NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|215401166|ref|YP_002332421|]
View 

DUF2951 domain-containing protein [Staphylococcus phage phiSauS-IPLA35]

Protein Classification

DUF2951 domain-containing protein( domain architecture ID 10567694)

DUF2951 domain-containing protein similar to Staphylococcus phage phiPVL ORF17-like protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DUF2951 pfam11166
Protein of unknown function (DUF2951); This family of proteins has no known function. It has a ...
2-99 7.97e-43

Protein of unknown function (DUF2951); This family of proteins has no known function. It has a highly conserved sequence.


:

Pssm-ID: 288067  Cd Length: 98  Bit Score: 135.05  E-value: 7.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215401166   2 FGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLI 81
Cdd:pfam11166  1 FGFFKKHEHDWRIRRLEENDKTMFEKFDEIEDGLKTQEKINDKLDKNFDAIQKDKEEDEKNKEENAKNIRDIKMWILGLI 80
                         90
                 ....*....|....*...
gi 215401166  82 GTILSTFVIALLKTIFGI 99
Cdd:pfam11166 81 GTIFGSFIIALLKMIFGI 98
 
Name Accession Description Interval E-value
DUF2951 pfam11166
Protein of unknown function (DUF2951); This family of proteins has no known function. It has a ...
2-99 7.97e-43

Protein of unknown function (DUF2951); This family of proteins has no known function. It has a highly conserved sequence.


Pssm-ID: 288067  Cd Length: 98  Bit Score: 135.05  E-value: 7.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215401166   2 FGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLI 81
Cdd:pfam11166  1 FGFFKKHEHDWRIRRLEENDKTMFEKFDEIEDGLKTQEKINDKLDKNFDAIQKDKEEDEKNKEENAKNIRDIKMWILGLI 80
                         90
                 ....*....|....*...
gi 215401166  82 GTILSTFVIALLKTIFGI 99
Cdd:pfam11166 81 GTIFGSFIIALLKMIFGI 98
 
Name Accession Description Interval E-value
DUF2951 pfam11166
Protein of unknown function (DUF2951); This family of proteins has no known function. It has a ...
2-99 7.97e-43

Protein of unknown function (DUF2951); This family of proteins has no known function. It has a highly conserved sequence.


Pssm-ID: 288067  Cd Length: 98  Bit Score: 135.05  E-value: 7.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215401166   2 FGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLI 81
Cdd:pfam11166  1 FGFFKKHEHDWRIRRLEENDKTMFEKFDEIEDGLKTQEKINDKLDKNFDAIQKDKEEDEKNKEENAKNIRDIKMWILGLI 80
                         90
                 ....*....|....*...
gi 215401166  82 GTILSTFVIALLKTIFGI 99
Cdd:pfam11166 81 GTIFGSFIIALLKMIFGI 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH