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Conserved domains on  [gi|21110672|gb|AAM39071|]
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ring canal kelch-like protein [Xanthomonas citri pv. citri str. 306]

Protein Classification

Kelch repeat-containing protein( domain architecture ID 11459646)

Kelch repeat-containing protein, member of a superfamily of proteins with diverse functions

CATH:  2.120.10.80
Gene Ontology:  GO:0005515
SCOP:  3000448

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
39-330 1.66e-63

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 203.08  E-value: 1.66e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  39 QWRSVQAqgEPHARHENSMAAIGERLYVLGG----RGERPLDIFDTRTRRWSRGSAPPL-AVNHAQAAVWAGKLYLVGGF 113
Cdd:COG3055   2 TWSSLPD--LPTPRSEAAAALLDGKVYVAGGlsggSASNSFEVYDPATNTWSELAPLPGpPRHHAAAVAQDGKLYVFGGF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 114 TGDYPNETALTHLLIYDPATDRWQVGAEIPadRRRGSAGTVAHDGVLYLVGGNtrgHNSGYVPWLDAFDTRTQRWTRLPD 193
Cdd:COG3055  80 TGANPSSTPLNDVYVYDPATNTWTKLAPMP--TPRGGATALLLDGKIYVVGGW---DDGGNVAWVEVYDPATGTWTQLAP 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 194 APHARDHFHAVVL-DGKLYAGGGRRSSHDTGdtlsqtipqldvydlrqaTWSVAdATLPTPRAGAAAIAHHGRVMLLGGE 272
Cdd:COG3055 155 LPTPRDHLAAAVLpDGKILVIGGRNGSGFSN------------------TWTTL-APLPTARAGHAAAVLGGKILVFGGE 215
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 21110672 273 STAqvagHAEVESYDPATARWVTGPALPRGRHGTQAAQVGGDLYIAAGSGNRGGGPEL 330
Cdd:COG3055 216 SGF----SDEVEAYDPATNTWTALGELPTPRHGHAAVLTDGKVYVIGGETKPGVRTPL 269
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
39-330 1.66e-63

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 203.08  E-value: 1.66e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  39 QWRSVQAqgEPHARHENSMAAIGERLYVLGG----RGERPLDIFDTRTRRWSRGSAPPL-AVNHAQAAVWAGKLYLVGGF 113
Cdd:COG3055   2 TWSSLPD--LPTPRSEAAAALLDGKVYVAGGlsggSASNSFEVYDPATNTWSELAPLPGpPRHHAAAVAQDGKLYVFGGF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 114 TGDYPNETALTHLLIYDPATDRWQVGAEIPadRRRGSAGTVAHDGVLYLVGGNtrgHNSGYVPWLDAFDTRTQRWTRLPD 193
Cdd:COG3055  80 TGANPSSTPLNDVYVYDPATNTWTKLAPMP--TPRGGATALLLDGKIYVVGGW---DDGGNVAWVEVYDPATGTWTQLAP 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 194 APHARDHFHAVVL-DGKLYAGGGRRSSHDTGdtlsqtipqldvydlrqaTWSVAdATLPTPRAGAAAIAHHGRVMLLGGE 272
Cdd:COG3055 155 LPTPRDHLAAAVLpDGKILVIGGRNGSGFSN------------------TWTTL-APLPTARAGHAAAVLGGKILVFGGE 215
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 21110672 273 STAqvagHAEVESYDPATARWVTGPALPRGRHGTQAAQVGGDLYIAAGSGNRGGGPEL 330
Cdd:COG3055 216 SGF----SDEVEAYDPATNTWTALGELPTPRHGHAAVLTDGKVYVIGGETKPGVRTPL 269
PHA03098 PHA03098
kelch-like protein; Provisional
148-320 6.91e-12

