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Conserved domains on  [gi|222630606|gb|EEE62738|]
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hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02171 PLN02171
endoglucanase
 5-620 0e+00

endoglucanase


:

Pssm-ID: 215115 [Multi-domain]  Cd Length: 629  Bit Score: 1168.42  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   5 GGAHGAATLFGLLALASMVKLGFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYD 84
Cdd:PLN02171   1 MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  85 AGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMT 164
Cdd:PLN02171  81 AGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 165 TSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGD 244
Cdd:PLN02171 161 TDRQAYRIDPQNPGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 245 ELLWAAAWLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVC 324
Cdd:PLN02171 241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMC 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 325 SCVGKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNPR 404
Cdd:PLN02171 321 SCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGR-ALRCAAGNAAPSQLLAFAKSQVDYILGDNPR 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 405 GTSYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAA 484
Cdd:PLN02171 400 ATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPA 479

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 485 TYNNAPLLGVLARLAASCGGLKEEEYE-------QETATPVVNRTSSSSSLPATATAIGIEQNVTGTWARRRRTYYRYAV 557
Cdd:PLN02171 480 TYNNAPLLGVLARLAGGHGGYNQLLVVvpapsevAINRTPAPQRRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYST 559

                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 558 TVTNRSRgKTVRELHLGVSGLRGRLWGLEEARYGYVPPRWLPALRPGRSLR-VFQHSVEEIDLS 620
Cdd:PLN02171 560 TVTNRSA-KTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEfVYVHSASPADVW 622
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
656-894 5.36e-23

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 102.70  E-value: 5.36e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 656 WALSGMRTLKELDLSRCSKISDAGIKHIASIESLEKLhvsqTGLTDNGVMAISSLINLRLLDLGGVRFTD--KALRSLqv 733
Cdd:COG4886   62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNL----TELDLSGNEELSNLTNLESLDLSGNQLTDlpEELANL-- 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 734 lTQLEHLDIWGSEITNEGASvLIAFTSLSFLNISWTRVTCLPI----LPTLRCLNMSNCTIHSIcNGEFQVLIHLEKLII 809
Cdd:COG4886  136 -TNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQLTDLPEelgnLTNLKELDLSNNQITDL-PEPLGNLTNLEELDL 212

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 810 SAASFGNIDEVFSSIlpSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISdaIEYIANIGmNLKFLSLSNSEVTSQ 889
Cdd:COG4886  213 SGNQLTDLPEPLANL--TNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTD--LPPLANLT-NLKTLDLSNNQLTDL 287


                 ....*
gi 222630606 890 ALCVL 894
Cdd:COG4886  288 KLKEL 292
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 899-937 8.04e-03

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


:

Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 35.30  E-value: 8.04e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 222630606  899 PSLTTLSLAHTKIDDSALLyiSMMPSLRILNLSR-TCIKD 937
Cdd:pfam12799   1 PNLEVLDLSNNQITDIPPL--AKLPNLETLDLSGnNKITD 38
 
Name Accession Description Interval E-value
PLN02171 PLN02171
endoglucanase
 5-620 0e+00

endoglucanase


Pssm-ID: 215115 [Multi-domain]  Cd Length: 629  Bit Score: 1168.42  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   5 GGAHGAATLFGLLALASMVKLGFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYD 84
Cdd:PLN02171   1 MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  85 AGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMT 164
Cdd:PLN02171  81 AGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 165 TSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGD 244
Cdd:PLN02171 161 TDRQAYRIDPQNPGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 245 ELLWAAAWLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVC 324
Cdd:PLN02171 241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMC 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 325 SCVGKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNPR 404
Cdd:PLN02171 321 SCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGR-ALRCAAGNAAPSQLLAFAKSQVDYILGDNPR 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 405 GTSYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAA 484
Cdd:PLN02171 400 ATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPA 479

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 485 TYNNAPLLGVLARLAASCGGLKEEEYE-------QETATPVVNRTSSSSSLPATATAIGIEQNVTGTWARRRRTYYRYAV 557
Cdd:PLN02171 480 TYNNAPLLGVLARLAGGHGGYNQLLVVvpapsevAINRTPAPQRRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYST 559

                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 558 TVTNRSRgKTVRELHLGVSGLRGRLWGLEEARYGYVPPRWLPALRPGRSLR-VFQHSVEEIDLS 620
Cdd:PLN02171 560 TVTNRSA-KTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEfVYVHSASPADVW 622
Glyco_hydro_9 pfam00759
Glycosyl hydrolase family 9;
38-495 3.44e-165

Glycosyl hydrolase family 9;


Pssm-ID: 459928 [Multi-domain]  Cd Length: 376  Bit Score: 488.25  E-value: 3.44e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   38 ALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKAN------GVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGK 111
Cdd:pfam00759   2 ALQKSLLFFYAQRSGKLPDNNRVAWRGDSHLDDGAAAlsgddgGVDLSGGWYDAGDYVKFGVPMAFTVTMLLWAYEEFPD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  112 QMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAA 191
Cdd:pfam00759  82 AYKAAGDLDHILDELKWGLDYLLKMHPSDGVLYVQVGDGDADHKCWGPPEDMTTPRPVYKIDASNPGTDAAAETAAALAA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  192 ASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSfSGYGDELLWAAAWLFEATEDRSYLEYLAGNGE 271
Cdd:pfam00759 162 ASRVFKKSDPAYAAKLLAAAKQLYAFADTYRGYSDSIPAVGGGFYNS-SGYEDELLWAAAWLYKATGDSSYLDYAESYYS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  272 ALGGTGWSINQ--FGWDVKYPGvqvlaakfllqgragdhaaalqryrqnaeffvcscvgkgavnvartpggmmyhqrwnn 349
Cdd:pfam00759 241 ALGGTAFSSTGwgFSWDNKVAG---------------------------------------------------------- 262

