|
Name |
Accession |
Description |
Interval |
E-value |
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
14-332 |
1.00e-21 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 97.15 E-value: 1.00e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 14 PTGPQPRPRHGHRAVAIKDLMVVFGGGNEG-IVDELHVYNTATNQWfvplTKGDIPPGCAAYGF--VVDGTRILVFGGMV 90
Cdd:COG3055 5 SLPDLPTPRSEAAAALLDGKVYVAGGLSGGsASNSFEVYDPATNTW----SELAPLPGPPRHHAaaVAQDGKLYVFGGFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 91 EY---GKYSNELYELQASRWEWKRLKPkhpkheqPPCPRLGHSFTLIGNKVFLFGGlaNDSEDPKNNIPRYlnDLYTLEl 167
Cdd:COG3055 81 GAnpsSTPLNDVYVYDPATNTWTKLAP-------MPTPRGGATALLLDGKIYVVGG--WDDGGNVAWVEVY--DPATGT- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 168 lpngataWevpQTHGHAPPPRESHTGVAYTDrvtGKscLVIYGGMSGSrlgdlwfldVDSMTWNKPIVHgptPLPRSLHT 247
Cdd:COG3055 149 -------W---TQLAPLPTPRDHLAAAVLPD---GK--ILVIGGRNGS---------GFSNTWTTLAPL---PTARAGHA 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 248 ATLIGHRMYVFGGwvplvvddvKVATHEKEWkctstlaCLNLETLTWEQLTvdsleeNVPRARAGHCAVGVHSRLYVWSG 327
Cdd:COG3055 202 AAVLGGKILVFGG---------ESGFSDEVE-------AYDPATNTWTALG------ELPTPRHGHAAVLTDGKVYVIGG 259
|
....*..
gi 2089792603 328 --RDGYR 332
Cdd:COG3055 260 etKPGVR 266
|
|
| PLN02193 |
PLN02193 |
nitrile-specifier protein |
7-310 |
5.15e-21 |
|
nitrile-specifier protein
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 98.49 E-value: 5.15e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 7 KWKRI-TNPTGPQPRPRHGHRAVAIKdlMVVFGGG---NEGIVDELHVYNTATNQWFVPLTKGDIPP-GCAAYGFVVDGT 81
Cdd:PLN02193 152 KWIKVeQKGEGPGLRCSHGIAQVGNK--IYSFGGEftpNQPIDKHLYVFDLETRTWSISPATGDVPHlSCLGVRMVSIGS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 82 RILVFGGMVEYGKYsNELYELQASRWEWKRLKPKhpkhEQPPCPRLGHSFTLIGNKVFLFGGLANDSEdpknnipryLND 161
Cdd:PLN02193 230 TLYVFGGRDASRQY-NGFYSFDTTTNEWKLLTPV----EEGPTPRSFHSMAADEENVYVFGGVSATAR---------LKT 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 162 LYTLELlpngataweVPQTHGHAPPPRESHT--GVAYTDRVTGKsCLVIYGgMSGSRLGDLWFLDVDSMTWNKPIVHGPT 239
Cdd:PLN02193 296 LDSYNI---------VDKKWFHCSTPGDSFSirGGAGLEVVQGK-VWVVYG-FNGCEVDDVHYYDPVQDKWTQVETFGVR 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2089792603 240 PLPRSLHTATLIGHRMYVFGGWVPLvvdDVKvaTHEKEWKCTSTLACLNLETLTWEQLTVDSLEENVPRAR 310
Cdd:PLN02193 365 PSERSVFASAAVGKHIVIFGGEIAM---DPL--AHVGPGQLTDGTFALDTETLQWERLDKFGEEEETPSSR 430
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
993-1202 |
5.28e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.13 E-value: 5.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 993 QEMEQDPAPVASTEEPQESSTDPTDEPEPPKPseseetqAPKIEEAssqETAESEPATQPETQSSEITTESTSEPEPpse 1072
Cdd:PRK10811 853 VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVS-------APVVEAV---AEVVEEPVVVAEPQPEEVVVVETTHPEV--- 919
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1073 gdmqiISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENqSNTIVAAdlpPLHEKSDAEAlldaledq 1152
Cdd:PRK10811 920 -----IAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAET-AEVVVAE---PEVVAQPAAP-------- 982
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 1153 tfEPADEEMPAEKDNIKKENSPGALPPESI--KLEAPEPMITEPSPPIVPQA 1202
Cdd:PRK10811 983 --VVAEVAAEVETVTAVEPEVAPAQVPEATveHNHATAPMTRAPAPEYVPEA 1032
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
925-1095 |
1.35e-07 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 54.87 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 925 NGNEASVTAALVSQ-LTAGEPMQVDGEGNFVIPQVDGPCDLLSSDDEDAGAPETTTQSEAALESLNEDSQEMEQDPApVA 1003
Cdd:pfam06390 65 NAHHRSAAAAAAAQvFPEPSEPESDHEDEDFEPELARPECLEYDEDDFDTETDSETEPESDIESETEFETEPETEPD-TA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1004 STEEPQessTDPTDEPEPPKPSESEETQA-PKIEEASSQETAESEPA-TQPETQSSeittESTSEPEPPSEGDM-QIISD 1080
Cdd:pfam06390 144 PTTEPE---TEPEDEPGPVVPKGATFHQSlTERLHALKLQSADASPRrAPPSTQEP----ESAREGEEPERGPLdKDPRD 216
|
170
....*....|....*
gi 2089792603 1081 PPSADNSVKSEATQP 1095
Cdd:pfam06390 217 PEEEEEEKEEEKQQP 231
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1389-1488 |
8.89e-07 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 53.47 E-value: 8.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1389 LESGTAYKFRVAAVNSCG-QSAWSEVSAFKTCLPGfPGAPSAIKISKSAEGA-QLSWEPPPShlGPILEYSVYlavRSAS 1466
Cdd:COG3401 292 LTNGTTYYYRVTAVDAAGnESAPSNVVSVTTDLTP-PAAPSGLTATAVGSSSiTLSWTASSD--ADVTGYNVY---RSTS 365
|
90 100
....*....|....*....|..
gi 2089792603 1467 avpnSTGEATTVATTPTQLAFI 1488
Cdd:COG3401 366 ----GGGTYTKIAETVTTTSYT 383
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
670-1347 |
1.11e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 53.48 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 670 SGLVAMSKGQSIAGKQTIMITKPGGNGGLVGRTNQIIVVTTGSGLRAVQAVTTSQAGAGQAGNLTT-PVNVLPLSAANHV 748
Cdd:COG5271 29 AGLDTQSETASEREDKLPDTDKDLLILTDADAASDEGKLLDLKSADGAALSAESDAGASLITAANLeEGDIAGNAADDSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 749 TNQQGVKMIVVSSGAMVGGTSGKPITITVPGQGGVPKTVTIATKGGQQTIFNPGKSQIVTMPQIQKGQDPLAAGKPVTLQ 828
Cdd:COG5271 109 DEESDANAKEDATDDADSSGDAQGDPLATDTLGGGDLDLATKDGDELLPSLADNDEAAADEGDELAADGDDTLAVADAIE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 829 MSGGLGAKtVTLMPTSSSIVTTSADSIDTtkmmfvpqkQPSASLASTSDGPATTDAALAALAAEAGLIDPVQEPSGGLSF 908
Cdd:COG5271 189 ATPGGTDA-VELTATLGATVTTDPGDSVA---------ADDDLAAEEGASAVVEEEDASEDAVAAADETLLADDDDTESA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 909 MVADDVAGDEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGN----FVIPQVDGPCDLLSSDDEDAGAPETTTQSEAA 984
Cdd:COG5271 259 GATAEVGGTPDTDDEATDDADGLEAAEDDALDAELTAAQAADPEsdddADDSTLAALEGAAEDTEIATADELAAADDEDD 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 985 LESLNEDSQE-MEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTES 1063
Cdd:COG5271 339 DDSAAEDAAEeAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1064 TSEPEPPSEGDMQIISDPPSADNSVKS-EATQPVVDPIAERMAEIVTKDEKSEEKSDGEenqsntivAADLPPLHEKSDA 1142
Cdd:COG5271 419 EADEDASAGETEDESTDVTSAEDDIATdEEADSLADEEEEAEAELDTEEDTESAEEDAD--------GDEATDEDDASDD 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1143 EALLDALEDQTFEPA-DEEMPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTNAPKIPSI 1221
Cdd:COG5271 491 GDEEEAEEDAEAEADsDELTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDE 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1222 PVAPPTTVPTVI-----PTLLSPRQIKSDPRDEPMEDDKPLDES---------------MSSVTNGNSNADQELEALHKA 1281
Cdd:COG5271 571 AEAETEDATENAdadetEESADESEEAEASEDEAAEEEEADDDEadadadgaadeeeteEEAAEDEAAEPETDASEAADE 650
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2089792603 1282 -----IQREAKDDLPIKKEPLKQEKENEPRPEAGDDSTALTTLATAALGSAEQPVKVKTELTDDEKKDIDW 1347
Cdd:COG5271 651 dadaeTEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEA 721
|
|
| Agg_substance |
NF033875 |
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ... |
990-1173 |
6.93e-06 |
|
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.
Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 51.25 E-value: 6.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 990 EDSQEMEQDPAPVASTEEPqeSSTDPTDEPEPPKPSESEE--------TQAPKIEE-ASSQETAESEPATQPETQSSE-- 1058
Cdd:NF033875 39 DNVQAAELDTQPGTTTVQP--DNPDPQSGSETPKTAVSEEatvqkdttSQPTKVEEvASEKNGAEQSSATPNDTTNAQqp 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1059 -------------ITTESTSEP--EP----PSEGDM-QIISDP-----PSADNSVKSEATQP---VVDPIAERMAEIVTK 1110
Cdd:NF033875 117 tvgaeksaqeqpvVSPETTNEPlgQPtevaPAENEAnKSTSIPkefetPDVDKAVDEAKKDPnitVVEKPAEDLGNVSSK 196
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2089792603 1111 DEKSEEKS--DGEENQSNTIV--AADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNIKKENS 1173
Cdd:NF033875 197 DLAAKEKEvdQLQKEQAKKIAqqAAELKAKNEKIAKENAEIAAKNKAEKERYEKEVAEYNKHKNENG 263
|
|
| Mpp10 |
COG5384 |
U3 small nucleolar ribonucleoprotein component [Translation, ribosomal structure and ... |
917-1203 |
1.69e-05 |
|
U3 small nucleolar ribonucleoprotein component [Translation, ribosomal structure and biogenesis];
Pssm-ID: 227674 [Multi-domain] Cd Length: 569 Bit Score: 49.30 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 917 DEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGNfvIPQVDGPCDLLSSDDEdagapetttqseAALESLNEDSQEME 996
Cdd:COG5384 43 DEITVDGLDANQVWWQVKLVLDSIDGDLIQGIQELK--DPSLDGSTLNSSSGEE------------SELEEAESVFKEKQ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 997 QDPAPVastEEPQESSTDPTDEPEPPKPSESEETQApkieEASSQETAESEPATQP--------ETQSSEITTESTSEPE 1068
Cdd:COG5384 109 MLSADV---SEIEEQSNDSLSENDEEPSMDDEKTSA----EAAREEFAEEKRIPDPygindkffDLEKFNRDTLAAEDSN 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1069 PPSEGD----MQIISDPPSADNSVKSEATQPVVDP--IAERMAEIVTKDEKSEEKSDGEENQSNT--------IVAADLP 1134
Cdd:COG5384 182 EASEGSededIDYFQDMPSDDEEEEAIYYEDFFDKptKEPVKKHSDVKDPKEDEELDEEEHDSAMdkvkldlfADEEDEP 261
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2089792603 1135 PLHEKSDAEA-LLDALE------DQTFEPADEEMPAEKD-NIKKENSPGALPPESIKLEAPEpmiTEPSPPIVPQAT 1203
Cdd:COG5384 262 NAEGVGEASDkNLSSFEkqqiemDEQIEELEKELVAPKEwKYAGEVSAKKRPKNSLLAEELE---FKQGAKPVPVST 335
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
1019-1296 |
3.78e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 48.23 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1019 PEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEIttestsEPEPPSEGdMQIISDPPSADNSVKS--EATQPV 1096
Cdd:NF033839 281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEV------KPQLEKPK-PEVKPQPEKPKPEVKPqlETPKPE 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1097 VDPIAERmaeivtkdEKSEEKSDGEENQSNTIVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPaEKDNIKKENSPGA 1176
Cdd:NF033839 354 VKPQPEK--------PKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKP-QPEKPKPEVKPQP 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1177 LPPESIKLEAPEpmitEPSPPIVPQATITPIIAPPTTNAPKiPSIPVAPPTTVPTVIPTLLSPRQIKSDPRdepMEDDKP 1256
Cdd:NF033839 425 EKPKPEVKPQPE----KPKPEVKPQPEKPKPEVKPQPETPK-PEVKPQPEKPKPEVKPQPEKPKPDNSKPQ---ADDKKP 496
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2089792603 1257 ldesmsSVTNgnsNADQELEALHKAIQREAKDDLPIKKEP 1296
Cdd:NF033839 497 ------STPN---NLSKDKQPSNQASTNEKATNKPKKSLP 527
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
206-251 |
5.70e-05 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 41.89 E-value: 5.70e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2089792603 206 LVIYGG---MSGSRLGDLWFLDVDSMTWnKPIvhGPTPLPRSLHTATLI 251
Cdd:pfam13415 4 LYIFGGlgfDGQTRLNDLYVYDLDTNTW-TQI--GDLPPPRSGHSATYI 49
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
974-1073 |
5.94e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 44.62 E-value: 5.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 974 APETTTQSEAALESLNEDSQEMEQdPAPVASTEEPQesstdptdePEPPKPSESEETQAPKIEEASSQETAESEPATQPE 1053
Cdd:NF033838 398 AEEEAKRKAAEEDKVKEKPAEQPQ-PAPAPQPEKPA---------PKPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRL 467
|
90 100
....*....|....*....|
gi 2089792603 1054 TQSSEITTESTSEPEPPSEG 1073
Cdd:NF033838 468 TQQQPPKTEKPAQPSTPKTG 487
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
911-1074 |
8.19e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 911 ADDVAGDEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGNFVIPQVDgpcdllSSDDEDAGAPETTtqSEAALEslNE 990
Cdd:PRK13108 305 AAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVA------DRDGESTPAVEET--SEADIE--RE 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 991 DSQEMEQDPApvastEEPQESSTDPTDEPEPPKPSESEEtqaPKIEEASSQETAESEP-ATQPETQSSEITTESTSEPEP 1069
Cdd:PRK13108 375 QPGDLAGQAP-----AAHQVDAEAASAAPEEPAALASEA---HDETEPEVPEKAAPIPdPAKPDELAVAGPGDDPAEPDG 446
|
....*
gi 2089792603 1070 PSEGD 1074
Cdd:PRK13108 447 IRRQD 451
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
353-609 |
9.56e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 9.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 353 PAPSRVQLVRASTHSLEVSWTATPSAQYyilqiQKYDMPPATSAFPVAAPPPTTTPALTPATPPTIP-VCSPPVTTAAAT 431
Cdd:PHA03247 2656 PAPGRVSRPRRARRLGRAAQASSPPQRP-----RRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSaTPLPPGPAAARQ 2730
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 432 PMIPAVVTPVRPTVPQ--AAPIRVQTPVQMPPVSKPISSPVVAKPASPMTPrgnliRIRSPLVTSASIVASPVPASTIAA 509
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAgpATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR-----RLTRPAVASLSESRESLPSPWDPA 2805
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 510 TTIEQPTVVNPATTVSQSPSAMSGiAALAAAAAATPKISMNNIPMISQAGtntirmkSVQPGQQIRFAAP-GATVLRTAS 588
Cdd:PHA03247 2806 DPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPPSLPLGG-------SVAPGGDVRRRPPsRSPAAKPAA 2877
|
250 260
....*....|....*....|.
gi 2089792603 589 PQQSKQIILQKPGQNITGQPQ 609
Cdd:PHA03247 2878 PARPPVRRLARPAVSRSTESF 2898
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1389-1418 |
1.03e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.79 E-value: 1.03e-03
10 20 30
....*....|....*....|....*....|
gi 2089792603 1389 LESGTAYKFRVAAVNSCGQSAWSEVSAFKT 1418
Cdd:cd00063 64 LKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
|
| rad2 |
TIGR00600 |
DNA excision repair protein (rad2); All proteins in this family for which functions are known ... |
1034-1276 |
3.78e-03 |
|
DNA excision repair protein (rad2); All proteins in this family for which functions are known are flap endonucleases that generate the 3' incision next to DNA damage as part of nucleotide excision repair. This family is related to many other flap endonuclease families including the fen1 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273166 [Multi-domain] Cd Length: 1034 Bit Score: 42.19 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1034 KIEEASSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVdpiaermaEIVTKDEK 1113
Cdd:TIGR00600 336 KPESESIVEAEPPSPRTLLAKQAAMSESSSEDSDESEWERQELKRNNVAFVDDGSLSPRTLQAI--------GQALDDDE 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1114 SEEKSDGEENQSN------TIVAADLPplhEKSDAEALLDALEDQTFE--PADEEMPAEKDNIKKENSP--------GAL 1177
Cdd:TIGR00600 408 DKKVSASSDDQASpskktkMLLISRIE---VEDDDLDYLDQGEGIPLMaaLQLSSVNSKPEAVASTKIArevtssghEAV 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1178 PPESIKLEAP-EPMITEPSP---PIVPQATITPIIAPPTTNAPKIPS---IPVAPPTTVPTviptllSPRQIKSDPRDEP 1250
Cdd:TIGR00600 485 PKAVQSLLLGaTNDSPIPSEftiLDRKSELSIERTVKPVSSEFGLPSqreDKLAIPTEGTQ------NLQGISDHPEQFE 558
|
250 260
....*....|....*....|....*.
gi 2089792603 1251 MEDDKPLDESmssvTNGNSNADQELE 1276
Cdd:TIGR00600 559 FQNELSPLET----KNNESNLSSDAE 580
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
419-641 |
6.25e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.44 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 419 PVCSPPVTTAAATPMIPAVVTPV-RPTVPQAAPIRVQTPVQMPpvSKPISSPVVAKpaspMTPRGNLIRIRSPLVTSASI 497
Cdd:pfam05109 544 PTSAVTTPTPNATSPTPAVTTPTpNATIPTLGKTSPTSAVTTP--TPNATSPTVGE----TSPQANTTNHTLGGTSSTPV 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 498 VASPVPASTIAATTIEQPTVVNPATTVSQSPSAMSGIAALAAAAAATPKISM---------NNIPMISQAGTNTIRMKSV 568
Cdd:pfam05109 618 VTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLltsahptggENITQVTPASTSTHHVSTS 697
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2089792603 569 QPGQQirfaaPGATVLRTASPQQSKQiilQKPGQ-NITG--QPQIVHLVKTTQGMMATVPKMSLIPGKNVQGAGGK 641
Cdd:pfam05109 698 SPAPR-----PGTTSQASGPGNSSTS---TKPGEvNVTKgtPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGK 765
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
1011-1310 |
6.84e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 6.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1011 SSTDPTDEPEPPKPsESEETQAPkieeasSQETAESEPATQPETQSSEI--TTESTSEPEPPSEGDMQIISDPPSADNSV 1088
Cdd:NF033839 151 SSSGSSTKPETPQP-ENPEHQKP------TTPAPDTKPSPQPEGKKPSVpdINQEKEKAKLAVATYMSKILDDIQKHHLQ 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1089 KSEATQPVvdpiaermAEIVTKDEKSEEKSDGEENqsntiVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNI 1168
Cdd:NF033839 224 KEKHRQIV--------ALIKELDELKKQALSEIDN-----VNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNK 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1169 KKEN-SPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTNAPKiPSIPVAPPTTVPTVIPTLLSPRqiksdPR 1247
Cdd:NF033839 291 KPSApKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPK-PEVKPQLETPKPEVKPQPEKPK-----PE 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2089792603 1248 DEPmEDDKPLDESMSSVTNGNSNADQELEALHKAIQREAKDDLP-IKKEPLKQEKENEPRPEAG 1310
Cdd:NF033839 365 VKP-QPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKP 427
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
14-332 |
1.00e-21 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 97.15 E-value: 1.00e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 14 PTGPQPRPRHGHRAVAIKDLMVVFGGGNEG-IVDELHVYNTATNQWfvplTKGDIPPGCAAYGF--VVDGTRILVFGGMV 90
Cdd:COG3055 5 SLPDLPTPRSEAAAALLDGKVYVAGGLSGGsASNSFEVYDPATNTW----SELAPLPGPPRHHAaaVAQDGKLYVFGGFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 91 EY---GKYSNELYELQASRWEWKRLKPkhpkheqPPCPRLGHSFTLIGNKVFLFGGlaNDSEDPKNNIPRYlnDLYTLEl 167
Cdd:COG3055 81 GAnpsSTPLNDVYVYDPATNTWTKLAP-------MPTPRGGATALLLDGKIYVVGG--WDDGGNVAWVEVY--DPATGT- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 168 lpngataWevpQTHGHAPPPRESHTGVAYTDrvtGKscLVIYGGMSGSrlgdlwfldVDSMTWNKPIVHgptPLPRSLHT 247
Cdd:COG3055 149 -------W---TQLAPLPTPRDHLAAAVLPD---GK--ILVIGGRNGS---------GFSNTWTTLAPL---PTARAGHA 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 248 ATLIGHRMYVFGGwvplvvddvKVATHEKEWkctstlaCLNLETLTWEQLTvdsleeNVPRARAGHCAVGVHSRLYVWSG 327
Cdd:COG3055 202 AAVLGGKILVFGG---------ESGFSDEVE-------AYDPATNTWTALG------ELPTPRHGHAAVLTDGKVYVIGG 259
|
....*..
