|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-556 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 608.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 2 LNNFYLSSLFFLVCGFISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSS 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 82 DLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 162 FGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 242 KINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGML 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 322 DNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 402 ISLFSFNTLYNFS-TGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVLLGLYFGYLLSLSCVNMS 480
Cdd:MTH00165 401 SGDFNLKSLNNLSdESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2130626264 481 NMC-NSSFFLDFFSLMWFMPLLSTKLVSGITLTMGGKYCSFLDYGWLEYYGAQGLYGFFIYFIKQYLGLFDYNFKTY 556
Cdd:MTH00165 481 LKSlKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIY 557
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-538 |
1.58e-171 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 497.83 E-value: 1.58e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 7 LSSLFFLVCGFISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSD 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 87 RFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 167 YIYYYDYFFcsydYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FFSKINS 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 246 ILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 326 IRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLF 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 406 SFNTLYNFSTGRDMYS-GMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVLLGLYFGYLLSLSCVNMSNMCN 484
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSlPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK 481
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2130626264 485 SSFfldFFSLMWFMPLLSTKLVSGITLTMGGKYCSFLDYGWLEYYGAQGLYGFF 538
Cdd:MTH00151 482 LSF---FFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKAN 532
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
17-543 |
4.45e-158 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 463.73 E-value: 4.45e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFV 96
Cdd:MTH00209 14 LFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 97 LSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYiyyydyFFC 176
Cdd:MTH00209 94 LSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNI------FYL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 177 SYDY---SVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-INSILLLIGC 252
Cdd:MTH00209 168 NFNSnlgSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPfFSMSLLLLGS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 253 LTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSL 332
Cdd:MTH00209 248 LTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 333 TLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFNTLYN 412
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 413 -FSTGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVllGLYFGYLLSLSCVNMSNMCNSSFFLdF 491
Cdd:MTH00209 408 sFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLI--LFGVLLMYMVLKKNFFLIKGYKVNY-F 484
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 2130626264 492 FSLMWFMPLLSTKLVSGITLTMGGKYCSFLDYGWLEYYGAQGLYGFFIYFIK 543
Cdd:MTH00209 485 LSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSK 536
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-535 |
8.52e-157 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 460.77 E-value: 8.52e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 1 MLNNFYLSSLFFLVCGFISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMS 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 81 SDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 161 NFGSWNYIYYYDYFFcsydYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF- 239
Cdd:MTH00207 163 NQGHWSITNMWQTDM----NNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 240 FSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHG 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 320 MLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 400 SLIS-LFSFNTLYNFSTGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVLLGLYFGYLLSLSCVN 478
Cdd:MTH00207 399 VLWSpNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNIT 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626264 479 MSNMCNSSFFLDFFS-LMWFMPLLSTKLVSGITLTMGGKYCSFLDYGWLEYYGAQGLY 535
Cdd:MTH00207 479 KTPLLINNPLSHFAScLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTF 536
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-556 |
9.09e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 343.09 E-value: 9.09e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 1 MLNNFYLSSLFFLVCGFISFLVSLAFMLYDV--SYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDY 78
Cdd:MTH00211 23 PLNNSKLHIKKAVKLSFFISLIPLLIFLDQGleTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 79 MSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTAL-SNRIGDVFILLSIS 157
Cdd:MTH00211 103 MSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 158 WML-NFGSWNYiyyYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:MTH00211 183 WLLlNLNSWEI---SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 237 MLFFSK-INSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00211 260 LFQNNQlILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 316 YIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFR 395
Cdd:MTH00211 340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 396 LLYYSLISLFSFNTLYNFSTGRDMY-SGMFILLLFTVFGGSLLSWLIFPT-PICVYLPLGLKLLTILVvllgLYFGYLLS 473
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENYKLLkNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLV----TIVGLLLG 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 474 LSCVNMSNMCNSSFFLDFFSLMWFMPLLSTKLVSGITLTMGGKYC-SFLDYGWLEYYGAQGLYGFFIYFIKQYLGLFDYN 552
Cdd:MTH00211 496 LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGL 575
|
....
gi 2130626264 553 FKTY 556
Cdd:MTH00211 576 IKSY 579
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
18-534 |
1.36e-91 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 293.22 E-value: 1.36e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 18 ISFLVSLA----FMLYDV-SYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLV 92
Cdd:MTH00004 42 LAFLISLIpltlFLNSGTeSITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 93 SLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSISWM-LNFGSWNYiyy 170
Cdd:MTH00004 122 LIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI--- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 171 yDYFFCSYDYSVICFM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKIN-SILL 248
Cdd:MTH00004 199 -QQLFSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTAlTICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 249 LIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRG 328
Cdd:MTH00004 278 CLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 329 MGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFN 408
Cdd:MTH00004 358 MGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTP 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 409 TLYNFS-TGRDMYSGMFILLLFTVFGGSLLSWLIFPT-PICVYLPLGLKLLTILVVLLGLYFGYLLSLSCVNMSNMCNSS 486
Cdd:MTH00004 438 PTTPINeNTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNT 517
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 2130626264 487 FFLDFFSLMWFMPLLStKLVSGITLTMGGKYCSFL-DYGWLEYYGAQGL 534
Cdd:MTH00004 518 LHNFSNQLAFFNPLTH-RLLPMTLLKSSQKIATHLiDLSWLEKMGPKGL 565
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-467 |
1.36e-88 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 285.51 E-value: 1.36e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 5 FYLSSLFFLVCGFISFLVSLAFMLYDV-SYLIEWeiYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDL 83
Cdd:COG1009 31 GWLAALAPLAAFVLSLLLFPAVLGGEVvVELYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 84 SSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSISWMLN- 161
Cdd:COG1009 109 GLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAi 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 162 FGSWNY---IYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 238
Cdd:COG1009 189 AGTLNFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLF 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 239 FFSKI-NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYI 317
Cdd:COG1009 269 ALSPVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVI 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 318 HGMlDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVC-SFNCMNYFIYFLFFFSTGLTASYSFRL 396
Cdd:COG1009 349 HAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRL 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 397 LYYSLISLFSFNTLYNFS-TGRDMYSGMFILLLFTVFGGSLLSWL---------IFPTPICVYLPLGLKLLTILVVLLGL 466
Cdd:COG1009 428 FFLVFFGKPRPKTPKHPHeSPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGI 507
|
.