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  350 lqFVTSASFLLTVYADFaaisgrgavhcpagAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVS 429
Cdd:pfam00759 263 --YAANAAFLLLVYADL--------------LGDPSKYRDFAKSQIDYLLGDNPLGMSYVVGYGENSPKNPHHRAASGSS 326

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 222630606  430 IKRDPsfvscqegysswygreAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVL 495
Cdd:pfam00759 327 RDASP----------------APNPNPLPGALVGGPNPDDSYVDDRNDYSTNEVAIDYNAPLVGAL 376
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
656-894 5.36e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 102.70  E-value: 5.36e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 656 WALSGMRTLKELDLSRCSKISDAGIKHIASIESLEKLhvsqTGLTDNGVMAISSLINLRLLDLGGVRFTD--KALRSLqv 733
Cdd:COG4886   62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNL----TELDLSGNEELSNLTNLESLDLSGNQLTDlpEELANL-- 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 734 lTQLEHLDIWGSEITNEGASvLIAFTSLSFLNISWTRVTCLPI----LPTLRCLNMSNCTIHSIcNGEFQVLIHLEKLII 809
Cdd:COG4886  136 -TNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQLTDLPEelgnLTNLKELDLSNNQITDL-PEPLGNLTNLEELDL 212

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 810 SAASFGNIDEVFSSIlpSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISdaIEYIANIGmNLKFLSLSNSEVTSQ 889
Cdd:COG4886  213 SGNQLTDLPEPLANL--TNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTD--LPPLANLT-NLKTLDLSNNQLTDL 287


                 ....*
gi 222630606 890 ALCVL 894
Cdd:COG4886  288 KLKEL 292
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 682-951 7.78e-11

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 64.68  E-value: 7.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 682 HIASIESLEKLHVSQTGLTDNGVMAISSLI---------NLRLLDLGG-VRFTDKALRSLQVLTQLEHLDIWGSEITNEG 751
Cdd:cd00116   18 LLPKLLCLQVLRLEGNTLGEEAAKALASALrpqpslkelCLSLNETGRiPRGLQSLLQGLTKGCGLQELDLSDNALGPDG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 752 ASVLIAFTSLSFLNIswtrvtclpilptlrcLNMSNCTIHS-----ICNGEFQVLIHLEKLI-----ISAASFGNIDEVF 821
Cdd:cd00116   98 CGVLESLLRSSSLQE----------------LKLNNNGLGDrglrlLAKGLKDLPPALEKLVlgrnrLEGASCEALAKAL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 822 SSIlpssltyldmsscsssnlyflgnmRNLEHLDLSYSRIISDAIEYIANIG---MNLKFLSLSNSEVTSQALCVLAGTV 898
Cdd:cd00116  162 RAN------------------------RDLKELNLANNGIGDAGIRALAEGLkanCNLEVLDLNNNGLTDEGASALAETL 217

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 899 PS---LTTLSLAHTKIDD---SALLYISMMP--SLRILNLSRTCIKDERIKYSKE---EMMELQ 951
Cdd:cd00116  218 ASlksLEVLNLGDNNLTDagaAALASALLSPniSLLTLSLSCNDITDDGAKDLAEvlaEKESLL 281
LRR_CC smart00367
Leucine-rich repeat - CC (cysteine-containing) subfamily;
664-685 5.66e-04

Leucine-rich repeat - CC (cysteine-containing) subfamily;


Pssm-ID: 197685 [Multi-domain]  Cd Length: 26  Bit Score: 37.77  E-value: 5.66e-04
                           10        20
                   ....*....|....*....|..
gi 222630606   664 LKELDLSRCSKISDAGIKHIAS 685
Cdd:smart00367   4 LRELDLSGCTNITDEGLQALAK 25
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 899-937 8.04e-03

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 35.30  E-value: 8.04e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 222630606  899 PSLTTLSLAHTKIDDSALLyiSMMPSLRILNLSR-TCIKD 937
Cdd:pfam12799   1 PNLEVLDLSNNQITDIPPL--AKLPNLETLDLSGnNKITD 38
 
Name Accession Description Interval E-value
PLN02171 PLN02171
endoglucanase
 5-620 0e+00

endoglucanase


Pssm-ID: 215115 [Multi-domain]  Cd Length: 629  Bit Score: 1168.42  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   5 GGAHGAATLFGLLALASMVKLGFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYD 84
Cdd:PLN02171   1 MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  85 AGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMT 164
Cdd:PLN02171  81 AGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 165 TSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGD 244
Cdd:PLN02171 161 TDRQAYRIDPQNPGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 245 ELLWAAAWLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVC 324
Cdd:PLN02171 241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMC 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 325 SCVGKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNPR 404
Cdd:PLN02171 321 SCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGR-ALRCAAGNAAPSQLLAFAKSQVDYILGDNPR 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 405 GTSYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAA 484
Cdd:PLN02171 400 ATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPA 479

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 485 TYNNAPLLGVLARLAASCGGLKEEEYE-------QETATPVVNRTSSSSSLPATATAIGIEQNVTGTWARRRRTYYRYAV 557
Cdd:PLN02171 480 TYNNAPLLGVLARLAGGHGGYNQLLVVvpapsevAINRTPAPQRRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYST 559

                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 558 TVTNRSRgKTVRELHLGVSGLRGRLWGLEEARYGYVPPRWLPALRPGRSLR-VFQHSVEEIDLS 620
Cdd:PLN02171 560 TVTNRSA-KTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEfVYVHSASPADVW 622
PLN02340 PLN02340
endoglucanase
 9-607 0e+00

endoglucanase


Pssm-ID: 215194 [Multi-domain]  Cd Length: 614  Bit Score: 709.33  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   9 GAATLFGLLALASMVklgfvAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDN 88
Cdd:PLN02340  10 GAALLLLVLAAAASA-----AAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAGDH 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  89 VKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQ 168
Cdd:PLN02340  85 VKFGLPMAFAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTPRT 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 169 AFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSfSGYGDELLW 248
Cdd:PLN02340 165 AYKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKKFYTS-SGYSDELLW 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 249 AAAWLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVCSCVG 328
Cdd:PLN02340 244 AAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYFACACLQ 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 329 K-GAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISgRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTS 407
Cdd:PLN02340 324 KnGGYNIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAA-NAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMS 402