gi 2089792603 328 --RDGYR 332
Cdd:COG3055 260 etKPGVR 266
|
|
| PLN02193 |
PLN02193 |
nitrile-specifier protein |
7-310 |
5.15e-21 |
|
nitrile-specifier protein
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 98.49 E-value: 5.15e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 7 KWKRI-TNPTGPQPRPRHGHRAVAIKdlMVVFGGG---NEGIVDELHVYNTATNQWFVPLTKGDIPP-GCAAYGFVVDGT 81
Cdd:PLN02193 152 KWIKVeQKGEGPGLRCSHGIAQVGNK--IYSFGGEftpNQPIDKHLYVFDLETRTWSISPATGDVPHlSCLGVRMVSIGS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 82 RILVFGGMVEYGKYsNELYELQASRWEWKRLKPKhpkhEQPPCPRLGHSFTLIGNKVFLFGGLANDSEdpknnipryLND 161
Cdd:PLN02193 230 TLYVFGGRDASRQY-NGFYSFDTTTNEWKLLTPV----EEGPTPRSFHSMAADEENVYVFGGVSATAR---------LKT 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 162 LYTLELlpngataweVPQTHGHAPPPRESHT--GVAYTDRVTGKsCLVIYGgMSGSRLGDLWFLDVDSMTWNKPIVHGPT 239
Cdd:PLN02193 296 LDSYNI---------VDKKWFHCSTPGDSFSirGGAGLEVVQGK-VWVVYG-FNGCEVDDVHYYDPVQDKWTQVETFGVR 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2089792603 240 PLPRSLHTATLIGHRMYVFGGWVPLvvdDVKvaTHEKEWKCTSTLACLNLETLTWEQLTVDSLEENVPRAR 310
Cdd:PLN02193 365 PSERSVFASAAVGKHIVIFGGEIAM---DPL--AHVGPGQLTDGTFALDTETLQWERLDKFGEEEETPSSR 430
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
63-333 |
4.53e-18 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 86.36 E-value: 4.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 63 TKGDIP-PGCAAYGFVVDGtRILVFGGMvEYGKYSNELYELQASRWEWKRLKPkhpkheqPPCPRLGHSFT-LIGNKVFL 140
Cdd:COG3055 5 SLPDLPtPRSEAAAALLDG-KVYVAGGL-SGGSASNSFEVYDPATNTWSELAP-------LPGPPRHHAAAvAQDGKLYV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 141 FGGLandseDPKNNIPRYLNDLYTLellpNGAT-AWevpQTHGHAPPPRESHTGVAYTDRVtgkscLVIYGGMSGSRLGD 219
Cdd:COG3055 76 FGGF-----TGANPSSTPLNDVYVY----DPATnTW---TKLAPMPTPRGGATALLLDGKI-----YVVGGWDDGGNVAW 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 220 LWFLDVDSMTWNKPivhGPTPLPRSLHTAT-LIGHRMYVFGGwvplvvDDVKVAThekewkctstlaclnletLTWEQLt 298
Cdd:COG3055 139 VEVYDPATGTWTQL---APLPTPRDHLAAAvLPDGKILVIGG------RNGSGFS------------------NTWTTL- 190
|
250 260 270
....*....|....*....|....*....|....*
gi 2089792603 299 vdsleENVPRARAGHCAVGVHSRLYVWSGRDGYRK 333
Cdd:COG3055 191 -----APLPTARAGHAAAVLGGKILVFGGESGFSD 220
|
|
| PLN02153 |
PLN02153 |
epithiospecifier protein |
3-321 |
1.64e-15 |
|
epithiospecifier protein
Pssm-ID: 177814 [Multi-domain] Cd Length: 341 Bit Score: 80.03 E-value: 1.64e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 3 APMLK--WKRITNPTGPQPRPRHGHRAVAIKDLMVVFGG---GNEGIVDELHVYNTATNQWFVPLTKGDIPP-GCAAYGF 76
Cdd:PLN02153 2 APTLQggWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGelkPNEHIDKDLYVFDFNTHTWSIAPANGDVPRiSCLGVRM 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 77 VVDGTRILVFGGMVEYGKYSNeLYELQASRWEWKRLKPKhpKHEQPPCPRLGHSFTLIGNKVFLFGGLandSEDPKNNIP 156
Cdd:PLN02153 82 VAVGTKLYIFGGRDEKREFSD-FYSYDTVKNEWTFLTKL--DEEGGPEARTFHSMASDENHVYVFGGV---SKGGLMKTP 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 157 RYLNdlyTLELLPNGATAWevpqthGHAPPPRES--HTGVAYTDRVTGKSCLV-------IYGGMSGSRLGDLWFLDVDS 227
Cdd:PLN02153 156 ERFR---TIEAYNIADGKW------VQLPDPGENfeKRGGAGFAVVQGKIWVVygfatsiLPGGKSDYESNAVQFFDPAS 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 228 MTWNKPIVHGPTPLPRSLHTATLIGHRMYVFGGWV-PlvvdDVKvaTHEKEWKCTSTLACLNLETLTWEQLTvDSLEENV 306
Cdd:PLN02153 227 GKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVwP----DLK--GHLGPGTLSNEGYALDTETLVWEKLG-ECGEPAM 299
|
330
....*....|....*
gi 2089792603 307 PRARAGHCAVGVHSR 321
Cdd:PLN02153 300 PRGWTAYTTATVYGK 314
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
993-1202 |
5.28e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.13 E-value: 5.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 993 QEMEQDPAPVASTEEPQESSTDPTDEPEPPKPseseetqAPKIEEAssqETAESEPATQPETQSSEITTESTSEPEPpse 1072
Cdd:PRK10811 853 VQVEEQREAEEVQVQPVVAEVPVAAAVEPVVS-------APVVEAV---AEVVEEPVVVAEPQPEEVVVVETTHPEV--- 919
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1073 gdmqiISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENqSNTIVAAdlpPLHEKSDAEAlldaledq 1152
Cdd:PRK10811 920 -----IAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAET-AEVVVAE---PEVVAQPAAP-------- 982
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 1153 tfEPADEEMPAEKDNIKKENSPGALPPESI--KLEAPEPMITEPSPPIVPQA 1202
Cdd:PRK10811 983 --VVAEVAAEVETVTAVEPEVAPAQVPEATveHNHATAPMTRAPAPEYVPEA 1032
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
925-1095 |
1.35e-07 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 54.87 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 925 NGNEASVTAALVSQ-LTAGEPMQVDGEGNFVIPQVDGPCDLLSSDDEDAGAPETTTQSEAALESLNEDSQEMEQDPApVA 1003
Cdd:pfam06390 65 NAHHRSAAAAAAAQvFPEPSEPESDHEDEDFEPELARPECLEYDEDDFDTETDSETEPESDIESETEFETEPETEPD-TA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1004 STEEPQessTDPTDEPEPPKPSESEETQA-PKIEEASSQETAESEPA-TQPETQSSeittESTSEPEPPSEGDM-QIISD 1080
Cdd:pfam06390 144 PTTEPE---TEPEDEPGPVVPKGATFHQSlTERLHALKLQSADASPRrAPPSTQEP----ESAREGEEPERGPLdKDPRD 216
|
170
....*....|....*
gi 2089792603 1081 PPSADNSVKSEATQP 1095
Cdd:pfam06390 217 PEEEEEEKEEEKQQP 231
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
14-103 |
6.32e-07 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 52.85 E-value: 6.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 14 PTGPQPRPRHGHRAVAIKDLMVVFGGGNeGIVDELHVYNTATNQWFvplTKGDIPPGCAAYGFVVDGTRILVFGGMVEYG 93
Cdd:COG3055 189 TLAPLPTARAGHAAAVLGGKILVFGGES-GFSDEVEAYDPATNTWT---ALGELPTPRHGHAAVLTDGKVYVIGGETKPG 264
|
90
....*....|
gi 2089792603 94 KYSNELYELQ 103
Cdd:COG3055 265 VRTPLVTSAE 274
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1389-1488 |
8.89e-07 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 53.47 E-value: 8.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1389 LESGTAYKFRVAAVNSCG-QSAWSEVSAFKTCLPGfPGAPSAIKISKSAEGA-QLSWEPPPShlGPILEYSVYlavRSAS 1466
Cdd:COG3401 292 LTNGTTYYYRVTAVDAAGnESAPSNVVSVTTDLTP-PAAPSGLTATAVGSSSiTLSWTASSD--ADVTGYNVY---RSTS 365
|
90 100
....*....|....*....|..
gi 2089792603 1467 avpnSTGEATTVATTPTQLAFI 1488
Cdd:COG3401 366 ----GGGTYTKIAETVTTTSYT 383
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
670-1347 |
1.11e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 53.48 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 670 SGLVAMSKGQSIAGKQTIMITKPGGNGGLVGRTNQIIVVTTGSGLRAVQAVTTSQAGAGQAGNLTT-PVNVLPLSAANHV 748
Cdd:COG5271 29 AGLDTQSETASEREDKLPDTDKDLLILTDADAASDEGKLLDLKSADGAALSAESDAGASLITAANLeEGDIAGNAADDSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 749 TNQQGVKMIVVSSGAMVGGTSGKPITITVPGQGGVPKTVTIATKGGQQTIFNPGKSQIVTMPQIQKGQDPLAAGKPVTLQ 828
Cdd:COG5271 109 DEESDANAKEDATDDADSSGDAQGDPLATDTLGGGDLDLATKDGDELLPSLADNDEAAADEGDELAADGDDTLAVADAIE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 829 MSGGLGAKtVTLMPTSSSIVTTSADSIDTtkmmfvpqkQPSASLASTSDGPATTDAALAALAAEAGLIDPVQEPSGGLSF 908
Cdd:COG5271 189 ATPGGTDA-VELTATLGATVTTDPGDSVA---------ADDDLAAEEGASAVVEEEDASEDAVAAADETLLADDDDTESA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 909 MVADDVAGDEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGN----FVIPQVDGPCDLLSSDDEDAGAPETTTQSEAA 984
Cdd:COG5271 259 GATAEVGGTPDTDDEATDDADGLEAAEDDALDAELTAAQAADPEsdddADDSTLAALEGAAEDTEIATADELAAADDEDD 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 985 LESLNEDSQE-MEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTES 1063
Cdd:COG5271 339 DDSAAEDAAEeAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1064 TSEPEPPSEGDMQIISDPPSADNSVKS-EATQPVVDPIAERMAEIVTKDEKSEEKSDGEenqsntivAADLPPLHEKSDA 1142
Cdd:COG5271 419 EADEDASAGETEDESTDVTSAEDDIATdEEADSLADEEEEAEAELDTEEDTESAEEDAD--------GDEATDEDDASDD 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1143 EALLDALEDQTFEPA-DEEMPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTNAPKIPSI 1221
Cdd:COG5271 491 GDEEEAEEDAEAEADsDELTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDE 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1222 PVAPPTTVPTVI-----PTLLSPRQIKSDPRDEPMEDDKPLDES---------------MSSVTNGNSNADQELEALHKA 1281
Cdd:COG5271 571 AEAETEDATENAdadetEESADESEEAEASEDEAAEEEEADDDEadadadgaadeeeteEEAAEDEAAEPETDASEAADE 650
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2089792603 1282 -----IQREAKDDLPIKKEPLKQEKENEPRPEAGDDSTALTTLATAALGSAEQPVKVKTELTDDEKKDIDW 1347
Cdd:COG5271 651 dadaeTEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEA 721
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
968-1102 |
1.97e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 52.73 E-value: 1.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 968 DDEDAGAPETTTQSEAALESLNEDSQEMEQDPAPVAS---TEEPQESSTDPTDEPEPPKPSESEETQAPKIEEAS----S 1040
Cdd:PRK10811 861 AEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEpvvVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDvavaQ 940
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 1041 QETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVDPIAE 1102
Cdd:PRK10811 941 EVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002
|
|
| PRK14131 |
PRK14131 |
N-acetylneuraminate epimerase; |
3-88 |
2.42e-06 |
|
N-acetylneuraminate epimerase;
Pssm-ID: 237617 [Multi-domain] Cd Length: 376 Bit Score: 51.55 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 3 APMLKWKRITNPTGPqprPRHGHRAVAIKDLMVVFGG----GNEG---IVDELHVYNTATNQWFVPLTKGdiPPGCA-AY 74
Cdd:PRK14131 59 APSKGWTKIAAFPGG---PREQAVAAFIDGKLYVFGGigktNSEGspqVFDDVYKYDPKTNSWQKLDTRS--PVGLAgHV 133
|
90
....*....|....
gi 2089792603 75 GFVVDGTRILVFGG 88
Cdd:PRK14131 134 AVSLHNGKAYITGG 147
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
985-1234 |
2.64e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 985 LESLNEDSQEMEQDP-APVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPETQS-SEITTE 1062
Cdd:PHA03247 2540 LEELASDDAGDPPPPlPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPApPSPLPP 2619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1063 STSEPEPPSegdmqiiSDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSdgeeNQSNTIVAADLPPLHEKSDA 1142
Cdd:PHA03247 2620 DTHAPDPPP-------PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRAR----RLGRAAQASSPPQRPRRRAA 2688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1143 EALLDALEDQTFEPADEEMPAEKDNIKKENSPGALPPESIKLEAPEPMITePSPPIVPQATITP-----IIAPPTTNAPK 1217
Cdd:PHA03247 2689 RPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA-PAPPAVPAGPATPggparPARPPTTAGPP 2767
|
250
....*....|....*..
gi 2089792603 1218 IPSIPVAPPTTVPTVIP 1234
Cdd:PHA03247 2768 APAPPAAPAAGPPRRLT 2784
|
|
| Agg_substance |
NF033875 |
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ... |
990-1173 |
6.93e-06 |
|
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.
Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 51.25 E-value: 6.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 990 EDSQEMEQDPAPVASTEEPqeSSTDPTDEPEPPKPSESEE--------TQAPKIEE-ASSQETAESEPATQPETQSSE-- 1058
Cdd:NF033875 39 DNVQAAELDTQPGTTTVQP--DNPDPQSGSETPKTAVSEEatvqkdttSQPTKVEEvASEKNGAEQSSATPNDTTNAQqp 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1059 -------------ITTESTSEP--EP----PSEGDM-QIISDP-----PSADNSVKSEATQP---VVDPIAERMAEIVTK 1110
Cdd:NF033875 117 tvgaeksaqeqpvVSPETTNEPlgQPtevaPAENEAnKSTSIPkefetPDVDKAVDEAKKDPnitVVEKPAEDLGNVSSK 196
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2089792603 1111 DEKSEEKS--DGEENQSNTIV--AADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNIKKENS 1173
Cdd:NF033875 197 DLAAKEKEvdQLQKEQAKKIAqqAAELKAKNEKIAKENAEIAAKNKAEKERYEKEVAEYNKHKNENG 263
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
974-1134 |
8.24e-06 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 50.36 E-value: 8.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 974 APETTTQSEAALEslnedsQEMEQDPAPVASTEEP-QESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQP 1052
Cdd:PRK13108 281 APGALRGSEYVVD------EALEREPAELAAAAVAsAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVAD 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1053 ETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEA----TQPVVDPIAERMAEIVTKDEKSEEKSD-GEENQSNT 1127
Cdd:PRK13108 355 RDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAAsaapEEPAALASEAHDETEPEVPEKAAPIPDpAKPDELAV 434
|
....*..
gi 2089792603 1128 IVAADLP 1134
Cdd:PRK13108 435 AGPGDDP 441
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
954-1256 |
9.19e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 50.54 E-value: 9.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 954 VIPQVDGPCDLLSSDDEDAGAPETTTQSEAALE-----SLNEDSQEMEQDPAPVASTEEPQES--------------STD 1014
Cdd:pfam03154 206 VPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHpqrlpSPHPPLQPMTQPPPPSQVSPQPLPQpslhgqmppmphslQTG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1015 PTDEPEP------PKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSAdnsv 1088
Cdd:pfam03154 286 PSHMQHPvppqpfPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTT---- 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1089 kseatqpvvdPIAERMAEIVTKDEKSEEKSDGEENQSNTIVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNI 1168
Cdd:pfam03154 362 ----------PIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1169 KKENSPGALPPESIKLEAPEPMITEPSPPIVPQ--------ATITPIIAPPTTNAPKIPSI------PVAPPTTVPTVIP 1234
Cdd:pfam03154 432 PVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQhpfvpggpPPITPPSGPPTSTSSAMPGIqppssaSVSSSGPVPAAVS 511
|
330 340
....*....|....*....|..