gi 2130626264 467 Y 467
Cdd:COG1009 508 A 508
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
17-543 |
3.40e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 281.80 E-value: 3.40e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAFMLYDV-SYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLF 95
Cdd:MTH00066 43 FISLIPLMIFINQGLeSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 96 VLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiyyyDY 173
Cdd:MTH00066 123 LIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWEL----QQ 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 174 FFCSYDYSVICFMVM-FAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKIN-SILLLIG 251
Cdd:MTH00066 199 IFLLNDNSTLPLLGLiLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTAlTICLCLG 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 252 CLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGS 331
Cdd:MTH00066 279 ALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGG 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFNTLY 411
Cdd:MTH00066 359 LQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLS 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 412 NFSTGRDMYSGMFILLLF-TVFGGSLLSWLIFPT-PICVYLPLGLKLLTILVVLLGLYFGYLLSLScvnMSNMCNSSFFL 489
Cdd:MTH00066 439 PINENNPLIINPIKRLAWgSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKI---TSKTTPKTKMH 515
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2130626264 490 DFFSLMWFMPLLSTKLVSGITLTMGGKYCSFL-DYGWLEYYGAQGLYGFFIYFIK 543
Cdd:MTH00066 516 SFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLtDMTWYEKSGPKGLTNQQLPPIK 570
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
17-397 |
6.11e-87 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 281.66 E-value: 6.11e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAfMLYDVS---------YLIEWeiYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDR 87
Cdd:PRK06590 40 GLSALLSLV-VFFDFLlgggrafsqTLWTW--ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRR 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 88 FIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSISWML-NFGSW 165
Cdd:PRK06590 117 FFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 166 NYIYYYDYFFCSYDYS-----VICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfF 240
Cdd:PRK06590 197 NYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPL--F 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 241 SKINSILLLIGCL---TMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYI 317
Cdd:PRK06590 275 ELSPEALLFVAIVgavTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVI 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 318 HGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVcSFNCMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:PRK06590 355 HAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-549 |
4.22e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 277.24 E-value: 4.22e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 3 NNFYLSSLFFLVcgFISFLVSLAFMLYD----VSYLIEWeiYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDY 78
Cdd:MTH00208 55 SNFSISLLKTLA--FLSLINLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYY 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 79 MSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSIS 157
Cdd:MTH00208 131 MSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 158 W-MLNFGSWNYIYYYdyFFCSYDYSVICFM---VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:MTH00208 211 LsLINFNSWNLNEIL--SLNNSNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 234 FSPML-FFSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLC 312
Cdd:MTH00208 289 TSPLIsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 313 AGCYIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASY 392
Cdd:MTH00208 369 SGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVY 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 393 SFRLLYYSLISLFSFNTLYNFS-TGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVyLPLGLKLLTILVVLLGLYFGYL 471
Cdd:MTH00208 449 SFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFS 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 472 LSLScvNMSNMCNSSFFLdFFSLMWFMPLLSTKLVSGITLTMGGKYCS-FLDYGWLEYYGAQGLYGFFIY---------- 540
Cdd:MTH00208 528 FLLS--LSSNPINSNFFS-FLSNQWFFVNISHSIIISFSFFTSLFGSTrTLDRGWSENIGPQGIGNTSSTlsksyqltqt 604
|
570
....*....|
gi 2130626264 541 -FIKQYLGLF 549
Cdd:MTH00208 605 gYIKQYLLSS 614
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
17-398 |
1.46e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 275.31 E-value: 1.46e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSlAFMLYDVSYLIEWEIYTVN--SSVIVMGMLFDW------MSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRF 88
Cdd:TIGR01974 38 GLSAALS-AFVFVDFFLNGEGEAFTQSlfPWISVGGFQVDFglrldgLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 89 IVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWN 166
Cdd:TIGR01974 117 FAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 167 YIYYYDYFFCS--YDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS-KI 243
Cdd:TIGR01974 197 FQEVFALAPGAffSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 244 NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDN 323
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130626264 324 QDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
17-534 |
1.26e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 264.41 E-value: 1.26e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAFMLYDVSYLI-EWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLF 95
Cdd:MTH00108 45 IISLIPTMMFIHSGQEMIIsNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 96 VLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiyyYDY 173
Cdd:MTH00108 125 LITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDL---QQI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 174 FFCSYDYSVICFM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-INSILLLIG 251
Cdd:MTH00108 202 FMLNPNNSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKtIQTLTLCLG 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 252 CLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGS 331
Cdd:MTH00108 282 AITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFNTLY 411
Cdd:MTH00108 362 LFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLI 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 412 NFS-TGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVY-LPLGLKLLTILVVLLGLYFGYLLSLSCVNMSNMCNSSFFL 489
Cdd:MTH00108 442 TINeNNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMtMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFK 521
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2130626264 490 dFFSLMWFMPLLSTKLVSGITLTMGGKYCSFL-DYGWLEYYGAQGL 534
Cdd:MTH00108 522 -FSNMLGYFPTIMHRLPPYMNLTMSQKLASMLlDLIWLEKILPKTI 566
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
50-460 |
1.22e-75 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 251.53 E-value: 1.22e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 50 GMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IY 128
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 129 YQNLKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNY--IYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:MTH00020 155 LTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKINSILL-LIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:MTH00020 235 DAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 285 GILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDL 364
Cdd:MTH00020 315 VACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDL 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 365 ILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISlfsfNTLYNFSTGRDMYSG-------MFILLLFTVFGGSLL 437
Cdd:MTH00020 395 ILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLS----NTNLKKAVFFHLHEGdwnlllpLGILALGSIFVGYLA 470
|
410 420
....*....|....*....|....*
gi 2130626264 438 SWLIFPTPICVY--LPLGLKLLTIL 460
Cdd:MTH00020 471 KEMIWSFQITLPpiVPLSIKLLPVF 495
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-410 |
6.58e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 244.36 E-value: 6.58e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 53 FDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNL 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 133 KSVNAGLLTA-LSNRIGDVFILLSISWML-NFGSWNYiyyYDYFFCS--YDYSVICFMVMFAGMTKSAQIPFSAWLPAAM 208
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEI---QQIFALSkdFDLTLPLLGLILAATGKSAQFGLHPWLPSAM 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 209 AAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-INSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGIL 287
Cdd:MTH00137 243 EGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQtALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTI 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 288 GVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00137 323 GLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIE 402
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2130626264 368 VCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFNTL 410
Cdd:MTH00137 403 ALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPL 445
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
8-403 |
2.85e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 240.29 E-value: 2.85e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 8 SSLFFLVCGFISFLVSLaFMLYD------VSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSS 81
Cdd:MTH00210 28 AGILTSSCIVISAIVSC-CIFYEttlngsATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 82 DLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IYYQNLKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00210 107 DPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMIL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 161 N-FGSWNYIYYYDYFFCSYDYS---VICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:MTH00210 187 KeFGTLEFSTISSLLVTNINKEsltIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 237 MLFFSKINSILL-LIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00210 267 LFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 316 YIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFR 395
Cdd:MTH00210 347 VIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIR 426
|
....*...
gi 2130626264 396 LLYYSLIS 403
Cdd:MTH00210 427 LIYLTFIT 434
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
31-396 |
7.70e-66 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 226.83 E-value: 7.70e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 31 VSYLIEWEiyTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVS 110
Cdd:PRK07376 69 YERLFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 111 ILLGWDGLGLVSYCLV-IYYQNLKSVNAGLLTALSNRIGDVFILLSI---SWMLNfgswnyiyyydyffcSYDYSVI--- 183
Cdd:PRK07376 147 IYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWATG---------------SFDFDGIadr 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 184 ------------------CFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKINS 245
Cdd:PRK07376 212 lselvssgavsgwlalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPV--FEQFPA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 246 ILLLI---GCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLD 322
Cdd:PRK07376 290 VMTVIawtGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEE 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 323 --------NQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVcSFNCmNYFIYFLFFFSTGLTASYSF 394
Cdd:PRK07376 370 vvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGA-AFEA-NPALWFVGFLTAGMTAFYMF 447
|
..
gi 2130626264 395 RL 396
Cdd:PRK07376 448 RM 449
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
17-506 |
3.01e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 216.32 E-value: 3.01e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFV 96
Cdd:MTH00095 7 LILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 97 LSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLNFGswnyiyyYDYFFC 176
Cdd:MTH00095 87 GSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 177 SYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKINSILLLIGCLTMF 256
Cdd:MTH00095 160 SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSLTLNM 336
Cdd:MTH00095 240 FSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 337 PYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFNTLYNFStg 416
Cdd:MTH00095 320 MFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS-- 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 417 rdmYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVLLGLYFGYLLSLscVNMSNMCNSSFFLDFFSLMW 496
Cdd:MTH00095 398 ---VLMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFF--KLLFKELKYKFFVDYFAKNV 472
|
490
....*....|
gi 2130626264 497 FMPLLSTKLV 506
Cdd:MTH00095 473 IYKLKNLKFF 482
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
7-368 |
2.19e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 200.96 E-value: 2.19e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 7 LSSLFFLVCGFISFLVSLAFMLYDVsyLIEWEIYTVNSSVIVM---GMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDL 83
Cdd:MTH00032 31 LSTICMGSSTLIALFLAYEVLINDA--VVHIELYKWIESEIFIthiGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 84 SSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTAL-SNRIGDVFILLSISWM--- 159
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIvVNRVGDVGVILGMVLIykt 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 160 ---LNFGSWN------------YIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLV 224
Cdd:MTH00032 189 igsLDFLTFNggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 225 TAGVYLLIRFSPMlfFSKINSILLLI---GCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGV-GYPLLSFFHLL 300
Cdd:MTH00032 269 TAGVFLMIRSFPL--FEKAPLTLLIItifGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLV 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626264 301 THALFKSLLFLCAGCYIHGM-LDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEV 368
Cdd:MTH00032 347 NHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
54-367 |
1.20e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 181.78 E-value: 1.20e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIyyQNLK 133
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 SVNAGLL-TALSNRIGDVFILL------------SISWMLNFGSWNYIyyydyffcSYDYSVICFMVMFAGMTKSAQIPF 200
Cdd:PRK12650 156 GGEAGSIrTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWAEK--------PGLTTVVAVLIAVAAFTKSAQFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKINSILLLI-GCLTMFMSGIAANYEFDLKKIIALSTLSQ 279
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIvGMITALMGAVFAVQKTDLKKLTAYSTVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 280 LGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRGMGSLTLNMPYTSACLNVANLSLCG 352
Cdd:PRK12650 308 LGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLI-----GVVDHQagtrDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
330
....*....|....*
gi 2130626264 353 FPFLSGFYSKDLILE 367
Cdd:PRK12650 383 VPPLFGFVSKEGMLT 397
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-386 |
1.28e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 170.57 E-value: 1.28e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 105 SPNLVSILLGWDGLGLVSYCLVIYY-QNLKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIY----YYDYFFCSYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 180 YSVICFMVMFAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFS--KINSILLLIGCLTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2130626264 334 LNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvCSFNCMNYFIYFLFFFST 386
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA-AAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
33-395 |
1.62e-46 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 174.31 E-value: 1.62e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 33 YLIEWeiyTVNSSVIV-MGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSI 111
Cdd:CHL00025 71 YLWSW---TINNDFSLeFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 112 LLGWDGLGLVSYCLV-IYYQNLKSVNAGLLTALSNRIGDVFILLSIS---WMLnfGSWNYIYYYDYFFCSYDYS------ 181
Cdd:CHL00025 148 YIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GSFEFRDLFEIFNNLIYNNevnllf 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 182 -VICFMVMFAG-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLF--FSKINSILLLIGCLTMFM 257
Cdd:CHL00025 226 aTLCAFLLFLGpVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP-LFivIPYIMNLISLIGIITALL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 258 SGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGM--------LDNQDIRGM 329
Cdd:CHL00025 305 GATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLM 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130626264 330 GSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvcsfncmNYFIYFLFF-----FSTGLTASYSFR 395
Cdd:CHL00025 385 GGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN-------DSWLYSPIFaiiawSTAGLTAFYMFR 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
54-399 |
3.33e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 165.32 E-value: 3.33e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLK 133
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 SVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNY--IYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMA- 209
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPa 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 210 APTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:COG0651 235 APSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 286 ILGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:COG0651 314 GLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSK 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 2130626264 363 DLILEVcSFNCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:COG0651 393 WLLLQA-ALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-367 |
1.09e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 163.17 E-value: 1.09e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 50 GMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY- 128
Cdd:PRK12647 59 SFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFn 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 129 YQNLKSVNAGLLTALSNRIGDV-----FILL-------SISWMLNFGswnyiyyyDYFFCSYDYSVICFMVMFAGMTKSA 196
Cdd:PRK12647 139 HEREAARRAALQALLVTGGGGLallagLILLgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKI-NSILLLIGCLTMFMSGIAANYEFDLKKIIALS 275
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 276 TLSQLGLMMGILGVGYPLL---SFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRGMGSLTLNMPYTSACLNVANL 348
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVA-----GIIDHEtgtrDITKLGGLRRAMPITAAAALLAAL 365
|
330
....*....|....*....
