|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-119 |
1.42e-65 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 201.93 E-value: 1.42e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00156 150 LVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLL 229
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00156 230 ILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAY 268
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-119 |
1.44e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 114.50 E-value: 1.44e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLH-FLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYK----ILFHNYYTLKDLMGYMW 75
Cdd:COG1290 171 LVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV 250
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2080902125 76 FFLFFMYIVLEFPyiLGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:COG1290 251 FLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFY 292
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
48-119 |
6.51e-19 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 76.53 E-value: 6.51e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2080902125 48 NPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFFMYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVY 72
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
2-94 |
1.62e-14 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 65.73 E-value: 1.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 2 VEWLWGGFSVDNATLNRFYSLHF-LLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:pfam13631 76 VWLLFGGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALL 155
|
90
....*....|....
gi 2080902125 81 MYIVLEFPYILGDP 94
Cdd:pfam13631 156 IGLAQINPIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-119 |
1.42e-65 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 201.93 E-value: 1.42e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00156 150 LVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLL 229
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00156 230 ILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAY 268
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-119 |
2.18e-58 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 184.34 E-value: 2.18e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAY 279
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-120 |
1.38e-57 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 182.02 E-value: 1.38e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAYT 120
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYA 280
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-120 |
6.51e-57 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 180.11 E-value: 6.51e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00191 157 LVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLL 236
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAYT 120
Cdd:MTH00191 237 LFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYA 276
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-119 |
1.01e-52 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 169.47 E-value: 1.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAY 279
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-119 |
4.48e-52 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 167.96 E-value: 4.48e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00034 160 IVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAAL 239
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00034 240 SSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAY 278
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-120 |
1.12e-51 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 166.74 E-value: 1.12e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 2 VEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFFM 81
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 82 YIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAYT 120
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYA 279
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-119 |
2.21e-50 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 163.72 E-value: 2.21e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00022 159 IVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLL 238
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00022 239 SFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAY 277
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-119 |
3.02e-50 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 163.28 E-value: 3.02e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 2 VEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFFM 81
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
90 100 110
....*....|....*....|....*....|....*...
gi 2080902125 82 YIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAY 278
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-119 |
1.70e-48 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 158.69 E-value: 1.70e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 2 VEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFFM 81
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
90 100 110
....*....|....*....|....*....|....*...
gi 2080902125 82 YIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAY 279
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-119 |
4.98e-46 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 152.55 E-value: 4.98e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAY 279
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-119 |
1.00e-44 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 148.92 E-value: 1.00e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
90 100 110
....*....|....*....|....*....|....*....
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMY 279
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-120 |
2.74e-38 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 131.60 E-value: 2.74e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGyMWFFLFF 80
Cdd:MTH00086 149 IVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVF 227
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2080902125 81 MYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAYT 120
Cdd:MTH00086 228 IIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYA 267
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-119 |
2.12e-36 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 127.36 E-value: 2.12e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:MTH00033 157 IVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVF 236
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2080902125 81 MYIVLE--FPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00033 237 VIIGIEprIETLLQDPENFIQANPLVTPVHIQPEWYFLFAY 277
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-119 |
1.44e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 114.50 E-value: 1.44e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLH-FLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYK----ILFHNYYTLKDLMGYMW 75
Cdd:COG1290 171 LVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV 250
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2080902125 76 FFLFFMYIVLEFPyiLGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:COG1290 251 FLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFY 292
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
7-119 |
3.24e-28 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 105.06 E-value: 3.24e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 7 GGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYK-ILFHNYYTLKDLMGYMWFFLFFMYIVL 85
Cdd:MTH00046 157 GGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYSDvVYFHSYFTVKDLFLFMVVCSLLVFWLF 236
|
90 100 110
....*....|....*....|....*....|....
gi 2080902125 86 EFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:MTH00046 237 VSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFY 270
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
48-119 |
6.51e-19 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 76.53 E-value: 6.51e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2080902125 48 NPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFFMYIVLEFPYILGDPENFIKANSMITPVHIQPEWYFLFAY 119
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVY 72
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-47 |
1.47e-15 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 68.93 E-value: 1.47e-15
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSGSN 47
Cdd:cd00284 154 LVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
2-94 |
1.62e-14 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 65.73 E-value: 1.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2080902125 2 VEWLWGGFSVDNATLNRFYSLHF-LLPFILLVFVIIHLMYLHSSGSNNPLGTNSDFYKILFHNYYTLKDLMGYMWFFLFF 80
Cdd:pfam13631 76 VWLLFGGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALL 155
|
90
....*....|....
gi 2080902125 81 MYIVLEFPYILGDP 94
Cdd:pfam13631 156 IGLAQINPIWLGGP 169
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-45 |
2.02e-12 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 60.47 E-value: 2.02e-12
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLHFLLPFILLVFVIIHLMYLHSSG 45
Cdd:pfam00033 145 LVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| petB |
CHL00070 |
cytochrome b6 |
1-50 |
3.17e-07 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 46.64 E-value: 3.17e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLH-FLLPFILLVFVIIHLMYLHSSGSNNPL 50
Cdd:CHL00070 165 LVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
100-119 |
1.49e-05 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 40.54 E-value: 1.49e-05
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
1-50 |
2.59e-05 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 41.62 E-value: 2.59e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2080902125 1 VVEWLWGGFSVDNATLNRFYSLH-FLLPFILLVFVIIHLMYLHSSGSNNPL 50
Cdd:PRK03735 173 IKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
|