NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|215513644|gb|ACJ68479|]
View 

chalcone synthase, partial [Cardamine glauca]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PLN03173 super family cl30449
chalcone synthase; Provisional
2-302 0e+00

chalcone synthase; Provisional


The actual alignment was detected with superfamily member PLN03173:

Pssm-ID: 178717 [Multi-domain]  Cd Length: 391  Bit Score: 568.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:PLN03173  77 LKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEKP 161
Cdd:PLN03173 157 FMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKP 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 162 IFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 241
Cdd:PLN03173 236 LFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEA 315
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215513644 242 KLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03173 316 KLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPG 376
 
Name Accession Description Interval E-value
PLN03173 PLN03173
chalcone synthase; Provisional
2-302 0e+00

chalcone synthase; Provisional


Pssm-ID: 178717 [Multi-domain]  Cd Length: 391  Bit Score: 568.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:PLN03173  77 LKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEKP 161
Cdd:PLN03173 157 FMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKP 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 162 IFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 241
Cdd:PLN03173 236 LFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEA 315
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215513644 242 KLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03173 316 KLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPG 376
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
12-302 6.04e-139

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 396.60  E-value: 6.04e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  12 MAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYA 91
Cdd:cd00831   70 MSPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSA 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  92 GGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSdtHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQT 171
Cdd:cd00831  150 GAIALDLAKDLLEANPGARVLVVSTELCSLWYRGPD--HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAAST 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 172 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPL--GISDWNSLFWIAHPGGPAILDQVEIKLGLKAEK 249
Cdd:cd00831  228 LLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLgiGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPED 307
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 215513644 250 MRATRHVLSEYGNMSSACVLFILDEMRKKSAKdgvattgEGLEWGVLFGFGPG 302
Cdd:cd00831  308 LEASRMVLRRYGNMSSSSVLYVLAYMEAKGRV-------KRGDRGLLIAFGPG 353
Chal_sti_synt_N pfam00195
Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase ...
2-153 9.50e-102

Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.


Pssm-ID: 395142  Cd Length: 225  Bit Score: 297.15  E-value: 9.50e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644    2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:pfam00195  74 LDEHPELCTEMAPSLDARLEIANAEVPELGAEAALKAIKEWGQPKSKITHLVFCTTSGVRMPGADYQLAKLLGLRPSVKR 153
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 215513644   82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDP 153
Cdd:pfam00195 154 VMLYFQGCYGGATVLRTAKDIAENNPGARVLVVCSEITVLGFRGPSKDRLDSLVGAALFGDGAAAVIIGADP 225
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
13-302 2.16e-85

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 260.07  E-value: 2.16e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  13 APSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYAG 92
Cdd:COG3424   63 PPSFGERNALYIEEALELAEEAARRALDKAGLDPEDIDHLVTVSCTGFAAPGLDARLINRLGLRPDVRRLPVGGMGCAAG 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  93 GTVLRLAKDLAENNRGARVLVVCSEITAVTFRgPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGekpiFEMVSAAQTI 172
Cdd:COG3424  143 AAGLRRAADFLRADPDAVVLVVCVELCSLTFQ-RDDDSKDNLVANALFGDGAAAVVVSGDPRPGPG----PRILAFRSYL 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 173 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRA 252
Cdd:COG3424  218 IPDTEDVMGWDVGDTGFRMVLSPEVPDLIAEHLAPAVEPLLARHGLTIEDIDHWAVHPGGPKVLDAVEEALGLPPEALAH 297
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 215513644 253 TRHVLSEYGNMSSACVLFILDE-MRKKSAKDGvattgeglEWGVLFGFGPG 302
Cdd:COG3424  298 SREVLREYGNMSSATVLFVLERlLEEGAPAPG--------ERGLAMAFGPG 340
 
