50e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 10 IVLLPISAGLVIPLF-PTKGNNIVRWYTLGICLLEFLLISYVFCYQFK--FSNQLIqlnedynwinflnfhwrlgIDGLS 86
Cdd:COG1007 12 ILLLGALVLLLLDLFlPRRSRRLLAGLALLGLLLALALLLLALGGGTGtaFGGMFV-------------------VDGFA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 87 IGLILLTGFITTLATLAAWPVTRNPRL----FYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR-L 161
Cdd:COG1007 73 LFFKLLILLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRsS 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 162 YAGTKFILYTAGGSIFILMG-ALTMGFYGSNQLTLNLQNLcnkSYPIELEIILYLGF---FIAYAVKLPIFPLHTWLPDT 237
Cdd:COG1007 153 EAALKYFLLGALSSGFLLYGiSLLYGATGSLNLAGIAAAL---AAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 238 HGEAHYSTCMLLAGILlKMGGYGI-IRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFV 316
Cdd:COG1007 230 YEGAPTPVTAFLATAP-KIAAFAAlLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 317 LIGIGSMTNLGLNGAILQMISHGLIGAALF-FLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFsSFSMASLA-LPGMSGF 394
Cdd:COG1007 309 LLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAM-TIFLLSLAgIPPTAGF 387
|
410
....*....|.
gi 223931109 395 VAEFLIFLGIV 405
Cdd:COG1007 388 FGKFYVFSAAV 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-401 |
3.88e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 114.26 E-value: 3.88e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVipLFPTKGNNIVRWYTLGICLLEFLLISYVFCYQfkfsnqliqlnedYNWINFLNFHWRLGIDGLS 86
Cdd:PRK06458 7 FALLLLIPLLASLL--LFALRKRRLVATLNVLGITLTLILALWLVFTV-------------PDAGEIFAAGLWFFIDDLN 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 87 IGLILLTGFITTLATL----------AAWPVTRNPRLFYFLMLamysgQIGLFAsqdILLFF------FMW---ELELIP 147
Cdd:PRK06458 72 VFFLALIGVVGFLTSLysigymrhevEHGELSPVTLRLYYGMY-----QLFLFT---MLLALtsnnlgLMWvaiEATTLS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 148 VYLLLCIWGGKRRLYAGTK-FILYTAG------GSIFILMGALTMgfYGSNQLTLNLQNLCNKSYPIElEIILYLGF--- 217
Cdd:PRK06458 144 SALLVGIYRTRASLEAAWKyIIICSVGvafalfGTILVYANAATV--MGDGEMAILWTELLKHASLLD-PTLMKLAFvfl 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 218 FIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLI-GAIQIVYAAFTSF 296
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfGLLSVLVAAFFLL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 297 SQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFT 376
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
410 420
....*....|....*....|....*
gi 223931109 377 MFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-396 |
3.31e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 108.52 E-value: 3.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 116 FLMLAMysGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGS-IFILMGALTMGFYGsnqlT 194
Cdd:PRK12665 117 YLILVA--GVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSlLFLIGIALVYAATG----T 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 195 LNLQNLCNK--SYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHA 272
Cdd:PRK12665 191 LNMADLAVRldELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 273 HLifapWIVL--IGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAG 350
Cdd:PRK12665 271 GL----DTLLmvVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG 346
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 223931109 351 ISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVA 396
Cdd:PRK12665 347 LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIG 392
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-408 |
1.09e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.83 E-value: 1.09e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 10 IVLLPISAGLVIPLFPTKGNnivRWYTLGICLLEFLLISYVFCYQFkfsnqliqlnedynWINFLNFHWRLGIDGLSI-- 87
Cdd:PRK05777 16 ILLGAAVVLLLIDAFVRRHS---RRATLAVLALLLALVALLFVLGA--------------AGGGTAFGGMLVVDGFALfl 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 88 -GLILLTGFITTLATlAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR-LYAGT 165
Cdd:PRK05777 79 kGLILLASLLALLLA-RPYLEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRsLEAAI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 166 KFILYTAGGSIFILMG-ALTMGFYGSNQLTlNLQNLCNKSYPIELEIILYLGFFIA-YAVKLPIFPLHTWLPDTHGEAHY 243
Cdd:PRK05777 158 KYFVLGALASGFLLYGmSLLYGATGSLSFA-GIAKALADGSGNSLLLLFGLVFLLVgLAFKLSAVPFHMWTPDVYEGAPT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 244 STCMLLAGILlKMGGYGII-RINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGS 322
Cdd:PRK05777 237 PVTAFLATAP-KIAAFAVLlRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 323 MTNLGLNGAILQMISHGLIGAALF-FLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFsMASLA-LPGMSGFVAEFLI 400
Cdd:PRK05777 316 GTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIF-MLSLAgIPPTAGFWGKFYV 394
|
....*...
gi 223931109 401 FLGIVISH 408
Cdd:PRK05777 395 FEAAVEAG 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
70-401 |
3.35e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 106.35 E-value: 3.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 70 WINFLNFHWRLGIDGLSIGLILLTGFITtlATLAAWPVTRNPRLFYFLMLAMYSGQIGLF--------ASQDILLFFFMW 141
Cdd:PRK08667 63 WGIAPGLDITFHIDRLAAFFIILIGLVS--LCVAIYSLGYNEHMSSNERANLLSALTALFilsmlgvvASANTFSFLFFW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 142 EL-ELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGFY-GSNQLTLNlqnlcnkSYPIELEIILYLGFFI 219
Cdd:PRK08667 141 EImALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQtGSFELSPL-------GASAGILSLVFLLLFL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 220 AYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPhAHLIFAPWIVLIGAIQIVYAAFTSFSQR 299
Cdd:PRK08667 214 GFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLS-PELWWGVLILLAGSISALLGVIYALKEH 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 300 NLKRRIAYSSISHMGFVLIGIG-----------SMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTA 368
Cdd:PRK08667 293 DLKGLLAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLV 372
|
330 340 350
....*....|....*....|....*....|...
gi 223931109 369 IYMPKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:PRK08667 373 KLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
10-485 |
4.20e-24 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 105.23 E-value: 4.20e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 10 IVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEdyNWINFLNFHWRLG-IDGLSIG 88
Cdd:PRK08377 8 LIALPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAG--GWKPPVGINLYIGpFAALFVL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 89 LILLTGFITTLATLAAW---PVTRNPRLFYFLMLamysGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGT 165
Cdd:PRK08377 86 IIAIVSFIMSIFSLKAVevePIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASM 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 166 KFILYTAGGSIFILMG-ALTMGFYGSNQLtLNLQNLCNKSYPIELEIILYLGFFiAYAVKLPIFPLHTWLPDTHGEAHYS 244
Cdd:PRK08377 162 KYIVLGGIGSSFFLIGvALIYGATGTLNM-AHIAQLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAYQAAPHP 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 245 TCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLI-GAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSM 323
Cdd:PRK08377 240 ITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIImATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 324 TNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLG 403
Cdd:PRK08377 320 TQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 404 iVISHKYSFNFKIVitiieaigiiltpiyLLSMLRQVFYGYKFSKFLVFSDMDAGPREIF----ILICLIFPIIGIGIYP 479
Cdd:PRK08377 400 -GLSAGYTWPVALV---------------LGASVVEAVYYFRLIHTMWFKGEGERIRENAaigiILLLLAALIVVIGIYP 463
|
....*.
