|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.57e-158 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 447.35 E-value: 1.57e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 2070976183 321 LNTPTAILSALSTSLLPLSPLMITMF 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.15e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 388.78 E-value: 2.15e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSlNPTMLTTLAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 2070976183 321 LNT-PTAILSALSTSLLPLSPLMITMF 346
Cdd:MTH00135 320 QLTlPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.67e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 373.49 E-value: 2.67e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 2070976183 321 LNTPTAILSALSTSLLPLSPLMITMF 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.25e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 328.34 E-value: 1.25e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPnSSNHMKL-WRTNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKMkWQFEN 319
|
330 340
....*....|....*....|....*...
gi 2070976183 320 TLNTP-TAILSALSTSLLPLSPLMITMF 346
Cdd:MTH00105 320 TKPMTlLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.60e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 288.41 E-value: 6.60e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2070976183 321 LNTPTAILSALSTSLLPLSPLMITMF 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-336 |
1.59e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 262.17 E-value: 1.59e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 11 LSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLN 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 91 HPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAILSALMGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 171 NQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPMLNATVMMTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 251 LAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKTLNTPTAILSA 330
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSI 330
|
....*.
gi 2070976183 331 LSTSLL 336
Cdd:MTH00041 331 LSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.13e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 187.34 E-value: 1.13e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 1 MNPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 81 TGqwditqLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTsqsLNPTMLTTLAIL 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 241 NATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLwrTNKT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|....*
gi 2070976183 321 LNTPTAILSALSTSLLPLSPLMITM 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-275 |
3.41e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.07 E-value: 3.41e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 13 LMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITqlnhp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 93 tscLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNP-TMLTTLAILSALMGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 172 QTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQiKVLKLSTMLISWTKTPMLNATVMMTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260
....*....|....*....|....
gi 2070976183 252 AGLPPLTGFMPKWLIIQELTKQEM 275
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
4.58e-42 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 149.16 E-value: 4.58e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 7 LICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSltnawsTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 87 TQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTTLAILSALMGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 167 WMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPMLNATVMM 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 247 TLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYhSTITLPPNSSNHMKLWRTNKtlntpTA 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSLKSAPYEPK-----TK 316
|
330
....*....|....
gi 2070976183 327 ILSALSTSLLPLSP 340
Cdd:MTH00011 317 ILISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
10-343 |
2.56e-36 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 133.64 E-value: 2.56e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 10 SLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLtnawstgqwdITQL 89
Cdd:MTH00197 4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS----------LSFS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 90 NHPT---SCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPitLLLMTSQSLNPTMLTTLAILSALMGG 166
Cdd:MTH00197 74 NLYLsllSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 167 WMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPMLNATVMM 246
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 247 TLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRLAYHSTItlppnSSNHMKLWRTNKTLNTPTA 326
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI-----LSNWMINFLMKINLLYSGL 306
|
330
....*....|....*..
gi 2070976183 327 ILSALSTSLLPLSPLMI 343
Cdd:MTH00197 307 FILLMMMLPLLMIFTMI 323
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
5.07e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.44 E-value: 5.07e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 15 MGSSITISSNHWILAWTGLEINTLAIIPLI-SKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLN--- 90
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINlvl 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 91 ----------HPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLmtSQSLNPTMLTTLAIL 160
Cdd:MTH00196 84 nsgqsfssvsVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 161 SALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNP----HLTFLTFTLYTIMTTTVFLSLTQIKVLKlsTMLISWT- 235
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYK--NLIIEFSg 239
|
250 260 270
....*....|....*....|....*....|....*
gi 2070976183 236 ---KTPMLNATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:MTH00196 240 lsrRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
9.65e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 112.41 E-value: 9.65e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 23 SNHWILAWTGLEINTLAIIPLI-SKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQL--------NHPT 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 94 SC---LLLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITALLLSTLMKLPPITLLLMTS--QSLNPTM---LTTLAILSALM 164
Cdd:pfam00361 81 LLllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLIRRSLlyLPSSPFIqqiLLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 165 GGWMGLNQTQTRKILAFSSISHLGWMIIII----TYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLIS-----WT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 2070976183 236 KTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
16-270 |
3.19e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 114.06 E-value: 3.19e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 16 GSSITISSNHWILAWTGLEINTLAIIPLIS-KSYHPRAIEATIKYFLTQSTASALILF-SSLTNAwSTGQWDITQL---- 89
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaaal 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 90 -NHPTSCLLLTMAI-------AIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKL----PPITLLLMTSQSLNP---TML 154
Cdd:COG1007 193 aAGGANSPLLLLGLvlvlaglAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLLL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 155 TTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMII-IITYNPH----LTFLTFTlYTIMTTTVFLSLTQIKVLKLST 229
Cdd:COG1007 273 AVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgvsaALFYLLA-YLFMNLGAFAVILLLSRKGGEA 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2070976183 230 MLIS-----WTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQEL 270
Cdd:COG1007 352 EEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-267 |
1.06e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 109.72 E-value: 1.06e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 11 LSLMMGSSITISSNHWILAWTGLEINTLAIIPLIS-KSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQL 89
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 90 NHPTSC----LLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTMLTtlAILSALMG 165
Cdd:MTH00199 184 NSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 166 GWMGLNQTQTRKILAFSSISHLGWMIIIITYNP----HLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWT--KTPM 239
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLsrKNPV 341
|
250 260
....*....|....*....|....*...