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 408 YMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYN 487
Cdd:PLN02340 403 YMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTLSG 482

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 488 NAPLLGVLARLAASCGglKEEEYEQETATPvvnrtsSSSSLPATATAIGIEQNVTGTWARRRRTYYRYAVTVTNRSrGKT 567
Cdd:PLN02340 483 NAPLVGLFAKLQSASE--TADAYGSYKPTP------NTSSPKQSGAPVEFVHSITNTWTAGGTTYYRHKVIIKNKS-QKP 553

                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 222630606 568 VRELHLGVSGLRGRLWGLE--EARYGYVPPRWLPALRPGRSL 607
Cdd:PLN02340 554 ITDLKLVIEDLSGPIWGLNptKEKNTYELPQWQKVLQPGSQL 595
PLN02420 PLN02420
endoglucanase
 12-519 0e+00

endoglucanase


Pssm-ID: 178040  Cd Length: 525  Bit Score: 696.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  12 TLFGLLALASMVKLGFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKF 91
Cdd:PLN02420  19 LLITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKF 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  92 GLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFR 171
Cdd:PLN02420  99 GLPMAFTVTMLSWSVIEYGDQLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFK 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 172 VDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELLWAAA 251
Cdd:PLN02420 179 IDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWGAT 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 252 WLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVCSCVGK-- 329
Cdd:PLN02420 259 WLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKni 338

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 330 GAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYM 409
Cdd:PLN02420 339 NGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNT-DLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYL 417

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 410 VGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNA 489
Cdd:PLN02420 418 VGYGPKYPTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRGNYVQTEACTYNTA 497

                        490       500       510
                 ....*....|....*....|....*....|
gi 222630606 490 PLLGVLARLAAscgglKEEEYEQETATPVV 519
Cdd:PLN02420 498 PLVGVFARLIE-----LEEQKLEEEDVSLV 522
PLN00119 PLN00119
endoglucanase
 34-499 0e+00

endoglucanase


Pssm-ID: 177732  Cd Length: 489  Bit Score: 633.86  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  34 DYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQM 113
Cdd:PLN00119  31 NYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMGSQL 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 114 AAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAAS 193
Cdd:PLN00119 111 KAHHELGNALAALKWATDYLIKAHPQPNVLYGQVGDGNSDHACWMRPEDMTTPRTSYRIDAQHPGSDLAGETAAAMAAAS 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 194 IVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSfSGYGDELLWAAAWLFEATEDRSYLEYLagnGEAl 273
Cdd:PLN00119 191 IAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPNAGGFYAS-SGYEDELLWAAAWLHRATNDQTYLDYL---TQA- 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 274 GGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQrYRQNAEFFVCSCVGKGAVNVARTPGGMMYHQRWNNLQFV 353
Cdd:PLN00119 266 SNTGGPRTVFAWDDKFVGAQVLVAKLALEGKVESNGKIVE-YKSMAEQFICNCAQKGSNNVKKTPGGLLWFLPWNNLQYT 344

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 354 TSASFLLTVYADFAAiSGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVSIKRD 433
Cdd:PLN00119 345 TAASFVLSAYSKYLE-AAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMSYMVGYGTNYPKKPHHRGASIVSIKKD 423

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 222630606 434 PSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLA 499
Cdd:PLN00119 424 KTPVTCSGGFDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNFQQAEPATVTVAPFVGVLAAVA 489
PLN02266 PLN02266
endoglucanase
 33-505 0e+00

endoglucanase


Pssm-ID: 215150  Cd Length: 510  Bit Score: 559.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  33 HDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQ 112
Cdd:PLN02266  45 HNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGL 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 113 MAaaGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAA 192
Cdd:PLN02266 125 MK--SELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAAA 202

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 193 SIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASIT-VARNYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLAGNGE 271
Cdd:PLN02266 203 SLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKpDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQ 282

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 272 ALGGTGWSiNQFGWDVKYPGVQVLAAK-FLLQgragdHAAALQRYRQNAEFFVCSCVGKGAVNVAR-TPGGMMYHQRWNN 349
Cdd:PLN02266 283 ILGADEFD-NTFGWDNKHVGARILLSKaFLVQ-----KVQSLHEYKGHADNFICSVIPGAPFSSTQyTPGGLLFKMSDSN 356

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 350 LQFVTSASFLLTVYADFAAiSGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVS 429
Cdd:PLN02266 357 MQYVTSTSFLLLTYAKYLT-SAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPS 435

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 222630606 430 IKRDPSFVSCQEGYSSWYGREAgNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLAASCGGL 505
Cdd:PLN02266 436 VAAHPAKIQCSQGFSIMNSQSP-NPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSYGQL 510
PLN02613 PLN02613
endoglucanase
 26-519 0e+00

endoglucanase


Pssm-ID: 215331  Cd Length: 498  Bit Score: 548.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  26 GFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWS 105
Cdd:PLN02613  18 SLVALESPDYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGKPENVNLTGGYYDAGDNVKFGWPMAFTVTLLSWA 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 106 ILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAET 185
Cdd:PLN02613  98 AIEYQNEISSVNQLGYLRSAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITSSSPGSEAAGEA 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 186 AAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITvarnYYGSFSGYGDELLWAAAWLFEATEDRSYLEY 265
Cdd:PLN02613 178 AAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQASCP----FYCSYSGYQDELLWAAAWLYKATGEKKYLNY 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 266 LAGNgealggTGWS--INQFGWDVKYPGVQVLAAKFLLQGRagdhaAALQRYRQNAEFFVCSCV-GKGAVNVARTPGGMM 342
Cdd:PLN02613 254 VISN------KGWSqaVNEFSWDNKFAGAQALLASEFYGGA-----NDLAKFKTDVESFVCALMpGSSSVQIKTTPGGLL 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 343 YHQRWNNLQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHH 422
Cdd:PLN02613 323 FTRDSSNLQYVTTATTVLFIYSKTLTKAGVGGIQCGSAQFSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTKYPTQIHH 402