gi 223931109 480 NSVLSL 485
Cdd:PRK08377 464 TPFWEV 469
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
73-401 |
1.21e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 104.59 E-value: 1.21e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 73 FLNFHWRLgiDGLSIGLILLTGFITTLATLAAWPVTRN-----PRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIP 147
Cdd:PRK06521 71 FLPFHLRL--DALSAFFLLVISLLGAAASLYSLGYFREyegkgPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 148 VYLLLCIW---GGKRRlyAGTKFILYTAGGSI-----FILMGALTMGFYGSNQLTLNLQnlcnksyPIELEIILYLGFFI 219
Cdd:PRK06521 149 SWFLVIANhreAEIRR--AGFLYLLMAHAGALaillaFGLLARESGSYDFAAMRAAHLS-------PFWASLVFLLALFG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 220 AYAvKLPIFPLHTWLPDTHGEA--HYSTcmLLAGILLKMGGYGIIRINMELLpHAHLIFAPWIVL-IGAIQIVYAAFTSF 296
Cdd:PRK06521 220 FGA-KAGLVPLHVWLPRAHPAApsHVSA--LMSGVMLKVAIYGILRVVFDLL-GAPGWWWGVLVLaLGAISAVLGVLYAL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 297 SQRNLKRRIAYSSISHMGFVLIGIG-----------SMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMG 365
Cdd:PRK06521 296 AEHDLKRLLAYSTIENIGIIFVGLGlamvfiaygmpLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLG 375
|
330 340 350
....*....|....*....|....*....|....*.
gi 223931109 366 GTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
12-401 |
4.85e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.28 E-value: 4.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 12 LLPISAGLVIPLFPtkgNNIVRWYTLGICLLEFLLISYVfcyqfkfsnqliqLNEDYNWINFLNFHWRLG-IDGLSIGLI 90
Cdd:PRK12668 10 LVFIAGALLVPFLP---GRARKALLLLAPVLAVLAVLTV-------------PEGTYLTVTFLGFDLVLGrVDKLSRVFG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 91 LLTGFITTLATLAAWPVTRNprlfYFLMLAMY--SGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFI 168
Cdd:PRK12668 74 LIFGIMAFIGVIYALHVKDP----GQHVAALLyvGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 169 LYTAGGSIFILMGALTMGFY-GSNQLTlnlqnlcnkSYPIELEIILYLgFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCM 247
Cdd:PRK12668 150 LVHVLGGVLLLAGILLHYAEtGSFAFG---------AIAGLGGTAAWL-ILIGFGVNAAFPPLHAWLPDAYPEATVTGSV 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 248 LLAGILLKMGGYGIIRInmellphahliFAPWIVLI--GAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTN 325
Cdd:PRK12668 220 FLSAFTTKTAVYALARA-----------FPGTELLIyiGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTA 288
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 223931109 326 LGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPK--IFTMFSSFSMAslALPGMSGFVAEFLIF 401
Cdd:PRK12668 289 LAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLtaLFCLVGALSIS--AFPLFSGFVSKSMII 364
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
83-485 |
8.03e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 101.18 E-value: 8.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 83 DGLSIGLILLTGFITTLATLAAWPV--TRNPRLFYF-LMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKR 159
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYGFGDieHSGRRYGFPpFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 160 RLYAGTKFILYTAGGSIFILMG-ALTMGFYGsnqlTLNLQNLCNKSYPIELE---IILYLGFFIAYAVKLPIFPLHtWLP 235
Cdd:PRK12663 156 QLRGAIKYVVLNLIGSWLFLLGiGLLYGTFG----TLNMAHIAMRLNDMGDTatlTTIALLFLLAFGMKAALFPFM-WLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 236 DTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGF 315
Cdd:PRK12663 231 AAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGF 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 316 VLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFV 395
Cdd:PRK12663 311 ILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFW 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 396 AEFLIFLGIVISHKYsfnfkiVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFSDMDagPREIFILICLIFPIIGI 475
Cdd:PRK12663 391 GKVLLVQGALDNGAY------ILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIP--LYRKLPLSILAVVVIAM 462
|
410
....*....|
gi 223931109 476 GIYPNSVLSL 485
Cdd:PRK12663 463 GIAAEPLLNL 472
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-408 |
8.41e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.35 E-value: 8.41e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 80 LGIDGLSIGLILLTGFITTLATLAAW-------PVTRNPRlFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLL 152
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSVLYGIypnrkeiSVNKIPS-FYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLV 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 153 CIWGGKRRLYAGTKFILYTAGGSIFILMGaltMGFYGSNQLTLNLQNLCNKSYPIELEIILYLG---FFIAYAVKLPIFP 229
Cdd:PRK12662 151 AMGRDKKALVAAFEYLIIGTIGATFYLIG---IGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGvlfIMVGLFIKAALFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMEL----LPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRI 305
Cdd:PRK12662 228 FHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 306 AYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAG-ISYDRTRTLfLDQMGGTAIYMPKIFTMFSSFSMA 384
Cdd:PRK12662 308 AYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsISYHFGTTK-LEDCLNLWKSMPKITLAFVLLSLS 386
|
330 340
....*....|....*....|....
gi 223931109 385 SLALPGMSGFVAEFLIFLGIVISH 408
Cdd:PRK12662 387 LIGMPPTSGFVAKWYILDAFIKSN 410
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-479 |
8.84e-23 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 102.21 E-value: 8.84e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFCYQFkfSNQLIQlnEDYNWINFLNFHWRL 80
Cdd:PRK12649 1 MDSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPEVI--HGTIIT--GSISWLPSAGVEFSI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 81 GIDGLS---------IGLILLT---GFITTLATLaawpvtrnPRLFYFLMLAMYSgQIGLFASQDILLFFFMWELELIPV 148
Cdd:PRK12649 77 YADGLAvligliasgIGVIIMSysnGYMSHKEDL--------PRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 149 YLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMGALTMG-FYGSNQLTLNLQN--LCNKSYPIELEIILYLGFFIAYAVK 224
Cdd:PRK12649 148 FMLIGYWRHRpESVYGATKSLLITAGGGLFMFAGFLLLHvITGTYDIATILQDseLIENIKGHPLFLITLILIFIGAAAK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 225 LPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRInmellphaHLIFA---PWIVLI---GAIQIVYAAFTSFSQ 298
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARI--------HPIFSgteAWFILVsgtGMITMVLAGFLAFRQ 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 299 RNLKRRIAYSSISHMGFVLIGIGSMT----NLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKI 374
Cdd:PRK12649 300 TDIKAILAYSTISQLAYLMTMYGYTTyhepGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPIT 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 375 FTMFSSFSMASLALPGMSGFVAEFLIF-LGIVISHKYSFNFKIVITIIEAIGIILTPIYLLSMLRQVFYGYKFSKFLVFS 453
Cdd:PRK12649 380 FIVASIAALAMAGIPPLNGFLSKEMFYeTSVEMGALIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHH 459
|
490 500
....*....|....*....|....*.