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 66.33  E-value: 6.91e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  148 RGSAGTVAHDGVLYLVGG-NTRGHNSGYVpwlDAFDTRTQRWTRLPDAPHARDHFHAVVLDGKLYAGGGRRSSHDTGDTL 226
Cdd:PHA03098 285 VYCFGSVVLNNVIYFIGGmNKNNLSVNSV---VSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVE 361
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  227 SqtipqldvYDLRQATWSVAdATLPTPRAGAAAIAHHGRVMLLGGESTAQVAGHAeVESYDPATARWVTGPALPRGRHGT 306
Cdd:PHA03098 362 S--------WKPGESKWREE-PPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKT-VECFSLNTNKWSKGSPLPISHYGG 431
                        170
                 ....*....|....
gi 21110672  307 QAAQVGGDLYIAAG 320
Cdd:PHA03098 432 CAIYHDGKIYVIGG 445
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
147-193 1.83e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 41.44  E-value: 1.83e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 21110672   147 RRGSAGTVAHDGVLYLVGG--NTRGHNSGYVpwldaFDTRTQRWTRLPD 193
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGfdGNQSLNSVEV-----YDPETNTWSKLPS 44
Kelch smart00612
Kelch domain;
159-208 1.06e-04

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 39.08  E-value: 1.06e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 21110672    159 VLYLVGGNTRGHNSGYVpwlDAFDTRTQRWTRLPDAPHARDHFHAVVLDG 208
Cdd:smart00612   1 KIYVVGGFDGGQRLKSV---EVYDPETNKWTPLPSMPTPRSGHGVAVING 47
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
39-330 1.66e-63

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 203.08  E-value: 1.66e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  39 QWRSVQAqgEPHARHENSMAAIGERLYVLGG----RGERPLDIFDTRTRRWSRGSAPPL-AVNHAQAAVWAGKLYLVGGF 113
Cdd:COG3055   2 TWSSLPD--LPTPRSEAAAALLDGKVYVAGGlsggSASNSFEVYDPATNTWSELAPLPGpPRHHAAAVAQDGKLYVFGGF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 114 TGDYPNETALTHLLIYDPATDRWQVGAEIPadRRRGSAGTVAHDGVLYLVGGNtrgHNSGYVPWLDAFDTRTQRWTRLPD 193
Cdd:COG3055  80 TGANPSSTPLNDVYVYDPATNTWTKLAPMP--TPRGGATALLLDGKIYVVGGW---DDGGNVAWVEVYDPATGTWTQLAP 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 194 APHARDHFHAVVL-DGKLYAGGGRRSSHDTGdtlsqtipqldvydlrqaTWSVAdATLPTPRAGAAAIAHHGRVMLLGGE 272
Cdd:COG3055 155 LPTPRDHLAAAVLpDGKILVIGGRNGSGFSN------------------TWTTL-APLPTARAGHAAAVLGGKILVFGGE 215
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 21110672 273 STAqvagHAEVESYDPATARWVTGPALPRGRHGTQAAQVGGDLYIAAGSGNRGGGPEL 330
Cdd:COG3055 216 SGF----SDEVEAYDPATNTWTALGELPTPRHGHAAVLTDGKVYVIGGETKPGVRTPL 269
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
188-333 3.83e-16

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 77.12  E-value: 3.83e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672 188 WTRLPDAPHARDHFHAVVLDGKLYAGGGRRSSHDTGDtlsqtipqLDVYDLRQATWSVAdATLPT-PRAGAAAIAHHGRV 266
Cdd:COG3055   3 WSSLPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNS--------FEVYDPATNTWSEL-APLPGpPRHHAAAVAQDGKL 73
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21110672 267 MLLGG--ESTAQVAGHAEVESYDPATARWVTGPALPRGRHGTQAAQVGGDLYIAAGSGNRGGGPELQDL 333
Cdd:COG3055  74 YVFGGftGANPSSTPLNDVYVYDPATNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVY 142
PHA03098 PHA03098
kelch-like protein; Provisional
148-320 6.91e-12

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 66.33  E-value: 6.91e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  148 RGSAGTVAHDGVLYLVGG-NTRGHNSGYVpwlDAFDTRTQRWTRLPDAPHARDHFHAVVLDGKLYAGGGRRSSHDTGDTL 226
Cdd:PHA03098 285 VYCFGSVVLNNVIYFIGGmNKNNLSVNSV---VSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVE 361
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  227 SqtipqldvYDLRQATWSVAdATLPTPRAGAAAIAHHGRVMLLGGESTAQVAGHAeVESYDPATARWVTGPALPRGRHGT 306
Cdd:PHA03098 362 S--------WKPGESKWREE-PPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKT-VECFSLNTNKWSKGSPLPISHYGG 431
                        170
                 ....*....|....
gi 21110672  307 QAAQVGGDLYIAAG 320
Cdd:PHA03098 432 CAIYHDGKIYVIGG 445
PHA03098 PHA03098
kelch-like protein; Provisional
50-244 8.89e-11