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 423 RGASIVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVlarLAASC 502
Cdd:PLN02613 403 RGSSIPSIQVLPEKVDCNGGFSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHAEPTTYINAAFVGS---VAALI 479

                        490
                 ....*....|....*..
gi 222630606 503 GGLKEEEYEQETATPVV 519
Cdd:PLN02613 480 KQVSRLEEPTDSSSSVD 496
PLN02308 PLN02308
endoglucanase
 9-500 1.01e-178

endoglucanase


Pssm-ID: 177943  Cd Length: 492  Bit Score: 527.94  E-value: 1.01e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   9 GAATLFGLLALASMVKLGFVAGGGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDN 88
Cdd:PLN02308   3 VKSLAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAGDN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  89 VKFGLPMAFTVTMMSWSILEYGKQMAAagELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQ 168
Cdd:PLN02308  83 VKFGFPMAFTTTLMSWSIIDFGRTMGP--ELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 169 AFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVAR-NYYGSFSGYGDELL 247
Cdd:PLN02308 161 VYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVcPFYCDFNGYQDELL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 248 WAAAWLFEATEDRSYLEYLAGNgEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRagdhAAALQRYRQNAEFFVCSCV 327
Cdd:PLN02308 241 WGAAWLHKASRRREYREYIVKN-EVILGAGDTINEFGWDNKHAGINVLISKEVLMGK----AEYFQSFKQNADGFICSLL 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 328 -GKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGrGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGT 406
Cdd:PLN02308 316 pGISHPQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHAN-KVVPCGESTASPALLRQVAKRQVDYILGDNPLRM 394

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 407 SYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGySSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATY 486
Cdd:PLN02308 395 SYMVGYGSRFPQRIHHRGSSLPSVAAHPARIGCKEG-SRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTY 473

                        490
                 ....*....|....
gi 222630606 487 NNAPLLGVLARLAA 500
Cdd:PLN02308 474 INAPLVGLLAYFSA 487
PLN02345 PLN02345
endoglucanase
 38-501 1.74e-178

endoglucanase


Pssm-ID: 177979  Cd Length: 469  Bit Score: 526.24  E-value: 1.74e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  38 ALRKSILYFQAQRSGVLPPNQrVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAG 117
Cdd:PLN02345   1 ALKIALQFFDIQKSGKLENNP-IPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAAN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 118 ELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFR 197
Cdd:PLN02345  80 QLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFK 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 198 GTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSfSGYGDELLWAAAWLFEATEDRSYLEYLAG-NGEALGGT 276
Cdd:PLN02345 160 SSDSTYSDTLLKHAKQLFNFADKYRGSYSESIPEVQDYYNS-TGYGDELLWAASWLYHATGDKTYLAYVTGkNGKEFADW 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 277 G---WsinqFGWDVKYPGVQVLAAK---FLLQGRAGDHAAALQRYRQNAEFFVCSCVGKG-AVNVARTPGGMMYHQRWNN 349
Cdd:PLN02345 239 GsptW----FSWDDKLAGTQVLLSRltfFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSpTATTSRTDGGLIWVSEWNA 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 350 LQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASI-V 428
Cdd:PLN02345 315 LQHAVNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIpA 394

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 222630606 429 SIKRDpsfvsCQEGYsSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLAAS 501
Cdd:PLN02345 395 DAKTG-----CKDGF-KWLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTT 461
PLN03009 PLN03009
cellulase
 33-503 3.75e-170

cellulase


Pssm-ID: 166650  Cd Length: 495  Bit Score: 505.67  E-value: 3.75e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  33 HDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQ 112
Cdd:PLN03009  27 HDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVIEFGDL 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 113 MAAaGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAA 192
Cdd:PLN03009 107 MPS-SELRNSLVAIRWATDYLLKTVSQPNRIFVQVGDPIADHNCWERPEDMDTPRTVYAVNAPNPASDVAGETAAALAAS 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 193 SIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARN---YYGSFSGYGDELLWAAAWLFEATEDRSYLEYLAGN 269
Cdd:PLN03009 186 SMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNDDIKDGvcpFYCDFDGYQDELLWGAAWLRRASGDDSYLNYIENN 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 270 GEALGGTGwSINQFGWDVKYPGVQVLAAKFLLQGragdHAAALQRYRQNAEFFVCSCVGKGA-VNVARTPGGMMYHQRWN 348
Cdd:PLN03009 266 GETLGAND-NINEFGWDNKHAGLNVLVSKEVLEG----NMYSLQSYKASADSFMCTLIPESSsSHVEYTPGGLIYKPGGS 340

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 349 NLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIV 428
Cdd:PLN03009 341 NLQHATTISFLLLVYANYLSRSSQ-SVNCGNLTIGPDSLRQQAKRQVDYILGDNPMGLSYMVGYSERYPQRIHHRGSSLP 419

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 222630606 429 SIKRDPSFVSCQEGySSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLAASCG 503
Cdd:PLN03009 420 SIKDHPEAIACKEG-SVYFNSSNPNPNVLVGAVVGGPGEDDSYEDDRDDFRKSEPTTYINAPFVGVLAYFAANPG 493
Glyco_hydro_9 pfam00759
Glycosyl hydrolase family 9;
38-495 3.44e-165

Glycosyl hydrolase family 9;


