hypothetical protein [Burkholderia vietnamiensis]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
PqqC super family | cl44232 | Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; |
99-293 | 1.10e-09 | ||||
Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; The actual alignment was detected with superfamily member COG5424: Pssm-ID: 444176 Cd Length: 228 Bit Score: 57.60 E-value: 1.10e-09
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Poly_export super family | cl40153 | Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved ... |
50-84 | 2.55e-03 | ||||
Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved in polysaccharide biosynthesis and/or export. The actual alignment was detected with superfamily member pfam02563: Pssm-ID: 426836 [Multi-domain] Cd Length: 74 Bit Score: 36.01 E-value: 2.55e-03
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Name | Accession | Description | Interval | E-value | ||||
PqqC | COG5424 | Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; |
99-293 | 1.10e-09 | ||||
Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; Pssm-ID: 444176 Cd Length: 228 Bit Score: 57.60 E-value: 1.10e-09
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Poly_export | pfam02563 | Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved ... |
50-84 | 2.55e-03 | ||||
Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved in polysaccharide biosynthesis and/or export. Pssm-ID: 426836 [Multi-domain] Cd Length: 74 Bit Score: 36.01 E-value: 2.55e-03
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TenA_PqqC | cd19370 | TenA_like proteins, including PqqC and CADD; This family contains proteins with similarity to ... |
125-215 | 2.62e-03 | ||||
TenA_like proteins, including PqqC and CADD; This family contains proteins with similarity to TenA, and includes bacterial coenzyme pyrroloquinoline quinone (PQQ) synthesis protein C or PQQC proteins. PQQ is the prosthetic group of several bacterial enzymes, including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC catalyzes the last step of PQQ biogenesis which involves a ring closure and an eight-electron oxidation of the substrate [3a-(2-amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9-dicarboxylic acid (AHQQ)]. The exact molecular function of members of this family is unclear. Also belonging to this family is Chlamydia protein CADD (Chlamydia protein Associating with Death Domains), a redox protein toxin unique to Chlamydia species, which modulates host cell apoptosis; its redox activity and death domain binding ability may be required for this biological activity. CADD may have a role in folate metabolism. Pssm-ID: 381705 Cd Length: 219 Bit Score: 38.73 E-value: 2.62e-03
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Wza | COG1596 | Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the ... |
50-114 | 5.03e-03 | ||||
Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 441204 [Multi-domain] Cd Length: 182 Bit Score: 37.57 E-value: 5.03e-03
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Name | Accession | Description | Interval | E-value | ||||
PqqC | COG5424 | Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; |
99-293 | 1.10e-09 | ||||
Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; Pssm-ID: 444176 Cd Length: 228 Bit Score: 57.60 E-value: 1.10e-09
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Poly_export | pfam02563 | Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved ... |
50-84 | 2.55e-03 | ||||
Polysaccharide biosynthesis/export protein; This is a family of periplasmic proteins involved in polysaccharide biosynthesis and/or export. Pssm-ID: 426836 [Multi-domain] Cd Length: 74 Bit Score: 36.01 E-value: 2.55e-03
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TenA_PqqC | cd19370 | TenA_like proteins, including PqqC and CADD; This family contains proteins with similarity to ... |
125-215 | 2.62e-03 | ||||
TenA_like proteins, including PqqC and CADD; This family contains proteins with similarity to TenA, and includes bacterial coenzyme pyrroloquinoline quinone (PQQ) synthesis protein C or PQQC proteins. PQQ is the prosthetic group of several bacterial enzymes, including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC catalyzes the last step of PQQ biogenesis which involves a ring closure and an eight-electron oxidation of the substrate [3a-(2-amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9-dicarboxylic acid (AHQQ)]. The exact molecular function of members of this family is unclear. Also belonging to this family is Chlamydia protein CADD (Chlamydia protein Associating with Death Domains), a redox protein toxin unique to Chlamydia species, which modulates host cell apoptosis; its redox activity and death domain binding ability may be required for this biological activity. CADD may have a role in folate metabolism. Pssm-ID: 381705 Cd Length: 219 Bit Score: 38.73 E-value: 2.62e-03
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Wza | COG1596 | Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the ... |
50-114 | 5.03e-03 | ||||
Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 441204 [Multi-domain] Cd Length: 182 Bit Score: 37.57 E-value: 5.03e-03
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Blast search parameters | ||||
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