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 62.86  E-value: 8.89e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   50 HARHENSMAAIGERLYVLGGRGErplDIFDTRTRRWSRGS-----APPL--AVNHAQAAVWAGKLYLVGGFtgdYPNETA 122
Cdd:PHA03098 331 YPRKNPGVTVFNNRIYVIGGIYN---SISLNTVESWKPGEskwreEPPLifPRYNPCVVNVNNLIYVIGGI---SKNDEL 404
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  123 LTHLLIYDPATDRWQVGAEIPADRRRGSAgtVAHDGVLYLVGGNTRGHNSGYVPWLDAFDTRTQRWTRLPDAPHARDHFH 202
Cdd:PHA03098 405 LKTVECFSLNTNKWSKGSPLPISHYGGCA--IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINAS 482
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 21110672  203 AVVLDGKLYAGGGrrsshDTGDTLSQTIpqlDVYDLRQATWS 244
Cdd:PHA03098 483 LCIFNNKIYVVGG-----DKYEYYINEI---EVYDDKTNTWT 516
PRK14131 PRK14131
N-acetylneuraminate epimerase;
51-281 1.18e-10

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 61.95  E-value: 1.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   51 ARHENSMAAIGERLYVLGGRGERPLD----------IFDTRTRRWSRGS--APPLAVNHAQAAVWAGKLYLVGG-----F 113
Cdd:PRK14131  74 PREQAVAAFIDGKLYVFGGIGKTNSEgspqvfddvyKYDPKTNSWQKLDtrSPVGLAGHVAVSLHNGKAYITGGvnkniF 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  114 TG--------------------DYPNETAL-----THLLIYDPATDRWQVGAEIPADRRRGSAgTVAHDGVLYLVGGNTR 168
Cdd:PRK14131 154 DGyfedlaaagkdktpkdkindAYFDKKPEdyffnKEVLSYDPSTNQWKNAGESPFLGTAGSA-VVIKGNKLWLINGEIK 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  169 -GHNSGYVpWLDAFDTRTQRWTRLPDAPHARDH---------FHAVVLDGKLYAGG----GRRSSHDTG-----DTLSQT 229
Cdd:PRK14131 233 pGLRTDAV-KQGKFTGNNLKWQKLPDLPPAPGGssqegvagaFAGYSNGVLLVAGGanfpGARENYQNGklyahEGLKKS 311
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 21110672  230 IPQlDVYDLRQATWSVAdATLPTPRAGAAAIAHHGRVMLLGGESTAQVAGHA 281
Cdd:PRK14131 312 WSD-EIYALVNGKWQKV-GELPQGLAYGVSVSWNNGVLLIGGETAGGKAVSD 361
PLN02153 PLN02153
epithiospecifier protein
35-313 1.10e-08

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 55.76  E-value: 1.10e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   35 TSQWQWRSVQAQGE--PHARHENSMAAIGERLYVLGGRG------ERPLDIFDTRTRRWS----RGSAPPLAVNHAQAAV 102
Cdd:PLN02153   4 TLQGGWIKVEQKGGkgPGPRCSHGIAVVGDKLYSFGGELkpnehiDKDLYVFDFNTHTWSiapaNGDVPRISCLGVRMVA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  103 WAGKLYLVGGftgdYPNETALTHLLIYDPATDRWQVGAEIpaDRRRGSAGTVAH-----DGVLYLVGGNTRG---HNSGY 174
Cdd:PLN02153  84 VGTKLYIFGG----RDEKREFSDFYSYDTVKNEWTFLTKL--DEEGGPEARTFHsmasdENHVYVFGGVSKGglmKTPER 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  175 VPWLDAFDTRTQRWTRLPDAP---HARDHFHAVVLDGKLYAGGGRRSSHDTGDTLSQTIPQLDVYDLRQATWSVADAT-- 249
Cdd:PLN02153 158 FRTIEAYNIADGKWVQLPDPGenfEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTga 237
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21110672  250 LPTPRAGAAAIAHHGRVMLLGGESTAQVAGH-------AEVESYDPATARW-----VTGPALPRGRHGTQAAQVGG 313
Cdd:PLN02153 238 KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHlgpgtlsNEGYALDTETLVWeklgeCGEPAMPRGWTAYTTATVYG 313
PLN02193 PLN02193
nitrile-specifier protein
22-226 2.30e-07

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 52.27  E-value: 2.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   22 ASGQANGVAPAGSTS-QWQWRSVQAQGePHARHENSMAAIGERLYVLGGRGER----PLDIFDTRTRRWSRGSAPPLAVN 96
Cdd:PLN02193 239 ASRQYNGFYSFDTTTnEWKLLTPVEEG-PTPRSFHSMAADEENVYVFGGVSATarlkTLDSYNIVDKKWFHCSTPGDSFS 317
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   97 HAQAA---VWAGKLYLVGGFTGdypneTALTHLLIYDPATDRW---QVGAEIPADRRRGSAGTVAHDGVLYlvGG----N 166
Cdd:PLN02193 318 IRGGAgleVVQGKVWVVYGFNG-----CEVDDVHYYDPVQDKWtqvETFGVRPSERSVFASAAVGKHIVIF--GGeiamD 390
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 21110672  167 TRGHnSGYVPWLD---AFDTRTQRWTRL------PDAPHARDHFHAV--VLDGK--LYAGGGRRSSHDTGDTL 226
Cdd:PLN02193 391 PLAH-VGPGQLTDgtfALDTETLQWERLdkfgeeEETPSSRGWTASTtgTIDGKkgLVMHGGKAPTNDRFDDL 462
PLN02193 PLN02193
nitrile-specifier protein
39-320 4.61e-06

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 48.03  E-value: 4.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   39 QWRSVQAQGE-PHARHENSMAAIGERLYVLGGR--GERPLD----IFDTRTRRWSRGSApplavnhaqaavwagklylvg 111
Cdd:PLN02193 152 KWIKVEQKGEgPGLRCSHGIAQVGNKIYSFGGEftPNQPIDkhlyVFDLETRTWSISPA--------------------- 210
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  112 gfTGDYPNETALTHLLIydpatdrwqvgaeipadrrrgSAGTvahdgVLYLVGGN--TRGHNSGYvpwldAFDTRTQRW- 188
Cdd:PLN02193 211 --TGDVPHLSCLGVRMV---------------------SIGS-----TLYVFGGRdaSRQYNGFY-----SFDTTTNEWk 257
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  189 --TRLPDAPHARDhFHAVVLDGK-LYAGGGRRSshdtgdtlSQTIPQLDVYDLRQATW---SVADATLpTPRAGAAAIAH 262
Cdd:PLN02193 258 llTPVEEGPTPRS-FHSMAADEEnVYVFGGVSA--------TARLKTLDSYNIVDKKWfhcSTPGDSF-SIRGGAGLEVV 327
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21110672  263 HGRVMLLGGESTAQVaghAEVESYDPATARWV---TGPALPRGRHGTQAAQVGGDLYIAAG 320
Cdd:PLN02193 328 QGKVWVVYGFNGCEV---DDVHYYDPVQDKWTqveTFGVRPSERSVFASAAVGKHIVIFGG 385
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
147-193 1.83e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 41.44  E-value: 1.83e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 21110672   147 RRGSAGTVAHDGVLYLVGG--NTRGHNSGYVpwldaFDTRTQRWTRLPD 193
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGfdGNQSLNSVEV-----YDPETNTWSKLPS 44
Kelch_6 pfam13964
Kelch motif;
153-198 3.66e-05

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 40.78  E-value: 3.66e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 21110672   153 TVAHDGVLYLVGGNTRGHNSGYVPWLdaFDTRTQRWTRLPDAPHAR 198
Cdd:pfam13964   7 VVSVGGYIYVFGGYTNASPALNKLEV--YNPLTKSWEELPPLPTPR 50
Kelch smart00612
Kelch domain;
159-208 1.06e-04

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 39.08  E-value: 1.06e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 21110672    159 VLYLVGGNTRGHNSGYVpwlDAFDTRTQRWTRLPDAPHARDHFHAVVLDG 208
Cdd:smart00612   1 KIYVVGGFDGGQRLKSV---EVYDPETNKWTPLPSMPTPRSGHGVAVING 47
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
33-130 1.96e-04

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 42.45  E-value: 1.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  33 GSTSQWQWRSVQAqgEPHARHENSMAAIGERLYVLGGRGE--RPLDIFDTRTRRWSRGSAPPLAVNHAQAAVWAGKLYLV 110
Cdd:COG3055 180 GSGFSNTWTTLAP--LPTARAGHAAAVLGGKILVFGGESGfsDEVEAYDPATNTWTALGELPTPRHGHAAVLTDGKVYVI 257
                        90       100
                ....*....|....*....|
gi 21110672 111 GGFTGDYPNETALTHLLIYD 130
Cdd:COG3055 258 GGETKPGVRTPLVTSAEVYD 277
Kelch smart00612
Kelch domain;
106-158 2.52e-04

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 38.31  E-value: 2.52e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 21110672    106 KLYLVGGFTGdypnETALTHLLIYDPATDRWQVGAEIPadRRRGSAGTVAHDG 158
Cdd:smart00612   1 KIYVVGGFDG----GQRLKSVEVYDPETNKWTPLPSMP--TPRSGHGVAVING 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
51-92 4.60e-04

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 37.59  E-value: 4.60e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 21110672    51 ARHENSMAAIGERLYVLGGR-GERPLD---IFDTRTRRWSRGSAPP 92
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFdGNQSLNsveVYDPETNTWSKLPSMP 46
Kelch_6 pfam13964
Kelch motif;
51-92 7.42e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 36.93  E-value: 7.42e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 21110672    51 ARHENSMAAIGERLYVLGGRGERP-----LDIFDTRTRRWSRGSAPP 92
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGYTNASpalnkLEVYNPLTKSWEELPPLP 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
100-141 2.87e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 35.28  E-value: 2.87e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 21110672   100 AAVWAGKLYLVGGFTGDypneTALTHLLIYDPATDRWQVGAE 141
Cdd:pfam01344   7 VVVVGGKIYVIGGFDGN----QSLNSVEVYDPETNTWSKLPS 44
Kelch_4 pfam13418
Galactose oxidase, central domain;
146-196 4.18e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 34.90  E-value: 4.18e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 21110672   146 RRRGSAGTVAHDGVLYLVGGntRGHNSGYVPWLDAFDTRTQRWTRLPDAPH 196
Cdd:pfam13418   1 PRAYHTSTSIPDDTIYLFGG--EGEDGTLLSDLWVFDLSTNEWTRLGSLPS 49
Kelch_6 pfam13964
Kelch motif;
97-146 7.31e-03

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 34.23  E-value: 7.31e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 21110672    97 HAQAAVWAGKLYLVGGFTGDYPnetALTHLLIYDPATDRWQVGAEIPADR 146
Cdd:pfam13964   4 FHSVVSVGGYIYVFGGYTNASP---ALNKLEVYNPLTKSWEELPPLPTPR 50
PHA02790 PHA02790
Kelch-like protein; Provisional
63-248 8.10e-03

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 38.10  E-value: 8.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672   63 RLYVLGGRGErpldifDTRTRRWSRGSA-----PPLAVNHAQAAVWA--GKLYLVGGFTgdyPNETALTHLLiydPATDR 135
Cdd:PHA02790 320 KLYVVGGLPN------PTSVERWFHGDAawvnmPSLLKPRCNPAVASinNVIYVIGGHS---ETDTTTEYLL---PNHDQ 387
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21110672  136 WQVGAEIPADRRRGSAGTVAHDgvLYLVGGNTrghnsgyvpwlDAFDTRTQRWTRLPDAPHARDHFHAVVLDGKL-YAGG 214
Cdd:PHA02790 388 WQFGPSTYYPHYKSCALVFGRR--LFLVGRNA-----------EFYCESSNTWTLIDDPIYPRDNPELIIVDNKLlLIGG 454
                        170       180       190
                 ....*....|....*....|....*....|....
gi 21110672  215 GRRSSHdtgdtlsqtIPQLDVYDLRQATWSVADA 248
Cdd:PHA02790 455 FYRGSY---------IDTIEVYNNRTYSWNIWDG 479
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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