gi 2070976183 240 LNATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-279 |
5.88e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.90 E-value: 5.88e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 10 SLSLMM--GSSITISSNHWILAWTGLEINTLAIIPLISKSY-HPRAIEATIKYFLTQSTASALILF-SSLTNAwSTGQWD 85
Cdd:PRK05777 107 LLVLFAllGMMVMVSANDLLTLFLGLELLSLPLYALAALRRdRRRSLEAAIKYFVLGALASGFLLYgMSLLYG-ATGSLS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 86 ITQL---------NHP---TSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKL----PPITLLLMTSQSL 149
Cdd:PRK05777 186 FAGIakaladgsgNSLlllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 150 NPT---MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWM---IIIITYNPHLTFLTFTL-YTIMTTTVFLSLTQI 222
Cdd:PRK05777 266 SEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEGYSAVLFYLLaYLFMTLGAFGVISLL 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070976183 223 -KVLKLSTMLISWT----KTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTA 279
Cdd:PRK05777 346 rRKGGEAESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-275 |
2.82e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.24 E-value: 2.82e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 7 LICSLSLMmgssITISSNHWILAWTGLEINTLAIIPLIS---KSYhpRAIEATIKYFLTQSTASALILF----------- 72
Cdd:TIGR01770 109 LFALLGIF----LLVSSNDLLSIYLGLELQSLCFYVLAGlkrKSR--FSTEAGLKYFILGAFSSGLLLFgisliygftgs 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 73 ---SSLTNAWSTGQWDITQLNhpTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSL 149
Cdd:TIGR01770 183 lnfEDLLLFLSNGMLNISLLL--LGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 150 -------NPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTF-------LTFTLYTIMTTTV 215
Cdd:TIGR01770 261 lfgfseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkavlfyiFIYALMSLGAFGV 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070976183 216 FLSLTQIK---VLKLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEM 275
Cdd:TIGR01770 341 LSLLRSYKdewIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGL 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-268 |
7.71e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 92.52 E-value: 7.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 13 LMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLNH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 92 ---------PTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNP--------TML 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadpalflgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 155 TTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLY----TIMTTTVFLS----LTQIKVLK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2070976183 227 LSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-267 |
1.04e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.22 E-value: 1.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 3 PHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAI---------EATIKYFLTQSTASALILFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 74 SLTNAWSTGQ--------------WDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLppI 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 140 TLLLMTSQSLNPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTF-LTFTLYTIMTTTVFLS 218
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLqASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070976183 219 LTQIKVL------------------------KLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:MTH00198 425 FTVICTLeefgtrtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
4.70e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 75.81 E-value: 4.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 51 RAIEATIKYFLTQSTASALILFS-SLTNAWSTGQWDI---------TQLNHPTSCLL----LTMAIAIKLGL*PFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 117 EVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPT-------MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 190 MII-IITYNP---HLTFLTFTL-YTIMTTTVFLSLTQIKvLKLSTMLI-----SWTKTPMLNATVMMTLLSLAGLPPLTG 259
Cdd:CHL00049 319 VIIgIIVGDSndgYASMITYMLfYIFMNLGTFACIVLFG-LRTGTDNIrdyagLYTKDPFLALSLALCLLSLGGIPPLAG 397
|
....
