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Conserved domains on  [gi|207440661|ref|NP_001129047|]
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small integral membrane protein 13 [Homo sapiens]

Protein Classification

small integral membrane protein 13( domain architecture ID 11239902)

small integral membrane protein 13 (SMIM13) is a DUF4750 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4750 pfam15938
Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. ...
 1-46 2.40e-16

Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 76 and 92 amino acids in length. There are two completely conserved W residues that may be functionally important.


:

Pssm-ID: 464949  Cd Length: 52  Bit Score: 66.23  E-value: 2.40e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 207440661   1 MWHSVGLTLLVFVATLLIVLLLMVCGWYFVWHLFLSKFKFLRELVG 46
Cdd:pfam15938  1 SWENVFLFLLRPLLALLFVLLFILLGWYVAWKLVLSHVPLVQELVG 46
 
Name Accession Description Interval E-value
DUF4750 pfam15938
Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. ...
 1-46 2.40e-16

Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 76 and 92 amino acids in length. There are two completely conserved W residues that may be functionally important.


Pssm-ID: 464949  Cd Length: 52  Bit Score: 66.23  E-value: 2.40e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 207440661   1 MWHSVGLTLLVFVATLLIVLLLMVCGWYFVWHLFLSKFKFLRELVG 46
Cdd:pfam15938  1 SWENVFLFLLRPLLALLFVLLFILLGWYVAWKLVLSHVPLVQELVG 46
 
Name Accession Description Interval E-value
DUF4750 pfam15938
Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. ...
 1-46 2.40e-16

Domain of unknown function (DUF4750); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 76 and 92 amino acids in length. There are two completely conserved W residues that may be functionally important.


Pssm-ID: 464949  Cd Length: 52  Bit Score: 66.23  E-value: 2.40e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 207440661   1 MWHSVGLTLLVFVATLLIVLLLMVCGWYFVWHLFLSKFKFLRELVG 46
Cdd:pfam15938  1 SWENVFLFLLRPLLALLFVLLFILLGWYVAWKLVLSHVPLVQELVG 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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