|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
1.50e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 475.80 E-value: 1.50e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWVVQSLMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTASESVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 81 RTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFN 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 161 VYSLYGSLDLSLLMDMSLFNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMIS 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 241 MGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 321 TYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 219524099 401 YSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGELCIMW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
1.23e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 338.49 E-value: 1.23e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWVVQSLMYFMTFVFIFGCVMNDGLGN-LSYFFGCDVLSYGLILLSFWICALMVTASESV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSfISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 80 YRTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 160 NVYSLYGSLDLSLLMDM---SLFNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLnfsDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 237 MMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFA 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 317 LANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 219524099 397 YLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGELCI 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
44-446 |
8.32e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 332.57 E-value: 8.32e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 44 GLGNLSYFFGCDVLSYGLILLSFWICALMVTASESVYRTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPT 123
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 124 LMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNILY---YFGLILAFLVKIPMFLV 200
Cdd:MTH00150 92 LLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMglwGLLVFLAFLVKLPMYPF 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 201 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVS 280
Cdd:MTH00150 172 HLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 281 HMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPS 360
Cdd:MTH00150 252 HMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 361 LNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGE 440
Cdd:MTH00150 332 LNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSD 411
|
....*.
gi 219524099 441 LCIMWL 446
Cdd:MTH00150 412 LLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-446 |
4.12e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.78 E-value: 4.12e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWVVQS---LMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 78 SVYRTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 158 LFNVYSLYGSLDL---SLLMDMSLFNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMlmsSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 235 YSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 315 FALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 219524099 395 TLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGELCIMWL 446
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
47-441 |
2.19e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 312.52 E-value: 2.19e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 47 NLSYFFGCDVLSYGLILLSFWICALMVTASESVYRTKFYNQ--LFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTL 124
Cdd:MTH00124 51 NLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 125 MLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLL------MDMSLFNILYYFGLILAFLVKIPMF 198
Cdd:MTH00124 131 ILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLqlthptLTNSWTNLLLWLACLMAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 199 LVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSS 278
Cdd:MTH00124 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 279 VSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAP 358
Cdd:MTH00124 291 VSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALP 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 359 PSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLK 438
Cdd:MTH00124 371 PTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
...
gi 219524099 439 GEL 441
Cdd:MTH00124 451 PEL 453
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
23-442 |
6.65e-98 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 301.12 E-value: 6.65e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 23 VVQSLMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTASESV--YRTKFYNQLFQIYILLLMLML 100
Cdd:MTH00044 28 ISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsNNSPNNQRTFISLIIIILTAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 101 YCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLL------- 173
Cdd:MTH00044 108 IITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSelnwlts 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 174 MDMSLFNILYYFgLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKY-NYVWVSI 252
Cdd:MTH00044 188 LSSNSSSIWWIF-CILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVF 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 253 SLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLV 332
Cdd:MTH00044 267 CCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 333 SSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLYSYSQHGMMYSGIY 412
Cdd:MTH00044 347 TRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWIS 426
|
410 420 430
....*....|....*....|....*....|
gi 219524099 413 SCSSGYTREYLLLLLHWIPLNILVLKGELC 442
Cdd:MTH00044 427 NVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
1.08e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 300.68 E-value: 1.08e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWV-----VQSLMYFMTFVFIFGCVMNDGLGNLSYFfGCDVLSYGLILLSFWICALMVTA 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLIIAFLSLMWFNLPSETMNFTNKYF-GIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 76 SESVYRTKFYN--QLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLP 153
Cdd:MTH00068 80 SQNHLKNEPINrqRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 154 LLIGLFNVYSLYGSLDLSLLMDMSL------FNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPmqlmtyTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 228 GYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 308 GLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMML 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 219524099 388 SFFSAVYTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGEL 441
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPEL 453
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-442 |
7.18e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 295.70 E-value: 7.18e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWVVQSLMYFMTFVFI--FGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTASES 78
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLlwFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 79 VYRTK--FYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLI 156
Cdd:MTH00206 82 HMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 157 GLFNVYSLYGSLDLSLLMDMSL---FNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR 233
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSKLttwNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 234 VYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSG 313
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 314 LFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAV 393
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 219524099 394 YTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGELC 442
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.47e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 287.17 E-value: 1.47e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWWV-----VQSLMYFMTFVFIFGCVMNDGLgNLSYFFGCDVLSYGLILLSFWICALMVTA 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSL-NFSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 76 S------ESVYRTKFYNQLfqiyILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLF 149
Cdd:MTH00110 80 SqhhlskEPLTRKKLYITM----LILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 150 ASLPLLIGLFNVYSLYGSLDLSLL------MDMSLFNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVL 223
Cdd:MTH00110 156 GSLPLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAIL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 224 LKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTL 303
Cdd:MTH00110 236 LKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 304 MIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLM 383