gi 2089792603 1235 TLLSPRQIKSDPRDEPMEDDKP 1256
Cdd:pfam03154 512 CPLPPVQIKEEALDEAEEPESP 533
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
968-1094 |
1.25e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 48.33 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 968 DDEDAGAPETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEpeppKPSESEETQApkiEEASSQETAESE 1047
Cdd:PRK12495 75 GDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTSATDE----AATDPPATAA---ARDGPTPDPTAQ 147
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2089792603 1048 PATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQ 1094
Cdd:PRK12495 148 PATPDERRSPRQRPPVSGEPPTPSTPDAHVAGTLQAARESLVETLAR 194
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
917-1344 |
1.69e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 49.63 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 917 DEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGnfvipQVDGPCDLLSSDDEDAGAPETTTQSEAALESLNEDSQEME 996
Cdd:COG5271 587 TEESADESEEAEASEDEAAEEEEADDDEADADADG-----AADEEETEEEAAEDEAAEPETDASEAADEDADAETEAEAS 661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 997 QDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQ 1076
Cdd:COG5271 662 ADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEEAESADEE 741
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1077 IISDPPSADNSVKSEATQPV----VDPIAERMAEIVTKDEKSEEKSDGEENQSNTIVAADLPPLHEK----SDAEALLDA 1148
Cdd:COG5271 742 AASLPDEADAEEEAEEAEEAeeddADGLEEALEEEKADAEEAATDEEAEAAAEEKEKVADEDQDTDEdallDEAEADEEE 821
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1149 LEDQTFEPADEEMPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTN-----APKIPSIPV 1223
Cdd:COG5271 822 DLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLDADLAADEHEAEEAQEAETDADAdadagEADSSGESS 901
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1224 APPTTVPTVIPTLLSPRQIKSDPRDEPMEDDKPLDESMSSVTNGNSNADQELEALHKAIQREAKDDLPI-KKEPLKQEKE 1302
Cdd:COG5271 902 AAAEDDDAAEDADSDDGANDEDDDDDAEEERKDAEEDELGAAEDDLDALALDEAGDEESDDAAADDAGDdSLADDDEALA 981
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2089792603 1303 NEPRPEAGDDSTALTTLATAALGSAEQPVKVKTELTDDEKKD 1344
Cdd:COG5271 982 DAADDAEADDSELDASESTGEAEGDEDDDELEDGEAAAGEAT 1023
|
|
| Mpp10 |
COG5384 |
U3 small nucleolar ribonucleoprotein component [Translation, ribosomal structure and ... |
917-1203 |
1.69e-05 |
|
U3 small nucleolar ribonucleoprotein component [Translation, ribosomal structure and biogenesis];
Pssm-ID: 227674 [Multi-domain] Cd Length: 569 Bit Score: 49.30 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 917 DEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGNfvIPQVDGPCDLLSSDDEdagapetttqseAALESLNEDSQEME 996
Cdd:COG5384 43 DEITVDGLDANQVWWQVKLVLDSIDGDLIQGIQELK--DPSLDGSTLNSSSGEE------------SELEEAESVFKEKQ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 997 QDPAPVastEEPQESSTDPTDEPEPPKPSESEETQApkieEASSQETAESEPATQP--------ETQSSEITTESTSEPE 1068
Cdd:COG5384 109 MLSADV---SEIEEQSNDSLSENDEEPSMDDEKTSA----EAAREEFAEEKRIPDPygindkffDLEKFNRDTLAAEDSN 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1069 PPSEGD----MQIISDPPSADNSVKSEATQPVVDP--IAERMAEIVTKDEKSEEKSDGEENQSNT--------IVAADLP 1134
Cdd:COG5384 182 EASEGSededIDYFQDMPSDDEEEEAIYYEDFFDKptKEPVKKHSDVKDPKEDEELDEEEHDSAMdkvkldlfADEEDEP 261
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2089792603 1135 PLHEKSDAEA-LLDALE------DQTFEPADEEMPAEKD-NIKKENSPGALPPESIKLEAPEpmiTEPSPPIVPQAT 1203
Cdd:COG5384 262 NAEGVGEASDkNLSSFEkqqiemDEQIEELEKELVAPKEwKYAGEVSAKKRPKNSLLAEELE---FKQGAKPVPVST 335
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
1019-1296 |
3.78e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 48.23 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1019 PEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEIttestsEPEPPSEGdMQIISDPPSADNSVKS--EATQPV 1096
Cdd:NF033839 281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEV------KPQLEKPK-PEVKPQPEKPKPEVKPqlETPKPE 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1097 VDPIAERmaeivtkdEKSEEKSDGEENQSNTIVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPaEKDNIKKENSPGA 1176
Cdd:NF033839 354 VKPQPEK--------PKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKP-QPEKPKPEVKPQP 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1177 LPPESIKLEAPEpmitEPSPPIVPQATITPIIAPPTTNAPKiPSIPVAPPTTVPTVIPTLLSPRQIKSDPRdepMEDDKP 1256
Cdd:NF033839 425 EKPKPEVKPQPE----KPKPEVKPQPEKPKPEVKPQPETPK-PEVKPQPEKPKPEVKPQPEKPKPDNSKPQ---ADDKKP 496
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2089792603 1257 ldesmsSVTNgnsNADQELEALHKAIQREAKDDLPIKKEP 1296
Cdd:NF033839 497 ------STPN---NLSKDKQPSNQASTNEKATNKPKKSLP 527
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
911-1189 |
5.56e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 48.09 E-value: 5.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 911 ADDVAGDEKTDDSCNGNEAS-VTAALVSQLTAGEPMQVDGEGNFVIPQVDGPCDLLSSDDEDAGAPETTTQSEAALesln 989
Cdd:COG5271 748 EADAEEEAEEAEEAEEDDADgLEEALEEEKADAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDL---- 823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 990 edsqemeqDPAPVASTEEPQEsstdpTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEP 1069
Cdd:COG5271 824 --------DGEDEETADEALE-----DIEAGIAEDDEEDDDAAAAKDVDADLDLDADLAADEHEAEEAQEAETDADADAD 890
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1070 PSEGDMQIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENQSNTIVAADLPPLHEKSDAEALLDAL 1149
Cdd:COG5271 891 AGEADSSGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEERKDAEEDELGAAEDDLDALALDEAGDEESDDAAADDAGD 970
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2089792603 1150 EDQTFEP----ADEEMPAEKDNIKKENSPGALPPESIKLEAPEP 1189
Cdd:COG5271 971 DSLADDDealaDAADDAEADDSELDASESTGEAEGDEDDDELED 1014
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
206-251 |
5.70e-05 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 41.89 E-value: 5.70e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2089792603 206 LVIYGG---MSGSRLGDLWFLDVDSMTWnKPIvhGPTPLPRSLHTATLI 251
Cdd:pfam13415 4 LYIFGGlgfDGQTRLNDLYVYDLDTNTW-TQI--GDLPPPRSGHSATYI 49
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
963-1351 |
6.52e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 47.80 E-value: 6.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 963 DLLSSDDEDAGAPETTTQSE----AALESLNED---------SQEMEQdpapvaSTEEPQESSTDPTDEPEPPKPSESEE 1029
Cdd:PRK14949 427 EAVAEADASAEPADTVEQALddesELLAALNAEqavilsqaqSQGFEA------SSSLDADNSAVPEQIDSTAEQSVVNP 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1030 TQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEPPS---EGDMQIISDPPSADNSVKSEATQPvvdpiaermae 1106
Cdd:PRK14949 501 SVTDTQVDDTSASNNSAADNTVDDNYSAEDTLESNGLDEGDYaqdSAPLDAYQDDYVAFSSESYNALSD----------- 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1107 IVTKDEKSEEKSDGEENQSNTIVAADLPPLHEKSDAEA---LLDAL---EDQTFEPADEEMPAEKDNIKKEnspgalpPE 1180
Cdd:PRK14949 570 DEQHSANVQSAQSAAEAQPSSQSLSPISAVTTAAASLAdddILDAVlaaRDSLLSDLDALSPKEGDGKKSS-------AD 642
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1181 SIKLEAPE--PMITEPSPPIVPQATITPIIAPPTTNAPKIPSiPVAPPTTVPTVIPTLLSPrqiKSDPRDEPMEDDkPLD 1258
Cdd:PRK14949 643 RKPKTPPSraPPASLSKPASSPDASQTSASFDLDPDFELATH-QSVPEAALASGSAPAPPP---VPDPYDRPPWEE-APE 717
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1259 ESMSSVTNGNSNADQELEALHKAIQREAKDDLP-IKKEPLKQEKENEPrpeaGDDSTALTTLATAALGSAEQPVKVKTEL 1337
Cdd:PRK14949 718 VASANDGPNNAAEGNLSESVEDASNSELQAVEQqATHQPQVQAEAQSP----ASTTALTQTSSEVQDTELNLVLLSSGSI 793
|
410 420
....*....|....*....|
gi 2089792603 1338 TDDEkKDIDWY------DVG 1351
Cdd:PRK14949 794 TGHP-LDLHWYklmaslEVG 812
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
967-1085 |
6.55e-05 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 47.28 E-value: 6.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 967 SDDEDAGAPETTTQSEAALESLNEDSQEMEQDPApVASTEEPQESSTDPTDEPEPPKPsESEETQAPKIEEASSQETAES 1046
Cdd:PRK13108 318 VGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQ-VADRDGESTPAVEETSEADIERE-QPGDLAGQAPAAHQVDAEAAS 395
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2089792603 1047 EPATQPETQSSEITTES------TSEPEPPSEGDMQIISDPPSAD 1085
Cdd:PRK13108 396 AAPEEPAALASEAHDETepevpeKAAPIPDPAKPDELAVAGPGDD 440
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
974-1082 |
9.67e-05 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 46.70 E-value: 9.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 974 APETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPE 1053
Cdd:pfam13254 227 SADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEPAAPSKSAEASTEKKEPDTESSPETSSEKSAPS 306
|
90 100
....*....|....*....|....*....
gi 2089792603 1054 TQSSeitTESTSEPEPPSEGDMQIISDPP 1082
Cdd:pfam13254 307 LLSP---VSKASIDKPLSSPDRDPLSPKP 332
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
976-1124 |
1.10e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 46.96 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 976 ETTTQSEAALESLNEDSQ----EMEQDPAPVASTEEPQESSTDPTDEPEP-PKPSESEET--------QAPKIEEASSQE 1042
Cdd:PRK14960 389 AQEITPVSAVQPVEVISQpamvEPEPEPEPEPEPEPEPEPEPEPEPEPEPePEPQPNQDLmvfdpnhhELIGLESAVVQE 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1043 T--AESEP----------ATQPETQSSEIttestsEPEPPSEGDMQIISDPPSADNSVKSE--ATQPVVDPIAERM---- 1104
Cdd:PRK14960 469 TvsVLEEDfipvpeqklvQVQAETQVKQI------EPEPASTAEPIGLFEASSAEFSLAQDtsAYDLVSEPVIEQQslvq 542
|
170 180
....*....|....*....|
gi 2089792603 1105 AEIVTKDEKSEEKSDGEENQ 1124
Cdd:PRK14960 543 AEIVETVAVVKEPNATDNSQ 562
|
|
| Kelch_1 |
pfam01344 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
21-58 |
1.28e-04 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 396078 [Multi-domain] Cd Length: 46 Bit Score: 41.06 E-value: 1.28e-04
10 20 30
....*....|....*....|....*....|....*....
gi 2089792603 21 PRHGHRAVAIKDLMVVFGGGNEG-IVDELHVYNTATNQW 58
Cdd:pfam01344 1 RRSGAGVVVVGGKIYVIGGFDGNqSLNSVEVYDPETNTW 39
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
997-1241 |
1.69e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.61 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 997 QDPAPVASTEEPQeSSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPaTQPETQSSEITTESTSEPEPPSegdmq 1076
Cdd:PTZ00449 589 KDPEEPKKPKRPR-SAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPP-QRPSSPERPEGPKIIKSPKPPK----- 661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1077 iiSDPPSADNSVKSEATQPVVDPiAERMAEIVTKDEKSEEKsdgEENQSNTIVAADLPPLHEKSDAEALLDALEDQTFEP 1156
Cdd:PTZ00449 662 --SPKPPFDPKFKEKFYDDYLDA-AAKSKETKTTVVLDESF---ESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEP 735
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1157 adeemPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTN---APKIPSIPVAPPTTVPTVI 1233
Cdd:PTZ00449 736 -----IGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEpdeAMKRPDSPSEHEDKPPGDH 810
|
....*...