gi 223931109 454 DMDAGPREIFILICLIFPIIGIGIYP 479
Cdd:PRK12649 460 IHEAPYVMLIPAAFLAGLVILFGLVP 485
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-402 |
4.93e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 98.74 E-value: 4.93e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAgLVIPLFPTKGNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNedynwiNFLNFHWRLGIDGLS 86
Cdd:PRK06589 13 LLSTLLVGALN-LTSPFATKKDSFIRNFLLITISIFFFGNILLIDLLFLKGIRAQFELM------DFGNYSIGLHLEPLG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 87 IGLILLTGFITTLATLAAW------PVTRNPRLFYFLMLAMYSGqIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR 160
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPkylainNIDSSSRFLFFFNLTILIG-VLIALSSDLFTMFVCYELLTISTAFLIGHTRNNIS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 161 LYAGTKFILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSYPIELEIIlylgfFIAYAVKLPIFPLHTWLPdTHGE 240
Cdd:PRK06589 165 LSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLM-----FIYGIAKTAIFPVHSWLP-AAMV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 241 AHYSTCMLL-AGILLKMGGYGIIRINMEL--LPHAHLIFA--PWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGF 315
Cdd:PRK06589 239 AHYPVSALLhAVIVVKTGLFCIYKILLYIfgLSYLQRIFAefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 316 VLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFV 395
Cdd:PRK06589 319 ALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFI 398
|
....*..
gi 223931109 396 AEFLIFL 402
Cdd:PRK06589 399 SKFLILL 405
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-403 |
3.40e-19 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 90.03 E-value: 3.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 106 PVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTM 185
Cdd:PRK06525 107 PVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 186 GFYGSNQLTLNLQNLcnksyPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRIN 265
Cdd:PRK06525 187 FLQTGTFALSALSGL-----HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 266 MELLPHAHLIFAPwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSM---TNLGLNGAILQMISHGLIG 342
Cdd:PRK06525 262 QSMGPIPHVIGYV-GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAK 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223931109 343 AALFFLAG-ISYDrTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLG 403
Cdd:PRK06525 341 SLFFLVAGaLSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAA 401
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
64-395 |
1.41e-18 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 89.33 E-value: 1.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 64 LNEDYNWI-----NFLNFHWRLGIDGLSIG---LILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDIL 135
Cdd:PRK12650 54 LTWSVTWIpdllgNGVDVNLALRADALSLFfalLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 136 LFFFMWELELIPVYLLLCIWGGKRRLYAgTKFILYTAGGSIFILMG-ALTMGFYGSNQLTLNLQNLCNKSYPIELEIIly 214
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAvAIAATQTGTTSLSGILHSDVWAEKPGLTTVV-- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 215 lGFFIAYAV--KLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINmellPHAHLIFAPWIVLI--GAIQIVY 290
Cdd:PRK12650 211 -AVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS----PVFHDVAVWNWLLIivGMITALM 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 291 AAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIY 370
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRR 365
|
330 340
....*....|....*....|....*..
gi 223931109 371 MPKIFTM--FSSFSMAslALPGMSGFV 395
Cdd:PRK12650 366 MPFTFVSvtIAALSMA--AVPPLFGFV 390
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-401 |
1.60e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 88.82 E-value: 1.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 66 EDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPVTRN----PRLFYFLMLAMYSgQIGLFASQDILLFFFMW 141
Cdd:PRK12647 46 GGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGhpdlGRFYSYILLFMAS-MLGLVLSDNLITLFVFW 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 142 ELELIPVYLLLCIWGGK---RRlyAGTKFILYTAGGSIFILMGALTMGFY-GSNQLTLNL-QNLCNKSYPIELEIILYLg 216
Cdd:PRK12647 125 ELTSITSFLLIGFNHEReaaRR--AALQALLVTGGGGLALLAGLILLGNVtGTYSLSELLaSGDVIREHPLYLAILLLV- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 217 fFIAYAVKLPIFPLHTWLPD-----THGEAH-YSTCMLLAGILLKMggygiiRINMELLPHAhlifaPW---IVLIGAIQ 287
Cdd:PRK12647 202 -LGGAFTKSAQFPFHFWLPNameapTPVSAYlHSATMVKAGIYLLA------RLNPVLGGTP-----LWqtiLPLFGGLT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 288 IVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGT 367
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
330 340 350
....*....|....*....|....*....|....*.
gi 223931109 368 AIYMPKIFT--MFSSFSMAslALPGMSGFVAEFLIF 401
Cdd:PRK12647 350 RRAMPITAAaaLLAALSMA--GLPPLFGFLAKELIY 383
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
129-414 |
2.25e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 83.80 E-value: 2.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 129 FASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAggsiFILMGALTMGFYGSNQLTLNLQNLCNKsypI 207
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAA----FFSFPFLFVYLKNFFFFSLCYFDFFLS---W 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 208 ELEIILYLGFFiayaVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRInmeLLPHAHLIFAPWIvLIGAIQ 287
Cdd:MTH00094 152 EMFFILSLSFM----MKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWI-IFSLLG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 288 IVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGT 367
Cdd:MTH00094 224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSF 303
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 223931109 368 AIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSFNF 414
Cdd:MTH00094 304 FSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFF 350
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
35-443 |
4.64e-17 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 84.42 E-value: 4.64e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 35 YTLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPVTRN---- 110
Cdd:PRK12646 29 YAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSrkdn 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 111 -PRLFYFLMLAMYSgQIGLFASQDILLFFFMWELELIPVYLLLCIW--GGKRRLYAGTKFILYTAGGsIFILMGALTM-G 186
Cdd:PRK12646 109 lPRFYFYLTLFMFS-MIGIVLSDNTILMYVFWELTSVSSFLLISYWynNGDSQFGAIQSFMITVFGG-LALLVGFIMLyI 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 187 FYGSNQLTLNLQ---NLCNKSYPIELEIILYLGFFIAYAVklpiFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIR 263
Cdd:PRK12646 187 MTGTNNITEILGqadHIKNHGLFIPMIFMFLLGAFTKSAQ----FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFR 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 264 INMELLPHAHLIFApwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFV--LIGIGSMTN------------LGLN 329
Cdd:PRK12646 263 FTPLLGLSNMYIYI--VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImaMVGIGGGYAqhqqdaiasiyvFVLF 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 330 GAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHK 409
Cdd:PRK12646 341 AALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQ 420
|
410 420 430
....*....|....*....|....*....|....*..