Name Accession Description Interval E-value
PLN03173 PLN03173
chalcone synthase; Provisional
2-302 0e+00

chalcone synthase; Provisional


Pssm-ID: 178717 [Multi-domain]  Cd Length: 391  Bit Score: 568.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:PLN03173  77 LKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEKP 161
Cdd:PLN03173 157 FMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKP 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 162 IFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 241
Cdd:PLN03173 236 LFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEA 315
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215513644 242 KLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03173 316 KLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPG 376
PLN03172 PLN03172
chalcone synthase family protein; Provisional
2-302 0e+00

chalcone synthase family protein; Provisional


Pssm-ID: 178716  Cd Length: 393  Bit Score: 564.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:PLN03172  77 LKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEKP 161
Cdd:PLN03172 157 FMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERP 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 162 IFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 241
Cdd:PLN03172 236 LFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEI 315
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215513644 242 KLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03172 316 KLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPG 376
PLN03170 PLN03170
chalcone synthase; Provisional
1-302 0e+00

chalcone synthase; Provisional


Pssm-ID: 178714 [Multi-domain]  Cd Length: 401  Bit Score: 561.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   1 FLKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVK 80
Cdd:PLN03170  80 YLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVN 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  81 RLMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEK 160
Cdd:PLN03170 160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ER 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 161 PIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVE 240
Cdd:PLN03170 239 PLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVE 318
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 215513644 241 IKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03170 319 AKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPG 380
PLN03168 PLN03168
chalcone synthase; Provisional
2-302 4.03e-162

chalcone synthase; Provisional


Pssm-ID: 178712 [Multi-domain]  Cd Length: 389  Bit Score: 456.42  E-value: 4.03e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:PLN03168  76 LKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKR 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVgEKP 161
Cdd:PLN03168 156 VMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKA 234
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 162 IFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 241
Cdd:PLN03168 235 LFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEA 314
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215513644 242 KLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03168 315 KLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPG 375
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
12-302 6.04e-139

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 396.60  E-value: 6.04e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  12 MAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYA 91
Cdd:cd00831   70 MSPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSA 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  92 GGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSdtHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQT 171
Cdd:cd00831  150 GAIALDLAKDLLEANPGARVLVVSTELCSLWYRGPD--HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAAST 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 172 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPL--GISDWNSLFWIAHPGGPAILDQVEIKLGLKAEK 249
Cdd:cd00831  228 LLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLgiGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPED 307
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 215513644 250 MRATRHVLSEYGNMSSACVLFILDEMRKKSAKdgvattgEGLEWGVLFGFGPG 302
Cdd:cd00831  308 LEASRMVLRRYGNMSSSSVLYVLAYMEAKGRV-------KRGDRGLLIAFGPG 353
PLN03171 PLN03171
chalcone synthase-like protein; Provisional
13-302 9.46e-124

chalcone synthase-like protein; Provisional


Pssm-ID: 178715 [Multi-domain]  Cd Length: 399  Bit Score: 359.70  E-value: 9.46e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  13 APSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYAG 92
Cdd:PLN03171  94 APSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAG 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  93 GTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSvgEKPIFEMVSAAQTI 172
Cdd:PLN03171 174 AAALRLAKDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAI 251
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 173 LPDSDGAIDGHLREVGLTFHL-LKDVPGLISKNIEKSLDEAFKPL----GISDWNSLFWIAHPGGPAILDQVEIKLGLKA 247
Cdd:PLN03171 252 IPESDDAINMHFTEGGLDGNIgTRQVPGLIGDNIERCLLDAFAPLlggdGGAEWNDLFWAVHPGSSAILDQVDAALGLEP 331
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 215513644 248 EKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKdgVATTGEGLEWGVLFGFGPG 302
Cdd:PLN03171 332 EKLAASRRVLSDYGNMFGATVIFALDELRRQMEE--AAAAGAWPELGVMMAFGPG 384
PLN03169 PLN03169
chalcone synthase family protein; Provisional
13-302 7.15e-106

