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Conserved domains on  [gi|215401164|ref|YP_002332419|]
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tail fiber protein [Staphylococcus phage phiSauS-IPLA35]

Protein Classification

DUF2977 domain-containing protein( domain architecture ID 10567807)

DUF2977 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2977 pfam11192
Protein of unknown function (DUF2977); This family of proteins has no known function.
 1-59 5.76e-23

Protein of unknown function (DUF2977); This family of proteins has no known function.


:

Pssm-ID: 288092  Cd Length: 61  Bit Score: 84.78  E-value: 5.76e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215401164    1 MQILVNKRNEIISYAIIGGFEEGIDIE--NLPENFSQVFRPKAFKYSNGEIVFNEDYSEEK 59
Cdd:pfam11192   1 MQIKINDKNEIISYALVGGLENSIDYDesNLPEDFLTEFKPKAYKLIDGEIVKNPNYAEPQ 61
 
Name Accession Description Interval E-value
DUF2977 pfam11192
Protein of unknown function (DUF2977); This family of proteins has no known function.
 1-59 5.76e-23

Protein of unknown function (DUF2977); This family of proteins has no known function.


Pssm-ID: 288092  Cd Length: 61  Bit Score: 84.78  E-value: 5.76e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215401164    1 MQILVNKRNEIISYAIIGGFEEGIDIE--NLPENFSQVFRPKAFKYSNGEIVFNEDYSEEK 59
Cdd:pfam11192   1 MQIKINDKNEIISYALVGGLENSIDYDesNLPEDFLTEFKPKAYKLIDGEIVKNPNYAEPQ 61
 
Name Accession Description Interval E-value
DUF2977 pfam11192
Protein of unknown function (DUF2977); This family of proteins has no known function.
 1-59 5.76e-23

Protein of unknown function (DUF2977); This family of proteins has no known function.


Pssm-ID: 288092  Cd Length: 61  Bit Score: 84.78  E-value: 5.76e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 215401164    1 MQILVNKRNEIISYAIIGGFEEGIDIE--NLPENFSQVFRPKAFKYSNGEIVFNEDYSEEK 59
Cdd:pfam11192   1 MQIKINDKNEIISYALVGGLENSIDYDesNLPEDFLTEFKPKAYKLIDGEIVKNPNYAEPQ 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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