gi 223931109 410 ---YSFNFKIVITIIEAIGIILTPIYLLSMLRQVFYG 443
Cdd:PRK12646 421 lsqFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWG 457
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
7-443 |
1.78e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 82.33 E-value: 1.78e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVIPLFPTK-GNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEDYNWINF--LNFHWRLGID 83
Cdd:TIGR01974 3 IFLIVFLPLIGFLIAGLFGRRiGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVggFQVDFGLRLD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 84 GLSIGLILLTGFITTLATLAAWPVTR----NPRLFYFLMLAMYSgQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKR 159
Cdd:TIGR01974 83 GLSLTMLVVVTGVGSLVHIYSIGYMAhdegYSRFFAYLNLFTFS-MLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 160 RL-YAGTKFILYTAGGSIFILMG-ALTMGFYGsnqlTLNLQNLCNKSYPIELEIILYLG--FFIAYAVKLPIFPLHTWLP 235
Cdd:TIGR01974 162 SAnNAAIKAFVVNRVGDFGLLLGiFLIFWYFG----TLNFQEVFALAPGAFFSALTLICllLFIGAMGKSAQLPLHTWLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 236 D-----THGEA--HYSTcMLLAGILLkmggygIIRIN--MELLPHAHLifapWIVLIGAIQIVYAAFTSFSQRNLKRRIA 306
Cdd:TIGR01974 238 DamegpTPVSAliHAAT-MVTAGVYL------VARTSplFELSPTALY----LVTIIGAITALFAATVALVQNDIKRILA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 307 YSSISHMG--FVLIGIGsmtnlGLNGAILQMISHGLIGAALFFLAG---ISYDRTRTLFldQMGGTAIYMPKIFTMFSSF 381
Cdd:TIGR01974 307 YSTMSQLGymFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGsviHAMHHEQDIR--KMGGLRKKMPVTYITFLIG 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223931109 382 SMASLALPGMSGFVAEFLIFLGIVISHKYSFNFKIVitiieAIGIILTPIYLLSMLRQVFYG 443
Cdd:TIGR01974 380 SLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAG-----LIGAFLTAFYSFRLIFMVFHG 436
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-401 |
2.70e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 81.44 E-value: 2.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 83 DGLSIGLILLTGFITTLATLAA---WpVTRNPR---LFYFLMLamysGQIGLFASQDILLFFFMWELELIPVYLLLCIWG 156
Cdd:PRK12666 79 DRLSALMLLLTALLALAALLYAlagW-DRAGPHfhaLFQFQLM----GLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 157 GKRRLYAGTKFILYTAGGSIFILMGALTMgfYGSNQlTLNLQNLCNKSYPIE------LEIILYLgFFIAYAVKLPIFPL 230
Cdd:PRK12666 154 GRARVRAGLHYVAINLVASSLFLIGVGLI--YGVTG-TLNMADLAQRIAQLPaadralLEAGAAL-LLVVFLIKAAMWPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 231 HTWLPDTHGEAHYSTCMLLAgILLKMGGYGIIRINMELLPHA----HLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIA 306
Cdd:PRK12666 230 NFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEagasAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 307 YSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLA-------GISYDR---TRTLFLDQMG-----GTAIYM 371
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRlavTPELYDLDEEeeeevGVAIPA 388
|
330 340 350
....*....|....*....|....*....|...
gi 223931109 372 PKIFTMFsSFSMASLALPGM---SGFVAEFLIF 401
Cdd:PRK12666 389 TMALLGL-LFFICALALAGLpplSGFLGKFALL 420
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
114-483 |
6.19e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 79.99 E-value: 6.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 114 FYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRR-LYAGTKFILYTAGGSIFILMG-ALTMGFYGSN 191
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGiSLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 192 QLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPH 271
Cdd:TIGR01770 184 NFEDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 272 AHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALF--FLA 349
Cdd:TIGR01770 264 FSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgvLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 350 GISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKYSFNFKIVITIIEAIGIILT 429
Cdd:TIGR01770 344 LRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 223931109 430 PIyllsmlrQVFYGYKFSKFLVFSDMDAGprEIFILICLIFPIIGIGIYPNSVL 483
Cdd:TIGR01770 424 VV-------KVMYFDKPERRIPSNPQSKA--QSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
143-401 |
1.99e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 78.72 E-value: 1.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 143 LELIPVYLLLCIWGGKrrlyagtkfiLYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYA 222
Cdd:PRK08042 122 MALCAVFLTGNSKEGK----------LWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 223 VKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMeLLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLK 302
Cdd:PRK08042 192 LLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQ 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 303 RRIAYSSISHMGFVLIGIGS-----------MTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYM 371
Cdd:PRK08042 271 RLLAYHTLENIGIILLGLGAgvtgialeqpaLIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKM 350
|
250 260 270
....*....|....*....|....*....|
gi 223931109 372 PKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:PRK08042 351 PVISIAMLVGLMAMAALPPLNGFAGEWVIY 380
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
7-394 |
4.03e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 78.31 E-value: 4.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 7 LTTIVLLPISAGLVIPLFPTKGNNIVRWYTLGICLLEFLLIsyVFCYQFKFSNQLIQlnEDYNWINF--LNFHWRLgiDG 84
Cdd:PRK12648 3 LLLLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVLL--ALLYPAVAAGEVIR--AEIEWLPAlgLNLSLRL--DG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 85 LS---IGLILLTGFITTLatLAAWPVTRN---PRLFYFLMLAMYSgQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK 158
Cdd:PRK12648 77 LAwlfALLILGIGLLVVL--YARYYLSPAdpvPRFFSFLLLFMGA-MLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 159 RRLYAGTKFIL-YTAGGSIFILMGALTMG-FYGSNQLTLNLQN--------LcnksYPIELEIILyLGFFiayaVKLPIF 228
Cdd:PRK12648 154 ADARRGARMALtVTGAGGLALLAGVLLLGhIVGSYDLDVVLAAgdlirahpL----YPPALVLIL-LGAF----TKSAQF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 229 PLHTWLPdtHGEA---------HYSTcMLLAGILLkmggygIIRinmellphahliFAP---------WIV-LIGAIQIV 289
Cdd:PRK12648 225 PFHFWLP--HAMAaptpvsaylHSAT-MVKAGVFL------LAR------------LWPvlagteewfWIVgGAGLITLL 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 290 YAAFTSFSQRNLKRRIAYSSISHMGFV--LIGIGsmTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGT 367
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLItlLLGLG--SPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGL 361
|
410 420
....*....|....*....|....*....
gi 223931109 368 AIYMPKIFT--MFSSFSMAslALPGMSGF 394
Cdd:PRK12648 362 RRLMPITATlaMVAAAAMA--GVPLLNGF 388
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
39-401 |
5.56e-15 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 77.69 E-value: 5.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 39 ICLLEFLLISYVFCYQFKFSNQLIQLnEDYNWINFLNFHWRLGI--DGLSIGLILLTGFITTLATLAAWPVTRN----PR 112
Cdd:MTH00032 34 ICMGSSTLIALFLAYEVLINDAVVHI-ELYKWIESEIFITHIGLlyDTLSVTMLLVISSISTLVHIYSTSYMSDdphvPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 LFYFLMLAMYSGQIgLFASQDILLFFFMWELELIPVYLLLCIWGGKRRL-YAGTKFILYTAGGSIFILMG---------- 181
Cdd:MTH00032 113 FLCYLSLFTFLMMV-LVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGmvliyktigs 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 182 ----ALTMGFYGSNQLTLNLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMG 257
Cdd:MTH00032 192 ldflTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAG 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 258 GYGIIRIN--MELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGF--VLIGIGSMTNLGLngaiL 333
Cdd:MTH00032 272 VFLMIRSFplFEKAPLTLLI----ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYmvLIIGIEGSHNVGL----F 343
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 334 QMISHGLIGAALFFLAGISYDRTRTLFLD--QMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIF 401
Cdd:MTH00032 344 HLVNHAFFKALLFLSAGSVIHSTTVDEQDmrKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
5-480 |
8.95e-13 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 70.72 E-value: 8.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 5 PWLTTIVLLPISAGLVIPLFPTKGNNI-VRWYTLgicLLEFLLISYVFCYQFKFSNQLIqLNEDYNWINFLNFHWRLGID 83
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFLYKYFKRIhTGWFVL---PVPVVLFIYFLSLIPTTMSGNT-VMKTLPWIPSLGINFTLYVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 84 GLSIGLILLTGFITTLATLAA--WPVTRNPRL--FY-FLMLAMySGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK 158
Cdd:PRK12645 78 GLSLLFALLITGIGSLVVLYSiyYLSKKKEQLgnFYvYLLLFM-GAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 159 RR-LYAGTKFILYTAGGSI-----FILMGALTmGFYGSNQLTLNLQNLCNKSYPIELEIILYLGFFiayaVKLPIFPLHT 232
Cdd:PRK12645 157 EAsRYGAQKSMLITVFGGLsmlggFILLYIMT-GSFSIREMIANADEIQNSPLFIPAMILILLGAF----TKSAQFPFYI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 233 WLPD-----THGEAH-YSTCMLLAGIllkmggYGIIRinmeLLPhahlIFAP-----WIV-LIGAIQIVYAAFTSFSQRN 300
Cdd:PRK12645 232 WLPDameapTPVSAYlHSATMVKAGI------YLVAR----FTP----IFAGsqvwfWTVtLVGLITLFWGSLNAVKQTD 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 301 LKRRIAYSSISHMGFV--LIGIGSMT-----------NLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGT 367
Cdd:PRK12645 298 LKGILAFSTVSQLGLImsLLGIGAASlhyqgddskiyAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGL 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 368 AIYMPKIFT--MFSSFSMAslALPGMSGFVAEFLIFLGIV-ISHKYSFNFK---IVITIIEAIGIILTPIYLLSMLRQVF 441
Cdd:PRK12645 378 MTIMPITFTiaLIGALSMA--GLPPFNGFLSKEMFFESMLnATEANLFSLDtwgVLFPVIAWVASVFTFVYSIIFIFKTF 455
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 223931109 442 YG-YKFSKflvfsdMDAGPREIFILIcLIFPII------GIGIYPN 480
Cdd:PRK12645 456 FGkYKPEQ------LPKKAHEAPIGM-LISPIIlaslvvVFGLFPN 494
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-396 |
1.28e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 64.17 E-value: 1.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 63 QLNEDYNWINFLNFHWRLGIDGLSIGLILLTGFITTLATL--AAWPVTRNPRLFYF--LMLAMYSGQIGLFASQDILLFF 138
Cdd:PRK12644 53 APTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFaaELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 139 FMWELELIPVYLLLCIWGGKR--RLYAGTKFILYTAGGSI----FILMGALTMGFYGSNQLTLNLQnlcnkSYPIELEII 212
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAasRRAALQALLVTTAGGLAmlvgIIILGQAAGTYRLSELLADPPT-----GPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 213 LYLgffIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRinmeLLP-HAHLIFAPWIVLI-GAIQIVY 290
Cdd:PRK12644 208 LIL---VGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVAR----LAPgFADVPVWRPTVLVlGLATMLL 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 291 AAFTSFSQRNLKRRIAYSSISHMGF--VLIGIGSmTNLGLNGaiLQMI-SHGLIGAALFFLAGISYDRTRTLFLDQMGGT 367
Cdd:PRK12644 281 GGWRALRQHDLKLILAYGTVSQLGFltVLVGIGT-RDAALAG--LAMLlAHALFKAALFLVVGIIDHSTGTRDIRKLSGL 357
|
330 340 350
....*....|....*....|....*....|
gi 223931109 368 AIYMPKIFtMFSSFSMASLA-LPGMSGFVA 396
Cdd:PRK12644 358 GRRQPVLA-VVAALAAASMAgLPPLLGFVA 386
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
89-400 |
3.57e-10 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 61.97 E-value: 3.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 89 LILLTGFITTLATLAAWPVTRNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKF- 167
Cdd:PRK06277 77 IIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYm 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 168 ILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSY-PIELEIILYLGFFIAYAVKLPifPLHTWLPDTHGEAH-YST 245
Cdd:PRK06277 157 ILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTsPVIYGGLLLLIFGLLYGSGLP--PFHTIKSDIYAKAKpFGS 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 246 CMLLAGILLKMGGYGIIRINM----ELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG 321
Cdd:PRK06277 235 ALLQTFSKFVLVALMLVIFKLfgglSYFPSAQGV----LIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLA 310
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 223931109 322 SMTNLGLNGAILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLI 400
Cdd:PRK06277 311 LGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLML 389
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
109-338 |
4.20e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.10 E-value: 4.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 109 RNPRLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLY---------AGTKFILYTAGGSIFIL 179
Cdd:MTH00198 185 RGPRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppeSGLKYWILGAMSSGFYL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 180 MG-ALTMGFYGSNQLTLNLQNLCNKSYPIELE--IILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAgILLKM 256
Cdd:MTH00198 265 FGcALYFGFTGNEGMLGTILSATLETTNIELRqgSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKF 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 257 GGYgiirinmeLLPHAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMI 336
Cdd:MTH00198 344 TVY--------ILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAV 415
|
..
