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Conserved domains on  [gi|21313679|ref|NP_082138|]
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ATP synthase subunit d, mitochondrial [Mus musculus]

Protein Classification

ATP synthase subunit d family protein( domain architecture ID 10531209)

ATP synthase subunit d family protein may be part of the Fo complex of a mitochondrial FoF1-ATP synthase, which produces ATP from ADP in the presence of a proton gradient across the membrane that is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mt_ATP-synt_D pfam05873
ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D ...
 3-155 1.14e-79

ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D chain, mitochondrial (ATP5H) proteins. Subunit d has no extensive hydrophobic sequences, and is not apparently related to any subunit described in the simpler ATP synthases in bacteria and chloroplasts.


:

Pssm-ID: 461764 [Multi-domain]  Cd Length: 154  Bit Score: 232.51  E-value: 1.14e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313679     3 GRKLALKTIDWVSFVEVMPQNQKAIGNALKSWNETFHARLASLSEKPPAIDWAYYRANVAKPGLVDDFEKKYNALKIPVP 82
Cdd:pfam05873   1 AKRIALKAINWAALAERVPPNQKAQFNAFKAKSDEYLRRVAALPEEPPKIDWAYYKKNVAKPGLVDDFEKKYEALKIPYP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 21313679    83 EDKYTALVDQEEKEDVKSCAEFVSGSQLRIQEYEKQLEKMRNIIPFDQMTIDDLNEIFPETKLDKKKYP-YWPH 155
Cdd:pfam05873  81 EDTYTSEVDAQEKEVVKEIKEFIEESNKRIAEYEKELEKLKNLLPFEQMTMEDFCEAFPELALDPINKPtFWPH 154
 
Name Accession Description Interval E-value
Mt_ATP-synt_D pfam05873
ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D ...
 3-155 1.14e-79

ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D chain, mitochondrial (ATP5H) proteins. Subunit d has no extensive hydrophobic sequences, and is not apparently related to any subunit described in the simpler ATP synthases in bacteria and chloroplasts.


Pssm-ID: 461764 [Multi-domain]  Cd Length: 154  Bit Score: 232.51  E-value: 1.14e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313679     3 GRKLALKTIDWVSFVEVMPQNQKAIGNALKSWNETFHARLASLSEKPPAIDWAYYRANVAKPGLVDDFEKKYNALKIPVP 82
Cdd:pfam05873   1 AKRIALKAINWAALAERVPPNQKAQFNAFKAKSDEYLRRVAALPEEPPKIDWAYYKKNVAKPGLVDDFEKKYEALKIPYP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 21313679    83 EDKYTALVDQEEKEDVKSCAEFVSGSQLRIQEYEKQLEKMRNIIPFDQMTIDDLNEIFPETKLDKKKYP-YWPH 155
Cdd:pfam05873  81 EDTYTSEVDAQEKEVVKEIKEFIEESNKRIAEYEKELEKLKNLLPFEQMTMEDFCEAFPELALDPINKPtFWPH 154
 
Name Accession Description Interval E-value
Mt_ATP-synt_D pfam05873
ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D ...
 3-155 1.14e-79

ATP synthase D chain, mitochondrial (ATP5H); This family consists of several ATP synthase D chain, mitochondrial (ATP5H) proteins. Subunit d has no extensive hydrophobic sequences, and is not apparently related to any subunit described in the simpler ATP synthases in bacteria and chloroplasts.


Pssm-ID: 461764 [Multi-domain]  Cd Length: 154  Bit Score: 232.51  E-value: 1.14e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313679     3 GRKLALKTIDWVSFVEVMPQNQKAIGNALKSWNETFHARLASLSEKPPAIDWAYYRANVAKPGLVDDFEKKYNALKIPVP 82
Cdd:pfam05873   1 AKRIALKAINWAALAERVPPNQKAQFNAFKAKSDEYLRRVAALPEEPPKIDWAYYKKNVAKPGLVDDFEKKYEALKIPYP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 21313679    83 EDKYTALVDQEEKEDVKSCAEFVSGSQLRIQEYEKQLEKMRNIIPFDQMTIDDLNEIFPETKLDKKKYP-YWPH 155
Cdd:pfam05873  81 EDTYTSEVDAQEKEVVKEIKEFIEESNKRIAEYEKELEKLKNLLPFEQMTMEDFCEAFPELALDPINKPtFWPH 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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