chalcone synthase family protein; Provisional


Pssm-ID: 215612 [Multi-domain]  Cd Length: 391  Bit Score: 313.56  E-value: 7.15e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  13 APSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYAG 92
Cdd:PLN03169  92 TPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGG 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  93 GTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPdTSVGEKPIFEMVSAAQTI 172
Cdd:PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADP-IPVSESPFFELHTAIQQF 250
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 173 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGIS--DWNSLFWIAHPGGPAILDQVEIKLGLKAEKM 250
Cdd:PLN03169 251 LPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVekDYNDLFWAVHPGGPAILNRLEKKLKLAPEKL 330
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 215513644 251 RATRHVLSEYGNMSSACVLFILDEMRKKSAKDGvattGEGLEWGVLFGFGPG 302
Cdd:PLN03169 331 ECSRRALMDYGNVSSNTIVYVLEYMREELKKKG----EEDEEWGLILAFGPG 378
Chal_sti_synt_N pfam00195
Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase ...
2-153 9.50e-102

Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.


Pssm-ID: 395142  Cd Length: 225  Bit Score: 297.15  E-value: 9.50e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644    2 LKENANMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKR 81
Cdd:pfam00195  74 LDEHPELCTEMAPSLDARLEIANAEVPELGAEAALKAIKEWGQPKSKITHLVFCTTSGVRMPGADYQLAKLLGLRPSVKR 153
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 215513644   82 LMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDP 153
Cdd:pfam00195 154 VMLYFQGCYGGATVLRTAKDIAENNPGARVLVVCSEITVLGFRGPSKDRLDSLVGAALFGDGAAAVIIGADP 225
Chal_sti_synt_C pfam02797
Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is ...
164-302 6.15e-86

Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.


Pssm-ID: 397089  Cd Length: 151  Bit Score: 254.30  E-value: 6.15e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  164 EMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKL 243
Cdd:pfam02797   1 ELVSAAQTFLPNTDGVIDGHLTEEGLTFHLGRDVPQKIEENIEEFLKKAFEPLGISEWNSLFWIVHPGGPAILDRVETKL 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 215513644  244 GLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:pfam02797  81 GLEPEKLEASRRALMDYGNVSSATVLFILDEMRKKSLKKGLATTGEGLDWGVLLAFGPG 139
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
13-302 2.16e-85

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 260.07  E-value: 2.16e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  13 APSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYAG 92
Cdd:COG3424   63 PPSFGERNALYIEEALELAEEAARRALDKAGLDPEDIDHLVTVSCTGFAAPGLDARLINRLGLRPDVRRLPVGGMGCAAG 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  93 GTVLRLAKDLAENNRGARVLVVCSEITAVTFRgPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGekpiFEMVSAAQTI 172
Cdd:COG3424  143 AAGLRRAADFLRADPDAVVLVVCVELCSLTFQ-RDDDSKDNLVANALFGDGAAAVVVSGDPRPGPG----PRILAFRSYL 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 173 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRA 252
Cdd:COG3424  218 IPDTEDVMGWDVGDTGFRMVLSPEVPDLIAEHLAPAVEPLLARHGLTIEDIDHWAVHPGGPKVLDAVEEALGLPPEALAH 297
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 215513644 253 TRHVLSEYGNMSSACVLFILDE-MRKKSAKDGvattgeglEWGVLFGFGPG 302
Cdd:COG3424  298 SREVLREYGNMSSATVLFVLERlLEEGAPAPG--------ERGLAMAFGPG 340
cond_enzymes cd00327
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ...
27-302 2.62e-54

Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.


Pssm-ID: 238201 [Multi-domain]  Cd Length: 254  Bit Score: 177.25  E-value: 2.62e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  27 VPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLrPSVKRLMMYQqGCYAGGTVLRLAKDLAEN 105
Cdd:cd00327    7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGeFSGAAGQLAYHLGI-SGGPAYSVNQ-ACATGLTALALAVQQVQN 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 106 NRGARVLVVCSEItavtfrgpsdthldslvgqALFSDGAAALIVGSDPDTSV-GEKPIFEMVSAAQTILPDSDgaidghl 184
Cdd:cd00327   85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRrGAHPQAEIVSTAATFDGASM------- 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 185 revgltfhllkdVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMR--ATRHVLSEYGN 262
Cdd:cd00327  139 ------------VPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRspAVSATLIMTGH 206
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 215513644 263 MSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPG 302
Cdd:cd00327  207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLG 246
decarbox_cond_enzymes cd00825
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new ...
27-302 7.47e-53

decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).