gi 223931109 337 SH 338
Cdd:MTH00198 416 TY 417
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
34-354 |
5.39e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 58.01 E-value: 5.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 34 WYTLGICLLEFLLISYVFCYQFkfsnqliQLNEDYNWINFLN-FHWRLGIDGLSIGLILLTGFITtLATLAAWPVTRNPR 112
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLY-------SSGVGCCILVVNNvFNGLFIFDSLSFYLILLVLFLG-LYSQVMFYNLLSGV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 LFYFLMLAMYSGqIGLFASQDILLFFFMWELELIP-VYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGfYGSN 191
Cdd:MTH00062 73 SRFFLFLSLIFS-ILCFCVNNSLLFWFFYELSIIPlLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLS-LVNG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 192 QLTLNLQNLCNKSYpieleIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPH 271
Cdd:MTH00062 151 SFNFSDWGSDDSVS-----LIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 272 AHLIFAPWIVLIGaiqiVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFLAGI 351
Cdd:MTH00062 226 SFLGYLFLCCLFS----VFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWC 301
|
...
gi 223931109 352 SYD 354
Cdd:MTH00062 302 FYE 304
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-394 |
2.23e-08 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 56.71 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 1 MNNFPWLttIVLLPISAGLVIPLFPTK-GNNIVRWYTLGICLLEFLLISYVFCYQFKFSNQLIQLNEdYNWINF--LNFH 77
Cdd:PRK06590 1 MMNLLWL--IVLLPLIGALILGLFGRRiGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTL-WTWISVgdFDVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 78 WRLGIDGLSIGLILLTGFITTLATLAAWPVTRN----PRLFYFLML---AMysgqIGLFASQDILLFFFMWELELIPVYL 150
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHdegyRRFFAYLNLftfSM----LMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 151 LLCIWGGKRRL-YAGTK----------------FILYTAGGSI---FILMGALTMGFYGSNQLTLnlqnlcnksypiele 210
Cdd:PRK06590 154 LIGFWYKKPSAgAAAMKafivnrvgdvglalgiFLLFAEFGSLnydEVFAAAPQFFGLGWSALTL--------------- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 211 IILYLgfFIAYAVKLPIFPLHTWLPD-----THGEA--HYSTcMLLAGILLkmggygIIRIN--MELLPHAHLifapWIV 281
Cdd:PRK06590 219 ICLLL--FIGAMGKSAQFPLHTWLPDamegpTPVSAliHAAT-MVTAGVYL------VARMSplFELSPEALL----FVA 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 282 LIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMG--FVLIGIGsmtnlGLNGAILQMISHGLIGAALFFLAG---ISYDRT 356
Cdd:PRK06590 286 IVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGymFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGsviHAMHHE 360
|
410 420 430
....*....|....*....|....*....|....*...
gi 223931109 357 RTLFldQMGGTAIYMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:PRK06590 361 QDIR--KMGGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
110-400 |
1.46e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.43 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 110 NPRLFYFLMLAMYSGQIGLFASQDillFFFMW---ELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMG 186
Cdd:MTH00200 2 SPLILPLFILSLGLGTLLTFSSSH---WFLIWlglEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 187 FYgSNQLTLNLQnlcnksypieLEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLaGILLKMGGYGI-IRIN 265
Cdd:MTH00200 79 WT-SGQWGISEM----------LGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLIL-STWQKLAPFALlIQLA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 266 MELLPHAHLIFAPWIVLIGAiqivyaaFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAAL 345
Cdd:MTH00200 147 PALNSNILLLLGLLSVLVGG-------WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLL 219
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 223931109 346 FFLAGISYDRTRTLFldqmggtaiYMPKIFTMFSSFSMASLA-LPGMSGFVAEFLI 400
Cdd:MTH00200 220 NLLNSTKINSLSSSK---------TKNPILSMLLGLTLLSLGgLPPLTGFFPKWLI 266
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
39-400 |
4.11e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.39 E-value: 4.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 39 ICLLEFLLISYVFCYQFKFSNQLIQLnEDYNWIN--FLNFHWRLGIDGLSIGLILLTGFITTLATLAAWPVTRN----PR 112
Cdd:MTH00020 34 SCLIISLSWSFLIFYEILFNSSTTYI-KLWRWLDsdLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGdphiPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 ------LFYFLMLAmysgqigLFASQDILLFFFMWELELIPVYLLLCIWGGKRRL-YAGTKFILYTAGGSIFILMGALTM 185
Cdd:MTH00020 113 fmsylsLFTFLMVV-------LVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAnKAAIKAMLVNRVGDIGLLLAMFLL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 186 -GFYGSNQL--TLNLQNLCNKSypiELEIILYLgFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGII 262
Cdd:MTH00020 186 wDRFGSLDFssVFNMVVSAPSS---DITLICLF-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLI 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 263 RIN--MELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG-SMTNLGLngaiLQMISHG 339
Cdd:MTH00020 262 RSSplFEQAPLALII----VTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGlSHYSISL----FHLMNHA 333
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223931109 340 LIGAALFFLAG-ISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLI 400
Cdd:MTH00020 334 FFKALLFLSAGsVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
135-394 |
8.53e-07 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 51.70 E-value: 8.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 135 LLFFFMWELELIPVYLLLCIWGGkrRLYAGT---KFILYTAGGSIFILmgaLTMGFYGSNQLTLNLQNLcnkSYPIELEI 211
Cdd:MTH00004 138 FQLFIGWEGVGIMSFLLIGWWSG--RAEANTaalQAIIYNRIGDIGLI---LSMAWLAMTLNTWEIQQL---FSPTQTPT 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 212 ILYLGFFIAYAVKLPIFPLHTWLPD-----THGEA--HYSTcMLLAGILLkmggygIIRIN--MELLPHAHLIfapwIVL 282
Cdd:MTH00004 210 LPLLGLILAATGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRTHplLQNNQTALTI----CLC 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 283 IGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVligigsMTNLGLNG---AILQMISHGLIGAALFFLAG--IsydrtR 357
Cdd:MTH00004 279 LGALTTLFAATCALTQNDIKKIIAFSTSSQLGLM------MVTIGLNQpqlAFLHISTHAFFKAMLFLCSGsiI-----H 347
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 223931109 358 TLFLDQ----MGGTAIYMPkiftMFSSF-SMASLALPGM---SGF 394
Cdd:MTH00004 348 NLNNEQdirkMGGLQKTLP----ITSSClTIGNLALMGTpflSGF 388
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-410 |
2.30e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 49.64 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 124 GQIGLFASQDILLFFFMWELELIPVYLLLCIWGGK-RRLYAGTKFILYTAGGSIFILMG-ALTMGFYGSNQLTLNLQNLC 201
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGcALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 202 NKSYPIELEI-ILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAgILLKMGGYGIIrinMELLPHAHLIFapwi 280
Cdd:MTH00196 85 SGQSFSSVSVpIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSIL---VSIGLNVNILL---- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 281 vLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHgLIGAALFFLAGISYDRTRTLF 360
