|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
4.31e-76 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 228.51 E-value: 4.31e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
2.10e-33 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 119.12 E-value: 2.10e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFH-FVLPFIVSAFVMIHLLFLHQTGSNNPLG----LNSNLDKIPFHPYFSFKDIMGMSITIMSLCM 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2067839449 76 LSLISPylLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
8.85e-24 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 88.86 E-value: 8.85e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2067839449 41 NPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLISPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
3.25e-18 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 74.97 E-value: 3.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHF-VLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLI 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 2067839449 80 SPYLLGDP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
4.31e-76 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 228.51 E-value: 4.31e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-115 |
1.17e-68 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 210.28 E-value: 1.17e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-115 |
4.25e-67 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 205.92 E-value: 4.25e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAIL 278
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-115 |
1.03e-66 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 205.52 E-value: 1.03e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-115 |
2.75e-66 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 204.14 E-value: 2.75e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00074 168 GFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00074 248 PNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-115 |
4.95e-65 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 201.02 E-value: 4.95e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-115 |
1.31e-64 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 199.75 E-value: 1.31e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-115 |
3.28e-61 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 191.04 E-value: 3.28e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAIL 282
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-115 |
5.23e-58 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 182.98 E-value: 5.23e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00034 167 GFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLF 246
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00034 247 PTALNDPENFIPANPLVTPPHIQPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-115 |
8.73e-49 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 159.32 E-value: 8.73e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00224 168 GFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFE 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00224 248 PNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAIL 282
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-115 |
3.82e-48 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 157.56 E-value: 3.82e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00053 168 GFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00053 248 PYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-115 |
2.75e-47 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 155.24 E-value: 2.75e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLIS 80
Cdd:MTH00022 166 GFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFA 245
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00022 246 PNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAIL 280
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-115 |
5.71e-37 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 128.13 E-value: 5.71e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMsITIMSLCMLSLIS 80
Cdd:MTH00086 156 GFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFY 234
|
90 100 110
....*....|....*....|....*....|....*
gi 2067839449 81 PYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00086 235 PFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAIL 269
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-115 |
4.81e-34 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 120.81 E-value: 4.81e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSlIS 80
Cdd:MTH00033 164 GFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IE 242
|
90 100 110
....*....|....*....|....*....|....*...
gi 2067839449 81 PY---LLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00033 243 PRietLLQDPENFIQANPLVTPVHIQPEWYFLFAYAIL 280
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
2.10e-33 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 119.12 E-value: 2.10e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFH-FVLPFIVSAFVMIHLLFLHQTGSNNPLG----LNSNLDKIPFHPYFSFKDIMGMSITIMSLCM 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2067839449 76 LSLISPylLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-115 |
1.91e-29 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 108.15 E-value: 1.91e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNL-DKIPFHPYFSFKDIMGMSITIMSLCMLSLI 79
Cdd:MTH00046 158 GFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFV 237
|
90 100 110
....*....|....*....|....*....|....*.
gi 2067839449 80 SPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:MTH00046 238 SPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAML 273
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
8.85e-24 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 88.86 E-value: 8.85e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2067839449 41 NPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLISPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
3.25e-18 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 74.97 E-value: 3.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHF-VLPFIVSAFVMIHLLFLHQTGSNNPLGLNSNLDKIPFHPYFSFKDIMGMSITIMSLCMLSLI 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 2067839449 80 SPYLLGDP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-40 |
1.73e-11 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 58.15 E-value: 1.73e-11
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTGSN 40
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
92-115 |
5.60e-11 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 54.79 E-value: 5.60e-11
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-38 |
5.98e-10 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 53.93 E-value: 5.98e-10
10 20 30
....*....|....*....|....*....|....*...
gi 2067839449 1 GFAVDNATLTRFFTFHFVLPFIVSAFVMIHLLFLHQTG 38
Cdd:pfam00033 152 SFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| petB |
CHL00070 |
cytochrome b6 |
1-43 |
7.15e-05 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 40.09 E-value: 7.15e-05
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2067839449 1 GFAVDNATLTRFFTFH-FVLPFIVSAFVMIHLLFLHQTGSNNPL 43
Cdd:CHL00070 172 SVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
69-115 |
5.84e-04 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 37.29 E-value: 5.84e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2067839449 69 TIMSLCMLSLISPYLLGDPdnftpANPLVTPVHIQPEWYFLFAYAIL 115
Cdd:CHL00058 47 TIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQIL 88
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
1-43 |
1.72e-03 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 36.23 E-value: 1.72e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2067839449 1 GFAVDNATLTRFFTFH-FVLPFIVSAFVMIHLLFLHQTGSNNPL 43
Cdd:PRK03735 180 GEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
|