gi 2070976183 260 FMPK 263
Cdd:CHL00049 398 FFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.14e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 74.70 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 50 PRAIEATIKYFLTQSTASALILF-SSLTNAWSTGQwdiTQL--------NHPTSCLLLTM-----AIAIKLGL*PFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALALvfviaGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 116 PEVLQGSPMITALLLSTLMKLPPITL---LLMTSQSLNPT----MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 189 WMIIIITYNPHLTFLTFTLYtiMTTTVFLSLTQIKV-----LKLSTMLIS-----WTKTPMLNATVMMTLLSLAGLPPLT 258
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFY--LLAYLFMNLGAFACvilfsLRTGTDQISdyaglYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 2070976183 259 GFMPK 263
Cdd:PRK02504 392 GFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
4.67e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 72.81 E-value: 4.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 38 LAIIP---LISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQW--DITQL-NHPTS-------CLLLTMAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPltaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 105 KLGL*PFHFWFPEVLQGSPM-ITALLLSTLMKLP-------PITLLLMTSQSLNPTMLTtLAILSALMGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTaGSVLLAGVLLKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 177 KILAFSSISHLGWMII-IITYNPH----LTFLTFTlYTIMTTTVFLSLTQIKVlKLSTMLIS-----WTKTPMLNATVMM 246
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLglqgAVLQMVS-HGLITAALFLLVGVLYD-RTHTRDIAdlgglAKRMPVLAALFLL 378
|
250 260
....*....|....*....|.
gi 2070976183 247 TLLSLAGLPPLTGFMPKWLII 267
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-270 |
6.60e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.06 E-value: 6.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 33 LEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFS-SLTNAwSTGQW---DITQLNHPTSCLLLTMAI-----A 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLnmaDLAGALAENPTVVTAFGFvllalA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 104 IKLGL*PFHFWFPEVLQG-SPMITALLLSTLMKLPP----------ITLLLMTSQSLNpTMLTTLAILSALMGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVyaliriyftvFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 173 TQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYT----IMTTTVFLSLTQIKVLKLSTMLISWT----KTPMLNATV 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAGAIEVTYGTRRLSELSglgrRMPLTAAAF 372
|
250 260
....*....|....*....|....*.
gi 2070976183 245 MMTLLSLAGLPPLTGFMPKWLIIQEL 270
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGA 398
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
4.78e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.42 E-value: 4.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 50 PRAIEATIKYFLTQSTASALILFSSL----TNAWSTGQWDITQLNHPTSCLLLTM-----AIAIKLGL*PFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILglyfLGGGTFDLLELLNLPLPFGVQTWLFlaffiAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 121 GSPMITALLLS-TLMKLPP-------ITLLLMTSQSLNPtMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMII 192
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKMGTygflrfnLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 193 IITYNPHLTFLTFTLYTI---MTTTVFLSLTQIKVLKLSTMLIS-----WTKTPMLNATVMMTLLSLAGLPPLTGFMPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMIshgLITAALFLLVGVLYERAHTRDIAkygglANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 2070976183 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.92e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.65 E-value: 1.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 33 LEINTLAIIPLIS-KSYHPRAIEATIKYFLTQSTASALILFS---------SLTNAWSTGQWDITQLNHPTSCL-LLTMA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 102 IAIKLGL*PFHFWFPEVLQGSPM-ITALLL-STLMKLPPITLLLMT--SQSLNPT----MLTTLAILSALMGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPSsISAMLLvIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 174 QTRKILAFSSISHLGWMII-----IITYNPHL------TFLTFTLYTIMTTTVFLSLT---------QIKVLKLSTMLIS 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGDPAmasygeIALAGGIYHIVNHALYKALLfltagaviyETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 2070976183 234 WTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
5.31e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.27 E-value: 5.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 33 LEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLNH--PTSCLLLTMAIAIKLGL*P 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 111 FHFWFPEVLQGS-PMITALLLSTLMK---LPPITLLLMTSQSLNPtmLTTLAILSALMGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAePPVSALLSGVVVKagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 187 LGWMIiiitynphLTFLTFTLYTI----MTTTVFLSLTQIKVLKL----STMLISWTKTPMLnatvmMTLLSLAGLPPLT 258
Cdd:PRK07234 281 LGFIL--------AAPLVGGLYALahglVKSTLFLCAGALPSRNFteliSQMLGIGKWIPLT-----MASFSIAGFPLLA 347
|
250
....*....|...