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 219524099 384 LMMLSFFSAVYTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVL 437
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
7.63e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 277.99 E-value: 7.63e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWW-----VVQSLMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 76 SESVYRTKFYNQ--LFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 154 LLIGLFNVYSLYGSLDL------SLLMDMSLFNILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMltlqysQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 228 GYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 308 GLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMML 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 219524099 388 SFFSAVYTLYLYSYSQHGMMYSGIYSCSSGYTREYLLLLLHWIPLNILVLKGELciMW 445
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPEL--IW 456
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-378 |
5.22e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 182.13 E-value: 5.22e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLL------MDMSLF 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 180 NILYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVL 259
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 260 VSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALA-NITYERLGSRSMLVSSGLMS 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 219524099 339 FMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSW 378
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASW 280
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-399 |
2.83e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 177.58 E-value: 2.83e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 47 NLSYFFGCDVLSYGLILLSFWICALMVTASESV--YRTKFYNQLFQIYILLLMLmlycTFSSMSMFSFYLFFESSLIPTL 124
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEikKRPKLYYALLLLLEAGMIG----VFLALDLFLFYVFWELMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 125 MLILGWGYqPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYG--SLDLSLLMDMSL---FNILYYFGLILAFLVKIPMFL 199
Cdd:COG1008 149 FLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPLpltAQLLLFLAFFIAFAVKVPMFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 200 VHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSI-SLVGGVLVSLICLYQTDLKALIAYSS 278
Cdd:COG1008 228 FHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAAlGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 279 VSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAP 358
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 219524099 359 PSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
2.14e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 172.56 E-value: 2.14e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 104 FSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNIL- 182
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIq 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 183 --YYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-YSMMISMGLKYNYVWVSISLVGGVL 259
Cdd:MTH00204 209 kwLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 260 VSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSF 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 340 MPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
1.31e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 159.45 E-value: 1.31e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 104 FSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNILY 183
Cdd:MTH00217 126 FTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 184 YF---GLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWV-SISLVGGVL 259
Cdd:MTH00217 206 YFiflGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIY 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 260 VSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSF 339
Cdd:MTH00217 286 GSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVIT 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 340 MPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:MTH00217 366 MPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
47-399 |
2.58e-43 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 158.83 E-value: 2.58e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 47 NLSYFFGCDVLSYGLILLSFWICALMVTASESV--YRTKFYNQLFqiyiLLLMLMLYCTFSSMSMFSFYLFFESSLIPTL 124
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEikKRVKFYMAAL----LWLEGGVIGVFAALDLLLFYVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 125 MLILGWGYqPERLQAGVYLLFYTLFASLPLLIGLFNVYSLY----GSLDLSLLMDMSL---FNILYYFGLILAFLVKIPM 197
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatGTFDIADLLNLPLppgVQYWLFLAFFIAFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 198 FLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR-VYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAY 276
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 277 SSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMA 356
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 219524099 357 APPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
47-399 |
8.90e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 157.02 E-value: 8.90e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 47 NLSYFFGCDVLSYGLILLSFWICALMVTAS--ESVYRTKFYNQLFqiyiLLLMLMLYCTFSSMSMFSFYLFFESSLIPTL 124
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASweSIQKRVKEFYALL----LLLEAGVIGVFLALDLFLFYVFWEAMLIPMY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 125 MLILGWGyQPERLQAGVYLLFYTLFASLPLLIGLFNVYSL-YGSLDLSLLMDMSL---FNILYYFGLILAFLVKIPMFLV 200
Cdd:TIGR01972 144 LLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLgGGTFDLLELLNLPLpfgVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 201 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-YSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSV 279
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 280 SHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPP 359
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 219524099 360 SLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-398 |
8.85e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 149.30 E-value: 8.85e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 52 FGCDVLSYGLILLSFWI--CALMVTASESVYRTKFynqlFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 130 WGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLF-----NILYYFGLILAFLVKIPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVvseqtQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 205 PKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLK-YNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMG 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 284 IVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....*
gi 219524099 364 MGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYL 398
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-418 |
7.98e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 144.66 E-value: 7.98e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 26 SLMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTASESVYRTKFYNQLfqiyillLMLMLYCTFS 105
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNL-------LILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLygsldLSLLMDMSLFNILYYF 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFF-----FSLCYFDFFLSWEMFF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 186 GLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRvysMMISMGLKYNYVWVSISLVGGVLVSLICL 265
Cdd:MTH00094 156 ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 266 YQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTL 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219524099 346 WWFLLSSSNMAAPPSLNLMGEIGLFNSLVSWSWLTMLMLMMLSFFSAVYTLYLYSYSQHGMMYSGIYSCSSGY 418
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-370 |
1.29e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 126.30 E-value: 1.29e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 48 LSYFFGCDVLSYGLILLSFWICALMVTASESVYRTKfynQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 128 LGWGYQpERLQAGVYLLFYTLFASLPLLIGLFNVySLYG---SLDLSLLMDMSL---FNILYYFGLILAFLVKIPMFLVH 201
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLAL-ALSGdtfTFDLAELGAKSYplaLELLLYAGFLIAFGVKLPIFPLH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 202 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMG-LKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVS 280
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAhVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 281 HMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPsMTLWWFLLSS-SNMAAPP 359
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPG 364
|
330
....*....|.
