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Conserved domains on  [gi|2083672306|ref|XP_043010221|]
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uncharacterized protein E1B28_007402 [Marasmius oreades]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-152 7.30e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 106.15  E-value: 7.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHGvwpppspee 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-----DKEA-EEKFKEINEAYEVLSDPEKRAQYDQFG--------- 65

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306  84 errrdhhhrtrtssyhhhHDPFVNDPFFNDPFlNRPFHRFNFTDPFDLFERMFSDTMYGGSSYARPSHR 152
Cdd:TIGR02349  66 ------------------HAGFNGGGGGGGGG-FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRR 115
Mlf1IP super family cl10932
Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved ...
 125-218 3.12e-04

Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved central region of a group of proteins that are putative transcriptional repressors. The structure contains a putative 14-3-3 binding motif involved in the subcellular localization of various regulatory molecules, and it may be that interaction with the transcription factor DREF could be regulated through this motif. DREF regulates proliferation-related genes in Drosophila. Mlf1IP is expressed in both the nuclei and the cytoplasm and thus may have multi-functions.


The actual alignment was detected with superfamily member pfam10248:

Pssm-ID: 463022 [Multi-domain]  Cd Length: 174  Bit Score: 41.18  E-value: 3.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306 125 FTDPFDlfeRMFSDTMYGGSSYARPSHRHERRSPWDEDPLPQARRMHSDMFNLMSSMHRNMLSGFSDFPGNVDAQST--- 201
Cdd:pfam10248   8 FSDPFG---QFFMPSITDGRERGRGGAEHPNHGAMARNPFGMMDGMFSNMRNRMEEMHRNFEGMSNDPNGHSFSSSSvmt 84

                          90
                  ....*....|....*...
gi 2083672306 202 -SGNGNTRytRQVYMSSS 218
Cdd:pfam10248  85 ySKVGDGP--PKVYQASS 100
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-152 7.30e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 106.15  E-value: 7.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHGvwpppspee 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-----DKEA-EEKFKEINEAYEVLSDPEKRAQYDQFG--------- 65

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306  84 errrdhhhrtrtssyhhhHDPFVNDPFFNDPFlNRPFHRFNFTDPFDLFERMFSDTMYGGSSYARPSHR 152
Cdd:TIGR02349  66 ------------------HAGFNGGGGGGGGG-FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 4-71 1.96e-24

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 94.46  E-value: 1.96e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYD 71
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNP----GDPEAEEK-FKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-74 1.88e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 1.88e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG----DPEA-EEKFKEINEAYEVLSDPEKRAAYDRFG 66
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-74 2.01e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 90.97  E-value: 2.01e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083672306   1 MA-SDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK10767    1 MAkRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG----DKEA-EEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ smart00271
DnaJ molecular chaperone homology domain;
4-65 4.33e-18

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 77.27  E-value: 4.33e-18
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306    4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEALENSFRQVSNAYEVLNDPK 65
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPG----DKEEAEEKFKEINEAYEVLSDPE 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-63 1.78e-17

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 75.27  E-value: 1.78e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlseKEALENSFRQVSNAYEVLND 63
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD-----DPEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-74 3.42e-16

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 79.09  E-value: 3.42e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHpnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-----KAPDAAEI-FAEINEAYEVLSNPEKRANYDKYG 70
Mlf1IP pfam10248
Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved ...
 125-218 3.12e-04

Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved central region of a group of proteins that are putative transcriptional repressors. The structure contains a putative 14-3-3 binding motif involved in the subcellular localization of various regulatory molecules, and it may be that interaction with the transcription factor DREF could be regulated through this motif. DREF regulates proliferation-related genes in Drosophila. Mlf1IP is expressed in both the nuclei and the cytoplasm and thus may have multi-functions.


Pssm-ID: 463022 [Multi-domain]  Cd Length: 174  Bit Score: 41.18  E-value: 3.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306 125 FTDPFDlfeRMFSDTMYGGSSYARPSHRHERRSPWDEDPLPQARRMHSDMFNLMSSMHRNMLSGFSDFPGNVDAQST--- 201
Cdd:pfam10248   8 FSDPFG---QFFMPSITDGRERGRGGAEHPNHGAMARNPFGMMDGMFSNMRNRMEEMHRNFEGMSNDPNGHSFSSSSvmt 84

                          90
                  ....*....|....*...
gi 2083672306 202 -SGNGNTRytRQVYMSSS 218
Cdd:pfam10248  85 ySKVGDGP--PKVYQASS 100
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-152 7.30e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 106.15  E-value: 7.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHGvwpppspee 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-----DKEA-EEKFKEINEAYEVLSDPEKRAQYDQFG--------- 65

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306  84 errrdhhhrtrtssyhhhHDPFVNDPFFNDPFlNRPFHRFNFTDPFDLFERMFSDTMYGGSSYARPSHR 152
Cdd:TIGR02349  66 ------------------HAGFNGGGGGGGGG-FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 4-71 1.96e-24

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 94.46  E-value: 1.96e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYD 71
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNP----GDPEAEEK-FKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-74 1.88e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 1.88e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG----DPEA-EEKFKEINEAYEVLSDPEKRAAYDRFG 66
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-74 2.01e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 90.97  E-value: 2.01e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083672306   1 MA-SDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK10767    1 MAkRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG----DKEA-EEKFKEIKEAYEVLSDPQKRAAYDQYG 70
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 4-74 3.86e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 87.59  E-value: 3.86e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNVTLSEKEalensFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKR-----FKEVSEAYEVLSDAQKRESYDRYG 67
PRK14279 PRK14279
molecular chaperone DnaJ;
4-71 1.34e-18

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 85.94  E-value: 1.34e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlseKEALENSFRQVSNAYEVLNDPKTKREYD 71
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPG-----DPAAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 4-74 1.87e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 85.23  E-value: 1.87e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPE---NRKEA-EQKFKEIQEAYEVLSDPQKRAMYDRFG 71
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-74 2.69e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 84.82  E-value: 2.69e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306   3 SDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14294    4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNP----GDKEA-EELFKEAAEAYEVLSDPKKRGIYDQYG 70
DnaJ smart00271
DnaJ molecular chaperone homology domain;
4-65 4.33e-18

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 77.27  E-value: 4.33e-18
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306    4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEALENSFRQVSNAYEVLNDPK 65
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPG----DKEEAEEKFKEINEAYEVLSDPE 59
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 1-74 8.88e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 83.70  E-value: 8.88e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14281    1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD----NKEA-EEHFKEVNEAYEVLSNDDKRRRYDQFG 69
PRK14289 PRK14289
molecular chaperone DnaJ;
4-74 1.29e-17

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 82.96  E-value: 1.29e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNP----GDKEAEEK-FKEAAEAYDVLSDPDKRSRYDQFG 71
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-63 1.78e-17

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 75.27  E-value: 1.78e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlseKEALENSFRQVSNAYEVLND 63
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD-----DPEAEEKFKEINEAYEVLSD 55
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-158 3.39e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 81.77  E-value: 3.39e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHGvwppps 80
Cdd:PRK14277    3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNP----GDKEA-EQKFKEINEAYEILSDPQKRAQYDQFG------ 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306  81 peeerrrdhhhrtrtssyHHHHDP--FVNDPFFNDPFlNRPFHRFNFTDPFDLFERMFSDtMYGGSSyarpshRHERRSP 158
Cdd:PRK14277   72 ------------------HAAFDPggFGQGGFGQGGF-GGGGFDFDFGGFGDIFEDIFGD-FFGTGR------RRAETGP 125
PRK14297 PRK14297
molecular chaperone DnaJ;
1-74 5.63e-17

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 80.98  E-value: 5.63e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083672306   1 MAS-DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14297    1 MASkDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG----NKEA-EEKFKEINEAYQVLSDPQKKAQYDQFG 70
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 4-168 6.22e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 81.09  E-value: 6.22e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNVTLSEKealensFRQVSNAYEVLNDPKTKREYDRHGVWPPPSPEE 83
Cdd:PRK14292    3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEK------FAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306  84 errrdhhhrtrtssyhhhhdpfvndpffNDPFLNRPFhrfnftDPFDLFERMFSDTMYGGSSYARPSHRHERRSPWDEDP 163
Cdd:PRK14292   77 ----------------------------GDPFGGMGF------DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARIT 122


                  ....*
gi 2083672306 164 LPQAR 168
Cdd:PRK14292  123 LEQAR 127
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 1-74 7.68e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 80.56  E-value: 7.68e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14301    2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPD----NPEA-EQKFKEAAEAYEVLRDAEKRARYDRFG 70
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-74 1.23e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 80.10  E-value: 1.23e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsekEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14278    1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD------EEAQEKFKEISVAYEVLSDPEKRRIVDLGG 68
PRK14293 PRK14293
molecular chaperone DnaJ;
1-74 2.26e-16

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 79.26  E-value: 2.26e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHpnvtlseKEA-LENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14293    1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVN-------KEPgAEDRFKEINRAYEVLSDPETRARYDQFG 68
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 4-69 2.46e-16

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 72.34  E-value: 2.46e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKRE 69
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKG----DPKA-EERFKEINEAYELLSDAEKRAR 61
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-72 3.33e-16

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 72.83  E-value: 3.33e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEALENSFRQVSNAYEVLNDPKTKREYDR 72
Cdd:COG2214     3 DLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGG----ELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-74 3.42e-16

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 79.09  E-value: 3.42e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHpnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-----KAPDAAEI-FAEINEAYEVLSNPEKRANYDKYG 70
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 1-74 6.85e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 77.89  E-value: 6.85e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlseKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14291    1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-----PEA-EEKFKEINEAYQVLSDPEKRKLYDQFG 68
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 4-74 7.38e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 77.97  E-value: 7.38e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHpnvtlseKEA-LENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKN-------KEPdAEEKFKEISEAYAVLSDAEKRAQYDRFG 70
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 4-152 1.19e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 77.17  E-value: 1.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHGvwpppspee 83
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPD------VSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFG--------- 70

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306  84 errrdhhhrtrtssyHHHHDPFVNDPFFNDPFLNRPFHRFNFT--DPFDLFErmfsdtmYGGSSyARPSHR 152
Cdd:PRK14283   71 ---------------HAGMDGFSQEDIFNNINFEDIFQGFGFGigNIFDMFG-------FGGGS-RHGPQR 118
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 1-74 1.54e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 76.89  E-value: 1.54e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14290    1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPG----NKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 4-81 3.18e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 74.98  E-value: 3.18e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHGV------W- 76
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPD------VNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTtaasagWq 78


                  ....*.
gi 2083672306  77 -PPPSP 81
Cdd:PRK14299   79 gPPPGP 84
PRK14280 PRK14280
molecular chaperone DnaJ;
4-74 7.57e-15

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 74.76  E-value: 7.57e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPD------INKEEGADEKFKEISEAYEVLSDDQKRAQYDQFG 69
PRK14295 PRK14295
molecular chaperone DnaJ;
4-71 1.82e-14

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 73.73  E-value: 1.82e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNVTLSEKEalensFRQVSNAYEVLNDPKTKREYD 71
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEER-----FKEISEAYDVLSDEKKRKEYD 72
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 1-74 1.85e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 73.49  E-value: 1.85e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlsEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14285    1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG----NKEA-ESIFKEATEAYEVLIDDNKRAQYDRFG 69
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 6-74 3.06e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 73.10  E-value: 3.06e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306   6 YETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14286    7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNK----GNKES-EEKFKEATEAYEILRDPKKRQAYDQFG 70
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 1-74 5.09e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 72.43  E-value: 5.09e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083672306   1 MA-SDLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14276    1 MNnTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPD------INKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYG 69
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-74 2.17e-13

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 70.62  E-value: 2.17e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306   3 SDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvtlSEKealensFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PTZ00037   28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEK------FKEISRAYEVLSDPEKRKIYDEYG 90
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 1-157 1.34e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 68.12  E-value: 1.34e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvTLSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHGvwppps 80
Cdd:PRK14300    1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPD-----TTDAKDA-EKKFKEINAAYDVLKDEQKRAAYDRFG------ 68

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083672306  81 peeerrrdhhhrtrtssyhhhHDPFVNDPFFNDPFLNRPFHrfnfTDPFDLFERMFSDTMyGGSSYARPSHRHERRS 157
Cdd:PRK14300   69 ---------------------HDAFQNQQSRGGGGNHGGFH----PDINDIFGDFFSDFM-GGSRRSRPTSSKVRGS 119
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 4-74 1.88e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 64.65  E-value: 1.88e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPD------VNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 4-74 2.60e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 61.12  E-value: 2.60e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPD------LNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14288 PRK14288
molecular chaperone DnaJ;
1-74 3.98e-10

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 60.47  E-value: 3.98e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2083672306   1 MASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPnvtlSEKEAlENSFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PRK14288    1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNA----GDKEA-EEKFKLINEAYGVLSDEKKRALYDRYG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
2-65 4.78e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 52.49  E-value: 4.78e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083672306   2 ASDLYETLGVSKHATPEEIRKAYKKRALETHPDRHPNvTLSEKE---ALENSfRQVSNAYEVLNDPK 65
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRLAA-GLPEEEqrlALQKA-AAINEAYETLKDPR 67
PRK10266 PRK10266
curved DNA-binding protein;
4-152 5.39e-08

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 53.67  E-value: 5.39e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPDrhpnvtLSEKEALENSFRQVSNAYEVLNDPKTKREYDRhgVWpppspee 83
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPD------VSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQ--LW------- 69

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306  84 errrdhhhrtrtssyHHHhdpfvNDPFFNDPFLNRPFHRFNFTDPFDLFERMFSDtmYGGSSYARPSHR 152
Cdd:PRK10266   70 ---------------QHR-----NDPQFNRQFQHGDGQSFNAEDFDDIFSSIFGQ--HARQSRQRPAAR 116
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 4-71 6.13e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.88  E-value: 6.13e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083672306   4 DLYETLGVSKH---ATPEEIRKAYKKRALETHPDRH-PNVTLSEKEAlensFRQVSNAYEVLNDPKTKREYD 71
Cdd:COG5269    44 DLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTaAGGNKGCDEF----FKLIQKAREVLGDRKLRLQYD 111
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 6-74 1.46e-05

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 47.09  E-value: 1.46e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083672306    6 YETLGVSKHATPEEIRKAYKKRALETHPDRHpnvtlSEKEALENsFRQVSNAYEVLNDPKTKREYDRHG 74
Cdd:PTZ00341   576 YDILGVGVNADMKEISERYFKLAENYYPPKR-----SGNEGFHK-FKKINEAYQILGDIDKKKMYNKFG 638
Mlf1IP pfam10248
Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved ...
 125-218 3.12e-04

Myelodysplasia-myeloid leukemia factor 1-interacting protein; This entry is the conserved central region of a group of proteins that are putative transcriptional repressors. The structure contains a putative 14-3-3 binding motif involved in the subcellular localization of various regulatory molecules, and it may be that interaction with the transcription factor DREF could be regulated through this motif. DREF regulates proliferation-related genes in Drosophila. Mlf1IP is expressed in both the nuclei and the cytoplasm and thus may have multi-functions.


Pssm-ID: 463022 [Multi-domain]  Cd Length: 174  Bit Score: 41.18  E-value: 3.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083672306 125 FTDPFDlfeRMFSDTMYGGSSYARPSHRHERRSPWDEDPLPQARRMHSDMFNLMSSMHRNMLSGFSDFPGNVDAQST--- 201
Cdd:pfam10248   8 FSDPFG---QFFMPSITDGRERGRGGAEHPNHGAMARNPFGMMDGMFSNMRNRMEEMHRNFEGMSNDPNGHSFSSSSvmt 84

                          90
                  ....*....|....*...
gi 2083672306 202 -SGNGNTRytRQVYMSSS 218
Cdd:pfam10248  85 ySKVGDGP--PKVYQASS 100
djlA PRK09430
co-chaperone DjlA;
4-34 2.53e-03

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 39.02  E-value: 2.53e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 2083672306   4 DLYETLGVSKHATPEEIRKAYKKRALETHPD 34
Cdd:PRK09430  201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPD 231
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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