Pssm-ID: 459928 [Multi-domain]  Cd Length: 376  Bit Score: 488.25  E-value: 3.44e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   38 ALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKAN------GVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGK 111
Cdd:pfam00759   2 ALQKSLLFFYAQRSGKLPDNNRVAWRGDSHLDDGAAAlsgddgGVDLSGGWYDAGDYVKFGVPMAFTVTMLLWAYEEFPD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  112 QMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAA 191
Cdd:pfam00759  82 AYKAAGDLDHILDELKWGLDYLLKMHPSDGVLYVQVGDGDADHKCWGPPEDMTTPRPVYKIDASNPGTDAAAETAAALAA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  192 ASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSfSGYGDELLWAAAWLFEATEDRSYLEYLAGNGE 271
Cdd:pfam00759 162 ASRVFKKSDPAYAAKLLAAAKQLYAFADTYRGYSDSIPAVGGGFYNS-SGYEDELLWAAAWLYKATGDSSYLDYAESYYS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  272 ALGGTGWSINQ--FGWDVKYPGvqvlaakfllqgragdhaaalqryrqnaeffvcscvgkgavnvartpggmmyhqrwnn 349
Cdd:pfam00759 241 ALGGTAFSSTGwgFSWDNKVAG---------------------------------------------------------- 262

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  350 lqFVTSASFLLTVYADFaaisgrgavhcpagAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVS 429
Cdd:pfam00759 263 --YAANAAFLLLVYADL--------------LGDPSKYRDFAKSQIDYLLGDNPLGMSYVVGYGENSPKNPHHRAASGSS 326

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 222630606  430 IKRDPsfvscqegysswygreAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVL 495
Cdd:pfam00759 327 RDASP----------------APNPNPLPGALVGGPNPDDSYVDDRNDYSTNEVAIDYNAPLVGAL 376
PLN02909 PLN02909
Endoglucanase
 7-500 9.53e-164

Endoglucanase


Pssm-ID: 178497  Cd Length: 486  Bit Score: 489.01  E-value: 9.53e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606   7 AHGAATLFGLLALASMVKLGFVAGGGH--DYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYD 84
Cdd:PLN02909   5 AGRANVLAALTLLGLYGIPSLVVAVGThfNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYD 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  85 AGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMT 164
Cdd:PLN02909  85 AGDNVKYGLPMAFTVTTLAWSTLAYEKELRATGELENVRAAIRWGTDYFLKAASRKNRLYVQVGDPNLDHQCWVRPENMK 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 165 TSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITvarnYYGSFSGYGD 244
Cdd:PLN02909 165 TPRTVLEIDEKTPGTEIAAETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGECP----FYCSYSGYND 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 245 ELLWAAAWLFEATEDRSYLEYLAgnGEALGGtgwSINQFGWDVKYPGVQVLAAKFLLQGRAGdhaaaLQRYRQNAEFFVC 324
Cdd:PLN02909 241 ELLWAATWLYKATKKQMYLKYIK--HEAISA---SVAEFSWDLKYAGAQVLLSKLNFEGEKG-----LQSYKQQADSFVC 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 325 SCV-GKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFAAISGRgAVHCPAGAAQPFDILKFVKSQVNYILGDNP 403
Cdd:PLN02909 311 SVLpGSPFHQVFITPGGMIHLRDGANSQYVTSTAFLFSVYSDILRRHNQ-KVMCGNQQFDSTRLMAFAKQQIDYLLGANP 389

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 404 RGTSYMVGYGASYPRQVHHRGASiVSIKRDPSFVSCQEGYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEA 483
Cdd:PLN02909 390 QGRSYMVGFGPNPPKQPHHRGAS-VPVLPANTPVNCGLSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEP 468

                        490
                 ....*....|....*..
gi 222630606 484 ATYNNAPLLGVLARLAA 500
Cdd:PLN02909 469 CTYINSLAVGVLAKLAA 485
PLN02175 PLN02175
endoglucanase
 34-500 5.54e-130

endoglucanase


Pssm-ID: 177832  Cd Length: 484  Bit Score: 401.40  E-value: 5.54e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606  34 DYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQM 113
Cdd:PLN02175  24 NYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSALEYGKRM 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 114 AAagELRNAMDAVKWGTDYFIK-AHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAA 192
Cdd:PLN02175 104 GP--ELENARVNIRWATDYLLKcARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAAA 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 193 SIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVAR-NYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLagngE 271
Cdd:PLN02175 182 SMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVcPFYCSYSGYKDELMWGASWLLRATNDPYYANFI----K 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 272 ALGGtGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDhaaaLQRYRQNAEFFVCSCVGKGAVNVAR-TPGGMMYHQRWNNL 350
Cdd:PLN02175 258 SLGG-GDQPDIFSWDNKYAGAYVLLSRRALLNKDSN----FEQYKQAAENFICKILPDSPSSSTQyTQGGLMYKLPQSNL 332

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 351 QFVTSASFLLTVYADFAAiSGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVSI 430
Cdd:PLN02175 333 QYVTSITFLLTTYAKYMK-STKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSH 411

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 431 KRDPSFVSCQEGYSSWYGREAgNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLAA 500
Cdd:PLN02175 412 ALRSNSLGCNGGFQSFYTQNP-NPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPLAYFAA 480
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
656-894 5.36e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 102.70  E-value: 5.36e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 656 WALSGMRTLKELDLSRCSKISDAGIKHIASIESLEKLhvsqTGLTDNGVMAISSLINLRLLDLGGVRFTD--KALRSLqv 733
Cdd:COG4886   62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNL----TELDLSGNEELSNLTNLESLDLSGNQLTDlpEELANL-- 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 734 lTQLEHLDIWGSEITNEGASvLIAFTSLSFLNISWTRVTCLPI----LPTLRCLNMSNCTIHSIcNGEFQVLIHLEKLII 809
Cdd:COG4886  136 -TNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQLTDLPEelgnLTNLKELDLSNNQITDL-PEPLGNLTNLEELDL 212

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 810 SAASFGNIDEVFSSIlpSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISdaIEYIANIGmNLKFLSLSNSEVTSQ 889
Cdd:COG4886  213 SGNQLTDLPEPLANL--TNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTD--LPPLANLT-NLKTLDLSNNQLTDL 287


                 ....*
gi 222630606 890 ALCVL 894
Cdd:COG4886  288 KLKEL 292
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
658-917 4.08e-22

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 100.01  E-value: 4.08e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 658 LSGMRTLKELDLSRCskisdagiKHIASIESLEKLHVSQTGLTDNGVmAISSLINLRLLDLGGVRFTDkALRSLQVLTQL 737
Cdd:COG4886   92 LGDLTNLTELDLSGN--------EELSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTD-LPEPLGNLTNL 161

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 738 EHLDIWGSEITNEGASvLIAFTSLSFLNISWTRVTCLPI----LPTLRCLNMSNCTIHSIcNGEFQVLIHLEKLIISAAS 813
Cdd:COG4886  162 KSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQITDLPEplgnLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQ 239

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 814 FGNIDEVFSsiLPSsLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCV 893
Cdd:COG4886  240 LTDLPELGN--LTN-LEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLIL 316

                        250       260
                 ....*....|....*....|....
gi 222630606 894 LAGTVPSLTTLSLAHTKIDDSALL 917
Cdd:COG4886  317 LLLLTTLLLLLLLLKGLLVTLTTL 340
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
664-937 4.70e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 93.84  E-value: 4.70e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 664 LKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLqvLTQLEHLDIW 743
Cdd:COG4886    3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLS--LLLLLLLSLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 744 GSEITNEGASVLIAFTSLSFLNISWTRVtcLPILPTLRCLNMSNCTIHSICNgEFQVLIHLEKLIISAASFGNIDEVFSS 823
Cdd:COG4886   81 LLSLLLLGLTDLGDLTNLTELDLSGNEE--LSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTDLPEPLGN 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 824 IlpSSLTYLDMSSCSSSNL-YFLGNMRNLEHLDLSYSRI--ISDAIEYIANigmnLKFLSLSNSEVTS--QALcvlaGTV 898
Cdd:COG4886  158 L--TNLKSLDLSNNQLTDLpEELGNLTNLKELDLSNNQItdLPEPLGNLTN----LEELDLSGNQLTDlpEPL----ANL 227

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 222630606 899 PSLTTLSLAHTKIDDsaLLYISMMPSLRILNLSRTCIKD 937
Cdd:COG4886  228 TNLETLDLSNNQLTD--LPELGNLTNLEELDLSNNQLTD 264
CBM49 pfam09478
Carbohydrate binding domain CBM49; This domain is found at the C terminal of cellulases and in ...
 535-608 9.02e-17

Carbohydrate binding domain CBM49; This domain is found at the C terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose.


Pssm-ID: 286553  Cd Length: 80  Bit Score: 75.82  E-value: 9.02e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 222630606  535 IGIEQNVTGTWARRRRTYYRYAVTVTNRSrGKTVRELHLGVSGLRGRLWGLE-EARYGYVPPRWLPALRPGRSLR 608
Cdd:pfam09478   1 INISQTITSSWIDNGVTYYQYSVTITNNG-SKTIKSLTISIDNLYGPIWGVEkVSGNTYSFPSWLPSLPPGASFS 74
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
633-871 3.20e-13

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 72.66  E-value: 3.20e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 633 LGAFRYLRVLKLADCK--NVNSSavwaLSGMRTLKELDLSRCsKISDAGiKHIASIESLEKLHVSQTGLTDNGVmAISSL 710
Cdd:COG4886  155 LGNLTNLKSLDLSNNQltDLPEE----LGNLTNLKELDLSNN-QITDLP-EPLGNLTNLEELDLSGNQLTDLPE-PLANL 227

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 711 INLRLLDLGGVRFTDkaLRSLQVLTQLEHLDIWGSEITNegASVLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTI 790
Cdd:COG4886  228 TNLETLDLSNNQLTD--LPELGNLTNLEELDLSNNQLTD--LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 791 HSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIA 870
Cdd:COG4886  304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383


                 .
gi 222630606 871 N 871
Cdd:COG4886  384 L 384
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 682-951 7.78e-11

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 64.68  E-value: 7.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 682 HIASIESLEKLHVSQTGLTDNGVMAISSLI---------NLRLLDLGG-VRFTDKALRSLQVLTQLEHLDIWGSEITNEG 751
Cdd:cd00116   18 LLPKLLCLQVLRLEGNTLGEEAAKALASALrpqpslkelCLSLNETGRiPRGLQSLLQGLTKGCGLQELDLSDNALGPDG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 752 ASVLIAFTSLSFLNIswtrvtclpilptlrcLNMSNCTIHS-----ICNGEFQVLIHLEKLI-----ISAASFGNIDEVF 821
Cdd:cd00116   98 CGVLESLLRSSSLQE----------------LKLNNNGLGDrglrlLAKGLKDLPPALEKLVlgrnrLEGASCEALAKAL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 822 SSIlpssltyldmsscsssnlyflgnmRNLEHLDLSYSRIISDAIEYIANIG---MNLKFLSLSNSEVTSQALCVLAGTV 898
Cdd:cd00116  162 RAN------------------------RDLKELNLANNGIGDAGIRALAEGLkanCNLEVLDLNNNGLTDEGASALAETL 217

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 899 PS---LTTLSLAHTKIDD---SALLYISMMP--SLRILNLSRTCIKDERIKYSKE---EMMELQ 951
Cdd:cd00116  218 ASlksLEVLNLGDNNLTDagaAALASALLSPniSLLTLSLSCNDITDDGAKDLAEvlaEKESLL 281
AMN1 cd09293
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ...
 630-767 4.15e-10

Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.


Pssm-ID: 187754 [Multi-domain]  Cd Length: 226  Bit Score: 60.80  E-value: 4.15e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 630 LAYLGAFRYLRVLKLADCKNVNSSAVWAL-SGMRTLKELDLSRCSKISDAGIKHIA-SIESLEKL----HVSQTGLTDNG 703
Cdd:cd09293   45 LDQLSNCNKLKKLILPGSKLIDDEGLIALaQSCPNLQVLDLRACENITDSGIVALAtNCPKLQTInlgrHRNGHLITDVS 124

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 222630606 704 VMAISSLI-NLRLLDLGGVRFTDKALRSL--QVLTQLEHLDIWG-SEITNegASVLIAFTSLSFLNIS 767
Cdd:cd09293  125 LSALGKNCtFLQTVGFAGCDVTDKGVWELasGCSKSLERLSLNNcRNLTD--QSIPAILASNYFPNLS 190
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 639-772 5.06e-10

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 61.99  E-value: 5.06e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 639 LRVLKLADCK-NVNSSAVWA--LSGMRTLKELDLSRCSkISDAGIKHIASI----ESLEKLHVSQTGLTDNGV----MAI 707
Cdd:cd00116  139 LEKLVLGRNRlEGASCEALAkaLRANRDLKELNLANNG-IGDAGIRALAEGlkanCNLEVLDLNNNGLTDEGAsalaETL 217

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 222630606 708 SSLINLRLLDLGGVRFTDKALRSL-----QVLTQLEHLDIWGSEITNEGA----SVLIAFTSLSFLNISWTRVT 772
Cdd:cd00116  218 ASLKSLEVLNLGDNNLTDAGAAALasallSPNISLLTLSLSCNDITDDGAkdlaEVLAEKESLLELDLRGNKFG 291
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 657-767 3.61e-08

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 57.11  E-value: 3.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 657 ALSGMRTLKELDLSrCSKISDAG----IKHIASIESLEKLHVSQTGLTDNGVMAISSLI----NLRLLDLGGVRFTDKAL 728
Cdd:COG5238  259 ALKNNTTVETLYLS-GNQIGAEGaialAKALQGNTTLTSLDLSVNRIGDEGAIALAEGLqgnkTLHTLNLAYNGIGAQGA 337

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 222630606 729 RSL----QVLTQLEHLDIWGSEITNEGASVLIAF----TSLSFLNIS 767
Cdd:COG5238  338 IALakalQENTTLHSLDLSDNQIGDEGAIALAKYlegnTTLRELNLG 384
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 561-810 4.35e-08

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 56.21  E-value: 4.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 561 NRSRGKTVRELHLGVSGLRGRLWGLEEARYgyvppRWL-PALRPGRSLrvfqhsvEEIDLSG--HIAVDAEWLAYLGAFR 637
Cdd:cd00116   11 KTERATELLPKLLCLQVLRLEGNTLGEEAA-----KALaSALRPQPSL-------KELCLSLneTGRIPRGLQSLLQGLT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 638 Y---LRVLKLADCK-NVNSSAVW-ALSGMRTLKELDLSRCSkISDAGIKHIA-----SIESLEKLHVSQTGLTDNGVMAI 707
Cdd:cd00116   79 KgcgLQELDLSDNAlGPDGCGVLeSLLRSSSLQELKLNNNG-LGDRGLRLLAkglkdLPPALEKLVLGRNRLEGASCEAL 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 708 SSLI----NLRLLDLGGVRFTDKALRSL----QVLTQLEHLDIWGSEITNEGASVLIAftslsflniswtrvtCLPILPT 779
Cdd:cd00116  158 AKALranrDLKELNLANNGIGDAGIRALaeglKANCNLEVLDLNNNGLTDEGASALAE---------------TLASLKS 222

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 222630606 780 LRCLNMSNCTIHS-----ICNGEFQVLIHLEKLIIS 810
Cdd:cd00116  223 LEVLNLGDNNLTDagaaaLASALLSPNISLLTLSLS 258
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 657-772 2.60e-07

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 54.03  E-value: 2.60e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 657 ALSGMRTLKELDLSRcSKISDAG----IKHIASIESLEKLHVSQTGLTDNGVMAISSLI----NLRLLDLGGVRFTDKAL 728
Cdd:COG5238  203 ALTQNTTVTTLWLKR-NPIGDEGaeilAEALKGNKSLTTLDLSNNQIGDEGVIALAEALknntTVETLYLSGNQIGAEGA 281

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 222630606 729 RS----LQVLTQLEHLDIWGSEITNEGASVLI----AFTSLSFLNISWTRVT 772
Cdd:COG5238  282 IAlakaLQGNTTLTSLDLSVNRIGDEGAIALAeglqGNKTLHTLNLAYNGIG 333
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
633-853 8.21e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 52.63  E-value: 8.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 633 LGAFRYLRVLKLADCKNvnSSAVWALSGMRTLKELDLSRCsKISDagIKHIASIESLEKLHVSQTGLTDngVMAISSLIN 712
Cdd:COG4886  201 LGNLTNLEELDLSGNQL--TDLPEPLANLTNLETLDLSNN-QLTD--LPELGNLTNLEELDLSNNQLTD--LPPLANLTN 273

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 713 LRLLDLGGVRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHS 792
Cdd:COG4886  274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 222630606 793 ICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEH 853
Cdd:COG4886  354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNTE 414
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 611-768 1.08e-06

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 52.10  E-value: 1.08e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 611 QHSVEEIDLSGHiAVDAEWLAYLGAfrylrvlkladcknvnssavwALSGMRTLKELDLSRcSKISDAG----IKHIASI 686
Cdd:COG5238  263 NTTVETLYLSGN-QIGAEGAIALAK---------------------ALQGNTTLTSLDLSV-NRIGDEGaialAEGLQGN 319

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 687 ESLEKLHVSQTGLTDNGVMAISSLI----NLRLLDLGGVRFTD---KAL-RSLQVLTQLEHLDIWGSEITNEGASVLIA- 757
Cdd:COG5238  320 KTLHTLNLAYNGIGAQGAIALAKALqentTLHSLDLSDNQIGDegaIALaKYLEGNTTLRELNLGKNNIGKQGAEALIDa 399