gi 219524099 360 SLNLMGEIGLF 370
Cdd:PRK12561 365 MSGFVSELTVF 375
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-403 |
1.43e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 113.70 E-value: 1.43e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 9 LFMIPLCLLVDFWWVVQ-------SLMYFMTFVFIFGCVMNDG-----LGNLSYFFG----CDVLSYGLILLSFWICALM 72
Cdd:COG0651 13 LLAAALLLLLGRRRRLQralsllaSLALLALALALLLQVLAGGplvyaLGGWPAPFGivlvADRLSALFLLLTALVALAV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 73 VTASESVYRTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWGYqPERLQAGVYLLFYTLFASL 152
Cdd:COG0651 93 LLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 153 PLLIGLFNVYSLYGSLDLSLL------MDMSLFNILYYFgLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKL 226
Cdd:COG0651 172 LFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 227 GGYGLLRVYSMMI--SMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLM 304
Cdd:COG0651 251 GVYAILRVLTLLFgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHL 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 305 IAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLV-SWSWLTMLM 383
Cdd:COG0651 331 LNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAV 410
|
410 420
....*....|....*....|
gi 219524099 384 LMMLSFFSAVYTLYLYSYSQ 403
Cdd:COG0651 411 LLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-374 |
1.40e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 111.96 E-value: 1.40e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 52 FGCDVLSYGLILLSFWICALMVTASESVYRTkfyNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRN---SRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 132 YQpERLQAGVYLLFYTLFASLPLLIGLFNVySLYGS----LDLSLLMDMSL---FNILYYFGLILAFLVKIPMFLVHLWL 204
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGM-GLYGSneptLNFETLANQSYpvaLEILFYIGFLIAYAVKLPIIPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 205 PKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSIslVGGVLV---SLICLYQTDLKALIAYSSVSH 281
Cdd:CHL00011 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVI--VGAIQIiyaASTSLGQRNLKKRIAYSSVSH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 282 MGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMtlwWFLLSSSNMAappSL 361
Cdd:CHL00011 313 MGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKI---FTMFSSFSMA---SL 386
|
330
....*....|...
gi 219524099 362 NLMGEIGLFNSLV 374
Cdd:CHL00011 387 ALPGMSGFVAELI 399
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
9.29e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 109.80 E-value: 9.29e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 48 LSYFFGCDVLSYGLILLSFWICALMVTASESVyrtKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLMLI 127
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 128 LGWGYQpERLQAGVYLLFYTLFASLPLLIGLFNVYsLYG---SLDLSLLM--DMSL-FNILYYFGLILAFLVKIPMFLVH 201
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAALAMA-FYGdtpTFDMTALAakDFGLgFQLLCYAGLLIAYGVKLPIVPLH 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 202 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-YSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVS 280
Cdd:PRK02546 234 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSIS 313
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219524099 281 HMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAP 358
Cdd:PRK02546 314 HMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-337 |
1.77e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 105.55 E-value: 1.77e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 48 LSYFFGCDVLSYGLILL-SFWICALMVTASESVYRTKFYNQLfqiyILLLMLMLYCTFSSMSMFSFYLFFESSLIPTLML 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLnSLLTLIAIYSSDESIQRPRFYYSL----LLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 127 ILGWGYQpERLQAGVYLLFYTLFASLPLLIGLFNVYSLYG--SLDLSLLMDMSL---FNILYYFGLILAFLVKIPMFLVH 201
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRSHTLplsTQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 202 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLIC-LYQTDLKALIAYSSVS 280
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 219524099 281 HMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLM 337
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLL 362
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-401 |
3.48e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 92.63 E-value: 3.48e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 110 FSFYLFFESSLIPTLMLIlGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFN--ILYYFGL 187
Cdd:PRK08375 129 FNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENptVVTAFGF 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 188 I-LAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLV----SL 262
Cdd:PRK08375 208 VlLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSmlvgSL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 263 ICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPS 342
Cdd:PRK08375 288 AALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 343 MTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVS-WSWLTMLMLMMLSFFSAVYTLYLYSY 401
Cdd:PRK08375 368 TAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
42-370 |
3.04e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 86.69 E-value: 3.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 42 NDGLGnLSYFFGCDVLSYGLILL-SFWICALMVTASESVYRTKFYNQLfqiyILLLMLMLYCTFSSMSMFSFYLFFESSL 120
