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Conserved domains on  [gi|2106325772|ref|WP_225430529|]
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DUF3397 domain-containing protein [Lentilactobacillus buchneri]

Protein Classification

DUF3397 domain-containing protein( domain architecture ID 10570932)

DUF3397 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 5-117 6.04e-11

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


:

Pssm-ID: 432154  Cd Length: 112  Bit Score: 54.89  E-value: 6.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106325772   5 VTFITQFLILFAVAGFLVVlRKNQFFRSKVPIKPLDFWPPILLYFIHEISKKGLSGSFIPEVVIVWLGLTLIVLIWQIFA 84
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIV-KKFRLKKKKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARK 79

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2106325772  85 NPNLTYKKFFITFWRFSDLFLFGCWIVVGIYVI 117
Cdd:pfam11877  80 KGEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 5-117 6.04e-11

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 54.89  E-value: 6.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106325772   5 VTFITQFLILFAVAGFLVVlRKNQFFRSKVPIKPLDFWPPILLYFIHEISKKGLSGSFIPEVVIVWLGLTLIVLIWQIFA 84
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIV-KKFRLKKKKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARK 79

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2106325772  85 NPNLTYKKFFITFWRFSDLFLFGCWIVVGIYVI 117
Cdd:pfam11877  80 KGEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 5-117 6.04e-11

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 54.89  E-value: 6.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106325772   5 VTFITQFLILFAVAGFLVVlRKNQFFRSKVPIKPLDFWPPILLYFIHEISKKGLSGSFIPEVVIVWLGLTLIVLIWQIFA 84
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIV-KKFRLKKKKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARK 79

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2106325772  85 NPNLTYKKFFITFWRFSDLFLFGCWIVVGIYVI 117
Cdd:pfam11877  80 KGEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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