gi 2089792603 1234 PTLLSPRQ 1241
Cdd:PTZ00449 811 PSLPKKRH 818
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
237-336 |
4.28e-04 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 43.99 E-value: 4.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 237 GPTPLPRSLHTATLIGHRMYVFGGWvplvvddvkvatheKEWKCTSTLACLNLETLTWEQLTvdsleeNVPRARAGH-CA 315
Cdd:COG3055 7 PDLPTPRSEAAAALLDGKVYVAGGL--------------SGGSASNSFEVYDPATNTWSELA------PLPGPPRHHaAA 66
|
90 100
....*....|....*....|.
gi 2089792603 316 VGVHSRLYVWSGRDGYRKAWN 336
Cdd:COG3055 67 VAQDGKLYVFGGFTGANPSST 87
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1001-1247 |
4.30e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 4.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1001 PVASTEEPQESSTDPTDEPEPP-----KPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEPPsegdm 1075
Cdd:PHA03247 2861 DVRRRPPSRSPAAKPAAPARPPvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP----- 2935
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1076 QIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENQSNTIVAADLPPLHEKSD------AEAL-LDA 1148
Cdd:PHA03247 2936 PPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLsrvsswASSLaLHE 3015
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1149 LED-------QTFEPADEEMPAEKDNIKKENspgalpPESIKLEAPEPMITEPSPPIvpqaTITPIIAPPTTNAPKIPSI 1221
Cdd:PHA03247 3016 ETDpppvslkQTLWPPDDTEDSDADSLFDSD------SERSDLEALDPLPPEPHDPF----AHEPDPATPEAGARESPSS 3085
|
250 260
....*....|....*....|....*.
gi 2089792603 1222 PVAPPttvPTVIPTLLSPRQIKSDPR 1247
Cdd:PHA03247 3086 QFGPP---PLSANAALSRRYVRSTGR 3108
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
976-1185 |
4.50e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 45.04 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 976 ETTTQSEAALESLNEDSQEmEQDPAPVaSTEEPQESSTDPT---DEPEPPKPSESEETQAPKIEEassqetaESEPATQP 1052
Cdd:PRK14960 370 EPVQQNGQAEVGLNSQAQT-AQEITPV-SAVQPVEVISQPAmvePEPEPEPEPEPEPEPEPEPEP-------EPEPEPEP 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1053 ETQSSE------------ITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDG 1120
Cdd:PRK14960 441 EPQPNQdlmvfdpnhhelIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQIEPEPASTAEPIGLFEASSAEFSL 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2089792603 1121 EENQSNTIVAADlPPLHEKSDAEALLDALEDQTFEPAD----EEMPaeKDNIKkenspgaLPPESIKLE 1185
Cdd:PRK14960 521 AQDTSAYDLVSE-PVIEQQSLVQAEIVETVAVVKEPNAtdnsQLMP--QDILK-------LPSQTLEGE 579
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
999-1280 |
4.85e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 4.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 999 PAPVASTEEPQ-----ESSTDPTDEPEPPK-----PSESEETQAPKIEEASSQETAESEPATQPETQSSEITTEStSEPE 1068
Cdd:PRK10263 375 PAPEGYPQQSQyaqpaVQYNEPLQQPVQPQqpyyaPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQA-EEQQ 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1069 PPSEgdmqiisdpPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENQSNTivaadlPPLHeksdaeallda 1148
Cdd:PRK10263 454 STFA---------PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPAR------PPLY----------- 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1149 ledqTFEPADEEMPAEKDNIKKENSPgalPPESIKLEAP-EPMITEPSPPIVPQATITPIIAP------PTTNAPKIPSI 1221
Cdd:PRK10263 508 ----YFEEVEEKRAREREQLAAWYQP---IPEPVKEPEPiKSSLKAPSVAAVPPVEAAAAVSPlasgvkKATLATGAAAT 580
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1222 PVAP-----------PTTVPTVIPTLLSPRQIKSDPRDE-----------PMEDDKPLDESMSSVTNGNSNADQELEALH 1279
Cdd:PRK10263 581 VAAPvfslansggprPQVKEGIGPQLPRPKRIRVPTRRElasygiklpsqRAAEEKAREAQRNQYDSGDQYNDDEIDAMQ 660
|
.
gi 2089792603 1280 K 1280
Cdd:PRK10263 661 Q 661
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
974-1073 |
5.94e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 44.62 E-value: 5.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 974 APETTTQSEAALESLNEDSQEMEQdPAPVASTEEPQesstdptdePEPPKPSESEETQAPKIEEASSQETAESEPATQPE 1053
Cdd:NF033838 398 AEEEAKRKAAEEDKVKEKPAEQPQ-PAPAPQPEKPA---------PKPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRL 467
|
90 100
....*....|....*....|
gi 2089792603 1054 TQSSEITTESTSEPEPPSEG 1073
Cdd:NF033838 468 TQQQPPKTEKPAQPSTPKTG 487
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
1032-1194 |
6.11e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.20 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1032 APKIEEA----SSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSAD-----NSVKSEATQPVVDPIAE 1102
Cdd:PRK13108 275 APKGREApgalRGSEYVVDEALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAvkaevAEVTDEVAAESVVQVAD 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1103 RMAEIVTKDEKSEEkSDGEENQSNTiVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNIKKENSPGALPPESI 1182
Cdd:PRK13108 355 RDGESTPAVEETSE-ADIEREQPGD-LAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDEL 432
|
170
....*....|..
gi 2089792603 1183 KLEAPEPMITEP 1194
Cdd:PRK13108 433 AVAGPGDDPAEP 444
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
972-1256 |
6.42e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 44.37 E-value: 6.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 972 AGAPETTTQSEAALESLNEDSQEMEQDpAPVASTEEPQESSTDPTDEP------EPPKPSESEETQapkiEEASSQETAE 1045
Cdd:pfam03154 19 SGRKKQTASPDGRASPTNEDLRSSGRN-SPSAASTSSNDSKAESMKKSskkikeEAPSPLKSAKRQ----REKGASDTEE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1046 SEPATQPETQSSEIttestSEPEPPSEGDMQiisdppSADNSVkseatqpvvdpiaermaeiVTKDEKSEEKSDGEENQS 1125
Cdd:pfam03154 94 PERATAKKSKTQEI-----SRPNSPSEGEGE------SSDGRS-------------------VNDEGSSDPKDIDQDNRS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1126 NTivaADLP-PLHEKSDAEALLDALEDQTFEPAdeempaekdnikKENSPGALPPESIKLEAPEPMITEPSPPIVPqaTI 1204
Cdd:pfam03154 144 TS---PSIPsPQDNESDSDSSAQQQILQTQPPV------------LQAQSGAASPPSPPPPGTTQAATAGPTPSAP--SV 206
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 1205 TPIIAPPTTNAPKIPsIPVAPPTTVPTVIPTLLSPRQIKSDPRDEPMEDDKP 1256
Cdd:pfam03154 207 PPQGSPATSQPPNQT-QSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPP 257
|
|
| PHA03151 |
PHA03151 |
hypothetical protein; Provisional |
969-1123 |
7.03e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 177546 [Multi-domain] Cd Length: 259 Bit Score: 43.22 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 969 DEDAGAPETTTQSEaaleslnedSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQapkIEEASSQETAESEP 1048
Cdd:PHA03151 41 DEDDSTPSENTKAE---------SSSIDEDGLLTSSGSDSVFNSTDYESTPEPSKTPGFSDSN---VSDSNNDKDFDFKP 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2089792603 1049 ATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEEN 1123
Cdd:PHA03151 109 QDEDTSSDDSSAPDFITSLVSSDCEARGLSSSEEDGEPYSKQKMSQPLTIDAKTEEITSEEDCCVQEDSSDSEED 183
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
1007-1256 |
8.12e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1007 EPQESSTDPTDEPEPPKPSESEETqAPKIEEASSQETAESEPATQPETQ-------SSEITTESTSEPEPPSEGDMQIIS 1079
Cdd:PLN03209 329 PPKESDAADGPKPVPTKPVTPEAP-SPPIEEEPPQPKAVVPRPLSPYTAyedlkppTSPIPTPPSSSPASSKSVDAVAKP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1080 DPPSADNSVKSEATQPVVDPIAErmaeivtkdeksEEKSdgEENQSNTIVAADLPPlhEKSDAEALLDALEDQTFEPADE 1159
Cdd:PLN03209 408 AEPDVVPSPGSASNVPEVEPAQV------------EAKK--TRPLSPYARYEDLKP--PTSPSPTAPTGVSPSVSSTSSV 471
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1160 EMPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQATIT-PIIAPPTTNapkipsipvAPPTTVPTVIPTLLS 1238
Cdd:PLN03209 472 PAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPvGKVAPSSTN---------EVVKVGNSAPPTALA 542
|
250 260
....*....|....*....|....
gi 2089792603 1239 PRQIKSDPRDEPM------EDDKP 1256
Cdd:PLN03209 543 DEQHHAQPKPRPLspytmyEDLKP 566
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
911-1074 |
8.19e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 911 ADDVAGDEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGNFVIPQVDgpcdllSSDDEDAGAPETTtqSEAALEslNE 990
Cdd:PRK13108 305 AAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVA------DRDGESTPAVEET--SEADIE--RE 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 991 DSQEMEQDPApvastEEPQESSTDPTDEPEPPKPSESEEtqaPKIEEASSQETAESEP-ATQPETQSSEITTESTSEPEP 1069
Cdd:PRK13108 375 QPGDLAGQAP-----AAHQVDAEAASAAPEEPAALASEA---HDETEPEVPEKAAPIPdPAKPDELAVAGPGDDPAEPDG 446
|
....*
gi 2089792603 1070 PSEGD 1074
Cdd:PRK13108 447 IRRQD 451
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
966-1122 |
9.39e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.42 E-value: 9.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 966 SSDDEDAGAPETTTQSEAALESLNEDSQEMEQDPAPV--ASTEEPQESSTDPTD-EPEPPKPSESEETQAPkieEASSQE 1042
Cdd:PHA03169 93 SGSGSESVGSPTPSPSGSAEELASGLSPENTSGSSPEspASHSPPPSPPSHPGPhEPAPPESHNPSPNQQP---SSFLQP 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1043 TAESEPaTQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEE 1122
Cdd:PHA03169 170 SHEDSP-EEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFP 248
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
353-609 |
9.56e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 9.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 353 PAPSRVQLVRASTHSLEVSWTATPSAQYyilqiQKYDMPPATSAFPVAAPPPTTTPALTPATPPTIP-VCSPPVTTAAAT 431
Cdd:PHA03247 2656 PAPGRVSRPRRARRLGRAAQASSPPQRP-----RRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSaTPLPPGPAAARQ 2730
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 432 PMIPAVVTPVRPTVPQ--AAPIRVQTPVQMPPVSKPISSPVVAKPASPMTPrgnliRIRSPLVTSASIVASPVPASTIAA 509
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAgpATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR-----RLTRPAVASLSESRESLPSPWDPA 2805
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 510 TTIEQPTVVNPATTVSQSPSAMSGiAALAAAAAATPKISMNNIPMISQAGtntirmkSVQPGQQIRFAAP-GATVLRTAS 588
Cdd:PHA03247 2806 DPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPPSLPLGG-------SVAPGGDVRRRPPsRSPAAKPAA 2877
|
250 260
....*....|....*....|.
gi 2089792603 589 PQQSKQIILQKPGQNITGQPQ 609
Cdd:PHA03247 2878 PARPPVRRLARPAVSRSTESF 2898
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1389-1418 |
1.03e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.79 E-value: 1.03e-03
10 20 30
....*....|....*....|....*....|
gi 2089792603 1389 LESGTAYKFRVAAVNSCGQSAWSEVSAFKT 1418
Cdd:cd00063 64 LKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
135-196 |
1.24e-03 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 38.04 E-value: 1.24e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 135 GNKVFLFGGLANDSEDpknniprYLNDLYTLELlpnGATAWEvpqTHGHAPPPRESHTGVAY 196
Cdd:pfam13415 1 GDKLYIFGGLGFDGQT-------RLNDLYVYDL---DTNTWT---QIGDLPPPRSGHSATYI 49
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
1162-1287 |
1.31e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1162 PAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVPQatitPIIAPPTTNAPK-----IPSIPVAPPTTVPTVIPTL 1236
Cdd:PRK14950 364 PAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPV----RETATPPPVPPRpvappVPHTPESAPKLTRAAIPVD 439
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2089792603 1237 LSPrqiKSDPRDEPMEDDKPLDESMSSVtngnsnadQELEALHKAIQREAK 1287
Cdd:PRK14950 440 EKP---KYTPPAPPKEEEKALIADGDVL--------EQLEAIWKQILRDVP 479
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
986-1208 |
1.55e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.14 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 986 ESLNEDSQEMEQDPAPVASTEEPQESST-DPTDEPEPPKPSESEETQAPKIEEASSQETAESEPA---TQPETQSSEITT 1061
Cdd:PTZ00449 705 ETLPETPGTPFTTPRPLPPKLPRDEEFPfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLpdiLAEEFKEEDIHA 784
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1062 EsTSEPEPPSEGdmqiiSDPPSaDNSVKSEATQPVVdPIAERMAE--IVTKDEKSEEKSDGEENQSNTIVAA-------D 1132
Cdd:PTZ00449 785 E-TGEPDEAMKR-----PDSPS-EHEDKPPGDHPSL-PKKRHRLDglALSTTDLESDAGRIAKDASGKIVKLkrsksfdD 856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1133 LPPLHEKSD--AEALLDALEDQTFEPADEEMPAEKDNIKKE---NSPGALPPESikleapePMITEPSPPIVPQATITPI 1207
Cdd:PTZ00449 857 LTTVEEAEEmgAEARKIVVDDDGTEADDEDTHPPEEKHKSEvrrRRPPKKPSKP-------KKPSKPKKPKKPDSAFIPS 929
|
.
gi 2089792603 1208 I 1208
Cdd:PTZ00449 930 I 930
|
|
| Kelch_4 |
pfam13418 |
Galactose oxidase, central domain; |
21-58 |
1.56e-03 |
|
Galactose oxidase, central domain;
Pssm-ID: 433191 [Multi-domain] Cd Length: 49 Bit Score: 37.98 E-value: 1.56e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2089792603 21 PRHGHRAVAIKDLMV-VFGG--GNEGIVDELHVYNTATNQW 58
Cdd:pfam13418 1 PRAYHTSTSIPDDTIyLFGGegEDGTLLSDLWVFDLSTNEW 41
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1424-1535 |
1.68e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.40 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1424 PGAPSAIKISK-SAEGAQLSWEPPPSHLGPILEYSVYLavrsasaVPNSTGEATTVATTPtqlafirvycGPTNACSVPN 1502
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDGGPITGYVVEY-------REKGSGDWKEVEVTP----------GSETSYTLTG 63
|
90 100 110
....*....|....*....|....*....|...
gi 2089792603 1503 ssLSAAHMdvttkpaIIFRIAARNDKGYGPATQ 1535
Cdd:cd00063 64 --LKPGTE-------YEFRVRAVNGGGESPPSE 87
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
972-1105 |
1.69e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 972 AGAPETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQ 1051
Cdd:PRK07994 378 AASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNSALE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2089792603 1052 PETQSSEIttESTSEPEPPSEGDMQIISDPPSAdnsvksEATQPVVDPIAERMA 1105
Cdd:PRK07994 458 RLASVRPA--PSALEKAPAKKEAYRWKATNPVE------VKKEPVATPKALKKA 503
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
967-1073 |
1.72e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 42.65 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 967 SDDEDAGaPETTTQSEAALESLNEDSQEmEQDPApvasTEEPQESSTDPtdePEPPKPSESEETQAPKIEEASSQETaES 1046
Cdd:PHA03169 150 APPESHN-PSPNQQPSSFLQPSHEDSPE-EPEPP----TSEPEPDSPGP---PQSETPTSSPPPQSPPDEPGEPQSP-TP 219
|
90 100 110
....*....|....*....|....*....|
gi 2089792603 1047 EPATQPETQ---SSEITTESTSEPEPPSEG 1073
Cdd:PHA03169 220 QQAPSPNTQqavEHEDEPTEPEREGPPFPG 249
|
|
| Kelch_5 |
pfam13854 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
19-56 |
2.54e-03 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 433528 [Multi-domain] Cd Length: 41 Bit Score: 37.16 E-value: 2.54e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2089792603 19 PRPRHGHRAVAIKDLMVVFGG---GNEGIVDELHVYNTATN 56
Cdd:pfam13854 1 PVPRYGHCAVTVGDYIYLYGGytgGEGQPSDDVYVLSLPTF 41
|
|
| Kelch_5 |
pfam13854 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
68-103 |
2.57e-03 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 433528 [Multi-domain] Cd Length: 41 Bit Score: 37.16 E-value: 2.57e-03
10 20 30
....*....|....*....|....*....|....*..
gi 2089792603 68 PPGCAAYGFVVDGTRILVFGGMV-EYGKYSNELYELQ 103
Cdd:pfam13854 1 PVPRYGHCAVTVGDYIYLYGGYTgGEGQPSDDVYVLS 37
|
|
| Sec16_N |
pfam12935 |
Vesicle coat trafficking protein Sec16 N-terminus; Sec16 is a multi-domain vesicle coat ... |
968-1138 |
2.59e-03 |
|
Vesicle coat trafficking protein Sec16 N-terminus; Sec16 is a multi-domain vesicle coat protein. The overall function of Sec16 is in mediating the movement of protein-cargo between the organelles of the secretory pathway. Over-expression of truncated mutants of only the N-terminus are lethal, and this portion does not appear to be essential for function so may act as a stabilising region.
Pssm-ID: 315590 [Multi-domain] Cd Length: 236 Bit Score: 41.29 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 968 DDEDAGAPETTTQSEAALESLNEDSQEMEQDpapvASTEEPQESstDPTDEPEPPKPSESEETQAPKIEEASSQETAESE 1047
Cdd:pfam12935 46 DNGDDTPVENRSKQESQIDSVFAGDEEDDEA----DFFSSNQES--ESKKEGEPNDHLTRKSTSQVLDSLKDPPDSPESD 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1048 --PATQPETQSSEITTESTSEPEPPSEGDMqiiSDPPSADNSVKSEATQPVVDPIAER-MAE------IVTKDEKSEEKS 1118
Cdd:pfam12935 120 dsPAAEDFDEILAAAATEKQQEKSPSEEDL---AARWQAELSDEVPEPMPMEDDLAERwQAFldddddLLLDDETLDANS 196
|
170 180
....*....|....*....|
gi 2089792603 1119 DGEENQSNTIVAADLPPLHE 1138
Cdd:pfam12935 197 APEEEPNGPTNDSTANSLSS 216
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
963-1274 |
3.37e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 963 DLLSSDDEDAG--APETTTQSEAALESLNEDSQEMEQDPAP-VASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEAS 1039
Cdd:PHA03307 9 DLIEAAAEGGEffPRPPATPGDAADDLLSGSQGQLVSDSAElAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1040 SQETAESEPATQPETQSSEITTESTSEPEPPSEgdmQIISDPPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSD 1119
Cdd:PHA03307 89 TWSLSTLAPASPAREGSPTPPGPSSPDPPPPTP---PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1120 GEENQSNTIVAA------------------DLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNIKKENSPGALPPES 1181
Cdd:PHA03307 166 AASSRQAALPLSspeetarapssppaepppSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1182 IKLEAPEPMITEPSPPivPQATITPIIAPPTTNAPKIPSIPVAPPTTVPTviptlLSPRQIKSDPRDEPMEDDKPLDESM 1261
Cdd:PHA03307 246 GCGWGPENECPLPRPA--PITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSPSPSPSSPGSGPAPSSPRASSSS 318
|
330
....*....|...