Cdd:PRK07363 66 NEPLG-LSYSLGVDGLSLPLLVLnSLLTWIAIYSIGENTERPRLYYSL----ILLINGGIAGALLAQNLLLFFLFYELEL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 121 IPTLMLILGWGYQpERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGS----LDLSLLMDMSL-FNILYYFGLILAFLVKI 195
Cdd:PRK07363 141 IPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdYDAISTQNLSLnTQLILLTGLLLGFGIKI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 196 PMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMM-------ISMGLKynyVWVSISLVGGvlvSLICLYQT 268
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpqtwslVAPGLA---IIGTISVIYG---ALSAIAQK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 269 DLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWF 348
Cdd:PRK07363 294 DIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSA 373
|
330 340
....*....|....*....|..
gi 219524099 349 LLSSSNMAAPPSLNLMGEIGLF 370
Cdd:PRK07363 374 LLVLAGMASAGIPGLVGFVAEF 395
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
106-373 |
2.09e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.54 E-value: 2.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNILYYF 185
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 186 GLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICL 265
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 266 YQTDLKALIAYSSVSHMGIVL-----------GGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSS 334
Cdd:PRK08667 290 KEHDLKGLLAYSSIENIGIILmgiglyvifgvYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMG 369
|
250 260 270
....*....|....*....|....*....|....*....
gi 219524099 335 GLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSL 373
Cdd:PRK08667 370 GLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-375 |
7.31e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 73.47 E-value: 7.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 110 FSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSL---DLSL--------LMDMSL 178
Cdd:PRK12667 136 FNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmaDLSAkirglsfpLTGGLA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 179 FNILYYFGLILA-----FLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSIS 253
Cdd:PRK12667 216 GNPPLALGVALAlalwaFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 254 -------LVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLG 326
Cdd:PRK12667 296 piliilgAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAG 375
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 219524099 327 SRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLVS 375
Cdd:PRK12667 376 TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
112-375 |
6.06e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 69.95 E-value: 6.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 112 FYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNILYYFGLILAF 191
Cdd:MTH00062 96 FWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMF 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 192 LVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMglkYNYVWVSISLVGGVLVSLICLYQTDLK 271
Cdd:MTH00062 176 ITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG---SFLGYLFLCCLFSVFFLITACSELDGK 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 272 ALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLWWFLLS 351
Cdd:MTH00062 253 RWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSF 332
|
250 260
....*....|....*....|....
gi 219524099 352 SSNMAAPPSLNLMGEIGLFNSLVS 375
Cdd:MTH00062 333 LSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-362 |
1.11e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.74 E-value: 1.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 109 MFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLL-----MDMSLFNILY 183
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavkmsENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 184 YFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMmisMGLKYNYV---WVSI-----SLV 255
Cdd:PRK08376 223 LALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSI---YGPAINLAtvgWVIIilgclTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 256 GGVLVSLIclyQTDLKALIAYSSVSHMGIVLGGL-MTLTTWGFGSSYTL-----------MIAHGLCSSGLFALANITYE 323
Cdd:PRK08376 300 VGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgVGLAALGDPAMASYgeialaggiyhIVNHALYKALLFLTAGAVIY 376
|
250 260 270
....*....|....*....|....*....|....*....
gi 219524099 324 RLGSRSMLVSSGLMSFMPsMTLWWFLLSSSNMAAPPSLN 362
Cdd:PRK08376 377 ETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-341 |
2.43e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 2.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 104 FSSMSMFSFYLFFESSLIPTLMLILgWGYQPERLQAGVYLLFYTLFASLpLLIGLFNVYSLYGSLDLS-----LLMDMSL 178
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFAdisqgLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 179 FNILYYFGLILAF-LVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGL-----------KYN 246
Cdd:PRK08668 193 GFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFN 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 247 YVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLF-ALANITYeRL 325
Cdd:PRK08668 273 YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFlIFAAVIY-RT 351
|
250
....*....|....*.
gi 219524099 326 GSRSMLVSSGLMSFMP 341
Cdd:PRK08668 352 GTTKISEMGGLIEKMP 367
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-362 |
4.91e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 64.78 E-value: 4.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 113 YLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMS-------LFNILYYF 185
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQAdhiknhgLFIPMIFM 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 186 GLILAFlVKIPMFLVHLWLPKAhVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICL 265
Cdd:PRK12646 216 FLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITAL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 266 YQTDLKALIAYSSVSHMGIVL------GGLMTLTTWGFGSSYTL--------MIAHGLCSSGLFALANITYERLGSRSML 331
Cdd:PRK12646 294 KQWDLKGILAYSTISQLGMIMamvgigGGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAGTRDIR 373
|
250 260 270
....*....|....*....|....*....|.
gi 219524099 332 VSSGLMSFMPSMTLwWFLLSSSNMAAPPSLN 362
Cdd:PRK12646 374 ILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-324 |
6.83e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 63.82 E-value: 6.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 103 TFSSMSMFSFYLFFESSLIPTLMLIlGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNil 182
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEA-- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 183 yyFGLI-LAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVysmmismGLKYNYVWVSISLVGG---V 258
Cdd:PRK07234 187 --FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC-------ALDVPGLDLIVRIFGVgtaL 257
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 219524099 259 LVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTlttwgfGSSYTLmiAHGLCSSGLFALANITYER 324
Cdd:PRK07234 258 LGVLFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSR 315
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-87 |
2.99e-10 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 57.15 E-value: 2.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 1 MLKFMFMLLFMIPLCLLVDFWW-----VVQSLMYFMTFVFIFGCVMNDGLGNLSYFFGCDVLSYGLILLSFWICALMVTA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90
....*....|..
gi 219524099 76 SESVYRTKFYNQ 87
Cdd:pfam01059 81 SQKHLKSEPNNR 92
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-395 |
5.44e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 61.29 E-value: 5.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLpLLIGLFNVYSLYGSLDLS----LLMDMSLFNI 181
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATF-YLIGIGFLYAITGTLNMGdmflIIQDLPTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 182 LY--YFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVY-----SMMISMGLKYNYVWVSISL 254
Cdd:PRK12662 208 IQigVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 255 VGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSS 334
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 219524099 335 GLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLFNSLV-SWSWLTMLMLMMLSFFSAVYT 395
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-341 |
2.88e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 59.16 E-value: 2.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFESSLIPTLMLIlgwGYQPER-------LQAgvylLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSL 178
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSLSELLASGD 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 179 F---NILYYFGLILAFL---VKIPMFLVHLWLPKAhVEAPV-------SGSMILAGvllklggygllrVYSMM-ISMGLK 244
Cdd:PRK12647 187 VireHPLYLAILLLVLGgafTKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAG------------IYLLArLNPVLG 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 245 YNYVW-VSISLVGG---VLVSLICLYQTDLKALIAYSSVShmgiVLGGLMTLTtwGFGSSYTLM------IAHGLCSSGL 314
Cdd:PRK12647 254 GTPLWqTILPLFGGltmLTGALLAVRQTDLKLILAYSTVS----ALGTLVMLL--GLGSELAIKaavlflVAHSLYKGAL 327
|
250 260
....*....|....*....|....*..
gi 219524099 315 FALANITYERLGSRSMLVSSGLMSFMP 341
Cdd:PRK12647 328 FMVAGIIDHETGTRDITKLGGLRRAMP 354
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
175-366 |
4.33e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 58.40 E-value: 4.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 175 DMSLFNILYYFGLIlAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVY-------------SMMISM 241
Cdd:PRK06458 209 DPTLMKLAFVFLLI-GFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYilidaaigsdfpgRLLLIF 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 242 GLkynyvwVSIslvggVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANIT 321
Cdd:PRK06458 288 GL------LSV-----LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNV 356
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 219524099 322 YERLGSRSMLVSSGLMSFMPsMTLWWFLLSSSNMA-APPSLNLMGE 366
Cdd:PRK06458 357 LQKYGTRDINVIRGLLKVSP-LTGWGLMLGALAIAgMPPFGVFISE 401
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-374 |
9.20e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 54.66 E-value: 9.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 188 ILAFLV------KIPMFLVHLWLPKAHVEA-PVS-----GSMILAGVLLKLggygllrVYSMMISMGLKYNYVWVSISLV 255
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLL-------RFSPVFHDVAVWNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 256 GGVLVSLICLYQTDLKALIAYSSVSHMGIVlgglmtLTTWGFGSSYTL------MIAHGLCSSGLFALANITYERLGSRS 329
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWI------VATIGVGTPFALtaavvhTLAHALFKSSLFMLIGVVDHQAGTRD 355
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 219524099 330 MLVSSGLMSFMPsMTLWWFLLSSSNMAA-PPSLNLMGEIGLFNSLV 374
Cdd:PRK12650 356 IRRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-370 |
1.80e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.43 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 102 CTFSSMSMFSFYLFFESSLIPTLMLiLGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSL---DLSLLMD--- 175
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLnmaDLAVRLDelp 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 176 ----MSLFNILyyfglILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGlKYNYVWVS 251
Cdd:PRK12665 205 sgtrTALFAVL-----LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG-GLDTLLMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 252 ISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSML 331
Cdd:PRK12665 279 VALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLR 358
|
250 260 270
....*....|....*....|....*....|....*....
gi 219524099 332 VSSGLMSFMPSMTLWWFLLSSSNMAAPPSLNLMGEIGLF 370
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
46-361 |
6.53e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 51.36 E-value: 6.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 46 GNLSYFFGCDVL-SYGLILLSF-WICALMVTASESVYRTKFYNQLFQIYILLLMLMLYCTFSSMSMFSFYLFFESSLIPT 123
Cdd:PRK06589 73 GNYSIGLHLEPLgLIFLLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTIST 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 124 LMLIlGWGYQPERLQAGVYLLFYTLFASLPL-LIGLFNVYSLYGSLDLSLLMDMSLFNILYYFGLILAFLVKIPMFLVHL 202
Cdd:PRK06589 153 AFLI-GHTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVysMMISMGLKY-------NYVWVSISLVGGVLVSLICLYQTDLKALIA 275
Cdd:PRK06589 232 WLPAAMVAHYPVSALLHAVIVVKTGLFCIYKI--LLYIFGLSYlqrifaeFNWLIFIPIVSIFYSSLKALKTDNIKKILA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 276 YSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPsMTLWWFLLSSSNM 355
Cdd:PRK06589 310 YSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP-LISFIISISSLSL 388
|
....*.
gi 219524099 356 AAPPSL 361
Cdd:PRK06589 389 IGIPIF 394
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
109-362 |
1.18e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.04 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 109 MFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFNILYYFGLI 188
Cdd:PRK06521 135 AFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFWASLVFL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 189 LAFL---VKIPMFLVHLWLPKAHVEAP--VSGSMilagvllklggygllrvYSMMISMGLkYNYVWVSISLVG------- 256
Cdd:PRK06521 215 LALFgfgAKAGLVPLHVWLPRAHPAAPshVSALM-----------------SGVMLKVAI-YGILRVVFDLLGapgwwwg 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 257 -------------GVLVSLIclyQTDLKALIAYSSVSHMGIVLGGL-----------MTLTTWGFGSSYTLMIAHGLCSS 312
Cdd:PRK06521 277 vlvlalgaisavlGVLYALA---EHDLKRLLAYSTIENIGIIFVGLglamvfiaygmPLLAALALTAALYHLLNHALFKS 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 219524099 313 GLFALANITYERLGSRSMLVSSGLMSFMPsMTLWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 354 LLFLGAGAVLHATGTRDMEKLGGLIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
105-316 |
2.20e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 49.73 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 105 SSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLS----LLMDMSLFN 180
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAgiaaALAAGGANS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 181 ILYYFGLIL---AFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-YSMMISMGLKYNYVWVSISLVG 256
Cdd:COG1007 200 PLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlVEAFPGLAADWQLLLAVLAVLS 279
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 257 GVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFA 316
Cdd:COG1007 280 MTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFA 339
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
112-327 |
2.58e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.75 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 112 FYLFFESSLIPTLMLILGWGYQpERLQAGVYLLFYTLFASLPLLIGLFNVYSLY------GSL------DLSLLMDMSLF 179
Cdd:PRK08676 127 FWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgtGTLnwtelaAHASLLSPSVL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 180 NILYYFGLIlAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGL--KYNYVWVSISLVGG 257
Cdd:PRK08676 206 GASFLFIFI-GFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAaeQFSNVLIGLGIFSI 284
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 258 VLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGS 327
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-317 |
5.53e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.66 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 149 FASLPLLIGLFNVYSLYGSLDLS----LLMDMSLFNILYYFGLIL---AFLVKIPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAgiakALADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 222 VLLKLGGYGLLRVYSMMI-SMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSS 300
Cdd:PRK05777 245 APKIAAFAVLLRLLVVAFgGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAV 324
|
170
....*....|....*..