Cdd:MTH00196 157 -IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKNLI 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 223931109 361 LdQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLIFLGIVISHKY 410
Cdd:MTH00196 235 I-EFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYY 283
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-318 |
2.50e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 49.78 E-value: 2.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 LFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILmgaLTMGFYGSNQ 192
Cdd:PRK06591 116 LFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLIL---IAIGFLLSIT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 193 LTLNLQNLCN--KSYPIELEIILYLGFFIAYAV-KLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIR-----I 264
Cdd:PRK06591 193 GSLNMTDIAAylQEHTNSRIITIAIGFFLIGAIlKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyiiI 272
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 223931109 265 NMELLPHAHLIFAPWIVLIGAIqivYAAFTSFSQRNLKRRIAYSSISHMGFVLI 318
Cdd:PRK06591 273 GYETIKTAITNFIRPIALATLI---IAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
112-394 |
4.12e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 49.25 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 112 RLFYFLMLaMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIW-GGKRRLYAGTKFILYTAGGSIFILMGALTM----G 186
Cdd:PRK07376 123 RFFAYLSL-FSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWyDRKGAADAAQKAFVVNRVGDFGLLLGILGLfwatG 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 187 FYGSNQLTLNLQNLCNK-SYPIELEIILYLGFFIAYAVKLPIFPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgg 258
Cdd:PRK07376 202 SFDFDGIADRLSELVSSgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFL---- 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 259 ygIIRIN--MELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGsmtnLGLNGA-ILQM 335
Cdd:PRK07376 277 --VARMYpvFEQFPAVMTV----IAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMG----CGAYSAgLFHL 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 223931109 336 ISHGLIGAALFFLAG---------ISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:PRK07376 347 MTHAYFKAMLFLGSGsvihgmeevVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
219-348 |
6.08e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 48.47 E-value: 6.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 219 IAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAgILLKMGGYGIIrinMELLPHAHLIfapwiVLIGAIQIVYAAFTSFSQ 298
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSIL---VQIGPVTNVV-----LICAVLSIIYGAIGALNQ 268
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 223931109 299 RNLKRRIAYSSISHMGFVLIGIGSMTNLGLNGAILQMISHGLIGAALFFL 348
Cdd:MTH00199 269 TKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI 318
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
211-322 |
8.92e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 8.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 211 IILYLGFFIayavKLPIFPLH--TWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMELLPHAHLIFAPWIVLIGAIQI 288
Cdd:PRK06459 162 ILASFGFII----KMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSI 237
|
90 100 110
....*....|....*....|....*....|....
gi 223931109 289 VYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGS 322
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAILVALGL 271
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
111-320 |
1.63e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 46.80 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 111 PRLFYFLMLAMYSGQIGLFASqDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGFYGS 190
Cdd:MTH00144 4 PSNLLFLFLMVMGTLLSLSSS-HWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 191 NQLtlnlqnlcnksypieleiiLYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILlkmggyGIIRINMELLP 270
Cdd:MTH00144 83 SWF-------------------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ------KVAPLFLLSNF 137
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 223931109 271 HAHLIFAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGI 320
Cdd:MTH00144 138 LDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAI 187
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
128-357 |
2.89e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 46.62 E-value: 2.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 128 LFASQDILLFFFMWELELIPVYLLLCIWGGKRR--LYAGTKFILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLcNKSY 205
Cdd:PRK08168 116 LVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFarLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHL-AAQG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 206 PIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILlKMGGYGIIRInMELLPHAHliFAPWI-VLIG 284
Cdd:PRK08168 195 ASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV-NLGGFVLIRF-APLLEQAP--PARWLlVLVG 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 223931109 285 AIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGsmtnLGLNG-AILQMISHGLIGAALFFLAGISYDRTR 357
Cdd:PRK08168 271 LATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECG----LGLYElALLHLVAHSLYKAHAFLSASEAVRDTR 340
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
228-400 |
6.24e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.49 E-value: 6.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 228 FPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINMEllphahlifAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAY 307
Cdd:PRK12664 161 FPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSG---------EEILLFLGIITAIYGIIFASLEQNIRRLLCY 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 308 SSISHMGFVLIGIGSMTNLGLNGA--ILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGG-TAIYMPKIFTMFSSFSMA 384
Cdd:PRK12664 232 NVVGQMGLLIIAIGFSGSSGVAIGilILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGlFKMSLEAMCCIIAILNMG 311
|
170
....*....|....*.
gi 223931109 385 slALPGMSGFVAEFLI 400
Cdd:PRK12664 312 --AFPGTAGFVSKSLI 325
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
276-400 |
1.30e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 44.37 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 276 FAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVligigsMTNLGLNG---AILQMISHGLIGAALFFLAG-I 351
Cdd:MTH00207 242 FNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVM------MASLGLGMpklALFHLITHALFKALLFVCAGsL 315
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 223931109 352 SYDRTRTLFLDQMGGTAIYMPkiFTMfSSFSMASLAL---PGMSGFVAEFLI 400
Cdd:MTH00207 316 IHSHHHSQDLRTMGNLTNQMP--LTT-SCLLIANLALcgsPFLSGFYSKDLI 364
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
212-321 |
1.81e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 44.19 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 212 ILYLGFFIAYAVKLPIFPLHTWLPD-----THGEA--HYSTcMLLAGILLkmggygIIRINmELLPHaHLIFAPWIVLIG 284
Cdd:MTH00208 237 ILLFGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------LIRTS-PLISN-SPWFLSLCLILG 307
|
90 100 110
....*....|....*....|....*....|....*..