gi 2089792603 1262 SSVTNGNSNADQE 1274
Cdd:PHA03307 319 SSSRESSSSSTSS 331
|
|
| rad2 |
TIGR00600 |
DNA excision repair protein (rad2); All proteins in this family for which functions are known ... |
1034-1276 |
3.78e-03 |
|
DNA excision repair protein (rad2); All proteins in this family for which functions are known are flap endonucleases that generate the 3' incision next to DNA damage as part of nucleotide excision repair. This family is related to many other flap endonuclease families including the fen1 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273166 [Multi-domain] Cd Length: 1034 Bit Score: 42.19 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1034 KIEEASSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVdpiaermaEIVTKDEK 1113
Cdd:TIGR00600 336 KPESESIVEAEPPSPRTLLAKQAAMSESSSEDSDESEWERQELKRNNVAFVDDGSLSPRTLQAI--------GQALDDDE 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1114 SEEKSDGEENQSN------TIVAADLPplhEKSDAEALLDALEDQTFE--PADEEMPAEKDNIKKENSP--------GAL 1177
Cdd:TIGR00600 408 DKKVSASSDDQASpskktkMLLISRIE---VEDDDLDYLDQGEGIPLMaaLQLSSVNSKPEAVASTKIArevtssghEAV 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1178 PPESIKLEAP-EPMITEPSP---PIVPQATITPIIAPPTTNAPKIPS---IPVAPPTTVPTviptllSPRQIKSDPRDEP 1250
Cdd:TIGR00600 485 PKAVQSLLLGaTNDSPIPSEftiLDRKSELSIERTVKPVSSEFGLPSqreDKLAIPTEGTQ------NLQGISDHPEQFE 558
|
250 260
....*....|....*....|....*.
gi 2089792603 1251 MEDDKPLDESmssvTNGNSNADQELE 1276
Cdd:TIGR00600 559 FQNELSPLET----KNNESNLSSDAE 580
|
|
| Kelch_1 |
pfam01344 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
242-298 |
4.20e-03 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 396078 [Multi-domain] Cd Length: 46 Bit Score: 36.82 E-value: 4.20e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2089792603 242 PRSLHTATLIGHRMYVFGGWVplvvddvkvathekEWKCTSTLACLNLETLTWEQLT 298
Cdd:pfam01344 1 RRSGAGVVVVGGKIYVIGGFD--------------GNQSLNSVEVYDPETNTWSKLP 43
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
817-1092 |
4.54e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.99 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 817 DPLAAGKPVTLQMSGGLGAKTVT---------LMPTSSSIVTTSADSIDTTKMMFVPQKQ-PSASLASTsdgPATTDAAL 886
Cdd:PRK10263 308 DPLLNGAPITEPVAVAAAATTATqswaapvepVTQTPPVASVDVPPAQPTVAWQPVPGPQtGEPVIAPA---PEGYPQQS 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 887 AALAAEAGLIDPVQEPSgglsfmvaddvagdektdDSCNGNEASVTAALVSQLTAGEPMQVDGEGNFVIPQVDGPCDLLS 966
Cdd:PRK10263 385 QYAQPAVQYNEPLQQPV------------------QPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNA 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 967 SDDEDagaPETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPS--------ESEETQAPKIEEA 1038
Cdd:PRK10263 447 WQAEE---QQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPArpplyyfeEVEEKRAREREQL 523
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2089792603 1039 SSQETAESEPATQPetqssEITTESTSEPEPPSEGDMQIISDPPSADNSVKSEA 1092
Cdd:PRK10263 524 AAWYQPIPEPVKEP-----EPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKAT 572
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
970-1188 |
5.78e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.52 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 970 EDAGAPETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQApKIEEASSQETAESEPA 1049
Cdd:TIGR00927 674 ETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGE-EGEEVEDEGEGEAEGK 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1050 TQPETQSSEITTESTSEPEPPSEGDMQIISDPPSADNSVKSE--ATQPVVDPIAERMAEIVTKDEKSEEKSDGE------ 1121
Cdd:TIGR00927 753 HEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDegAEGKVEHEGETEAGEKDEHEGQSETQADDTevkdet 832
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2089792603 1122 -ENQSNTIVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNIKKENSPGALPPESIKLEAPE 1188
Cdd:TIGR00927 833 gEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPE 900
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
985-1085 |
5.94e-03 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 41.32 E-value: 5.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 985 LESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQApkieEASSQETAESEPATQPETQSSE-ITTES 1063
Cdd:COG4547 207 LAEELGEDEDEEDEDDEDDSGEQEEDEEDGEDEDEESDEGAEAEDAEA----SGDDAEEGESEAAEAESDEMAEeAEGED 282
|
90 100
....*....|....*....|..
gi 2089792603 1064 TSEPEPPSEGDMQIISDPPSAD 1085
Cdd:COG4547 283 SEEPGEPWRPNAPPPDDPADPD 304
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
419-641 |
6.25e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.44 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 419 PVCSPPVTTAAATPMIPAVVTPV-RPTVPQAAPIRVQTPVQMPpvSKPISSPVVAKpaspMTPRGNLIRIRSPLVTSASI 497
Cdd:pfam05109 544 PTSAVTTPTPNATSPTPAVTTPTpNATIPTLGKTSPTSAVTTP--TPNATSPTVGE----TSPQANTTNHTLGGTSSTPV 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 498 VASPVPASTIAATTIEQPTVVNPATTVSQSPSAMSGIAALAAAAAATPKISM---------NNIPMISQAGTNTIRMKSV 568
Cdd:pfam05109 618 VTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLltsahptggENITQVTPASTSTHHVSTS 697
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2089792603 569 QPGQQirfaaPGATVLRTASPQQSKQiilQKPGQ-NITG--QPQIVHLVKTTQGMMATVPKMSLIPGKNVQGAGGK 641
Cdd:pfam05109 698 SPAPR-----PGTTSQASGPGNSSTS---TKPGEvNVTKgtPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGK 765
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
991-1233 |
6.81e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.18 E-value: 6.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 991 DSQEMEQDPAPVASTEEPQESSTDPTDEPEPPKPSESEETQAPKIEEASSQETAESEPATQPE--------TQSSEITTE 1062
Cdd:PRK10811 655 ESQQAEVTEKARTQDEQQQAPRRERQRRRNDEKRQAQQEAKALNVEEQSVQETEQEERVQQVQprrkqrqlNQKVRIEQS 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1063 STSEPEPPSEGDMQIISDPPSADNSVKSEATQPVVDPIAERMAEivtkdekSEEKSDGEENQSNTivaadLP------PL 1136
Cdd:PRK10811 735 VAEEAVAPVVEETVAAEPVVQEVPAPRTELVKVPLPVVAQTAPE-------QDEENNAENRDNNG-----MPrrsrrsPR 802
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1137 HEK---------SDAEALLDALEDQTFEPADEEM------------PAEKDNIKKENSPGALPPESIKLEAPEPMITEPS 1195
Cdd:PRK10811 803 HLRvsgqrrrryRDERYPTQSPMPLTVACASPEMasgkvwirypvvRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPV 882
|
250 260 270
....*....|....*....|....*....|....*...
gi 2089792603 1196 PPIVPQATITPIIAPPTTNAPKIPSIPVAPPTTVPTVI 1233
Cdd:PRK10811 883 VSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVI 920
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
1011-1310 |
6.84e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 6.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1011 SSTDPTDEPEPPKPsESEETQAPkieeasSQETAESEPATQPETQSSEI--TTESTSEPEPPSEGDMQIISDPPSADNSV 1088
Cdd:NF033839 151 SSSGSSTKPETPQP-ENPEHQKP------TTPAPDTKPSPQPEGKKPSVpdINQEKEKAKLAVATYMSKILDDIQKHHLQ 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1089 KSEATQPVvdpiaermAEIVTKDEKSEEKSDGEENqsntiVAADLPPLHEKSDAEALLDALEDQTFEPADEEMPAEKDNI 1168
Cdd:NF033839 224 KEKHRQIV--------ALIKELDELKKQALSEIDN-----VNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNK 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1169 KKEN-SPGALPPESIKLEAPEPMITEPSPPIVPQATITPIIAPPTTNAPKiPSIPVAPPTTVPTVIPTLLSPRqiksdPR 1247
Cdd:NF033839 291 KPSApKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPK-PEVKPQLETPKPEVKPQPEKPK-----PE 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2089792603 1248 DEPmEDDKPLDESMSSVTNGNSNADQELEALHKAIQREAKDDLP-IKKEPLKQEKENEPRPEAG 1310
Cdd:NF033839 365 VKP-QPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKP 427
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1385-1483 |
7.47e-03 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 40.76 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1385 TKIPLESGTAYKFRVAAVNSCGQSAWS-EVSAFKTCLPgfPGAPSAIK-ISKSAEGAQLSWEPPPSHlgPILEYSVYlav 1462
Cdd:COG3401 195 GGGDIEPGTTYYYRVAATDTGGESAPSnEVSVTTPTTP--PSAPTGLTaTADTPGSVTLSWDPVTES--DATGYRVY--- 267
|
90 100
....*....|....*....|.
gi 2089792603 1463 RSASavpnSTGEATTVATTPT 1483
Cdd:COG3401 268 RSNS----GDGPFTKVATVTT 284
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
970-1234 |
8.93e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.79 E-value: 8.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 970 EDAGAPETTTQSEAALESlnedSQEMEQDPAPVASTEEPQE-SSTDPTDEPEPPKPS-------------------ESEE 1029
Cdd:PRK10811 745 EETVAAEPVVQEVPAPRT----ELVKVPLPVVAQTAPEQDEeNNAENRDNNGMPRRSrrsprhlrvsgqrrrryrdERYP 820
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1030 TQAPKIEE--ASSQETAE-----SEPATQPETQSSEITTESTSEPEPPsegdmqIISDPPSADNSVKSEATQPVVDPIAE 1102
Cdd:PRK10811 821 TQSPMPLTvaCASPEMASgkvwiRYPVVRPQDVQVEEQREAEEVQVQP------VVAEVPVAAAVEPVVSAPVVEAVAEV 894
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2089792603 1103 RMAEIVTKDEKSEEKSDGEENQSNTIVAadlpPLHEKSdaealldALEDQTFEPADEEMPAEkdnikkenSPGALPPESI 1182
Cdd:PRK10811 895 VEEPVVVAEPQPEEVVVVETTHPEVIAA----PVTEQP-------QVITESDVAVAQEVAEH--------AEPVVEPQDE 955
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2089792603 1183 KLEAPEPMITEPSPPIVPQATITPIIAPPTTNAPKIPSIPVAPPTTVPTVIP 1234
Cdd:PRK10811 956 TADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVP 1007
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
82-134 |
9.91e-03 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 35.73 E-value: 9.91e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2089792603 82 RILVFGGMVEYG-KYSNELYELQASRWEWKRLKPKHPkheqppcPRLGHSFTLI 134
Cdd:pfam13415 3 KLYIFGGLGFDGqTRLNDLYVYDLDTNTWTQIGDLPP-------PRSGHSATYI 49
|
|
| |