gi 219524099 301 YTLMIAHGLCSSGLFAL 317
Cdd:PRK05777 325 LFYLLAYLFMTLGAFGV 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
1.93e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 46.68 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 187 LILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKYNYVW--VSISLVGGVLVSLIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 265 LYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 219524099 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
254-396 |
2.39e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 46.72 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 254 LVGGV-LVSL-----ICLYQTDLKALIAYSSVSHMgivlgGLMTLTTwGFGSSYTL------MIAHGLCSSGLFALANIT 321
Cdd:PRK12648 273 IVGGAgLITLllgayFALFQHDLKGLLAYSTISHL-----GLITLLL-GLGSPLAAvaaifhIINHATFKASLFMAAGII 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 322 YERLGSRSMLVSSGLMSFMP-SMTLwwFLLSSSNMAAPPSLN------LMGEIGLFNSLVSW-SWLTMLMLMMLSFFSAV 393
Cdd:PRK12648 347 DHETGTRDMRRLSGLRRLMPiTATL--AMVAAAAMAGVPLLNgflskeMFFAETLDTHLLGSlDWLLPVAATLAGAFSVA 424
|
...
gi 219524099 394 YTL 396
Cdd:PRK12648 425 YSL 427
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-359 |
2.70e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.51 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 106 SMSMFSFYLFFEssliptLMLILGWG----YQ-PERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDMSLFN 180
Cdd:PRK06525 132 SSTLLGLLLFFE------ITGLCSWAlisyYQsPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 181 ILYYFGLIL-AFLVKIPMFLVHLWLPKAhVEAPVSGSMIL-AGVLLKLGGYGLLRVYSMMismglkyNYVWVSISLVGGV 258
Cdd:PRK06525 206 KYLVFLGILfAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSM-------GPIPHVIGYVGAV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 259 LVSLICLY-------QTDLKALIAYSSVSHMGIVlggLMTLTTWGFGSSYTLMIA------HGLCSSGLFALANITYERL 325
Cdd:PRK06525 278 MAIVTLLYgflmylpQQDMKRLLAYSTITQLGYM---FFGLSLAILGSRLALEGSiayifnHAFAKSLFFLVAGALSYSC 354
|
250 260 270
....*....|....*....|....*....|....
gi 219524099 326 GSRSMLVSSGLMSFMPSMTLWWFLLSSSNMAAPP 359
Cdd:PRK06525 355 GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
149-317 |
1.05e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.55 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 149 FASLPLLIGLFNVYSLYGSLDLSLLM----DMSLFNILYYFGLIL---AFLVKIPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:TIGR01770 164 FSSGLLLFGISLIYGFTGSLNFEDLLlflsNGMLNISLLLLGIVLilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSI 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 222 VLLKLGGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLV-SLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSS 300
Cdd:TIGR01770 244 VPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIgNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAV 323
|
170
....*....|....*..
gi 219524099 301 YTLMIAHGLCSSGLFAL 317
Cdd:TIGR01770 324 LFYIFIYALMSLGAFGV 340
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-212 |
1.14e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.46 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 110 FSFYLFFESSLIPTLMLILGwGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSL---DLSLLM------DMSLFN 180
Cdd:PRK12666 132 FNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLnmaDLAQRIaqlpaaDRALLE 210
|
90 100 110
....*....|....*....|....*....|..
gi 219524099 181 ILYYFgLILAFLVKIPMFLVHLWLPKAHVEAP 212
Cdd:PRK12666 211 AGAAL-LLVVFLIKAAMWPLNFWLPPAYAAAS 241
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-362 |
1.84e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.05 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 113 YLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLS-LLMDMSLFNILYYFGLILAF 191
Cdd:PRK12649 137 FIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAtILQDSELIENIKGHPLFLIT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 192 LVKIPMFLV--------HLWLPKAhVEAPVSGSMIL-AGVLLKLGGYGLLRVYSmmISMGLKYNYVWVS-ISLVGGVLVS 261
Cdd:PRK12649 217 LILIFIGAAaksaqgpfYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP--IFSGTEAWFILVSgTGMITMVLAG 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 262 LICLYQTDLKALIAYSSVSHmgivLGGLMTLTTW--------GFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVS 333
Cdd:PRK12649 294 FLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKL 369
|
250 260
....*....|....*....|....*....