gi 2130626264 349 SLCGFPFLSGFYSKDLILE 367
Cdd:PRK12647 366 SMAGLPPLFGFLAKELIYE 384
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
12-397 |
5.16e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 155.42 E-value: 5.16e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 12 FLVCGFISFLVSLAFMLYDVSYLIEWEIYTVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVL 91
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 92 VSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWmlnfgswnyiyyy 171
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL------------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 172 dYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKINSILLLIG 251
Cdd:MTH00063 149 -SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 252 CLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGS 331
Cdd:MTH00063 228 LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYS 307
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626264 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:MTH00063 308 SILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC 373
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-367 |
4.42e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.99 E-value: 4.42e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSS-DRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKDNlPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 132 LKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIY----YYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-INSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGI 286
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNmYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 287 LGVG--------------YPLLSF---FHLLTHALFKSLLFLCAGCYIHGMlDNQDIRGMGSLTLNMPYTSACLNVANLS 349
Cdd:PRK12646 317 VGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVMTIAALS 395
|
330
....*....|....*...
gi 2130626264 350 LCGFPFLSGFYSKDLILE 367
Cdd:PRK12646 396 MAGVPFLNGFLSKEMFLD 413
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
9-367 |
5.30e-38 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 149.61 E-value: 5.30e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 9 SLFFLVCGFISFLVSLAFMLYDVS-----YLIEWeiytVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDL 83
Cdd:TIGR00940 28 GWFVLAIPLVCFLYTLGLYPYTASggvlhYTIDW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 84 SSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYY-QNLKSVNAGLLTALSNRIGDVFILLSISWML-- 160
Cdd:TIGR00940 104 PLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhHRAHSRYGAQKSLTITVFGGLAMLGGLILLGki 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 161 --NFGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 238
Cdd:TIGR00940 184 tgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 239 FFSKI-NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSF----------------FHLLT 301
Cdd:TIGR00940 264 AGTEAwFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYHYqgddskiyalaavaavFHLIN 343
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626264 302 HALFKSLLFLCAGCYIHGMlDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:TIGR00940 344 HATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFA 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-398 |
1.15e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 148.80 E-value: 1.15e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLK 133
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 SVNAGLLTALS-------NRIGDVFILLSISwmlnfGSwnyiYYYDYFFCSYD-------YSVICFMVMFAGMTKSAQIP 199
Cdd:PRK12648 155 DARRGARMALTvtgagglALLAGVLLLGHIV-----GS----YDLDVVLAAGDlirahplYPPALVLILLGAFTKSAQFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML------FFskinsILLLIGCLTMFMSGIAANYEFDLKKIIA 273
Cdd:PRK12648 226 FHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagteewFW-----IVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 274 LSTLSQLGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRGMGSLTLNMPYTSACLNVA 346
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAA-----GIIDHEtgtrDMRRLSGLRRLMPITATLAMVA 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626264 347 NLSLCGFPFLSGFYSKDL----ILEVCSFNCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIH 431
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-367 |
1.79e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 145.45 E-value: 1.79e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 56 MSLIFMGfvfiISSMVLFYSSDYMSSDLS-SDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYY----- 129
Cdd:PRK12644 79 MSLLVLG----VGALVLLYCARYFDDDEPrLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYaeraa 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 130 ------QNLKSVNAGLLTALsnrIGdvFILLSISwmlnFGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAW 203
Cdd:PRK12644 155 srraalQALLVTTAGGLAML---VG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKINS---ILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQL 280
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPG--FADVPVwrpTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 281 GLMMGILGVGYP---LLSFFHLLTHALFKSLLFLcagcyIHGMLDNQ----DIRGMGSLTLNMPYTSACLNVANLSLCGF 353
Cdd:PRK12644 304 GFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFL-----VVGIIDHStgtrDIRKLSGLGRRQPVLAVVAALAAASMAGL 378
|
330
....*....|....
gi 2130626264 354 PFLSGFYSKDLILE 367
Cdd:PRK12644 379 PPLLGFVAKEAALE 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
6.97e-36 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 140.11 E-value: 6.97e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 45 SVIVMGMLFDWMSLIfMGFVFI-ISSMVLFYSSDYMS-------SDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWD 116
Cdd:PRK06525 65 DVALFGLVIDPVSVL-IGFVVVlLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 117 GLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMlnFGSWNYIYYYDYFFCSYDYSVICFM-VMFAGMTKS 195
Cdd:PRK06525 144 ITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL--FLQTGTFALSALSGLHGSLKYLVFLgILFAAWGKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 196 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspMLFFSKINSIL----LLIGCLTMFMSGIAANYEFDLKKI 271
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPHVIgyvgAVMAIVTLLYGFLMYLPQQDMKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 272 IALSTLSQLGLM-----MGILGVGYPLL-SFFHLLTHALFKSLLFLCAGC--YIHGMLDNQDIRGMGSLtlnMPYTSACL 343
Cdd:PRK06525 300 LAYSTITQLGYMffglsLAILGSRLALEgSIAYIFNHAFAKSLFFLVAGAlsYSCGTRLLPRLRGVLKK---LPLVGVGF 376
|
330 340
....*....|....*....|...
gi 2130626264 344 NVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06525 377 CVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
4.01e-33 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 135.05 E-value: 4.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSS-DRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY---- 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwyer 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 129 ----YQNLKSVNAGLLTALSNRIGdvFILLSISwmlnFGSWN---YIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFS 201
Cdd:PRK12645 157 easrYGAQKSMLITVFGGLSMLGG--FILLYIM----TGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 202 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKI-NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQL 280
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVwFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 281 GLMMGILGVGYPLLSF----------------FHLLTHALFKSLLFLCAGCYIHGMlDNQDIRGMGSLTLNMPYTSACLN 344
Cdd:PRK12645 311 GLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIAL 389
|
330 340
....*....|....*....|...
gi 2130626264 345 VANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12645 390 IGALSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
2.04e-30 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 126.48 E-value: 2.04e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQN-- 131
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHrp 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 132 ---LKSVNAGLLTA---LSNRIGdvFILL-------SISWMLNFGSW-NYIYYYDYFFcsydysVICFMVMFAGMTKSAQ 197
Cdd:PRK12649 159 esvYGATKSLLITAgggLFMFAG--FLLLhvitgtyDIATILQDSELiENIKGHPLFL------ITLILIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKINSILLLI---GCLTMFMSGIAANYEFDLKKIIAL 274
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPI--FSGTEAWFILVsgtGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 275 STLSQLGLMMGILGVG---YPLLSF----FHLLTHALFKSLLFLCAGCYIHGMLdNQDIRGMGSLTLNMPYTSACLNVAN 347
Cdd:PRK12649 309 STISQLAYLMTMYGYTtyhEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340
....*....|....*....|
gi 2130626264 348 LSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-399 |
7.92e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 119.98 E-value: 7.92e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSsdYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLK 133
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 SVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPT 212
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 213 PVSALVHSSTLVTAGVYLLIRFSPMLFFSKI------NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMmgI 286
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFTVFGGDFrfalglGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI--L 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 287 LGVGY-----PLLSFFHLLTHALFKSLLFLCAGC--YIHGMLDNQDIRGMGSltlNMPYTSACLNVANLSLCGFPFLSGF 359
Cdd:PRK08375 312 LGLALltplaLAAGLLHLLHHALMKGALFLAAGAieVTYGTRRLSELSGLGR---RMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2130626264 360 YSKDLILeVCSFNCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:PRK08375 389 VSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-367 |
7.55e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.13 E-value: 7.55e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 53 FDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVL---VSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY- 128
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLsalTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNd 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 129 YQNLKSVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNYiYYYDYFFCSYDYSVICFMVMFAgmTKSAQIPFSAWLPAA 207
Cdd:PRK08667 155 YQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFEL-SPLGASAGILSLVFLLLFLGFG--IKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 208 M-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKI--NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:PRK08667 232 HpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 285 GILGV-------GYPLLSF-------FHLLTHALFKSLLFLCAGCYIHGMLDnQDIRGMGSLTLNMPYTSACLNVANLSL 350
Cdd:PRK08667 311 MGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
330
....*....|....*..
gi 2130626264 351 CGFPFLSGFYSKDLILE 367
Cdd:PRK08667 390 AALPPFNGFASELLLYE 406
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-556 |
2.56e-23 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 97.24 E-value: 2.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 392 YSFRLLYYSLISLFSFNTLYNFS-TGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLGLKLLTILVVLLGLYFGY 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINeNNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 471 LLSLSCVNMSNMCNSSFFLDFFSLMWFMPLLSTKLVSGITLTMGGKYCSFLDYGWLEYYGAQGLYGFFIYFIKQYLGLFD 550
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
....*.
gi 2130626264 551 YNFKTY 556
Cdd:pfam06455 161 GLIKIY 166
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-388 |
3.57e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 103.81 E-value: 3.57e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 94 LFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSV-NAGLLTALSNRIGDVFILLSISWMlnfgsWNYIYYYD 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIrRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 173 Y----------FFCSydysvICFMVMFAGM-TKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS----- 235
Cdd:PRK06521 196 FaamraahlspFWAS-----LVFLLALFGFgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllg 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 236 -PMLFFSkinSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGV-------GYPLLS-------FFHLL 300
Cdd:PRK06521 270 aPGWWWG---VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 301 THALFKSLLFLCAGCYIHGMlDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKdlilevcsfncmnYFIYF 380
Cdd:PRK06521 347 NHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-------------WLLLQ 412
|
....*...
gi 2130626264 381 LFFFSTGL 388
Cdd:PRK06521 413 SLLSSPGL 420
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-441 |
4.38e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.87 E-value: 4.38e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNL- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 133 KSVNAGLLTALSNRIGDVFILLSISWML-NFGSWNYIYY-YDYFFCSYDYSVICFMVMFAGMT-KSAQIPFSAWLPAAM- 208
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 209 AAPTPVSALVHSSTLvtAGVYLLIRFSPMLFFSKINS-----ILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 284 MGILGVGYPLLS---------------FFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTLNMPYTSACLNVANL 348
Cdd:PRK08376 327 LLGLGVGLAALGdpamasygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 349 SLCGFPFLSGFYSKDLILEvcSFNCMNYFIYFLFFFSTGLTASYSFRLLYysliSLFSFNTLYNFSTGRD----MYSGMF 424
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFH----TAFFGPPSEKVMNVKEppkpMLVPML 479
|
410
....*....|....*..
gi 2130626264 425 ILLLFTVFGGsLLSWLI 441
Cdd:PRK08376 480 ILAIAIIGMG-LFPWQI 495
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-367 |
1.13e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 101.59 E-value: 1.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLK 133
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 -SVNAGLLTALSNRIGDVFILLSISWM------LNFGSWNYIYYYDYF------FCSYDYSVICFMVMF--AGMTKSAQI 198
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFpltgglAGNPPLALGVALALAlwAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 199 PFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKIN---------SILLLIGCLTMFMSGIAANYEFDL 268
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSlidfraalsPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 269 KKIIALSTLSQLG-LMMGI-LGVGYPLLSF-FHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTLNMPYTSACLNV 345
Cdd:PRK12667 320 KRLLAYSTISHMGyIFMGIgIGTQLGLAAAlFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340
....*....|....*....|..
