|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 745.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKILYQ 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-374 |
1.91e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 371.82 E-value: 1.91e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 12 LKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 92 FICIYLHIGRGFYYGSylYKE----TWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWG 167
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 168 GFSVDNPTLTRFFALH-FLLPFLIAGITIVHLTFLHESGSNNPLGI----ISHCDKIPFHPYFSTKDILGLTLLFLPLLT 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 243 LAFFSPNllGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVehPFIIIGQAASFLYFFILLFMFPIIGTLE 374
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.92e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 285.42 E-value: 2.92e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 10 PLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 90 FFFICIYLHIGRGFYYGSY--LYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2109085512 168 GFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.45e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.07 E-value: 8.45e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 19 LIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 99 IGRGFYYG--SYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2109085512 177 TRFFALHFLLPFLIAGITIVHLTFLHESG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
244-340 |
6.85e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 6.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 244 AFFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLL-HMSKLRSMTFRPLS 322
Cdd:TIGR01156 55 AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVA 129
|
90
....*....|....*...
gi 2109085512 323 QMLFWLLTanlFILTWIG 340
Cdd:TIGR01156 130 TTVFLFGT---VVALWLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 745.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKILYQ 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 684.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MApNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00131 1 MA-SLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00131 80 RNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00131 160 LVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00131 240 TSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRP 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKIL 378
Cdd:MTH00131 320 LTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKAL 377
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 681.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 4 NIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 84 HANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVE 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 164 WAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTL 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 244 AFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2109085512 324 MLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKIL 378
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 671.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKIL 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLL 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 636.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 5 IRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 85 ANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 165 AWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 245 FFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQM 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2109085512 325 LFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPI 369
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
5-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 611.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 5 IRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLH 84
Cdd:MTH00145 5 LRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 85 ANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEW 164
Cdd:MTH00145 85 ANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 165 AWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLA 244
Cdd:MTH00145 165 VWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 245 FFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQM 324
Cdd:MTH00145 245 LFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQV 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2109085512 325 LFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLfMFPIIGTLENKILY 379
Cdd:MTH00145 325 LFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFL-ILPLVQKLWDNILD 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-379 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 605.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 5 IRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLH 84
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 85 ANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEW 164
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 165 AWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLA 244
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 245 FFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQM 324
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2109085512 325 LFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKILY 379
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 605.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 12 LKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 92 FICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 172 DNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLAFFSPNLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 252 GDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQMLFWLLTA 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 2109085512 332 NLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMF 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-379 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 563.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMfPIIGTLENKILY 379
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN-PLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
5-380 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 522.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 5 IRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLH 84
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 85 ANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEW 164
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 165 AWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLA 244
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 245 FFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQM 324
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2109085512 325 LFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKILYQ 380
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 516.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMFPIIGTLENKIL 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
4.15e-174 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 489.82 E-value: 4.15e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 1 MAPNIRKSHPLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLI 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 81 RNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHT 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 161 LVEWAWGGFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 241 LTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAASFLYfFILLFMFPIIGTLENKIL 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILY-FSYFIISPAISKLWDDLL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-381 |
3.81e-139 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 401.24 E-value: 3.81e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 17 NSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFFICIY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 97 LHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 177 TRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLAFFS--PNLLGDP 254
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 255 ENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQMLFWLLTANLF 334
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2109085512 335 ILTWIGSQPV-EHPFIIIGQAASFLYFFILLFMFPIIGTLENkILYQY 381
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN-LFYEY 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-374 |
1.91e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 371.82 E-value: 1.91e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 12 LKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 92 FICIYLHIGRGFYYGSylYKE----TWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWG 167
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 168 GFSVDNPTLTRFFALH-FLLPFLIAGITIVHLTFLHESGSNNPLGI----ISHCDKIPFHPYFSTKDILGLTLLFLPLLT 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 243 LAFFSPNllGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALIASILILFLCPLLHMSKLRSMTFRP 320
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2109085512 321 LSQMLFWLLTANLFILTWIGSQPVehPFIIIGQAASFLYFFILLFMFPIIGTLE 374
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-367 |
1.40e-118 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 347.70 E-value: 1.40e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 13 KIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 93 ICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 173 NPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDiLGLTLLFLPLLTLAFFSPNLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 253 DPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLcpLLHMSKLRSMTFRPLSQMLFWLLTAN 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYF--FIFVNNYTSCLNKLNKFLVFSFIVVN 317
|
330 340 350
....*....|....*....|....*....|....*
gi 2109085512 333 lFILTWIGSQPVEHPFIIIGQAASFLYFFILLFMF 367
Cdd:MTH00086 318 -VILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.92e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 285.42 E-value: 2.92e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 10 PLLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 90 FFFICIYLHIGRGFYYGSY--LYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2109085512 168 GFSVDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-367 |
1.94e-93 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 283.80 E-value: 1.94e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 11 LLKIINNSLIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASF 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 91 FFICIYLHIGRGFYYGSYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFS 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 171 VDNPTLTRFFALHFLLPFLIAGITIVHLTFLHESGSNNPLGII-SHCDKIPFHPYFSTKDILGLTLLFLPLLTLAFFSPN 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSnGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 250 LLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGvLALIASILILFLCPLLHMSKLRSMtfrpLSQMLFWLL 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*...