gi 219524099 334 SGLMSFMPsMTLWWFLLSSSNMAAPPSLN 362
Cdd:PRK12649 370 GGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
151-362 |
9.34e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.74 E-value: 9.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 151 SLPLLIGLFNVYSLYGSLDLSLL----MDMSLFNILYYFGLIlAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKL 226
Cdd:PRK08042 147 TLLLAIACWLLWQRYGTLDLRLLdmrmQQLPLGSDIWLLGVI-GFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 227 GGYGLLRVYSMMISMGLKYNYVWVSISLVGGVLVSLICLYQTDLKALIAYSSVSHMGIVLGGL-----------MTLTTW 295
Cdd:PRK08042 226 GLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLgagvtgialeqPALIAL 305
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 219524099 296 GFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMSFMPSMTLwWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 306 GLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI-AMLVGLMAMAALPPLN 371
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
2.70e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 40.14 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 108 SMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLLMDM--SLFNILYYF 185
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAapTILSSPLLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 186 GLILAFLV----KIPMFLVHLWLPKAhVEAPVSGS-------MILAGvllklggygllrVYsMMISMGLKYNYVWVSISL 254
Cdd:COG1009 212 LILLLLLLgafgKSAQFPLHFWLPDA-MEGPTPVSallhaatMVKAG------------VY-LLARLSPLFALSPVWLTV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 255 VGGV------LVSLICLYQTDLKALIAYSSVSHMgivlgGLMTLTTwGFGS---SYTLMIAHGLCSSGLFALANITYERL 325
Cdd:COG1009 278 VAIIgaitalFAALIALAQTDIKRVLAYSTVSQL-----GYMFLAL-GVGAyvaALFHLLTHAFFKALLFLGAGSVIHAT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219524099 326 GSRSMLVSSGLMSFMPsMTLWWFLLSSSNMAA-PPSLNLMGEIGLFNSLV---SWSWLTMLMLMMLSFFSAVYTLYLY 399
Cdd:COG1009 352 GTRDIRKMGGLRKKMP-ITAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-359 |
4.04e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.55 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 109 MFSFYLFFESSLIPTLMLILgWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSL-------------LMD 175
Cdd:PRK12663 130 LFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHiamrlndmgdtatLTT 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 176 MSLFnilyyfgLILAFLVKIPMFLVHlWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMI---SMGLKYNYVWVS- 251
Cdd:PRK12663 209 IALL-------FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqeRELLHPLLATMAa 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 252 ISLVGGVLVSLIclyQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSML 331
Cdd:PRK12663 281 ITMVIGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQ 357
|
250 260
....*....|....*....|....*...
gi 219524099 332 VSSGLMSFMPSMTLWWFLLSSSNMAAPP 359
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
102-289 |
4.91e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.86 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 102 CTFSSMSMFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFYTLFASLPLLIGLFNVYSLYGSLDLSLL-------M 174
Cdd:MTH00196 8 CLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInlvlnsgQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 175 DMSLFNILY-YFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLggygllrVYSMMISMGLKYNYVWVS-- 251
Cdd:MTH00196 88 SFSSVSVPIgYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNILLIGgl 160
|
170 180 190
....*....|....*....|....*....|....*...
gi 219524099 252 ISLVGGVLVSLiclYQTDLKALIAYSSVSHMGIVLGGL 289
Cdd:MTH00196 161 FSLFVGAIGAL---NQTKIKRLLAYSGIGHMGFVLWGI 195
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-329 |
5.98e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.07 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 182 LYYFGLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLggygllrVYSMMISMGLKyNYVWVSISLVGGVLVS 261
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFT-------VYILLTSLVIT-SKLLLSVAIISLVVGA 371
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219524099 262 LICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALAnITYERLGSRS 329
Cdd:MTH00198 372 FGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVI-CTLEEFGTRT 438
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-361 |
6.02e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 38.78 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 109 MFSFYLFFESSLIPTLMLILGWGYQPERLQAGVYLLFyTLFASLPLLIGLFNVYSLYGSL---DLSL-LMDMS-----LF 179
Cdd:PRK07691 130 IFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLnmaDISVkIAELSagqtgLI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 180 NILYYFgLILAFLVKIPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVYSMMISMGLKY-NYVWVSISLVGGV 258
Cdd:PRK07691 209 TVVAIL-FLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFtHYLILILALLTII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219524099 259 LVSLICLYQTDLKALIAYSSVSHMGIVLGGLMTLTTWGFGSSYTLMIAHGLCSSGLFALANITYERLGSRSMLVSSGLMS 338
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIK 367
|
250 260
....*....|....*....|...
gi 219524099 339 FMPSMTlWWFLLSSSNMAAPPSL 361
Cdd:PRK07691 368 RYPVLG-WMFFIAALSLAGIPPL 389
|
|
| |