gi 2130626264 346 ANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFN 420
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
2.74e-22 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 100.54 E-value: 2.74e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 56 MSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKsv 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 136 nAGLLTA----LSNRIGDVFILLSIS-WMLNFGSWNYIYYYDYFF---CSYDYSVICFMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAaqgASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 208 MAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFS-KINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGI 286
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQApPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 2130626264 287 LGVGYPLLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
57-361 |
1.04e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 96.13 E-value: 1.04e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 57 SLIFMGFVFIISSMVLF---YSSDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLK 133
Cdd:PRK07390 88 SPVTLGALELITGLSLLaqiYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQP 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 134 SVNAGLLTA-LSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFCSYDYSVICFMV---MFAG-MTKSAQIPFSAWLPAA 207
Cdd:PRK07390 168 LVVTAARDAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLglaLIAGpTGKCAQFPLHLWLDEA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 208 MAAPTPVSALvHSSTLVTAGVYLLIRFSPMLFFSKI-NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGI 286
Cdd:PRK07390 248 MEGPNPASIL-RNSVVVATGAWVLIKLQPVLALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA 326
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130626264 287 LGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLdNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYS 361
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTI-TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-408 |
2.31e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 94.50 E-value: 2.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 49 MGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDL--SSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV 126
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 127 IYYQNLKSVNAGLlTALSNRIGDVFILLSISWMLNFGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPA 206
Cdd:PRK06589 157 GHTRNNISLSGGY-KYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF-------FSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQ 279
Cdd:PRK06589 236 AMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqrIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 280 LGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFL 356
Cdd:PRK06589 316 LSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2130626264 357 SGFYSKDLILEVCSFN---CMNYFIYFLFFFSTGLTASYSFRLLYYSLISLFSFN 408
Cdd:PRK06589 395 SGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSEN 449
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-367 |
9.52e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 92.32 E-value: 9.52e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 193 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFfsKINSILLLIGCLTMFMSGIAANYEFDLKKII 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP--GLDLIVRIFGVGTALLGVLFALLEKDLKRML 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 273 ALSTLSQLGLMmgilgVGYPLLSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRGMGSLTLNMPYTSACLNVAnlslcG 352
Cdd:PRK07234 274 AFSTISQLGFI-----LAAPLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----G 342
|
170
....*....|....*
gi 2130626264 353 FPFLSGFYSKDLILE 367
Cdd:PRK07234 343 FPLLAGFVSKVLTLK 357
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
186-398 |
9.88e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 92.52 E-value: 9.88e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 186 MVMFAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKINSILLLIGCLTMFMSGI 260
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQnangWSSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 261 AANYEFDLKKIIALSTLSQLGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRGMGSLTLNMP 337
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG-YVGITLGGTEIEKFEGLGKRMP 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130626264 338 YTSACLNVANLSLCGFPFLSGFYSKDLILeVCSFNCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-398 |
2.28e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 91.98 E-value: 2.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 10 LFFLVCGFISFLVS-------LAFMLYDVSYLIEW---------EIYTVNSSVIVMGMLFDWMSLIFMGFVFI-ISSMVL 72
Cdd:PRK08668 8 LTPLIGSVLAYLLKkinekigVIGNALPLLFLIKLyftlkvgtgEKLTLFFGGFKLTFTLTHLSWFFAMISLLvIFSVAF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 73 FYSSDYMSSDLSSDRFIVLVSLFVLSMMFliiSPNLVSILLGWDGLGLVSYcLVIYYQNLKSVNAGLLTALSNRIGDVFI 152
Cdd:PRK08668 88 FMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAM 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 153 LLSISWMLN-FGSWNY--IYYYDYFFCSYDYSVICFMVMFA-GMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAG 227
Cdd:PRK08668 164 LYAIFLIYAkTGTFDFadISQGLINDTSTGFALIVFLFLLAfGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 228 VYLLIRFSPMLFFSKI-------------NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLL 294
Cdd:PRK08668 243 AYGFLLVLYVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 295 ---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSF 371
Cdd:PRK08668 323 fagGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALIS 401
|
410 420
....*....|....*....|....*..
gi 2130626264 372 NCMnYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK08668 402 KGM-PITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
17-362 |
1.01e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 79.78 E-value: 1.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 17 FISFLVSLAFMLYDVSYlieweiytvNSSVIVMGML-FDWMSLIFMGFVFIISSMVLFYSSDYMS-SDLSSDRFIVLVSL 94
Cdd:COG1007 40 LLGLLLALALLLLALGG---------GTGTAFGGMFvVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLF 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 95 FVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IYYQNLKSVNAGL----LTALSNrigdVFILLSISWMLNF-GSWNYI 168
Cdd:COG1007 111 ATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 169 YYYDYFFCSYDYS---VICFMVMFAGMT-KSAQIPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLFFSK 242
Cdd:COG1007 187 GIAAALAAGGANSpllLLGLVLVLAGLAfKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 243 INS---ILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLG-LMMGILGVGYPLLS--FFHLLTHALFKSLLFLCAGCY 316
Cdd:COG1007 265 AADwqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGyLLLGLAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLL 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2130626264 317 IHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:COG1007 345 SRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-366 |
4.09e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 78.40 E-value: 4.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 108 LVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISW-MLNFGSWNYiyyyDYFFcsyDYSVICFM 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAF----GAIA---GLGGTAAW 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 187 VMFAG-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlffskiNSILLLIGCLTMFMSGIAANYE 265
Cdd:PRK12668 188 LILIGfGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG------TELLIYIGAAMAVYGVFFALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 266 FDLKKIIALSTLSQLGLMMGILGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTLNMPYTSAC 342
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALF 340
|
250 260
....*....|....*....|....
gi 2130626264 343 LNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
180-314 |
3.45e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.07 E-value: 3.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 180 YSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFSKINSILLLIGCLTMFMSG 259
Cdd:PRK08601 203 KTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGT 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2130626264 260 IAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 282 GISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
147-397 |
4.18e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 4.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 147 IGDVFILLSISWMLNFG---SWNYIYYYDYFFcSYDYSVICFMVMFAG-MTKSAQIPFSAWLP-AAMAAPTPVSALvHSS 221
Cdd:COG1008 172 AGSLLMLVAILALYFLAgalTFDIAELAAAPL-PLTAQLLLFLAFFIAfAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAG 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 222 TLVTAGVYLLIRFSPMLF---FSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMM---------GILGv 289
Cdd:COG1008 250 VLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLlgifalnplGLQG- 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 290 gypllSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILeVC 369
Cdd:COG1008 329 -----AVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL-LG 401
|
250 260
....*....|....*....|....*....
gi 2130626264 370 SFNcmNYFIYFLF-FFSTGLTASYSFRLL 397
Cdd:COG1008 402 AFQ--VNPWLAILaALGLILTAAYLLWMY 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
182-366 |
6.64e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.13 E-value: 6.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 182 VICFMVMFAGmtKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFF---SKINSILLLIGCLTMFMS 258
Cdd:PRK12663 210 ALLFLLAFGM--KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 259 GIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIhGMLDNQDIRGMGSLTLN 335
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|.