Pssm-ID: 238421 [Multi-domain]  Cd Length: 332  Bit Score: 175.90  E-value: 7.47e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  27 VPKLGKEAAVKAIKEWG----QPKSKITHLVFCTTSGVD----------------------MPGADYQLTKLLGLrpSVK 80
Cdd:cd00825   11 VSILGFEAAERAIADAGlsreYQKNPIVGVVVGTGGGSPrfqvfgadamravgpyvvtkamFPGASGQIATPLGI--HGP 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  81 RLMMYQqGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDT------------HLDSLVGQALFSDGAAALI 148
Cdd:cd00825   89 AYDVSA-ACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAmgalstpekasrTFDAAADGFVFGDGAGALV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 149 VGSDPDTSV-GEKPIFEMVSAAQTIlpdsDGAIDGHLREVGltfhllkdvpglisKNIEKSLDEAFKPLGISDWNSLFWI 227
Cdd:cd00825  168 VEELEHALArGAHIYAEIVGTAATI----DGAGMGAFAPSA--------------EGLARAAKEALAVAGLTVWDIDYLV 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 228 AHPGGPAILDQVEIKLGLKA--EKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGVA------------------TT 287
Cdd:cd00825  230 AHGTGTPIGDVKELKLLRSEfgDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPpsihieeldeaglnivteTT 309
                        330
                 ....*....|....*
gi 215513644 288 GEGLEWGVLFGFGPG 302
Cdd:cd00825  310 PRELRTALLNGFGLG 324
init_cond_enzymes cd00827
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
27-302 8.78e-36

"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.


Pssm-ID: 238423 [Multi-domain]  Cd Length: 324  Bit Score: 131.02  E-value: 8.78e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  27 VPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRPSvkRLMMYQQGCYAGGTVLRLAKDLAEN 105
Cdd:cd00827   48 VPTMAVEAARRALERAGIDPDDIGLLIVATESPIDkGKSAATYLAELLGLTNA--EAFDLKQACYGGTAALQLAANLVES 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 106 NRGARVLVVCSEItavtFRGPSDTHLDslvGQALFSDGAAALIVGSDPDtsvgeKPIFEMVSAAQTILPDSD----GAID 181
Cdd:cd00827  126 GPWRYALVVASDI----ASYLLDEGSA---LEPTLGDGAAAMLVSRNPG-----ILAAGIVSTHSTSDPGYDfspyPVMD 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 182 GHLREVGLTFHLL--------KDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRAT 253
Cdd:cd00827  194 GGYPKPCKLAYAIrltaepagRAVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQT 273
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 215513644 254 RH-VLSEYGNMSSACVLFILDEMRKKsakdGVATTGEGLewgVLFGFGPG 302
Cdd:cd00827  274 RWiLLRRVGNMYAASILLGLASLLES----GKLKAGDRV---LLFSYGSG 316
PksG COG3425
3-hydroxy-3-methylglutaryl CoA synthase [Lipid transport and metabolism]; ...
20-154 4.16e-16

3-hydroxy-3-methylglutaryl CoA synthase [Lipid transport and metabolism]; 3-hydroxy-3-methylglutaryl CoA synthase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 442651 [Multi-domain]  Cd Length: 382  Bit Score: 77.91  E-value: 4.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  20 QDIVVvevpkLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDM--PGADYqLTKLLGLRPSVkRLMMYQQGCYAGGTVLR 97
Cdd:COG3425   49 EDAVT-----MAANAARRALDRAGIDPSDIGAVYVGTESGPDAskPIATY-VHGALGLPPNC-RAFELKFACYAGTAALQ 121
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 215513644  98 LAKDLAENNRGARVLVVCSEItavtfrgpSDTHLDSlVGQALFSDGAAALIVGSDPD 154
Cdd:COG3425  122 AALGWVASGPNKKALVIASDI--------ARYGPGS-AGEYTQGAGAVAMLVGADPR 169
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
30-294 1.49e-11

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 64.10  E-value: 1.49e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  30 LGKEAAVKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLrpsvKRLMMY--QQGC----YAggtvLRLAKDL 102
Cdd:cd00830   53 LAVEAAKKALEDAGIDADDIDLIIVATSTPDYlFPATACLVQARLGA----KNAAAFdiNAACsgflYG----LSTAAGL 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 103 AENNRGARVLVVCSEITA--VTFRGPSdTHLdslvgqaLFSDGAAALIVGSDPDT---------SVGEKPIFEMVSAAQT 171
Cdd:cd00830  125 IRSGGAKNVLVVGAETLSriLDWTDRS-TAV-------LFGDGAGAVVLEATEEDpgildsvlgSDGSGADLLTIPAGGS 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 172 ILPDSDGAIDGHL-----REVgltfhlLKDVPGLISKNIEKSLDEA-FKPLGIsDWnslFWIaHPGGPAILDQVEIKLGL 245
Cdd:cd00830  197 RSPFEDAEGGDPYlvmdgREV------FKFAVRLMPESIEEALEKAgLTPDDI-DW---FVP-HQANLRIIEAVAKRLGL 265
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 215513644 246 KAEKMRatrHVLSEYGNMSSACVLFILDEM-RKKSAKDG----VATTGEGLEWG 294
Cdd:cd00830  266 PEEKVV---VNLDRYGNTSAASIPLALDEAiEEGKLKKGdlvlLLGFGAGLTWG 316
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
30-294 2.57e-09

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 57.43  E-value: 2.57e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  30 LGKEAAVKAIKEWGQPKSKITHLVFCTTSGvDM--PGADYQLTKLLGLRpsvkrlmmyqqGCYA-------GGTV--LRL 98
Cdd:COG0332   54 LAVEAARKALEAAGIDPEDIDLIIVATVTP-DYlfPSTACLVQHKLGAK-----------NAAAfdinaacSGFVyaLSV 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  99 AKDLAENNRGARVLVVCSEI-TAVTFRGPSDTHLdslvgqaLFSDGAAALIVGSDPDT---------SVGEKPIFEMVSA 168
Cdd:COG0332  122 AAALIRSGQAKNVLVVGAETlSRIVDWTDRSTCV-------LFGDGAGAVVLEASEEGpgilgsvlgSDGSGADLLVVPA 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 169 AQTILPDSDGAI-DGHLREVGltfhllKDVPGLISKNIEKSLDEAFKPLGIS----DWnslfWIAHPGGPAILDQVEIKL 243
Cdd:COG0332  195 GGSRNPPSPVDEgDHYLRMDG------REVFKFAVRNLPEVIREALEKAGLTlddiDW----FIPHQANLRIIEAVAKRL 264
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 215513644 244 GLKAEKMRATrhvLSEYGNMSSACVLFILDEM-RKKSAKDG----VATTGEGLEWG 294
Cdd:COG0332  265 GLPEEKVVVN---IDRYGNTSAASIPLALDEAlREGRIKPGdlvlLAGFGAGLTWG 317
PRK07204 PRK07204
beta-ketoacyl-ACP synthase III;
30-268 3.54e-07

beta-ketoacyl-ACP synthase III;


Pssm-ID: 235964  Cd Length: 329  Bit Score: 50.99  E-value: 3.54e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  30 LGKEAAVKAIKEWGQPKSKITHLV-FCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCYAGGTVLRLAKDLAENNRG 108
Cdd:PRK07204  55 MGAEAAKKAVEDAKLTLDDIDCIIcASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRY 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 109 ARVLVVCSEITAVtfrGPSDTHLDSLVgqaLFSDGAAALIVGSDPDTS---------VGEKPIFEMVSAAQTILPDSDGA 179
Cdd:PRK07204 135 KRVLIISSEISSV---GLNWGQNESCI---LFGDGAAAVVITKGDHSSrilashmetYSSGAHLSEIRGGGTMIHPREYS 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 180 IDghlREVGLTFHLL-KDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRAtrhVLS 258
Cdd:PRK07204 209 EE---RKEDFLFDMNgRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVT---IFE 282
                        250
                 ....*....|
gi 215513644 259 EYGNMSSACV 268
Cdd:PRK07204 283 DHGNMIAASI 292
PLN02854 PLN02854
3-ketoacyl-CoA synthase
75-300 8.96e-07

