|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-574 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 707.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 2 FSICSLSFFSLFFSSTLLFILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 82 EKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 162 FGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLY 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 242 NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLK 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 322 DTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSM 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 402 SGDNNFYSSFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFPIPYMISLPYYLKFLTMFVVLLGAYLGYLISEMNLSRV 481
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 482 LFSLSGLPFVSFVGSMWFMPFLSTKFISYLPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLT 561
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 2088662732 562 FIFWMLFLVIYFY 574
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
24-573 |
8.36e-175 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 506.49 E-value: 8.36e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 24 IYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLI 103
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 104 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyIYYYNFISDSfeMKLI 183
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL--GSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 184 TILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DLYNFGWFLLIIGCMTMFMAGLGA 262
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 263 NFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVC 342
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 343 FNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISF 422
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 423 GMIFLLIVAVFGGSFLSWLIFPIPYMISLPYYLKFLTMFVVLLGAYLGYLISEMNlsrvLFSLSGLPFVSFVGSMWFMPF 502
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKN----FFLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2088662732 503 LSTKFISYLPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLTFIFWMLFLVIYF 573
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
21-573 |
9.84e-175 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 506.30 E-value: 9.84e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 21 ILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMG 100
Cdd:MTH00151 20 PLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 101 FLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYyynfISDSFEM 180
Cdd:MTH00151 100 LLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILS----MWDFKLS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 181 KLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYN-FGWFLLIIGCMTMFMAG 259
Cdd:MTH00151 176 GWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 260 LGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLT 339
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLT 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 340 SVCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYY 419
Cdd:MTH00151 336 SGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFY 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 420 ISFGMIFLLIVAVFGGSFLSWLIFPIPYMISLPYYLKFLTMFVVLLGAYLGYLISEMNLSRVLFSLSGlpfvSFVGSMWF 499
Cdd:MTH00151 416 VSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS----FFFSSMWF 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088662732 500 MPFLSTKFISYLPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLTFIFWMLFLVIYF 573
Cdd:MTH00151 492 LSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-573 |
1.39e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 493.51 E-value: 1.39e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 1 MFSICSLSFFSLFFSSTLLFILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMS 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 81 GEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 161 NFGSWNYIYYYnfisDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD- 239
Cdd:MTH00207 163 NQGHWSITNMW----QTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 240 LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHN 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 320 LKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 400 SMSGDNNFYSSFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFPIPYMISLPYYLKFLTMFVVLLGAYLGYLISEMNLS 479
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNIT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 480 RVLFSLSGLPFVSFVGSMWFMPFLSTKFISYLPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYL 559
Cdd:MTH00207 479 KTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL 558
|
570
....*....|....
gi 2088662732 560 LTFIFWMLFLVIYF 573
Cdd:MTH00207 559 MMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
32-573 |
3.22e-118 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 362.35 E-value: 3.22e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 32 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISI 111
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 112 LLGWDGLGLVSYCLVIYYQNVKSYSAGMLTAL-SNRIGDVAILISIAWML-NFGSWNYIYYYNFisdSFEMKLITILIIL 189
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 190 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDL-YNFGWFLLIIGCMTMFMAGLGANFEFDL 268
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNnQLILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 269 KKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSL 348
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 349 SLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLL 428
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 429 IVAVFGGSFLSWLIFPIPYMI-SLPYYLKFLTMFVVLLGAYLGyliseMNLSRVLFSLSGLPFVSFVGSMWFMPFLSTKF 507
Cdd:MTH00211 453 LGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLG-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 508 ISYLPLKYG-YLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLTFIFWMLFLVIYF 573
Cdd:MTH00211 528 LPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
37-473 |
1.75e-99 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 314.40 E-value: 1.75e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 37 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 116
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 117 GLGLVSYCLVIYYQNVKSYSAGMLTA-LSNRIGDVAILISIAWMLN-FGSWNYIYYYNFISDSFE---MKLITILIILAA 191
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFSELLAAAPTILSsplLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 192 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKK 270
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 271 IIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSVCFNVSSLSL 350
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 351 CGLPFLAGFYSKDLILE-LVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLI 429
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2088662732 430 VAVFGGSFLSWL---------IFPIPYMISLPYYLKFLTMFVVLLGAYLGYLI 473
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
21-571 |
8.61e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 310.36 E-value: 8.61e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 21 ILGIYYLLFD----YSVFVEWelFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFI 96
Cdd:MTH00208 71 INLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 97 LSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTA-LSNRIGDVAILISIAW-MLNFGSWNY--IYYYN 172
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLneILSLN 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 173 FISDSFeMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDlyNFGWFL---LI 249
Cdd:MTH00208 229 NSNSFL-INILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 250 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFM 329
Cdd:MTH00208 306 LGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKM 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 330 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYS 409
Cdd:MTH00208 386 GGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSP 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 410 SFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFPIPyMISLPYYLKFLTMFVVLLGAYLGYLISeMNLSRVLFSLSGLP 489
Cdd:MTH00208 466 LSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL-LSLSSNPINSNFFS 543
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 490 FVSFvgsMWFMPFLSTKFISYLPLKYG-YLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLTFIFWMLF 568
Cdd:MTH00208 544 FLSN---QWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLL 620
|
...
gi 2088662732 569 LVI 571
Cdd:MTH00208 621 ILT 623
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
37-477 |
6.89e-96 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 304.78 E-value: 6.89e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 37 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 116
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 117 GLGLVSYCLVIYYQN-VKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNyiyyynfISDSFEMKLITIL----IILA 190
Cdd:MTH00004 146 GVGIMSFLLIGWWSGrAEANTAALQAIIYNRIGDIGLILSMAWLaMTLNTWE-------IQQLFSPTQTPTLpllgLILA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 191 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFL-LIIGCMTMFMAGLGANFEFDLK 269
Cdd:MTH00004 219 ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 270 KIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLS 349
Cdd:MTH00004 299 KIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLA 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 350 LCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLI 429
Cdd:MTH00004 379 LMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLAL 458
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2088662732 430 VAVFGGSFLSWLIFPI-PYMISLPYYLKFLTMFVVLLGAYLGYLISEMN 477
Cdd:MTH00004 459 GSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMT 507
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
32-573 |
6.06e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 294.12 E-value: 6.06e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 32 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISI 111
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 112 LLGWDGLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYYNFISDSFemkLITILIIL 189
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQIFLLNDNST---LPLLGLIL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 190 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFL-LIIGCMTMFMAGLGANFEFDL 268
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 269 KKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSL 348
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 349 SLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLL 428
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 429 IVAVFGGSFLSWLIFPIPYMI-SLPYYLKFLTMFVVLLGAYLGYLISEMNLSRVLFSLSglpfVSFVGSMWFMPFLSTKF 507
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM----HSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 508 ISYLPLKYGY-LSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLTFIFWMLFLVIYF 573
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-473 |
6.12e-87 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 281.48 E-value: 6.12e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 37 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 117 GLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYNFISDSFEMKLITILIILAAM 192
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 193 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYN-FGWFLLIIGCMTMFMAGLGANFEFDLKKI 271
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPtALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 272 IALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 351
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 352 GLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLIVA 431
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2088662732 432 VFGGSFLSWLIFPIPYMI-----------SLPYYLKFLTMFVVLLGAYLGYLI 473
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
49-473 |
1.17e-86 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 281.28 E-value: 1.17e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKSYSAGMLTA-LSNRIGDVAILISIAWML-NFGSWNY----IYYYNFISDSFEM-KLITILIILAAMTKSAQIPFS 201
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdevfAAAPQFFGLGWSAlTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 202 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLY-NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 281 GLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFY 360
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 361 SKDLILElVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNnfyssfcfDD-------SGYYISFGMIFLLIVAVF 433
Cdd:PRK06590 398 SKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKE--------KEkihhpheSPAVMTLPLIVLAVLSVF 468
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2088662732 434 GG-----SFLSWLIFP-----IPYMISLPYYLKFLTMFVVLLGAYLGYLI 473
Cdd:PRK06590 469 AGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
49-466 |
4.79e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 279.05 E-value: 4.79e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 128 YYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYynFISDSFEMKLITILIILAAMTKSAQIPFSSWLPA 206
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPS 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFL-LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 285
Cdd:MTH00108 236 AMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLtLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 286 ILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 365
Cdd:MTH00108 316 TIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 366 LELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFP- 444
Cdd:MTH00108 396 IEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPt 475
|
410 420
....*....|....*....|...
gi 2088662732 445 -IPYMiSLPYYLKFLTMFVVLLG 466
Cdd:MTH00108 476 tIPQM-TMPLYLKLTALAVTILG 497
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
54-401 |
1.33e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 272.86 E-value: 1.33e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 54 DWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNV 132
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 133 KSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNyIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAP 211
Cdd:MTH00137 167 DANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 212 TPVSALVHSSTLVTAGVYLLIRFSPMLDlyNFGWFLLIIGCM----TMFMA--GLGANfefDLKKIIALSTLSQLGLMMS 285
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLME--NNQTALTTCLCLgaltTLFTAtcALTQN---DIKKIVAFSTSSQLGLMMV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 286 ILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 365
Cdd:MTH00137 321 TIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAI 400
|
330 340 350
....*....|....*....|....*....|....*..
gi 2088662732 366 LELVCFSWVNFLIFFLYFFSTGLTAAYSFRL-FYYSM 401
Cdd:MTH00137 401 IEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
37-543 |
1.84e-77 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 256.54 E-value: 1.84e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 37 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 116
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 117 GLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYNFIS--DSFEMKLITILIILAAM 192
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 193 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKI 271
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 272 IALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 351
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 352 GLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYS-MSGDNNFYSSFCF-DDSGYYISFGMIFLLI 429
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHlHEGDWNLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 430 VAVFGGSFLSWLI--FPIPYMISLPYYLKFLTMFVVLLGAYLGYLI--SEMNLSRVLFSLSGLPFVSFVGSMWFMPFLST 505
Cdd:MTH00020 462 GSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILyfYSSKTFRVPFSFIGRNSYTFLGSAWQFNYILN 541
|
490 500 510
....*....|....*....|....*....|....*....
gi 2088662732 506 KFISYLPLKYGYL-SSKSFDYGWGELFGGQGIYSLFIYL 543
Cdd:MTH00020 542 YFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIIL 580
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
51-572 |
5.72e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 249.92 E-value: 5.72e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 51 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYY 129
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 QNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYNFISDSFEMKLITI---LIILAAMTKSAQIPFSSWLP 205
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINKESLTIiclLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 284
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 285 SILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDL 364
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 365 ILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCF--DDSGYYISFGMIFLLIVAVFGGS-----F 437
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIgvHESSWNITFPLLLLAFGSIFVGYlgkevV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 438 LSWLIFPIpymisLPYYLKFLTMFVVLLGAYLGYLI------SEMNLSRVLFSLSGLPFVSFVGSMWFMPFLSTKFISYL 511
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2088662732 512 PLKYGYL-SSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWYDSNFKIYLLT-FIFWMLFLVIY 572
Cdd:MTH00210 551 IWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALImIIFTTLFISGA 613
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
34-517 |
3.58e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 219.02 E-value: 3.58e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 34 FVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILL 113
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 114 GWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILIsiawmlnFGSWNYIYYYNFISDSFEMKLITILIILAAMT 193
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 194 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 273
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 274 LSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGL 353
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 354 PFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFyysMSGDNNFYSSFCFDDSGYYISFGMIFLLIVAVF 433
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLW---KSFFLSFSKVVNVYSSSVLMNFLSLMLVFFSVF 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 434 ggsFLSWLIFPIPYMISLPYYLKFltmFVVLLGAYLGYLISEMNLSRVLFSLSGLPFVSFVGSMWFMPFLSTKFISYLPL 513
Cdd:MTH00095 414 ---FLWWLNFNLLNLPSLFLYLDF---YVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLN 487
|
....
gi 2088662732 514 KYGY 517
Cdd:MTH00095 488 KFGY 491
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
49-404 |
8.81e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 216.04 E-value: 8.81e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKSYSAGMLTA-LSNRIGDVAILISIA---WMLnfGSWNYIYYYNFISDSFE--------MKLITILIILAAMTKSA 196
Cdd:PRK07376 165 WYDRKGAADAAQKAfVVNRVGDFGLLLGILglfWAT--GSFDFDGIADRLSELVSsgavsgwlALLLCILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 197 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALS 275
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 276 TLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDT--------QDIRFMGSIVYFMPLTSVCFNVSS 347
Cdd:PRK07376 323 TISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLIGC 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 348 LSLCGLPFLAGFYSKDLILELVCFSwvNFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 404
Cdd:PRK07376 403 LAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
51-572 |
3.29e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 205.96 E-value: 3.29e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 51 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 131 N-VKSYSAGMLTALSNRIGDVAILISIAWM------LNFGSWNYIYYYNFISDSFEMK------------LITILIILAA 191
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRGYYGggayesplapfaIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 192 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKK 270
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 271 IIALSTLSQLGLMMSILSM-GYSKLAFFHLLTHALFKALLFMCAGSMIHNLK-DTQDIRFMGSIVYFMPLTSVCFNVSSL 348
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 349 SLCGLPFLAGFYSKDLILELVCF------------------------------------SWVNFLIFFLYFFSTGLTAAY 392
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 393 SFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFPI-----------PYMISLPYYLKFLTMF 461
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMG 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 462 VVLLGAYLGYLISEMNLSRVLFSLSGLPFVSFVGSMWFMPFLSTKFISYLPLKYGYLSS-KSFDYGWGELFGGQGIYSLF 540
Cdd:MTH00032 556 LCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIA 635
|
570 580 590
....*....|....*....|....*....|...
gi 2088662732 541 IYLIGYIQGWYDSNFKIYLLTFI-FWMLFLVIY 572
Cdd:MTH00032 636 LRVSQFISNLQSGVISRYALVLLsFTIIFLALW 668
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
3.02e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.59 E-value: 3.02e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 105 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYNFISDSFE 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 180 MKLITILIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDLYNFGW--FLLIIGCMTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 257 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIV 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2088662732 334 YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-399 |
2.85e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 179.19 E-value: 2.85e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 QNVKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYNFIS--DSFEMKLITILIILAAMTKSAQIPFSSWLPA 206
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 207 AMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 282 LMMSILSMGYSKL---AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAG 358
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2088662732 359 FYSKDLILELVcFSWVNFLIFFLYFFSTGLTAAYSFRLFYY 399
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-395 |
1.53e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 181.54 E-value: 1.53e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 QNVKSYSAGMLTALS-------NRIGDVAILISIAwmlnfGSWNyiyyynfISDSFEMK----------LITILIILAAM 192
Cdd:PRK12648 151 HHRADARRGARMALTvtgagglALLAGVLLLGHIV-----GSYD-------LDVVLAAGdlirahplypPALVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 193 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---DLynfgWFLLI--IGCMTMFMAGLGANFEFD 267
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagtEE----WFWIVggAGLITLLLGAYFALFQHD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 268 LKKIIALSTLSQLGLMMSILSMGySKLA----FFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCF 343
Cdd:PRK12648 295 LKGLLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLA 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2088662732 344 NVSSLSLCGLPFLAGFYSKDL----ILELVCFSWVNFLIFFLYFFSTGLTAAYSFR 395
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-367 |
2.72e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 177.93 E-value: 2.72e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 43 NGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 123 YCLViyyqnVKSYSAG----MLTALSNRIGDVAILISIAWMLN-FGSWNY--IyyynFISDSFEMK-----LITILIILA 190
Cdd:PRK12650 147 FFLI-----ARSGSGGeagsIRTLILTFFGGLTLLAAVAIAATqTGTTSLsgI----LHSDVWAEKpglttVVAVLIAVA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 191 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DLYNFGWFLLIIGCMTMFMAGLGANFEFDLK 269
Cdd:PRK12650 218 AFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAVWNWLLIIVGMITALMGAVFAVQKTDLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 270 KIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVS 346
Cdd:PRK12650 298 KLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIA 376
|
330 340
....*....|....*....|.
gi 2088662732 347 SLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12650 377 ALSMAAVPPLFGFVSKEGMLT 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
1.00e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 175.11 E-value: 1.00e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 53 LDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 132 VKSYSAGMLTALSNRIGDVAILI------------SIAWMLNFGswnyiyyyNFISDSFEMKLITILIILAAMTKSAQIP 199
Cdd:PRK12647 142 EAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 200 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 278
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 279 QLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPF 355
Cdd:PRK12647 294 ALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330
....*....|..
gi 2088662732 356 LAGFYSKDLILE 367
Cdd:PRK12647 373 LFGFLAKELIYE 384
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
50-367 |
7.14e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 172.72 E-value: 7.14e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 -QNVKSYSAGMLTALSNRIGDVAILISIAWML----NFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWL 204
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 283
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 284 MSILSMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSS 347
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 2088662732 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-422 |
5.54e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 169.69 E-value: 5.54e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 70 LVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 149 DVAILISIA---WMLN-------FGSWNYIYYYNFISDSFeMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALV 218
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 219 HSSTLVTAGVYLLIRFSPMLDLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFF 297
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 298 HLLTHALFKALLFMCAGSMIHNL--------KDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElv 369
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN-- 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 370 cFSWVNFLIF-FLYFFSTGLTAAYSFRLFYYSMSGD---NNFYSSFCFDDSGYYISF 422
Cdd:CHL00025 423 -DSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
53-367 |
2.07e-43 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 165.70 E-value: 2.07e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 53 LDWMSLIFMSFVMYISSLVIYYSEDYMSGEK-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 130
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 131 NVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPA 206
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 285
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 286 ILSMG----------YSKL-------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSL 348
Cdd:PRK12646 316 MVGIGggyaqhqqdaIASIyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 2088662732 349 SLCGLPFLAGFYSKDLILE 367
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-573 |
1.04e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 151.16 E-value: 1.04e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 392 YSFRLFYYSMSGDNNFYSSFCFDDSGYYISFGMIFLLIVAVFGGSFLSWLIFPIPYMISLPYYLKFLTMFVVLLGAYLGY 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 472 LISEMNLSRVLFSLSGlPFVSFVGSMWFMPFLSTKFISYLPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIGYIQGWY 551
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 2088662732 552 DSNFKIYLLTFIFWMLFLVIYF 573
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
32-478 |
2.44e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 159.27 E-value: 2.44e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 32 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISI 111
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 112 LLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWmlnfgswNYIYYYNFIsdsfemkLITILIILAA 191
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGGSGSF-------LCCLFFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 192 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKI 271
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 272 IALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 351
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGLS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 352 GLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTGLTAAYSFRLFyysmsgdNNFYSSFCFDDSGYYISFGMIFLLiva 431
Cdd:MTH00063 328 GVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC-------LILFGVKSSLSSGVRFLFFNSGLM--- 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2088662732 432 VFGGSFLSWLIFPI-PYMISLPYYLKFLTMFVVLLGAYLGYLISEMNL 478
Cdd:MTH00063 398 VFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNL 445
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-398 |
7.53e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 161.63 E-value: 7.53e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYM-SGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKS-----YSAGMLTALsnriGDVAILISIAWMLNF-GSWNYiyyYNFISDSFEMKLITI---LIILAAMTKSAQIP 199
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQAaGTYRL---SELLADPPTGPAVSVavvLILVGALSKSAIVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 200 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 278
Cdd:PRK12644 222 FHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 279 QLGLMMSILSMGYSKLAFFHL---LTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPF 355
Cdd:PRK12644 302 QLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2088662732 356 LAGFYSKDLILELV----CFSWVNFLIFFLYFFSTGLTAAYSFRLFY 398
Cdd:PRK12644 381 LLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
50-367 |
1.06e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 160.86 E-value: 1.06e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEK-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 -YQNVKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWN---YIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSW 203
Cdd:PRK12645 153 wYEREASRYGAQKSMLITVFGGLSMLGGFILLyIMTGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTVtlVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 282 LMMSILSMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNV 345
Cdd:PRK12645 312 LIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALI 390
|
330 340
....*....|....*....|..
gi 2088662732 346 SSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12645 391 GALSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
21-366 |
1.91e-41 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 155.90 E-value: 1.91e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 21 ILGIYYLLFDYSVFVEWELFNLnGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMS-------GEKNMNRFIIIVL 93
Cdd:PRK06525 42 LSLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 94 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYNF 173
Cdd:PRK06525 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 174 ISDSfeMKLITILIIL-AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLY--NFGWFLLII 250
Cdd:PRK06525 201 LHGS--LKYLVFLGILfAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGYVGAVM 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 251 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGY--SKLAF----FHLLTHALFKALLFMCAGSMIHNLkDTQ 324
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYSC-GTR 357
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2088662732 325 DIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK06525 358 LLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-367 |
9.27e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 139.96 E-value: 9.27e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 47 VVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV 126
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 127 IYYQNVKSYSAG-----MLTALSNRIGDVAILISIAWMLNFGSWNYIYYYNFISD--SFEMKLIT-ILIILAAMTKSAQI 198
Cdd:PRK12649 152 GYWRHRPESVYGatkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITlILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 199 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALST 276
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 277 LSQLGLMMSIlsMGYSK---------LAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSS 347
Cdd:PRK12649 311 ISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340
....*....|....*....|
gi 2088662732 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-399 |
8.44e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 128.46 E-value: 8.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSedYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 QNVKSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAM 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 209 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG- 281
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGy 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 282 --LMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGF 359
Cdd:PRK08375 310 ilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2088662732 360 YSK-DLILELVCFSWVNFLIFFLyfFSTGLTAAYSFRLFYY 399
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-372 |
1.55e-26 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 114.22 E-value: 1.55e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 94 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YSAGMLTALSNRIGDVAILISIAWMlnfgsWNYIYYYN 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 173 FIS------DSFEMKLITILIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSpmLDLYN--- 242
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV--FDLLGapg 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 243 --FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMsiLSMGYSKL----------------AFFHLLTHAL 304
Cdd:PRK06521 273 wwWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIF--VGLGLAMVfiaygmpllaalaltaALYHLLNHAL 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2088662732 305 FKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCFS 372
Cdd:PRK06521 351 FKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-315 |
2.31e-26 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 112.87 E-value: 2.31e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 56 MSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIiVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKs 134
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVR-ALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 135 ysAGMLTA----LSNRIGDVAILISIA-WMLNFGSWNYIYYYNFISD---SFEMKLITILIILAAMTKSAQIPFSSWLPA 206
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 207 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDLYNFG-WFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 285
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 2088662732 286 ILSMGYSKLAFFHLLTHALFKALLFMCAGS 315
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
49-367 |
6.05e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.52 E-value: 6.05e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYYSEDY---MSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 126 VIY-YQNVKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYnfiSDSFEMKLITILIILAAMTKSAQIPFSSW 203
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 204 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFspMLDLYN----FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 278
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelwWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 279 QLGL-----------------MMSILSMGYsklAFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSV 341
Cdd:PRK08667 305 NIGIilmgiglyvifgvygldTLALLALGG---ALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSA 380
|
330 340
....*....|....*....|....*.
gi 2088662732 342 CFNVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
143-398 |
4.15e-25 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 109.61 E-value: 4.15e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 143 LSNRIGDVAILISIAWMLNF-GSWNYIYYYNFIS----DSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSAL 217
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtanlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 218 vHSSTLVTAGVYLLIRFSPMLDLYNFGW-FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAF 296
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 297 FHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYS-KDLILELVCFSWVN 375
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVSPWL 415
|
250 260
....*....|....*....|...
gi 2088662732 376 FLIFFLYFFSTGLTAAYSFRLFY 398
Cdd:PRK07390 416 VGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-398 |
2.08e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.82 E-value: 2.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 51 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGE--KNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKSYSAGmLTALSNRIGDVAILISIAWMLNFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAM 208
Cdd:PRK06589 159 TRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 209 AAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 281
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 282 LMM---SILSMGYSKLAFFHLLTHALFKALLFMCAGSmIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAG 358
Cdd:PRK06589 318 LALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2088662732 359 FYSKDLILELVCFS---WVNFLIFFLYFFSTGLTAAYSFRLFY 398
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-367 |
3.19e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.80 E-value: 3.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 82 EKNMNRFIIIVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGM-LTALSNrIGDVAILISIAwm 159
Cdd:PRK07234 89 ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV-- 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 160 LNFGSWNYIyyyNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLD 239
Cdd:PRK07234 166 LVYQANGTF---AFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 240 LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGysklAFFHlLTHALFKALLFMCAGSmIHN 319
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2088662732 320 LKDTQDIRFMGSIVYFMPLTsvcfnVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-367 |
1.46e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 101.33 E-value: 1.46e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 53 LDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 133 -KSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYNFISDSFEM--KLITILIILAAMTKSAQIPFSSWLPAAM 208
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 209 -AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 282
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 283 MMSILSMGYSKL---------------AFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFMGSIVYFMPLTSVCFNVSS 347
Cdd:PRK08376 326 MLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340
....*....|....*....|
gi 2088662732 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYE 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-398 |
2.16e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 100.82 E-value: 2.16e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 129
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 130 QNVK-SYSAGMLTALSNRIGDVAILISIAWMLN-FGSWN--------YIYYYNFISDSFEMKLITILIILAAMT-----K 194
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 195 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF--------SPMLDLYN-FGWFLLIIGCMTMFMAGLGANF 264
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAaLSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 265 EFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSV 341
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 342 CFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTgLTAAYSFRLFY 398
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
122-396 |
2.32e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 91.37 E-value: 2.32e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 122 SYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYNFIS--DSFEMKLITILIILAAMTKSAQI 198
Cdd:PRK08377 144 AYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAGtiDPTVAQVGLALLIFGLAVEAELF 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 199 PFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR----FSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 273
Cdd:PRK08377 224 PLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIA 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 274 LSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGsIVYFMPLTSVCFNVSSLSL 350
Cdd:PRK08377 303 YSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMPLTALALTIGALST 381
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2088662732 351 CGLPFLAGFYSKDLILeLVCFSWVNFLIFFLYFFSTGLTAAYSFRL 396
Cdd:PRK08377 382 VGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
39-315 |
3.59e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.87 E-value: 3.59e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 39 LFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMnRFIIIVLMFIL---SMGFLIISPNLISILLGW 115
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTgfaSLAWLSGDLRLMALCWGA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 116 DGLGLVSYCLVIYYQNVKSYSAGMlTALSNRIGDVAILISIAWM-LNFGSWnyiYYYNFISD-------SFEMKLITILI 187
Cdd:PRK08601 135 TLLGLTLLIGLNKGWKVAREAAKI-SGMLFLISWLALALAIVWLfIATGEW---QLTSVLSNenlaqlgTWEKTGINLLL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 188 ILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLD-------LYNFGWFLLIIGCMTMFMagl 260
Cdd:PRK08601 211 ILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHddiaqilLLIFASISVLIGTGISLV--- 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2088662732 261 ganfEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGS 315
Cdd:PRK08601 287 ----QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-366 |
1.49e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.18 E-value: 1.49e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 108 LISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNyiyyynFISDSFEMKLITIL 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFA------FGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 187 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmldlynfGWFLLI-IGC-MTMFMAGLgANF 264
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGAaMAVYGVFF-ALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 265 EFDLKKIIALSTLSQLGLMMSILSMGySKL----AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTS 340
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTA 338
|
250 260
....*....|....*....|....*.
gi 2088662732 341 VCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
181-397 |
4.69e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 87.06 E-value: 4.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 181 KLITILIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PML--DLYNFGWFLLIIGCMTMF 256
Cdd:COG1008 209 LLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFpeASAYFAPLLAALGVIGII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 257 MAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSKL--AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIV 333
Cdd:COG1008 288 YGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLA 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088662732 334 YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcFSwVNFLIFFLYFFSTGLTAAYSFRLF 397
Cdd:COG1008 367 KRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGA-FQ-VNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
21-398 |
4.89e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 87.74 E-value: 4.89e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 21 ILGIYYLLFDYSVFV-EWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYmsGEKNMNRFIIIVLMFILSM 99
Cdd:PRK08668 34 LPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 100 GFLIISPNLISILLGWDGLGLVSYcLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYNFISD-- 176
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdt 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 177 SFEMKLITILIILAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFS---PMLDLYN--------- 242
Cdd:PRK08668 191 STGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLyvlPGTKLFSefgtyrgvp 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 243 -FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIH 318
Cdd:PRK08668 270 lFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 319 NLKDTQdIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcFSWVNFLIFFLYFFSTGLTAAYSFRLFY 398
Cdd:PRK08668 350 RTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-397 |
1.24e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.52 E-value: 1.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 53 LDWMSLIFMSFVMYISSLVIYYSedYMSGEKNMNRFIIivLMFILSMGFLII--SPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYA--LLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 131 NVKSYSAGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAM 208
Cdd:TIGR01972 151 GPNRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 209 A-APTPVSALVhSSTLVTAGVYLLIRFS-PML-DLYN-FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-M 283
Cdd:TIGR01972 231 VeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFpDASLyFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 284 MSILSMGYSKL--AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYS 361
Cdd:TIGR01972 310 LGIFSFNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350
....*....|....*....|....*....|....*.
gi 2088662732 362 KDLIleLVCFSWVNFLIFFLYFFSTGLTAAYSFRLF 397
Cdd:TIGR01972 389 EFLI--LLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-404 |
1.67e-14 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 76.01 E-value: 1.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 143 LSNRIGDVAILISIAWM-----LNFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 217 LvHSSTLVTAGVYLLIRFS-PMLDLY--NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGYS 292
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 293 KL--AFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVC 370
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI--LLG 403
|
250 260 270
....*....|....*....|....*....|....
gi 2088662732 371 FSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 404
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-362 |
1.19e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 73.23 E-value: 1.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSgEKNMNR--FIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV- 126
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLE-RRGLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 127 IYYQNVKSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYNFISDSFEMK---LITILIILAAMT-KSAQ 197
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 198 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLDLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKII 272
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLlaVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 273 ALSTLSQLGLMMSIL----SMGYSkLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSL 348
Cdd:COG1007 298 AYSSIAHAGYLLLGLaagtPLGVS-AALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
330
....*....|....
gi 2088662732 349 SLCGLPFLAGFYSK 362
Cdd:COG1007 377 SLAGIPPTAGFFGK 390
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.34e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.71 E-value: 1.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 198 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPM---LDLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 273
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLggnAPLW-WGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 274 LSTLSQLGLMMSILSMGYSKLA--------------FFHLLTHALFKALLFMCAGSMIHNlKDTQDIRFMGSIVYFMPLT 339
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVI 353
|
170 180
....*....|....*....|
gi 2088662732 340 SVCFNVSSLSLCGLPFLAGF 359
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-434 |
1.67e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.06 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 180 MKLITILIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDLYNFGW---FLLIIGCMTM 255
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 256 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLKDTQDIRFMGSI 332
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 333 VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCFSWVNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFC 412
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNN 444
|
250 260
....*....|....*....|..
gi 2088662732 413 FDDSGYYISFGMIFLLIVAVFG 434
Cdd:PRK07691 445 KVPVKKLLLPAVVLVAITILYG 466
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
180-366 |
6.44e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.03 E-value: 6.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 180 MKLITILIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDLYNFGWF----LLIIGCMT 254
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIFGLLS 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 255 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKLAFF----HLLTHALFKALLFMCAGSMIHNlKDTQDIRFMG 330
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIR 369
|
170 180 190
....*....|....*....|....*....|....*.
gi 2088662732 331 SIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-366 |
1.36e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 66.90 E-value: 1.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 176 DSFEMKLITILIILAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-----DLYNFgwFLLII 250
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqerELLHP--LLATM 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 251 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLKDTQDIR 327
Cdd:PRK12663 279 AAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQ 357
|
170 180 190
....*....|....*....|....*....|....*....
gi 2088662732 328 FMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-367 |
2.50e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 66.15 E-value: 2.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 194 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLDLYNFGW-FLLIIGCMTMFMAGLGANFEFDLKKI 271
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 272 IALSTLSQLGLMMSILSM----GYSKlAFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSS 347
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPA 378
|
170 180
....*....|....*....|
gi 2088662732 348 LSLCGLPFLAGFYSKDLILE 367
Cdd:PRK12665 379 LNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-398 |
6.24e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 6.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 185 ILIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLD----LYNFGWFLLIIGCMTMFMAG 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgaAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 260 LGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAF---FHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSIVYFM 336
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088662732 337 PLTSVCFNVSSLSLCGLPFLAGFYSKDLIL-ELVCFS-WVNFLIFFLYFFstgltAAYSFRLFY 398
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLL-----AASSFAIFL 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-362 |
2.20e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 59.83 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 50 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSgEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYNFISDSFEMKLI----TILIILAAMTKSAQIP 199
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 200 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLDLYNFGW---FLLIIGCMTMFMAGLGANFEFDLKKIIALS 275
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 276 TLSQLG-LMMSILSMGYSKL--AFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCG 352
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 2088662732 353 LPFLAGFYSK 362
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
24-396 |
1.20e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 57.65 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 24 IYYLLFDYSVFVEWELFNLNGSMVVMtLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEK-NMNRFIIIVLMFILSMGFL 102
Cdd:TIGR01770 40 IVLLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 103 IISPNLISILLGWDGLGLVSYCLVIY-YQNVKSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYNFISDSFE- 179
Cdd:TIGR01770 119 VSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFEDLLLFLSNGMLn 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 180 ---MKLITILIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPML---DLYNFGWFLLIIGC 252
Cdd:TIGR01770 199 islLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYIlfgFSEAWQIFLAIIAF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 253 MTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGYS--KLAFFHLLTHALFKALLFMCAGSM-IHNLKDTQDIRF 328
Cdd:TIGR01770 278 LSMLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLEgiKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWIEYISD 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2088662732 329 MGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCFSWVNFLIFFLYFFSTGLTAAYSFRL 396
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF-ALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-362 |
2.32e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.47 E-value: 2.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 54 DWMSLIFMSFVMYISSLVIYYSEDYM-SGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 132 VKSYSAGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYNFISDSFEMKLITILIILAAMT-----KSAQIPFSSWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FSPMLDLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFYFSSNEWHLLleILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 281 GLMMSILSMGYSKLAFFHLLTHALFkaLLFMCAGS----MIHNLKD-TQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPF 355
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 2088662732 356 LAGFYSK 362
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-362 |
3.85e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.81 E-value: 3.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 180 MKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYNFGWFLLIIGCMTMFMAG 259
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 260 LG-------ANFEFDLKKIIALSTLSQLGLMMSILSMG-YSKL--AFFHLLTHALFKALLFMCAGSMIHNLkDTQDIRFM 329
Cdd:PRK12662 288 LAivfgsvlAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDC 366
|
170 180 190
....*....|....*....|....*....|...
gi 2088662732 330 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSK 362
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-369 |
5.22e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.75 E-value: 5.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 184 TILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYnfgwFLLIIGCMTMFMAGLGAN 263
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 264 FEFDLKKIIALSTLSQLGLMMSILSMGySKLAFFHLLTHALFKALLFMcagsMIHNLKdTQDIRFMGSIVYFMPLTSVCF 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....*..
gi 2088662732 344 NVSSLSLCGLPFLAGFYSKDLIL-ELV 369
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-367 |
7.28e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.10 E-value: 7.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 60 FMSFVMYISSLVIYYSEDYMSGEKNMNRFIIIVLMF-ILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYSAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 139 MLTALSNrigdvailISIAWMLNFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPF--SSWLPAAMAAPTPVSA 216
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 217 LVHSSTLVTAGVYLLIR---FSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM---- 289
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 290 --GYSKLAFFHLLT-------HALFKALLFMCAGSMihnlkDTQDIRFMGSIVYFMplTSVCFNVSSLSLCGLPFLAGFY 360
Cdd:PRK06459 276 kqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGV 348
|
....*..
gi 2088662732 361 SKDLILE 367
Cdd:PRK06459 349 ASWLLLE 355
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
194-361 |
7.51e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 51.96 E-value: 7.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 194 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLDLYnFGWFLLIIGCMTMFMAGLGANFEFDL 268
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvqmlPDAHVY-FAPALAILGVVNIIYGALNAFAQDNV 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 269 KKIIALSTLSQLGLMM----SILSMGYSKlAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIVYFMPLTSVCFN 344
Cdd:PRK12561 276 KRRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFT 353
|
170
....*....|....*..
gi 2088662732 345 VSSLSLCGLPFLAGFYS 361
Cdd:PRK12561 354 ASSMASLALPGMSGFVS 370
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-366 |
1.01e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 186 LIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------DLYNFGWFLLIIGCM-TMFM 257
Cdd:PRK12666 215 LLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLAF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 258 AGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---AFFHLLTHALFKALLFMCAGSM----------------IH 318
Cdd:PRK12666 293 GAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLY 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2088662732 319 NLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 366
Cdd:PRK12666 373 DLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-443 |
9.06e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.57 E-value: 9.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 26 YLLFDYSVFVEWELFNLNGSmvvmTLILDWMSLIFMSFVMYISSLVIYYSedymSGEKNMNRFIIIVLMFILSMGFLIIS 105
Cdd:PRK12664 11 YGFFFGLIFIVLPLLLYDWS----EPVYNLDLVLFIVLSFSLALIFLYIL----PIKNMRFSEMLCYLLYYISSIAAISS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 106 PNLISILLGWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYyynfisdsfemkliTI 185
Cdd:PRK12664 83 SSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYC--------------KL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 186 LIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLDLYNFGWFLLIIGCMTMFMAGLGANFE 265
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 266 FDLKKIIALSTLSQLGLMMSILSMGYSK-----LAFFHLLTHALFKALLFMCAGSMIHNLKdTQDIRFMGSIvYFMPLTS 340
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGGL-FKMSLEA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 341 VCFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYF--FSTGLTAAYSFRLFYY---SMSGDNNFYSSFCFDD 415
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYafiSKSKSKPEAEKVYIGS 380
|
410 420
....*....|....*....|....*...
gi 2088662732 416 sgyyiSFGMIFLLIVAVFGGSFLSWLIF 443
Cdd:PRK12664 381 -----KLSMIILVLICVVLGMFNSYLLF 403
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
154-400 |
9.32e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 48.04 E-value: 9.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 154 ISIAWMLNFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 234 FSPMLDlynfGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKLAFFHLLTHALFKALLFmca 313
Cdd:MTH00200 145 LAPALN----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 314 gsMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILelvcfswVNFLIFFLYFFSTGLTAAYS 393
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 2088662732 394 FRLFYYS 400
Cdd:MTH00200 288 LSLFFYL 294
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
49-367 |
1.17e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.10 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYyseDYMSGEKNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 129 YQNVKSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNY--IYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLP 205
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 206 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLDLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 281 GLMMSILSMG--YSKLA-FFHLLTHALFKALLFMCAGSmIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLA 357
Cdd:PRK06277 303 GYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|
gi 2088662732 358 GFYSKDLILE 367
Cdd:PRK06277 382 GFQSKLMLAQ 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
177-392 |
2.18e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.40 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 177 SFEMKLITILIILAAM-TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDLYNFGWFLL-----II 250
Cdd:PRK07363 200 SLNTQLILLTGLLLGFgIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 251 GCMTMFMAGLGANFEFDLKKIIALSTLSQLG--LMMSILSMGYSKL-AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIR 327
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLD 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2088662732 328 FMGSI---VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvcFSWVNFLI-FFLYFFSTGLTAAY 392
Cdd:PRK07363 357 VLNGLmnpIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ---GSFSTFPIpTLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
182-367 |
2.30e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 46.84 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 182 LITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYnfgwFLLIIGCMTMFMAGLG 261
Cdd:MTH00070 93 LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWG 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 262 ANFEFDLKKIIALSTLSQLGLMMSILSMGySKLAFFHLLTHALFKALLFMcagsMIHNLKDTQDIRFMGSIVYFMPLTSV 341
Cdd:MTH00070 169 GLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSM 243
|
170 180
....*....|....*....|....*.