gi 2130626264 336 MPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-405 |
4.12e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.44 E-value: 4.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 183 ICFMVMFAgmTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR-FSpmLFFSK----INSILLLIGCLTMF 256
Cdd:PRK07691 213 ILFLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFT--LFFSHdtsfTHYLILILALLTII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLT 333
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLI 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2130626264 334 LNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvCSFNCMNYFIYFLFFFSTGLTasysfrllYYSLISLF 405
Cdd:PRK07691 367 KRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLV--------LYSVIKIF 429
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
6.22e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.03 E-value: 6.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 193 TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKIN----SILLLIGCLTMFMSGIAANYEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 268 LKKIIALSTLSQLGLMMGILGVGYPLLSF---FHLLTHALFKSLLFLCAG--CYIHGMLDNQDIRGMgslTLNMPYTSAC 342
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGnvLQKYGTRDINVIRGL---LKVSPLTGWG 381
|
170 180
....*....|....*....|....
gi 2130626264 343 LNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 382 LMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
183-366 |
6.33e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 6.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 183 ICFMVMFAGM-TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML----FFSKINSILLLIGCLTMF 256
Cdd:PRK08676 207 ASFLFIFIGFlAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGYPLLSF---FHLLTHALFKSLLFLCAGCyIHGMLDNQDIRGMGSLT 333
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVF 364
|
170 180 190
....*....|....*....|....*....|...
gi 2130626264 334 LNMPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
3.32e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.00 E-value: 3.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 198 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYllirfsPMLFFSKINS--------ILLLIGCLTMFMSGIAANYEFDL 268
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLL------GILTLSLLGGnaplwwgvALLVLGMITAFVGGLYALMEHNI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 269 KKIIALSTLSQLGLMMGILGVGYPLLS--------------FFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRGMGSLTL 334
Cdd:PRK08042 270 QRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGK 348
|
170 180
....*....|....*....|....*
gi 2130626264 335 NMPYTSACLNVANLSLCGFPFLSGF 359
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
39-362 |
8.48e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 64.46 E-value: 8.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 39 IYTVNSSVIVMGML-FDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDrFIVLVSLFVLSMMFLIISPNLVSILLGWDG 117
Cdd:PRK05777 56 LGAAGGGTAFGGMLvVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLEL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 118 LGLVSYCLVIY-YQNLKSVNAGL----LTALSNrigdVFILLSISWMLNF-GSWNYIYYYDYFFCSYDYS---VICFMVM 188
Cdd:PRK05777 135 LSLPLYALAALrRDRRRSLEAAIkyfvLGALAS----GFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSlllLFGLVFL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 189 FAGMT-KSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLFFS---KINSILLLIGCLTMFMSGIAAN 263
Cdd:PRK05777 211 LVGLAfKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGlseDWQQVLAIIAIASMLVGNLAAL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 264 YEFDLKKIIALSTLSQLG-LMMGILGVGYPLLS--FFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRGMGSLTLNMPYTS 340
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGyLLVGLAAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLA 369
|
330 340
....*....|....*....|..
gi 2130626264 341 ACLNVANLSLCGFPFLSGFYSK 362
Cdd:PRK05777 370 AVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-367 |
7.31e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 61.52 E-value: 7.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 186 MVMFAGMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLFFS-KINSILLLIGCLTMFMSGIAAN 263
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGgGLDTLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 264 YEFDLKKIIALSTLSQLGLMMGILGVGYPL-LS--FFHLLTHALFKSLLFLCAgcyihGMLDNQD----IRGMGSLTLNM 336
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVV-----GLIERQAgsssLRRLGGLAKAS 367
|
170 180 190
....*....|....*....|....*....|.
gi 2130626264 337 PYTSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-368 |
6.16e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 6.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 52 LFDWMSLIFMGFVFIISSMVLFYSSdymSSDLSSDRFIVLVSLFVLS---MMFLIISPNLVSILLGWDGLGLVSYCLVIY 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPN---RKEISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 129 YQNLKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFCSYDYSVI---CFMVMFAGMTKSAQIPFSAWL 204
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIR-----FSPMLFFSKI--NSILLLIGCLTMFMSGIAANYEFDLKKIIALSTL 277
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLpfNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 278 SQLGLMMGILGVG--YPLLS-FFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFP 354
Cdd:PRK12662 313 SHIGYIILAVSLNtyYGLAAaVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMP 391
|
330
....*....|....
gi 2130626264 355 FLSGFYSKDLILEV 368
Cdd:PRK12662 392 PTSGFVAKWYILDA 405
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-449 |
1.85e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 57.05 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 89 IVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNyi 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT-- 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 169 yyydyffcsyDYSVICFMVMFagMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLFFSKINSILL 248
Cdd:PRK12664 144 ----------GYCKLLFMLGL--LINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 249 LIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMM------GILGVGYPLLsFFHLLTHALFKSLLFLCAGCYIHGMlD 322
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIiaigfsGSSGVAIGIL-ILQIVLSVVYQTLLFMVADSVINRT-R 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 323 NQDIRGMGSLtLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFNCMNYFIYFLFF--FSTGLTASYSFRLLYYS 400
Cdd:PRK12664 284 KFNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYA 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2130626264 401 LISLFSFNTLYNFSTGRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVY 449
Cdd:PRK12664 363 FISKSKSKPEAEKVYIGSKLSMIILVLICVVLGMFNSYLLFYNLPSFVY 411
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
52-367 |
2.09e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.96 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 52 LFDWMSLIFMGFVFIISSMVLFyssDYMSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK06277 69 LFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 132 LKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFCSYDYSVICF---MVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK06277 146 EEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIYGgllLLIFGLLYGSGLPPFHTIKSDI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 208 MAAPTP-VSALVHSS---TLVTAGVYLLIRFSPMLFFSKINSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK06277 226 YAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 284 MGILGVGYPL---LSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFY 360
Cdd:PRK06277 306 AAGLALGTPLgivAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQ 384
|
....*..
