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Conserved domains on  [gi|2131004111|ref|XP_044889443|]
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zinc finger protein 687 [Felis catus]

Protein Classification

zf-C2H2_11 domain-containing protein( domain architecture ID 11244367)

zf-C2H2_11 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-C2H2_11 pfam16622
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.
 1132-1158 1.13e-09

zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.


:

Pssm-ID: 465205  Cd Length: 27  Bit Score: 54.36  E-value: 1.13e-09
                           10        20
                   ....*....|....*....|....*..
gi 2131004111 1132 GAQQCLDCGLCFASPGSLSRHRFISHK 1158
Cdd:pfam16622    1 STCQCLLCGLCFTSQGSLSRHLFIVHK 27
zf-C2H2_8 super family cl25789
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 792-874 9.63e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


The actual alignment was detected with superfamily member pfam15909:

Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.01  E-value: 9.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131004111  792 PICPMAFKSAPSAHAHLYTQHPSFHAQQAKMiYKCAM--CDTVFTHKPLLSSHFDQHLLPQRVsvFKCPSCPLLFAQKRT 869
Cdd:pfam15909    5 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKL-FRCSAlsCTETFPSMQELVAHSKLHYKPNRY--FKCENCLLRFRTHRS 81


                   ....*
gi 2131004111  870 MLDHL 874
Cdd:pfam15909   82 LFKHL 86
 
Name Accession Description Interval E-value
zf-C2H2_11 pfam16622
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.
 1132-1158 1.13e-09

zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.


Pssm-ID: 465205  Cd Length: 27  Bit Score: 54.36  E-value: 1.13e-09
                           10        20
                   ....*....|....*....|....*..
gi 2131004111 1132 GAQQCLDCGLCFASPGSLSRHRFISHK 1158
Cdd:pfam16622    1 STCQCLLCGLCFTSQGSLSRHLFIVHK 27
zf-C2H2_8 pfam15909
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 792-874 9.63e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.01  E-value: 9.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131004111  792 PICPMAFKSAPSAHAHLYTQHPSFHAQQAKMiYKCAM--CDTVFTHKPLLSSHFDQHLLPQRVsvFKCPSCPLLFAQKRT 869
Cdd:pfam15909    5 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKL-FRCSAlsCTETFPSMQELVAHSKLHYKPNRY--FKCENCLLRFRTHRS 81


                   ....*
gi 2131004111  870 MLDHL 874
Cdd:pfam15909   82 LFKHL 86
 
Name Accession Description Interval E-value
zf-C2H2_11 pfam16622
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.
 1132-1158 1.13e-09

zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes.


Pssm-ID: 465205  Cd Length: 27  Bit Score: 54.36  E-value: 1.13e-09
                           10        20
                   ....*....|....*....|....*..
gi 2131004111 1132 GAQQCLDCGLCFASPGSLSRHRFISHK 1158
Cdd:pfam16622    1 STCQCLLCGLCFTSQGSLSRHLFIVHK 27
zf-C2H2_8 pfam15909
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 792-874 9.63e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.01  E-value: 9.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131004111  792 PICPMAFKSAPSAHAHLYTQHPSFHAQQAKMiYKCAM--CDTVFTHKPLLSSHFDQHLLPQRVsvFKCPSCPLLFAQKRT 869
Cdd:pfam15909    5 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKL-FRCSAlsCTETFPSMQELVAHSKLHYKPNRY--FKCENCLLRFRTHRS 81


                   ....*
gi 2131004111  870 MLDHL 874
Cdd:pfam15909   82 LFKHL 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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