gi 2109085512 330 TANLFILTWIGSQPVEHPFIIIGQAASFLyffILLFMF 367
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL---MVLLLF 350
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.45e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.07 E-value: 8.45e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 19 LIDLPSPSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 99 IGRGFYYG--SYLYKETWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2109085512 177 TRFFALHFLLPFLIAGITIVHLTFLHESG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
9.58e-50 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 164.36 E-value: 9.58e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 208 NPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLAFFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2109085512 288 KLGGVLALIASILILFLCPLLHMSKLRSmTFRPLSQMLFWLLTANLFILTWIGSQPVEHPFIIIGQAA 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.41e-47 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 156.48 E-value: 2.41e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 259 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLLHMSKLRSMTFRPLSQMLFWLLTANLFILTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2109085512 339 IGSQPVEHPFIIIGQAASFLY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
4.25e-40 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 140.07 E-value: 4.25e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 89 SFFFICIYLHIGRGFYYGSYLYKE--TWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 167 GGFSVDNPTLTRFFALHF-LLPFLIAGITIVHLTFLHESGSNNPLGIISHCDKIPFHPYFSTKDILGLTLLFLPLLTLAF 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2109085512 246 FSPNLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
1.11e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 130.22 E-value: 1.11e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 34 FGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKE- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 113 -TWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFALH-FLLPFLI 190
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2109085512 191 AGITIVHLTFLHESGSNNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.33e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 121.75 E-value: 1.33e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 25 PSNISAWWNFGSLLGICLMTQIITGLLLAMHYTADTSLAFSSVAHICRDVQYGWLIRNLHANGASFFFICIYLHIGRGFY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 105 YGSYLYKE--TWNTGIILLLTLMVTAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFAL 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2109085512 183 H-FLLPFLIAGITIVHLTFLHESGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
244-340 |
7.41e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.02 E-value: 7.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 244 AFFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLL-HMSKLRSMTFRPLS 322
Cdd:CHL00058 55 AVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVA 129
|
90
....*....|....*...
gi 2109085512 323 QMLFWLLTanlFILTWIG 340
Cdd:CHL00058 130 TTVFLIGT---AVALWLG 144
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
244-340 |
1.24e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.42 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 244 AFFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLL-HMSKLRSMTFRPLS 322
Cdd:COG5679 56 AVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQNPFRRPVA 130
|
90
....*....|....*...
gi 2109085512 323 QMLFWLLTAnlfILTWIG 340
Cdd:COG5679 131 TAVFLFGTL---VTLWLG 145
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
244-340 |
6.85e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 6.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2109085512 244 AFFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILFLCPLL-HMSKLRSMTFRPLS 322
Cdd:TIGR01156 55 AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVA 129
|
90
....*....|....*...
gi 2109085512 323 QMLFWLLTanlFILTWIG 340
Cdd:TIGR01156 130 TTVFLFGT---VVALWLG 144
|
|
|