gi 223931109 285 AIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG 321
Cdd:MTH00208 308 SLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIG 344
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
83-335 |
3.38e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.12 E-value: 3.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 83 DGLSI---GLILLTGFITTLATLAAWPVTRNP-RLFYFLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLlciwGG- 157
Cdd:PRK02504 77 DNLSIafrAIIALSTLVTLLMSWRYVEQSGTPlGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLL----TGy 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 158 ----KRRLYAGTKFILYTAGGSIFILMGA-LTMGF-YGSNQLTLNLQNLCNKSYPIeleIILYLGFFIA-YAVKLPIFPL 230
Cdd:PRK02504 153 mkrdPRSNEAALKYLLIGAASSAIFLYGSsLLYGLsGGSTQLSAIALALITSPSLG---LALALVFVIAgIAFKISAVPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 231 HTWLPDTHgEAHYSTCMLLAGILLKMGGYGI-IRINMELLP----HAHLIFAPWIVLIGAIQIVYAaftsFSQRNLKRRI 305
Cdd:PRK02504 230 HQWTPDVY-EGSPTPVVAFLSVGSKAAGFALaIRLLVTAFPsfdeQWKLLFTALAILSMVLGNVVA----LAQTSMKRML 304
|
250 260 270
....*....|....*....|....*....|
gi 223931109 306 AYSSISHMGFVLIGIGSMTNLGLNGAILQM 335
Cdd:PRK02504 305 AYSSIGQAGFVMIGLVAGTEAGYASMVFYL 334
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
228-372 |
8.04e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 42.19 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 228 FPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGGYGIIrinmELLPHAHLIfapwIVLIGAIQIVYAAFTSFSQRN 300
Cdd:CHL00025 244 FPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLF----IVIPYIMNL----ISLIGIITALLGATLALAQKD 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 301 LKRRIAYSSISHMGFVLI--GIGSMTnlglnGAILQMISHGLIGAALFF-----------LAGISYDRTRTLFLdqMGGT 367
Cdd:CHL00025 315 IKRGLAYSTMSQLGYMMLalGIGSYR-----AALFHLITHAYSKALLFLgsgsvihsmepIVGYSPDKSQNMVL--MGGL 387
|
....*
gi 223931109 368 AIYMP 372
Cdd:CHL00025 388 RKYMP 392
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
113-400 |
8.57e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 41.92 E-value: 8.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 LFYFLMlamysgqIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRL-YAGTKFILYTAGGSIFILMGALTM-GFYGS 190
Cdd:MTH00210 119 LFTFLM-------IVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKAnKAAIKAMLINRVGDIGLVLAMIMIlKEFGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 191 NQLTLNLQNLCNKSYPIELEIILYLgFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRiNMELLP 270
Cdd:MTH00210 192 LEFSTISSLLVTNINKESLTIICLL-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR-SGPLFE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 271 HAHLIFApWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSmtnLGLNGAILQMISHGLIGAALFFLAG 350
Cdd:MTH00210 270 GSPLALT-IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGI---SNYSTSLFHLMNHAFFKALLFLSAG 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 223931109 351 -ISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLI 400
Cdd:MTH00210 346 sVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLI 396
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
168-394 |
1.15e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 168 ILYTAGGSIFILMGALTMGFYGSNQLTLNLQNLCNKSYpieleiILYLGFFIAYAVKLPIFPLHTWLPDTHgEA------ 241
Cdd:MTH00211 167 VIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLT------LFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsa 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 242 --HYSTcMLLAGILLkmggygIIRINmELLPHAHLIFApWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVlig 319
Cdd:MTH00211 240 llHSST-MVVAGVFL------LIRLS-PLFQNNQLILG-AVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLM--- 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 320 igsMTNLGLNG---AILQMISHGLIGAALFFLAGISydrTRTLFLDQ----MGGTAIYMPKIFTMFSSFSMASLALPGMS 392
Cdd:MTH00211 308 ---MVTLGLNQpqlAFLHICTHAFFKAMLFMCSGSI---IHGLNNEQdirkMGGLSKNLPFTSSCLFLGSLALMGFPFLS 381
|
..
gi 223931109 393 GF 394
Cdd:MTH00211 382 GF 383
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
210-394 |
2.65e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 40.28 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 210 EIILYLGFFIAYAVKLPIFPLHTWLPD-----THGEA--HYSTcMLLAGILLkmggygIIRINmELLPHAHLIFAPWIVL 282
Cdd:MTH00066 206 STLPLLGLILAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRFH-PLLENNQTALTICLCL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 283 iGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIG-SMTNLglngAILQMISHGLIGAALFFLAG-ISYDRTRTLF 360
Cdd:MTH00066 278 -GALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGlNQPQL----AFFHICTHAFFKAMLFLCSGsIIHSLNDEQD 352
|
170 180 190
....*....|....*....|....*....|....
gi 223931109 361 LDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00066 353 IRKMGGLQKALPITTSCLTIGSLALTGTPFLAGF 386
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
113-408 |
3.01e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 39.66 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 113 LFYFLMLamysgqIGLFASQDILLFFFMW---ELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALTMGFyg 189
Cdd:MTH00197 2 LFLFIIF------GGVLFSLSSSNWFLVWigmELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 190 snqltlnlqnlcnksyPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAgILLKMGGYGIIRINMELl 269
Cdd:MTH00197 74 ----------------NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFNSSS- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 270 PHAHLIFAPWIVLIGAIQIvyaaftsFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGlngaILQMISHGLIGAALFFLa 349
Cdd:MTH00197 136 FMGLLICSVLSSLIGGIGG-------MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIF----MLYYLIYFVIMFMLFLF- 203
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 223931109 350 gISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMAslALPGMSGFVAEFLIFLGIVISH 408
Cdd:MTH00197 204 -LSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLG--GLPPLSGFFLKWLILTSLLSSN 259
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
228-394 |
3.55e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.89 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 228 FPLHTWLpDTHGEAHYSTCMLLAGILLKMGGYGIIRInMELLPHAHLIFAPWIVlIGAIQIVYAAFTSFSQRNLKRRIAY 307
Cdd:PRK07390 238 FPLHLWL-DEAMEGPNPASILRNSVVVATGAWVLIKL-QPVLALSPVALTVLIV-IGTVTAIGASLVAIAQIDIKRALSY 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 308 SSISHMGFVLIGIGsmtnLGLNG-AILQMISHGLIGAALFFLAGISYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASL 386
Cdd:PRK07390 315 STSAYLGLVFIAVG----LQQPDiALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
....*...
gi 223931109 387 ALPGMSGF 394
Cdd:PRK07390 391 ALLPLGGF 398
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-407 |
7.79e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 38.37 E-value: 7.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 116 FLMLAMYSGQIGLFASQDILLFFFMWELELIPVYLLLCIWGGKRRLYAGTKFILYTAGGSIFILMGALtmgfygsnqltL 195
Cdd:MTH00041 8 FLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGAL-----------I 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 196 NLQNLCNKSYPIELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGIIRINmellphaHLI 275
Cdd:MTH00041 77 QAWLSGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-------NLL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223931109 276 FAPWIVLIGAIQIVYAAFTSFSQRNLKRRIAYSSISHMGFVLIGIGSMTNLGlngaILQMISHGLIGAALFFLAGISYdr 355
Cdd:MTH00041 150 NSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNAS----IIMFLIYIIINTSIFLIGNNFS-- 223
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 223931109 356 TRTLFldqMGGTAIYMPKIFTMFSSFSMASLA-LPGMSGFVAEFLIFLGIVIS 407
Cdd:MTH00041 224 LSTLS---HLNKLSQLNPISAFLFILSILSLGgLPPLTGFLNKFISLYCLIQN 273
|
|
| |