gi 2070976183 259 GFMPKWLIIQELT 271
Cdd:PRK07234 348 GFVSKVLTLKNLL 360
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-279 |
6.48e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.31 E-value: 6.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 2 NPHAKLICSLSLMMGSSITISSNHWILAWTGLEINTLA---IIPLISKsyhpRAIEATIKYFLTQSTASALILFSSLTNA 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 79 WSTGQWDITQ----LNHPTS-------CLLLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITALLLSTLMKLPPITLLL--- 143
Cdd:PRK08668 172 AKTGTFDFADisqgLINDTStgfalivFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQsFSAVLSGQLSKLGAYGFLLvly 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 144 --MTSQSLN--------PT---MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFlTFTLYTI 210
Cdd:PRK08668 252 vlPGTKLFSefgtyrgvPLfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGF-AGGLFHV 330
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070976183 211 MTTTVFLSLT---------QIKVLKLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTA 279
Cdd:PRK08668 331 FNHALFKGLFflifaaviyRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
6.93e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.24 E-value: 6.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 80 STGQWDITQL-NHPTSCLLLTMAIAI-------KLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLM------T 145
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARlapgfaD 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 146 SQSLNPTMLTtLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIII---TYNPHLTFLTFTL-YTIMTTTVFLSLTQ 221
Cdd:PRK12644 263 VPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLVVGI 341
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2070976183 222 I-------KVLKLSTMlisWTKTPMLNATVMMTLLSLAGLPPLTGFMPK 263
Cdd:PRK12644 342 IdhstgtrDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
95-270 |
5.87e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.39 E-value: 5.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 95 CLLLTMAIAIKLGL*PFHFWFPEVLQGsPM-ITALLLSTLMKLPPITLLLMTSQ--SLNPTMLTTLAI---LSALMGGWM 168
Cdd:COG1009 214 LLLLLLGAFGKSAQFPLHFWLPDAMEG-PTpVSALLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigaITALFAALI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 169 GLNQTQTRKILAFSSISHLGWMIIIITynphLTFLTFTLYTIMTTTVFLSL-------------TQiKVLKLSTMlisWT 235
Cdd:COG1009 293 ALAQTDIKRVLAYSTVSQLGYMFLALG----VGAYVAALFHLLTHAFFKALlflgagsvihatgTR-DIRKMGGL---RK 364
|
170 180 190
....*....|....*....|....*....|....*
gi 2070976183 236 KTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQEL 270
Cdd:COG1009 365 KMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-263 |
2.40e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.35 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 97 LLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTM-----LTTLAILSALMGGWMGLN 171
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAvwnwlLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 172 QTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSL--------TQIKVLKLSTMLISWTKTPMLNAT 243
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLfmligvvdHQAGTRDIRRLGSLWRRMPFTFVS 372
|
170 180
....*....|....*....|
gi 2070976183 244 VMMTLLSLAGLPPLTGFMPK 263
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSK 392
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-268 |
2.95e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.00 E-value: 2.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 95 CLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQ--SLNPTML---TTLAILSALMGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 170 LNQTQTRKILAFSSISHLGWMIIIITynphLTFLTFTLYTIMTTTVFLSL------TQIKVL----KLSTMLISWTKTPM 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACG----LSHYSISLFHLMNHAFFKALlflsagSVIHALsdeqDMRKMGGLISFLPL 368
|
170 180
....*....|....*....|....*....
gi 2070976183 240 LNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-192 |
4.27e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 51.24 E-value: 4.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 38 LAIIPL---ISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTG--QWDITQLNHPT----SCLLLTMAI----AI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRSHTlplsTQLLLLAPIlvgfGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 105 KLGL*PFHFWFPEV-LQGSPMITALLLSTLMKLPP-------ITLLLMTSQSLNPTmLTTLAILSALMGGWMGLNQTQTR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTygllrfgVGLFPEAWVYLAPW-LATWAVVSVLYGASCAIAQKDMK 296
|
170
....*....|....*.
gi 2070976183 177 KILAFSSISHLGWMII 192
Cdd:PRK06473 297 KMVAYSSIGHMGYILL 312
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
5.92e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.08 E-value: 5.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 20 TISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSS----------LTNAWSTGQWdiTQL 89
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILW--TEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 90 NHPTSCL---LLTMAIAI-------KLGL*PFHFWFPEVLQGSPMITALLLSTLmkLPPITLL------LMTSQSLNP-- 151
Cdd:PRK06458 202 LKHASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlryyILIDAAIGSdf 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 152 --TMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIM----TTTVFLSLTQIkVL 225
Cdd:PRK06458 280 pgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFASGNV-LQ 358
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2070976183 226 KLSTMLIS-----WTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK06458 359 KYGTRDINvirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
6.61e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.07 E-value: 6.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 110 PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPTML--TTLAILSA---LMGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwqTILPLFGGltmLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 185 SHLGWMIIIITYNPHLTFLTFTLYTIMTT----TVFLSLTQIK-------VLKLSTMlisWTKTPMLNATVMMTLLSLAG 253
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAALSMAG 369
|
170
....*....|...
gi 2070976183 254 LPPLTGFMPKWLI 266
Cdd:PRK12647 370 LPPLFGFLAKELI 382
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
9.21e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 9.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 50 PRAIEATIKYFLTQSTASALILFSSLT----NAWSTGQWDITQL-NHPTSC-------LLLTMAIAIKLGL*PFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlNLPLPPgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 118 VLQGSPMITALLLS-TLMKLPPITLLLM-------TSQSLNPtMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAgILLKMGAYGLLRFslplfpdASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 190 MIIIItynphltfltFTLYT--------------IMTTTVFLSLTQIkVLKLSTMLIS-----WTKTPMLNATVMMTLLS 250
Cdd:PRK05846 316 VTLGI----------FAGNQlgiqgaifqmishgLSSAALFLLVGVL-YDRLHTRDIAdygglAKVMPVLAAFFLFFAMA 384
|
250
....*....|....*..
gi 2070976183 251 LAGLPPLTGFMPKWLII 267
Cdd:PRK05846 385 SLGLPGTSGFVGEFLIL 401
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
1.05e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 50.50 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 55 ATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLNHPT-----SCLLLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITAL 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSnVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 129 LLSTLMKLPPITLLLMTSQSLNPTM-----LTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGwmIIIITYNPHLTFL 203
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG--IILMGIGLYVIFG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 204 TFTLYTIMTTTV---------------FLSLTQIKVL------KLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMP 262
Cdd:PRK08667 321 VYGLDTLALLALggalfhslnhalfksLLFLTAGSVVhatgtrNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFAS 400
|
....*...
gi 2070976183 263 KWLIIQEL 270
Cdd:PRK08667 401 ELLLYESF 408
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-268 |
1.58e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.56 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 92 PTSCLLLTMAIAIKLGL*PFhFWFPEVLQGSPMITALLLSTLMKLPPI-------TLLLMTSQSLNPTMLTTLAILSALM 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 165 GGWMGLNQTQTRKILAFSSISHLGWMII------------IITYNPHLTFLTFTLYTIMTTTVFLSLTQikvlKLSTMLI 232
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLglalgtpagingAIFYLVHDMVVKTALFLIAGSLVRLTGYR----SLQYLGG 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 2070976183 233 SWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
2.07e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.37 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 13 LMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTA------SALILFSSLTNAWSTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 87 TQLNHPT----------SCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 153 ----MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTIMTTTVFLSL--------T 220
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2070976183 221 QIKVLKLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-267 |
3.70e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 3.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 96 LLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITL------------LLMTSQSLNpTMLTTLAILSAL 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLiirivydvfkanFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 164 MGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLY----TIMTTTVFLSLTQIK----VLKLSTMLISWT 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWK 371
|
170 180 190
....*....|....*....|....*....|..
gi 2070976183 236 KTPMLNATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
3.77e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.63 E-value: 3.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 15 MGSSITISSNHWIL---AWTGLEINTLAIIPLISKSYHPRAIeatikyFLTQSTASALILFSSLTNAWS-TGQWDITQLN 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 91 HPTSCLLLTMAIAIKLGL*PFHF--WFPEVLQGSPMITALLLS---TLMKLPPITLLLMTSQ--SLNPTMLTTLAI--LS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSatmTLMGVYGILKMTILTQtiPIGYFGLTILAIgaFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 162 ALMGGWMGLNQTQTRKILAFSSISHLGWMII-----IITYNPHLTFLTFTLYTIMTTTVFLSLTQIKVLKLSTMLISWTK 236
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSI 316
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2070976183 237 TPMLNATVMMTLL-------SLAGLPPLTGFMPKWLIIQEL 270
Cdd:PRK06459 317 TYSKKIRNRWIELgltllasSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
5.50e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 5.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 96 LLLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITALLLSTLMKLPPITL-----LLMTSQSLNpTMLTTLAILSALMGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPApVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 170 LNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTI----MTTTVFL------------SLTQIKVL-KLStmli 232
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAhhitVQTTLFLvvglierqagssSLRRLGGLaKAS---- 367
|
170 180 190
....*....|....*....|....*....|....*.
gi 2070976183 233 swtktPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12665 368 -----PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
8.58e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 8.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 111 FHFWFPEVLQGSPMITALLLSTLMKLPPITLL-----LMTSQSLNPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 186 HLGWMIIII----TYNPHLTFLT----FTLYTIMTTTVFLSLTQIKVLKLSTMLISWTKTPMLNATVMMTLLSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIgiegSHNVGLFHLVnhafFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|.
gi 2070976183 258 TGFMPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
9.09e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 47.22 E-value: 9.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 100 MAIAIKLGL*PFHFWFPEVLQGSPMITALLLS-TLMKLPPITLLLMT-------SQSLNPTMLtTLAILSALMGGWMGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 172 QTQTRKILAFSSISHLGWM-IIIITYNphLTFLTFTLYTIMTTTVFLSLTQIKVLKL----STMLISWTK-----TPMLN 241
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVsITLVTHD--IIGLTGSIFIMLAHGIVSSLLFILVTILydrhHTRLIKYYRglsitMPIWG 394
|
170 180
....*....|....*....|....*.
gi 2070976183 242 ATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.86e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 46.36 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 107 GL*PFHFWFPEVLQGSPMITALLLSTL-MKLPPITLLLMTSQSLNP-----TMLTTLAILSALMGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 181 FSSISHLGWMII--------IITYNPHLTFLTFT--LY-----TIMTTTVFLSLTQI-------KVLKLSTMlisWTKTP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYhllnhSLFKSVLFLGAGSVwfrtghrDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 2070976183 239 MLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-194 |
2.54e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.79 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 28 LAWtglEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQ--WDITQL---NHPTSCLLLT--- 99
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 100 --MAIAIKLGL*PFHFWFPEVL-QGSPMITALLLSTLMKLPPITLLLMTSQSLNPT------MLTTLAILSALMGGWMGL 170
Cdd:PRK12561 191 flIAFGVKLPIFPLHTWLPDAHgEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAF 270
|
170 180
....*....|....*....|....
gi 2070976183 171 NQTQTRKILAFSSISHLGWMIIII 194
Cdd:PRK12561 271 AQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
3.48e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.47 E-value: 3.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 55 ATIKYFLTQSTASALILFSSLTNAWSTGQWD------ITQ-LNHPTSCLLLTMAI---AIKLGL*PFHFWFPEV-LQGSP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 124 MITALLLSTLMKLPPITLLLMTSQ------SLNPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 198 PHLTFLTFTLYTI---MTTTVFLSLTQIKVLKLST--------MLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK07363 318 TQLSLLGAVAQMIshgLILALLFHLVGIVERKVGTrdldvlngLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 2070976183 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
50-332 |
7.88e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 44.37 E-value: 7.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 50 PRAIEATIKYFLTQSTASALILFSSltnAWSTGQ--WDITQLNHPTSCLLLTMAIAI----KLGL*PFHFWFPEVLQGSP 123
Cdd:MTH00207 134 PKSLGAGMITALTNRIGDVMLLLSI---GWTLNQghWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPT 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 124 MITALLLSTLMKLPPITLLL-----MTSQSLNPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYN- 197
Cdd:MTH00207 211 PVSALVHSSTLVTAGVFLLIrfypfLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGm 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 198 PHLTFLTFTLYTIMTTTVFLSLTQIKVL-----KLSTMLISWTKTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:MTH00207 291 PKLALFHLITHALFKALLFVCAGSLIHShhhsqDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLF 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 273 QEMTPTATIITLLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKTLNTPTAILSALS 332
Cdd:MTH00207 371 YPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGA 430
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
293-340 |
8.57e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 39.55 E-value: 8.57e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2070976183 293 YLRLAYHSTITLPPNSSNHMKLWRTNKT-LNTPTAILSALSTSLLPLSP 340
Cdd:pfam06444 3 YLRLSYSTTLTLFPNTNNSKMKWRFNSTkNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
9.74e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 9.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 34 EINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQ-----LNHPTSCLLLTMAIAIKLG- 107
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 108 -----L*PFHFWFPEVLQGS-PMITALLLS----TLMKLPPITLLLMTSQSLNP---TMLTTLAILSALMGGWMGLNQTQ 174
Cdd:PRK06277 210 lygsgLPPFHTIKSDIYAKAkPFGSALLQTfskfVLVALMLVIFKLFGGLSYFPsaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 175 TRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYT----IMTTTVFLSLTQI----KVLKLSTMLISWTKTPMLNATVMM 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 2070976183 247 TLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
1.04e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.78 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 96 LLLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITALLLSTLMK------LPPITLLLMTSQSLNPTMLTTLAILSALMGGWM 168
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPPIaIAALFGALLTKvgvyaiARTFTLFFSHDTSFTHYLILILALLTIIFGVIG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 169 GLNQTQTRKILAFSSISHLGWMIIIITYNPHLTFLTFTLYTI----------MTTTVFLSLTQIKVLKLSTMLISwtKTP 238
Cdd:PRK07691 293 AVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIhdmivkaalfLLIGIMIKITGTTDLKKMGGLIK--RYP 370
|
170 180 190
....*....|....*....|....*....|
gi 2070976183 239 MLNATVMMTLLSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK07691 371 VLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-203 |
1.65e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 43.40 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 68 ALILFSSLTNAWSTGQWDITQLNHPTSCLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLL----- 142
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLirlsp 259
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070976183 143 LMTSQSLNPTMLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYN-PHLTFL 203
Cdd:MTH00211 260 LFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFL 321
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
95-192 |
2.74e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 42.70 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 95 CLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLL--LMTSQSLNPTMLTTLAI---LSALMGGWMG 169
Cdd:PRK07376 230 CILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWtgaITAFLGASIA 309
|
90 100
....*....|....*....|...
gi 2070976183 170 LNQTQTRKILAFSSISHLGWMII 192
Cdd:PRK07376 310 LTQNDIKKGLAYSTISQLGYMVM 332
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
6.36e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.74 E-value: 6.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 96 LLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPT-----MLTTLAILSALMGGWMGL 170
Cdd:PRK12649 218 ILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 171 NQTQTRKILAFSSISHLGWMIIIITYNPH------LTFLTFTLYTIMTTTVFLSLTQ-IKVLKLSTMLIS-----WTKTP 238
Cdd:PRK12649 298 RQTDIKAILAYSTISQLAYLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLVAgIVAHEAATRDIRklgglRKEMP 377
|
170 180
....*....|....*....|....*
gi 2070976183 239 MLNATVMMTLLSLAGLPPLTGFMPK 263
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSK 402
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
75-203 |
6.88e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.43 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 75 LTNAW---STGQWDITQ---LNHPTSCLLLTMAIAI--KLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLL--- 143
Cdd:MTH00066 182 LSMAWlamNTNSWELQQiflLNDNSTLPLLGLILAAagKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIrfh 261
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070976183 144 -MTSQslNPTMLTT---LAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYN-PHLTFL 203
Cdd:MTH00066 262 pLLEN--NQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFF 324
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-279 |
1.24e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.57 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 10 SLSLMMGSSITISSNhWILAWTGLEINTLAIIPLISksyHPRAIEATI--KYFLTQSTASALILFSS----LTNAWSTGQ 83
Cdd:PRK06589 123 NLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIG---HTRNNISLSggYKYLKILMISALLLFLPavilIYTKTGNLD 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 84 W-DITQLNHPTSCLLLTMAIA--IKLGL*PFHFWFPEVLQGSPMITALLLSTLM----KLPPITLLLMTSQSLNPTM--- 153
Cdd:PRK06589 199 FvSGGLFSKNQSIILLLMFIYgiAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRifa 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 154 ----LTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIII--ITYNPHLTFLTFTLYT--IMTTTVFLSLTQIKVL 225
Cdd:PRK06589 279 efnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHLVShsFAKICLFYSMGSIYSL 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2070976183 226 KLSTMLISWTKT----PMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTA 279
Cdd:PRK06589 359 KKEDQVDKLHGTsksfPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLS 416
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
11-296 |
1.66e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 40.14 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 11 LSLMMGSSITISSNHWILAWTGLEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLN 90
Cdd:PRK08377 115 LLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 91 HPTSCL----------LLTMAIAIKLGL*PFHFWFPEVLQGSPM-ITALLLSTLMK--LPPITLLLMTSQSLNP-----T 152
Cdd:PRK08377 195 QLAGTIdptvaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKagLYAMARILYLMQNANGwssvlK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 153 MLTTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMIIIITYNPHL----TFLTFTLYTIMTTTVFLSLTQIKVLKLS 228
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGYVGITLGG 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070976183 229 TMLISWT----KTPMLNATVMMTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPTATIITLLSLLSLFFYLRL 296
Cdd:PRK08377 355 TEIEKFEglgkRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
112-203 |
1.88e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 40.20 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 112 HFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSL--NPTMLTT---LAILSALMGGWMGLNQTQTRKILAFSSISH 186
Cdd:MTH00137 235 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMenNQTALTTclcLGALTTLFTATCALTQNDIKKIVAFSTSSQ 314
|
90
....*....|....*...
gi 2070976183 187 LGWMIIIITYN-PHLTFL 203
Cdd:MTH00137 315 LGLMMVTIGLNqPQLAFL 332
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
3.22e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.19 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 33 LEINTLAIIPLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQLN--HPTSCLLLTMAIAI----KL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSglHGSLKYLVFLGILFaawgKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 107 GL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNP------TMLTTLAILSALMGGWMGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 181 FSSISHLGWMIIIITYN---------------------PHLTFLTFTLYTIMTTTvfLSLTQIKVLKlstmliswTKTPM 239
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAilgsrlalegsiayifnhafaKSLFFLVAGALSYSCGT--RLLPRLRGVL--------KKLPL 371
|
250 260
....*....|....*....|....*...
gi 2070976183 240 LNATVMMTLLSLAGLPPLTGFMPKWLII 267
Cdd:PRK06525 372 VGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
19-192 |
4.48e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 19 ITISSNHWIL---AW--TGLEINTLaiipLISKSYHPRAIEATIKYFLTQSTASALILFSSLTNAWSTGQWDITQL---- 89
Cdd:PRK08168 115 LLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALwahl 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 90 -NHPTS------CLLLTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLS--------TLMKLPPITLLLMTSQSLnptmL 154
Cdd:PRK08168 191 aAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAgvvnlggfVLIRFAPLLEQAPPARWL----L 266
|
170 180 190
....*....|....*....|....*....|....*...
gi 2070976183 155 TTLAILSALMGGWMGLNQTQTRKILAFSSISHLGWMII 192
Cdd:PRK08168 267 VLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
68-203 |
5.51e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 38.68 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 68 ALILFSSLTNAWSTGQWDITQLNHPTSCLL-LTMAIAIKLGL*PFHFWFPEVLQGSPMITALLLSTLMKLPPITLL---- 142
Cdd:MTH00108 185 AMAWFLLNLNSWDLQQIFMLNPNNSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLirfh 264
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2070976183 143 -LMTSqslNPTMLTTLAILSALMGGWMG---LNQTQTRKILAFSSISHLGWMIIIITYN-PHLTFL 203
Cdd:MTH00108 265 pLMEN---NKTIQTLTLCLGAITTLFTAicaLTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFL 327
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
6.43e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.58 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 110 PFHFWFPEVLQGSPMITALLLSTLMKLPPITLLLMTSQSLNPT-----MLTTLAILSALMGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976183 185 SHLGWMIIII------TYNPHLTFLTF-------TLYTIMTTTVFLSLTQIKV------------LKLSTMLISWtktPM 239
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIyvfvlfaALFHLMNHAIFKCALFMGVgiidheagtrdiRILSGMRQLF---PK 384
|
170 180 190
....*....|....*....|....*....|...
gi 2070976183 240 LNATVMMTLLSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| |