                        170
                 ....*....|...
gi 222630606 758 --FTSLSFLNISW 768
Cdd:COG5238  400 lqTNRLHTLILDG 412
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 682-847 3.66e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 49.01  E-value: 3.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 682 HIASIESLEKLhvsqTGLT-----DNgvmAIS------SLINLRLLDLGGVRFTdkALRSLQVLTQLEHLDIWGSEITNE 750
Cdd:cd21340   35 KITKIENLEFL----TNLThlylqNN---QIEkienleNLVNLKKLYLGGNRIS--VVEGLENLTNLEELHIENQRLPPG 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 751 gasvliafTSLSFLNISWTrvtclPILPTLRCLNMSNCTIHSIcnGEFQVLIHLEKLIISAASFGNIDEVFSSIlpSSLT 830
Cdd:cd21340  106 --------EKLTFDPRSLA-----ALSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEELLDLL--SSWP 168

                        170
                 ....*....|....*..
gi 222630606 831 YLdmsscssSNLYFLGN 847
Cdd:cd21340  169 SL-------RELDLTGN 178
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 845-937 3.80e-05

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 45.93  E-value: 3.80e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 845 LGNMRNLEHLDLSYSRIISdaIEYIANIgMNLKFLSLSNSEVTS-QALCV----LAGTVPSLTTLSLAHTKIDDsaLLYI 919
Cdd:cd21340   64 LENLVNLKKLYLGGNRISV--VEGLENL-TNLEELHIENQRLPPgEKLTFdprsLAALSNSLRVLNISGNNIDS--LEPL 138

                         90
                 ....*....|....*...
gi 222630606 920 SMMPSLRILNLSRTCIKD 937
Cdd:cd21340  139 APLRNLEQLDASNNQISD 156
AMN1 cd09293
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ...
 778-932 8.66e-05

Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.


Pssm-ID: 187754 [Multi-domain]  Cd Length: 226  Bit Score: 45.01  E-value: 8.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 778 PTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASfgNIDEVFSSILPSSLTyldmsscsssnlyflgnmrNLEHLDLS 857
Cdd:cd09293   28 SGLEWLELYMCPISDPPLDQLSNCNKLKKLILPGSK--LIDDEGLIALAQSCP-------------------NLQVLDLR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 858 YSRIISDA-IEYIANIGMNLKFLSLSNSE----VTSQALCVLAGTVPSLTTLSLAHTKIDDSAL--LYISMMPSLRILNL 930
Cdd:cd09293   87 ACENITDSgIVALATNCPKLQTINLGRHRnghlITDVSLSALGKNCTFLQTVGFAGCDVTDKGVweLASGCSKSLERLSL 166


                 ..
gi 222630606 931 SR 932
Cdd:cd09293  167 NN 168
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 828-936 1.11e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 44.39  E-value: 1.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 828 SLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRiISDAieyianigmnlkflslsnsevtsQALCVLAGTVPSLTTLSL- 906
Cdd:cd21340  121 SLRVLNISGNNIDSLEPLAPLRNLEQLDASNNQ-ISDL-----------------------EELLDLLSSWPSLRELDLt 176

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 222630606 907 -----AHTKIDDSAllyISMMPSLRILN------LSRTCIK 936
Cdd:cd21340  177 gnpvcKKPKYRDKI---ILASKSLEVLDgkeitdTERQFLK 214
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 613-740 1.34e-04

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 45.55  E-value: 1.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 613 SVEEIDLSGHIAVDAEWLAY---LGAFRYLRVLKLADCKNVNSSAVW---ALSGMRTLKELDLSRcSKISDAG----IKH 682
Cdd:COG5238  293 TLTSLDLSVNRIGDEGAIALaegLQGNKTLHTLNLAYNGIGAQGAIAlakALQENTTLHSLDLSD-NQIGDEGaialAKY 371

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 222630606 683 IASIESLEKLHVSQTGLTDNGVMAISSLIN---LRLLDLGGVRFTDKALRSLQVltQLEHL 740
Cdd:COG5238  372 LEGNTTLRELNLGKNNIGKQGAEALIDALQtnrLHTLILDGNLIGAEAQQRLEQ--LLERI 430
LRR_CC smart00367
Leucine-rich repeat - CC (cysteine-containing) subfamily;
664-685 5.66e-04

Leucine-rich repeat - CC (cysteine-containing) subfamily;


Pssm-ID: 197685 [Multi-domain]  Cd Length: 26  Bit Score: 37.77  E-value: 5.66e-04
                           10        20
                   ....*....|....*....|..
gi 222630606   664 LKELDLSRCSKISDAGIKHIAS 685
Cdd:smart00367   4 LRELDLSGCTNITDEGLQALAK 25
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 845-937 2.11e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 40.54  E-value: 2.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222630606 845 LGNMRNLEHLDLSYSRiisdaIEYIANIGM--NLKFLSLSNSEVTsqalcVLAG--TVPSLTTLSLAHTKI--------D 912
Cdd:cd21340   42 LEFLTNLTHLYLQNNQ-----IEKIENLENlvNLKKLYLGGNRIS-----VVEGleNLTNLEELHIENQRLppgekltfD 111

                         90       100
                 ....*....|....*....|....*
gi 222630606 913 DSALLYISmmPSLRILNLSRTCIKD 937
Cdd:cd21340  112 PRSLAALS--NSLRVLNISGNNIDS 134
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 899-937 8.04e-03

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 35.30  E-value: 8.04e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 222630606  899 PSLTTLSLAHTKIDDSALLyiSMMPSLRILNLSR-TCIKD 937
Cdd:pfam12799   1 PNLEVLDLSNNQITDIPPL--AKLPNLETLDLSGnNKITD 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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