gi 2130626264 361 SKDLILE 367
Cdd:PRK06277 385 SKLMLAQ 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-362 |
2.35e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 56.55 E-value: 2.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 54 DWMSLIFMGFVFIISSMVLFYSSDYM-SSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 132 LKSVNAGLLTALSNRIGDVFILLSISWM--LNFGSWNYIYYYDYFFCSYDYSVICFMVMFAGMT-----KSAQIPFSAWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKIN---SILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 281 G-LMMGILgVGYPLLSFFHLLTHALFKSLLFLCA-GCYI-HGMLDNQD-IRGMGSLTLNMPYTSACLNVANLSLCGFPFL 356
Cdd:CHL00049 317 GyVIIGII-VGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
....*.
gi 2130626264 357 SGFYSK 362
Cdd:CHL00049 396 AGFFGK 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
185-397 |
3.95e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 55.72 E-value: 3.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 185 FMVMFAgmTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLF--FSKINSILLLIGCL-TMFMSGI 260
Cdd:TIGR01972 209 FFIAFA--VKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNLPLFpdASLYFAPVLAALGViAIIYGAL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 261 AANYEFDLKKIIALSTLSQLGLMM---------GILGvgypllSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRGMGS 331
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFVLlgifsfnelGISG------AVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGG 358
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626264 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILeVCSFNcMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:TIGR01972 359 LANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL-LGSFK-VNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-366 |
9.01e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.82 E-value: 9.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 143 LSNRIGDVFILLSISWM-----LNFGSWNYIYYYDYFFcSYDYSV---ICFMVMFAgmTKSAQIPFSAWLPAAMA-APTP 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPL-PPGVQYwlfLAFFIAFA--VKMPMFPLHTWLPDAHVqAPTA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 214 VSALvHSSTLVTAGVYLLIRFSPMLF--FSKINSILLLIGCLTM-FMSGIAANYEFDLKKIIALSTLSQLG-LMMGI--- 286
Cdd:PRK05846 245 GSVL-LAGILLKMGAYGLLRFSLPLFpdASHEFAPIIITLGVIAiIYGALVALAQTDIKKLIAYSSISHMGfVTLGIfag 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 287 --LGVGYpllSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDL 364
Cdd:PRK05846 324 nqLGIQG---AIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFL 399
|
..
gi 2130626264 365 IL 366
Cdd:PRK05846 400 IL 401
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-314 |
1.06e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.80 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 60 FMGFVFIISSMVLFYSSDY-MSSDLSSDRFIVLVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNLKSVNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 139 LLTalsnrigdvFILLSISWMLNFGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPF--SAWLPAAMA-APTPVS 215
Cdd:PRK06459 125 FMA---------FGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 216 AlVHSSTLVTAGVYLLIRFSPMLFFSKINSI---LLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGV--- 289
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 2130626264 290 ---------GYPLLS-FFHLLTHALFKSLLFLCAG 314
Cdd:PRK06459 275 tkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
198-397 |
6.95e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 48.94 E-value: 6.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF---FSKINSILLLIGCLTMFMSGIAANYEFDLKKIIAL 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqtWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 275 STLSQLGLMMGILGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIH--GMLDNQDIRGMGSLTLNMPYTSACLNVANLS 349
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIVERkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMA 381
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2130626264 350 LCGFPFLSGFYSKDLILEvCSFNCMNyFIYFLFFFSTGLTASYSFRLL 397
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQ-GSFSTFP-IPTLLCIVASGLTAVYFVILL 427
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
1.87e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.33 E-value: 1.87e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2130626264 41 TVNSSVIVMGMLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLSSDRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
198-392 |
4.24e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.15 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 198 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKINSI---LLLIGCLTMFMSGIAANYEFDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 274 LSTLSQLGLMMGILGVGYPL---LSFFHLLTHALFKSLLFLCAGCYIH--GMLDNQDIRGMGSLTLNMPYTSACLNVANL 348
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVGVVYKktGSRDVDVLRGLLNPERGLPITGSLMILGVM 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2130626264 349 SLCGFPFLSGFYSKDLILEvCSFNCMNyFIYFLFFFSTGLTASY 392
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLVFR-GSFPIFP-VQTLLCMIGTGLTAVY 422
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
162-437 |
5.88e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 42.26 E-value: 5.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 162 FGSWNYIYYYDYFFCSYDYSVICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFfs 241
Cdd:MTH00200 73 GGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 242 kiNSILLLIGCLTMFMSGIAANYEFDLKKIIALSTLSQLGLMMGILGVGyPLLSFFHLLTHALFKSLLFLcagcyIHGML 321
Cdd:MTH00200 151 --SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 322 DNQDIRGMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILevcsfncMNYFIYFLFFFSTGLTASYSFRLLYYSL 401
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSLLSLFFYLR 295
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2130626264 402 IS-----LFSFNTLYNFSTGRDMYSGMFILLLFTVFGGSLL 437
Cdd:MTH00200 296 LSyltllTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGL 336
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
1.05e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 41.35 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 184 CFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSkinsILLLIGCLTMFMSGIAAN 263
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 264 YEFDLKKIIALSTLSQLGLMMGILGVGyPLLSFFHLLTHALFKSLLFLcagcyIHGMLDNQDIRGMGSLTLNMPYTSACL 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 2130626264 344 NVANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
194-453 |
9.98e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.51 E-value: 9.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 194 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK---INSILLLIGCLTMFMSGIAANYEFDLKK 270
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAseyFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 271 IIALSTLSQLGL---------MMGILGvgypllSFFHLLTHALFKSLLFLcAGCYIHGMLDNQDIRGMGSLTLNMPYTSA 341
Cdd:MTH00204 302 LIAYSSVAHMGLvplglfthtIEGLVA------AVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVI 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626264 342 CLNVANLSLCGFP----FLSGFYSkdlILEVCSFncmNYFIYFLFFFSTGLTASYSfrLLYYSLISL--FSFNTLYNFST 415
Cdd:MTH00204 375 IMLVLSLANMGFPlscnFVGEFFS---LLAAFEY---SLGLGVLVTSGMVWSAAYS--LYLYNRISFggGSNYLLFSRDL 446
|
250 260 270
....*....|....*....|....*....|....*...
gi 2130626264 416 GRDMYSGMFILLLFTVFGGSLLSWLIFPTPICVYLPLG 453
Cdd:MTH00204 447 NRRELLAILPLIIAIFLLGIVPFIIIDLVKNSLVFSPG 484
|
|
| |
