|
Name |
Accession |
Description |
Interval |
E-value |
| ndhK |
CHL00023 |
NADH dehydrogenase subunit K |
1-228 |
0e+00 |
|
NADH dehydrogenase subunit K
Pssm-ID: 214337 Cd Length: 225 Bit Score: 526.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 1 MNSIEFPLFDRTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT 80
Cdd:CHL00023 1 MNSIEFPLLDRTTSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 81 ITMKMAPSLVRLYEQMPKPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:CHL00023 81 VTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISRE 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218527901 161 IYEDRISSQQENRCFTINHKFRIRRSTHTGNYDQGLLDQSPSTSTSrirPSENFFKYKSTVFSHELVN 228
Cdd:CHL00023 161 IYEDRIRSQQENRCFTTNHKFHVVRSTHTGNYDQELLYQSPSTSEI---PSETFFKYKSSVSSHELVN 225
|
|
| NuoB |
COG0377 |
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy ... |
20-160 |
4.36e-94 |
|
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy production and conversion]; NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440146 Cd Length: 152 Bit Score: 272.05 E-value: 4.36e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 20 TTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPK 98
Cdd:COG0377 2 TTLDKLVNWARKNSLWPLTFGLACCAIEMMAAGASRYDLERFGAeVPRASPRQADLMIVAGTVTKKMAPVLRRLYEQMPE 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 218527901 99 PKYVIAMGACTITGGMFStDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:COG0377 82 PKWVIAMGACAISGGPYW-DSYSVVQGVDKIIPVDVYVPGCPPRPEALLDGILKLQEKIRRE 142
|
|
| nuoB_fam |
TIGR01957 |
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that ... |
16-160 |
4.65e-88 |
|
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2. [Energy metabolism, Electron transport]
Pssm-ID: 273896 Cd Length: 145 Bit Score: 256.51 E-value: 4.65e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 16 SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYE 94
Cdd:TIGR01957 1 GVLLTTVDKLLNWGRSNSLWPLTFGLACCAIEMMATGASRYDLDRFGSeVFRASPRQADVMIVAGTVTKKMAPALRRLYD 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 218527901 95 QMPKPKYVIAMGACTITGGMFSTdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:TIGR01957 81 QMPEPKWVISMGACANSGGMFHT-SYSVVQGVDRIVPVDVYIPGCPPRPEALIYGLIKLQKKIKRE 145
|
|
| Oxidored_q6 |
pfam01058 |
NADH ubiquinone oxidoreductase, 20 Kd subunit; |
42-153 |
5.35e-40 |
|
NADH ubiquinone oxidoreductase, 20 Kd subunit;
Pssm-ID: 426021 [Multi-domain] Cd Length: 124 Bit Score: 133.48 E-value: 5.35e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 42 SCCFIEFASLIGSRFDF-----DRYGLVPRSSPR----QADLILTAGTITMKMAPSLVRLYEQMPKPKYVIAMGACTITG 112
Cdd:pfam01058 2 TGCTISLLALHPPLLDLldlisLRYGIPLMASPReipeGADVLLVEGAVTRKPKEALERLYEAAPKAKYVIAVGTCAAFG 81
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 218527901 113 GMFST-DSYST-VRGVDKLIPVDVYLPGCPPKPEAVIDAITKL 153
Cdd:pfam01058 82 GIPAAgNNPSYgVRPVLEVVPVDINIPGCPPHPEAILGTLLAL 124
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ndhK |
CHL00023 |
NADH dehydrogenase subunit K |
1-228 |
0e+00 |
|
NADH dehydrogenase subunit K
Pssm-ID: 214337 Cd Length: 225 Bit Score: 526.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 1 MNSIEFPLFDRTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT 80
Cdd:CHL00023 1 MNSIEFPLLDRTTSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 81 ITMKMAPSLVRLYEQMPKPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:CHL00023 81 VTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISRE 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218527901 161 IYEDRISSQQENRCFTINHKFRIRRSTHTGNYDQGLLDQSPSTSTSrirPSENFFKYKSTVFSHELVN 228
Cdd:CHL00023 161 IYEDRIRSQQENRCFTTNHKFHVVRSTHTGNYDQELLYQSPSTSEI---PSETFFKYKSSVSSHELVN 225
|
|
| PRK06411 |
PRK06411 |
NADH-quinone oxidoreductase subunit NuoB; |
1-160 |
8.53e-98 |
|
NADH-quinone oxidoreductase subunit NuoB;
Pssm-ID: 235797 Cd Length: 183 Bit Score: 282.64 E-value: 8.53e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 1 MNSIEFPLFDRTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT 80
Cdd:PRK06411 4 KDEIVTMGLEEELNKGVVLTTLDDLVNWARKNSLWPLTFGLACCAIEMMAAGTSRYDLDRFGMVFRASPRQADLMIVAGT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 81 ITMKMAPSLVRLYEQMPKPKYVIAMGACTITGGMFStDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK06411 84 LTNKMAPALRRLYDQMPEPKWVISMGSCANSGGMYH-YSYSVVQGVDRIVPVDVYVPGCPPRPEALLYGILKLQKKIRQS 162
|
|
| NuoB |
COG0377 |
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy ... |
20-160 |
4.36e-94 |
|
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy production and conversion]; NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440146 Cd Length: 152 Bit Score: 272.05 E-value: 4.36e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 20 TTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPK 98
Cdd:COG0377 2 TTLDKLVNWARKNSLWPLTFGLACCAIEMMAAGASRYDLERFGAeVPRASPRQADLMIVAGTVTKKMAPVLRRLYEQMPE 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 218527901 99 PKYVIAMGACTITGGMFStDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:COG0377 82 PKWVIAMGACAISGGPYW-DSYSVVQGVDKIIPVDVYVPGCPPRPEALLDGILKLQEKIRRE 142
|
|
| nuoB_fam |
TIGR01957 |
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that ... |
16-160 |
4.65e-88 |
|
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2. [Energy metabolism, Electron transport]
Pssm-ID: 273896 Cd Length: 145 Bit Score: 256.51 E-value: 4.65e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 16 SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYE 94
Cdd:TIGR01957 1 GVLLTTVDKLLNWGRSNSLWPLTFGLACCAIEMMATGASRYDLDRFGSeVFRASPRQADVMIVAGTVTKKMAPALRRLYD 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 218527901 95 QMPKPKYVIAMGACTITGGMFSTdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:TIGR01957 81 QMPEPKWVISMGACANSGGMFHT-SYSVVQGVDRIVPVDVYIPGCPPRPEALIYGLIKLQKKIKRE 145
|
|
| PRK14819 |
PRK14819 |
NADH-quinone oxidoreductase subunit B; |
14-160 |
6.44e-66 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 237822 Cd Length: 264 Bit Score: 204.45 E-value: 6.44e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 14 KNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRL 92
Cdd:PRK14819 13 KQGVLLTTVNRFYNWGRRSSVWPMAFGLACCAIEMMATGLSRYDLARFGAeLFRASPRQADLMIVAGTVTKKMAPQVVRL 92
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218527901 93 YEQMPKPKYVIAMGACTITGGMFStDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK14819 93 YNQMPEPRYVISMGACATSGGPFR-DGYNVLRGIDLLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQ 159
|
|
| PRK14816 |
PRK14816 |
NADH-quinone oxidoreductase subunit B; |
23-160 |
1.08e-63 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 173277 Cd Length: 182 Bit Score: 195.90 E-value: 1.08e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 23 NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPKPKY 101
Cdd:PRK14816 32 DDLINWGRSNSLWPLTFATSCCGIEFMALGAARYDMARFGFeVARASPRQADMIMVCGTITNKMAPVLKRLYDQMADPKY 111
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 218527901 102 VIAMGACTITGGMFSTdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK14816 112 VIAVGGCAVSGGPFKK-SYHVLNGVDKILPVDVYIPGCPPRPEAFYYGMMQLQRKVKIE 169
|
|
| PRK14815 |
PRK14815 |
NADH dehydrogenase subunit B; Provisional |
1-160 |
1.98e-63 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 237821 Cd Length: 183 Bit Score: 195.51 E-value: 1.98e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 1 MNSIEFPL-FDRTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTA 78
Cdd:PRK14815 1 MVTTNTTLtYESGVEGNVVVTTLDAAINWIRKNSLWPMPMGLACCAIELMAVACSRFDISRFGAeVMRFSPRQADVMIVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 79 GTITMKMAPSLVRLYEQMPKPKYVIAMGACTITGGMFStdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVS 158
Cdd:PRK14815 81 GTVTYKMALAVRRIYDQMPEPKWVIAMGACASSGGMYR--SYSVLQGVDRILPVDVYISGCPPRPEAILDALIKLQKKID 158
|
..
gi 218527901 159 RE 160
Cdd:PRK14815 159 TE 160
|
|
| PRK14813 |
PRK14813 |
NADH dehydrogenase subunit B; Provisional |
11-160 |
2.14e-63 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173274 Cd Length: 189 Bit Score: 195.49 E-value: 2.14e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 11 RTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTITMKMAPSLV 90
Cdd:PRK14813 7 GISNHNVLVTSVDNVLNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLMIVAGTVTMKMAERVV 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 91 RLYEQMPKPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK14813 87 RLYEQMPEPRYVLSMGSCSNCGGPYWEHGYHVLKGVDRIIPVDVYVPGCPPRPEALIGGLMKVQELIRME 156
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
12-160 |
1.56e-59 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 200.00 E-value: 1.56e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 12 TTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLV 90
Cdd:PRK13292 2 TIPENILLASLDDLINWGRANSLWPMFFGLSCCFVEMMTSFTSRYDISRFGAeVLRGTPREADLMVIAGTVFKKMAPSIL 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 91 RLYEQMPKPKYVIAMGACTITGGMFstDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK13292 82 RLYEQMAEPKWVISMGSCANSGGMY--DVYSVVQGVNQILPVDVYIPGCPPRPEAFLQGLMLLQEKIRRE 149
|
|
| PRK14818 |
PRK14818 |
NADH dehydrogenase subunit B; Provisional |
19-160 |
8.92e-58 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173279 Cd Length: 173 Bit Score: 180.53 E-value: 8.92e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 19 STTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPK 98
Cdd:PRK14818 18 TSQLDNLINLARASSLYYLTFGLACCGIELMQTGGPRADVMRFGAIPRASPRQADFMIVAGTLTYKMAERARLLYDQMPE 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 218527901 99 PKYVIAMGACTITGGMFSTdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSRE 160
Cdd:PRK14818 98 PKYVISMGSCSNCGGLFQL-GYSVCKGVDKVIPVDVYVPGCPPRPEALTEGLLRLQEIVRSE 158
|
|
| PRK14820 |
PRK14820 |
NADH-quinone oxidoreductase subunit B; |
19-172 |
9.75e-56 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 184833 Cd Length: 180 Bit Score: 175.79 E-value: 9.75e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 19 STTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLV-PRSSPRQADLILTAGTITMKMAPSLVRLYEQMP 97
Cdd:PRK14820 20 ATSLDSVIGLARKNSLWPLPFATSCCGIEFMATMASHYDLARFGSErPSFSPRQADMLMVMGTIAKKMAPVLKQVYLQMA 99
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 218527901 98 KPKYVIAMGACTITGGMFstDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSREIYEDRISSQQEN 172
Cdd:PRK14820 100 EPRWVVAVGACASSGGIF--DTYSVLQGIDRIIPVDVYVPGCPPRPEQIIDGVMRVQELVKNESLRRRNSPEYQE 172
|
|
| PRK14814 |
PRK14814 |
NADH dehydrogenase subunit B; Provisional |
21-165 |
4.92e-54 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173275 Cd Length: 186 Bit Score: 171.75 E-value: 4.92e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 21 TSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLV-PRSSPRQADLILTAGTITMKMAPSLVRLYEQMPKP 99
Cdd:PRK14814 22 NLESVIQWGRSFSLWPYPFATACCGIEYMSTACSDYDIARFGAErPSFSPRQADMILVLGTITYKMAPVLRQIYDQMAEP 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 218527901 100 KYVIAMGACTITGGMFSTdsYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSREIYEDR 165
Cdd:PRK14814 102 KFVISVGACASSGGMFHT--YGVLQGVDRILPVDVYVPGCPPRPEAILDALVKLQTKLKTQGLEAR 165
|
|
| HycG |
COG3260 |
Ni,Fe-hydrogenase III small subunit [Energy production and conversion]; |
33-161 |
4.35e-53 |
|
Ni,Fe-hydrogenase III small subunit [Energy production and conversion];
Pssm-ID: 442491 Cd Length: 137 Bit Score: 167.27 E-value: 4.35e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 33 SLWPLLYGT-SC--CFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPKPKYVIAMGACT 109
Cdd:COG3260 6 SLWIRHVDAgSCngCEIEILALLTPRYDLERFGIKFVASPRHADVLLVTGPVTRNMREALLRTYEAMPEPKVVVAVGDCA 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 218527901 110 ITGGMFsTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSREI 161
Cdd:COG3260 86 CSGGVF-RDSYAVLGGVDKVIPVDVYIPGCPPRPEAILDGLLKALGRLEEKL 136
|
|
| PRK14817 |
PRK14817 |
NADH-quinone oxidoreductase subunit B; |
28-163 |
1.20e-52 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 173278 Cd Length: 181 Bit Score: 167.83 E-value: 1.20e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 28 WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGL-VPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPKPKYVIAMG 106
Cdd:PRK14817 31 WARKYSLFTYPFVTACCGMEYMTMASARYDSDRFGAaMPRFSPRQADLLMVVGTVNCKQAPILQRVYEQMADPKWVMAFG 110
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 218527901 107 ACTITGGMFstDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSREIYE 163
Cdd:PRK14817 111 VCASSGGFY--DNYATVQGIDRIIPVDVYVPGCPPRPEQVLDGIMLLQKKIQNQSHK 165
|
|
| Oxidored_q6 |
pfam01058 |
NADH ubiquinone oxidoreductase, 20 Kd subunit; |
42-153 |
5.35e-40 |
|
NADH ubiquinone oxidoreductase, 20 Kd subunit;
Pssm-ID: 426021 [Multi-domain] Cd Length: 124 Bit Score: 133.48 E-value: 5.35e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 42 SCCFIEFASLIGSRFDF-----DRYGLVPRSSPR----QADLILTAGTITMKMAPSLVRLYEQMPKPKYVIAMGACTITG 112
Cdd:pfam01058 2 TGCTISLLALHPPLLDLldlisLRYGIPLMASPReipeGADVLLVEGAVTRKPKEALERLYEAAPKAKYVIAVGTCAAFG 81
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 218527901 113 GMFST-DSYST-VRGVDKLIPVDVYLPGCPPKPEAVIDAITKL 153
Cdd:pfam01058 82 GIPAAgNNPSYgVRPVLEVVPVDINIPGCPPHPEAILGTLLAL 124
|
|
| FrhG |
COG1941 |
Coenzyme F420-reducing hydrogenase, gamma subunit [Energy production and conversion]; |
100-153 |
1.38e-10 |
|
Coenzyme F420-reducing hydrogenase, gamma subunit [Energy production and conversion];
Pssm-ID: 441544 [Multi-domain] Cd Length: 262 Bit Score: 59.56 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527901 100 KYVIAMGACTITGG------MFSTD------------------------SYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA 149
Cdd:COG1941 79 KILVALGACAVTGGipalrnLYDLEellervygetpstnpqipgeelpeLLDRVRPLSEVVKVDYELPGCPPDPDQILEV 158
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....
gi 218527901 150 ITKL 153
Cdd:COG1941 159 LTAL 162
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