gi 2088662732 342 CFnVSSLSLCGLPFLAGFYSKDLILE 367
Cdd:MTH00070 244 MM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
147-445 |
2.39e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 46.98 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 147 IGDVAILISIAWML-NFGSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 225
Cdd:MTH00204 174 AGSVFMLLGIFQLYsITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 226 AGVYLLIRFS-PMLDLYNFGWFLLII--GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSKL--AFFHL 299
Cdd:MTH00204 254 LGGYGFLRFSwPLFPAASEYFAPLIVmlSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLM 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 300 LTHALFKALLFMcAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSkDLILELVCFSWvNFLIF 379
Cdd:MTH00204 334 LAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVG-EFFSLLAAFEY-SLGLG 410
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2088662732 380 FLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFDDSGYYIsFGMIFLLIVAVFGGSFLSWLIFPI 445
Cdd:MTH00204 411 VLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRREL-LAILPLIIAIFLLGIVPFIIIDLV 475
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
147-423 |
7.47e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.43 E-value: 7.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 147 IGDVAILISIAWMLNF-GSWNYIYYYNFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 225
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 226 AGVYLLIRFS-PMLDLYN--FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSKL--AFFHL 299
Cdd:MTH00217 251 LGGYGFIRFSwPLLPEASeyFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 300 LTHALFKALLFMcAGSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCFSWvNFLIF 379
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSL-LAAFEY-SYIVG 407
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2088662732 380 FLYFFSTGLTAAYSFRLfyysmsgdnnfYSSFCFDDSGYYISFG 423
Cdd:MTH00217 408 VLASLGMVLSAGYSIYL-----------YNRVCFGAPSKYLYFS 440
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
147-427 |
1.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 147 IGDVAILISIAWMLNF-GSWNYIYYY--NFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTL 223
Cdd:MTH00226 193 IGSVLMLLCLFSLYNIhGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 224 VTAGVYLLIRFS-PMLDL--YNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLmMSILSMGYSKL----AF 296
Cdd:MTH00226 273 LKLGGYGLVRLSwPILPLgaQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL-VSITLVTHDIIgltgSI 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 297 FHLLTHALFKALLFMCAgSMIHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCFSWvNF 376
Cdd:MTH00226 352 FIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NP 428
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2088662732 377 LIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFCFD--DSGYYISFGMIFL 427
Cdd:MTH00226 429 IIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDvnRREFYITASMVFF 481
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
182-392 |
1.62e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.31 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 182 LITILIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLDLYNFGW-----FLLIIGCMTM 255
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 256 FMAGLGANFEFDLKKIIALSTLSQLG--LMMSILSMGYSKL-AFFHLLTHALFKALLFMCAGsMIHNLKDTQDIRFMGSI 332
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 333 V---YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvcfswVNFLIF----FLYFFSTGLTAAY 392
Cdd:PRK06473 362 LnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
49-88 |
1.00e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 37.41 E-value: 1.00e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2088662732 49 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEKNMNRF 88
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
172-443 |
1.08e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 41.35 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 172 NFISDSFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIrfspmldLYNFGWFLLIIG 251
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLS-------YLINNNFIIIII 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 252 CMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDTQDIRFMGS 331
Cdd:MTH00160 151 ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSK 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 332 IVYFMpltsvcFNVSSLSLCGLPFLAGFYSKDLILELVCFSWVNFLIFFLYFFSTgLTAAYSFRLFYYSMSGdNNFYSSF 411
Cdd:MTH00160 231 KIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLML-NYNKNKW 302
|
250 260 270
....*....|....*....|....*....|..
gi 2088662732 412 CFDDSGYYISFGMIFLLIVAVFGGSFLSWLIF 443
Cdd:MTH00160 303 NLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
198-361 |
2.13e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.85 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 198 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS----PMLDLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 273
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNagmlPDAHAQ-FAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 274 LSTLSQLGLMM----SILSMGYSKlAFFHLLTHALFKALLFMCAGSMiHNLKDTQDIRFMGSIVYFMPLTSVCFNVSSLS 349
Cdd:PRK02546 309 YSSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
170
....*....|..
gi 2088662732 350 LCGLPFLAGFYS 361
Cdd:PRK02546 387 SLALPGMSGFVA 398
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
54-362 |
4.41e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 39.65 E-value: 4.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 54 DWMSLIFMSFVMYISSLVIYYSEDYM--SGEKnMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVeqSGTP-LGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 132 VKSYSAGMLTALSNRIGDVAILI---SIAWMLNFGSWNYIYYYNFISDSFEMKLITILIILAAMT--KSAQIPFSSWLPA 206
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIafKISAVPFHQWTPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 207 AM-AAPTPVSALVhSSTLVTAGVYLLIR-----FSPMLDLYNFGWFLLIIgcMTMFMAGLGANFEFDLKKIIALSTLSQL 280
Cdd:PRK02504 236 VYeGSPTPVVAFL-SVGSKAAGFALAIRllvtaFPSFDEQWKLLFTALAI--LSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 281 GLMMSILSM----GYSKLAFFHLlthalfkALLFMCAGS----MIHNLKDTQD-IRFMGSIVYFMPLTSVCFNVSSLSLC 351
Cdd:PRK02504 313 GFVMIGLVAgteaGYASMVFYLL-------AYLFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLG 385
|
330
....*....|.
gi 2088662732 352 GLPFLAGFYSK 362
Cdd:PRK02504 386 GIPPLAGFFGK 396
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
24-408 |
7.19e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 39.15 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 24 IYYLLFDYSVFVEWELFNLNGSMVVMTLIL--DWMSLIFMSFVMYISSLVIYYSEDYMSGEkNMNRFIIIVLMFILSMGF 101
Cdd:MTH00206 26 TFFSFLIALLFLLWFKWSSEVGWSFSNLYLsyDPLSSPLVILSCWLLPLMFLASQNHMKNE-PINRQRIYITLLIVLQLF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 102 LII---SPNLISILLGWDGLGLVSYCLVIYYQNVKS-YSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYNFISD 176
Cdd:MTH00206 105 LILffsSSNLLLFYILFEASLIPTLLLITRWGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNSlGSLSLYILYFSKLT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 177 SFEMKLITILIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDLYN--FGWFLLIIGCMT 254
Cdd:MTH00206 185 TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTklSSYFFIILGLWG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088662732 255 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFmCAGSMIHNLKDTQDIRFMGS 331
Cdd:MTH00206 265 SIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRG 343
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088662732 332 IVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcFSWVNFLIFFLyFFSTGLTAAYSFRLFYYSMSGDNNFY 408
Cdd:MTH00206 344 LQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSL-FSWSNFTLPLL-GLGFLFTAIYSLYMFVMTQHGKTPNH 418
|
|
| |