3-ketoacyl-CoA synthase


Pssm-ID: 215459  Cd Length: 521  Bit Score: 49.96  E-value: 8.96e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  75 LRPSVKRLMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLdsLVGQALFSDGAAALIVGSDPD 154
Cdd:PLN02854 236 LRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSM--LLCNCIFRMGGAAVLLSNKAR 313
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 155 TSVGEKpiFEMVSAAQTilpdSDGAIDGHLR------------EVGLTFHLLKDVPGLISKNI----------------- 205
Cdd:PLN02854 314 DRKRSK--YQLVHTVRT----HKGADDKNYNcvyqreddkgtiGVSLARELMAVAGDALKTNIttlgplvlplseqfmff 387
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 206 -----EKSLDEAFKPLgISDWNSLF--WIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFildEMRKK 278
Cdd:PLN02854 388 vtlvrRKLLKAKVKPY-IPDFKLAFehFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWY---ELAYT 463
                        250       260
                 ....*....|....*....|..
gi 215513644 279 SAKdGVATTGEGLeWGVLFGFG 300
Cdd:PLN02854 464 EAK-GRVSAGDRV-WQIAFGSG 483
PLN02377 PLN02377
3-ketoacyl-CoA synthase
75-300 6.44e-06

3-ketoacyl-CoA synthase


Pssm-ID: 166018  Cd Length: 502  Bit Score: 47.32  E-value: 6.44e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  75 LRPSVKRLMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSE-ITAVTFRGPSDThldSLVGQALFSDGAAALIVGSDp 153
Cdd:PLN02377 220 LRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTEnITQNWYFGNKKS---MLIPNCLFRVGGSAVLLSNK- 295
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 154 dTSVGEKPIFEMVSAAQTILPDSDGAI--------DGHLREVGLTFHLLKDVPGLISKNI-------------------- 205
Cdd:PLN02377 296 -SRDKRRSKYKLVHVVRTHRGADDKAFrcvyqeqdDAGKTGVSLSKDLMAIAGEALKTNIttlgplvlpiseqllffatl 374
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 206 --EKSLDEAFKPLgISDWNSLF--WIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKsak 281
Cdd:PLN02377 375 vvKKLFNKKMKPY-IPDFKLAFdhFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK--- 450
                        250
                 ....*....|....*....
gi 215513644 282 dGVATTGEGLeWGVLFGFG 300
Cdd:PLN02377 451 -GRMRKGNRV-WQIAFGSG 467
PRK12879 PRK12879
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
139-302 7.79e-06

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 237245 [Multi-domain]  Cd Length: 325  Bit Score: 46.78  E-value: 7.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 139 LFSDGAAALIVGSDPDT---------SVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTfhLLKDVPGLISKNIEKSL 209
Cdd:PRK12879 158 LFGDGAGAVVLEATENEpgfidyvlgTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGRE--VFKWAVRTMPKGARQVL 235
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 210 DEAfkplGIS----DWnslfWIAHPGGPAILDQVEIKLGLKAEKmraTRHVLSEYGNMSSACVLFILDEMRkksaKDGVA 285
Cdd:PRK12879 236 EKA----GLTkddiDW----VIPHQANLRIIESLCEKLGIPMEK---TLVSVEYYGNTSAATIPLALDLAL----EQGKI 300
                        170
                 ....*....|....*..
gi 215513644 286 TTGEGLewgVLFGFGPG 302
Cdd:PRK12879 301 KPGDTL---LLYGFGAG 314
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
227-294 8.70e-05

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 40.56  E-value: 8.70e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 215513644  227 IAHPGGPAILDQVEIKLGLKAEKMRATrhvLSEYGNMSSACVLFILDEM-RKKSAKDG----VATTGEGLEWG 294
Cdd:pfam08541  15 VPHQANLRIIDAVAKRLGLPPEKVVVN---LDEYGNTSAASIPLALDEAvEEGKLKPGdlvlLVGFGAGLTWG 84
PLN02326 PLN02326
3-oxoacyl-[acyl-carrier-protein] synthase III
139-294 8.95e-05

3-oxoacyl-[acyl-carrier-protein] synthase III


Pssm-ID: 215185  Cd Length: 379  Bit Score: 43.57  E-value: 8.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 139 LFSDGAAALIVGS--DPDTSV----------GEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLL------------ 194
Cdd:PLN02326 200 LFGDGAGAVVLQAcdDDEDGLlgfdmhsdgnGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIqmngkevfkfav 279
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 195 KDVPglisKNIEKSLDEAFKPLGISDWNSLfwiaHPGGPAILDQVEIKLGLKAEKMRATrhvLSEYGNMSSACVLFILDE 274
Cdd:PLN02326 280 RCVP----QVIESALQKAGLTAESIDWLLL----HQANQRIIDAVAQRLGIPPEKVISN---LANYGNTSAASIPLALDE 348
                        170       180
                 ....*....|....*....|....*
gi 215513644 275 -MR--KKSAKDGVATT--GEGLEWG 294
Cdd:PLN02326 349 aVRsgKVKKGDVIATAgfGAGLTWG 373
FAE1_CUT1_RppA pfam08392
FAE1/Type III polyketide synthase-like protein; The members of this family are described as ...
74-166 1.72e-04

FAE1/Type III polyketide synthase-like protein; The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.


Pssm-ID: 429970  Cd Length: 290  Bit Score: 42.23  E-value: 1.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644   74 GLRPSVKRLMMYQQGCYAGGTVLRLAKDLAENNRGARVLVVCSE-ITAVTFRGpSDTHLdsLVGQALFSDGAAALIVGSD 152
Cdd:pfam08392 130 KLRSDIKSYNLSGMGCSAGLISIDLAKNLLQVHPNTYALVVSTEnITPNWYFG-NDRSM--LLPNCLFRMGGAAVLLSNR 206
                          90
                  ....*....|....
gi 215513644  153 PDTSVGEKpiFEMV 166
Cdd:pfam08392 207 PADRRRAK--YELV 218
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
86-158 6.44e-04

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 37.88  E-value: 6.44e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 215513644   86 QQGCYAGGTVLRLAKDLAENNRGARVLVVCSEI-TAVTFRGPSDTHLdslvgqaLFSDGAAALIVGSDPDTSVG 158
Cdd:pfam08545   4 NAACSGFVYALSTAAALIRSGRAKNVLVIGAETlSKILDWTDRSTAV-------LFGDGAGAVVLEATDEPGAR 70
PLN02192 PLN02192
3-ketoacyl-CoA synthase
88-300 2.01e-03

3-ketoacyl-CoA synthase


Pssm-ID: 215123  Cd Length: 511  Bit Score: 39.57  E-value: 2.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644  88 GCYAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLdsLVGQALFSDGAAALIVG---SD--------PDTS 156
Cdd:PLN02192 237 GCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSM--LVSNCLFRMGGAAILLSnkrSDrrrskyqlVHTV 314
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 157 VGEKPIFEMVSAAQTILPDSDGAIDghlreVGLTFHLLKDVPGLISKNI----------------------EKSLDEAFK 214
Cdd:PLN02192 315 RTHKGADDKCFACVTQEEDSAGKIG-----VSLSKDLMAVAGDALKTNIttlgplvlpmseqllffatlvgKKLFKMKLK 389
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215513644 215 PLgISDWNSLF--WIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFildEMRKKSAKdGVATTGEGLe 292
Cdd:PLN02192 390 PY-IPDFKLAFehFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWY---ELAYSEAK-GRIKKGDRT- 463

                 ....*...
gi 215513644 293 WGVLFGFG 300
Cdd:PLN02192 464 WQIAFGSG 471
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH