protein transport protein Sec61 subunit gamma-like [Ovis aries]
preprotein translocase subunit SecE( domain architecture ID 1575)
preprotein translocase subunit SecE is an essential subunit of the Sec protein translocation channel SecYEG and it clamps together the 2 halves of SecY; may contact the channel plug during translocation
List of domain hits
Name | Accession | Description | Interval | E-value | ||
secE super family | cl00481 | preprotein translocase subunit SecE; Reviewed |
12-68 | 1.95e-23 | ||
preprotein translocase subunit SecE; Reviewed The actual alignment was detected with superfamily member PTZ00478: Pssm-ID: 469787 Cd Length: 81 Bit Score: 83.99 E-value: 1.95e-23
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Name | Accession | Description | Interval | E-value | ||
PTZ00478 | PTZ00478 | Sec superfamily; Provisional |
12-68 | 1.95e-23 | ||
Sec superfamily; Provisional Pssm-ID: 185656 Cd Length: 81 Bit Score: 83.99 E-value: 1.95e-23
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secE_euk_arch | TIGR00327 | protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; This model describes ... |
6-66 | 3.76e-11 | ||
protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; This model describes archaeal SEC61-like and eukaryotic SEC61 but not bacterial secE proteins, for which a Pfam pfam00584 (SecE) has been created. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 273016 Cd Length: 61 Bit Score: 52.46 E-value: 3.76e-11
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SecE | pfam00584 | SecE/Sec61-gamma subunits of protein translocation complex; SecE is part of the SecYEG complex ... |
12-65 | 8.26e-09 | ||
SecE/Sec61-gamma subunits of protein translocation complex; SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex. Pssm-ID: 459858 Cd Length: 55 Bit Score: 46.27 E-value: 8.26e-09
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Name | Accession | Description | Interval | E-value | ||
PTZ00478 | PTZ00478 | Sec superfamily; Provisional |
12-68 | 1.95e-23 | ||
Sec superfamily; Provisional Pssm-ID: 185656 Cd Length: 81 Bit Score: 83.99 E-value: 1.95e-23
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secE_euk_arch | TIGR00327 | protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; This model describes ... |
6-66 | 3.76e-11 | ||
protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; This model describes archaeal SEC61-like and eukaryotic SEC61 but not bacterial secE proteins, for which a Pfam pfam00584 (SecE) has been created. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 273016 Cd Length: 61 Bit Score: 52.46 E-value: 3.76e-11
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SecE | pfam00584 | SecE/Sec61-gamma subunits of protein translocation complex; SecE is part of the SecYEG complex ... |
12-65 | 8.26e-09 | ||
SecE/Sec61-gamma subunits of protein translocation complex; SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex. Pssm-ID: 459858 Cd Length: 55 Bit Score: 46.27 E-value: 8.26e-09
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secE | PRK09400 | preprotein translocase subunit SecE; Reviewed |
5-57 | 9.23e-07 | ||
preprotein translocase subunit SecE; Reviewed Pssm-ID: 236497 Cd Length: 61 Bit Score: 40.99 E-value: 9.23e-07
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BAR_3_WASP_bdg | pfam10456 | WASP-binding domain of Sorting nexin protein; The C-terminal region of the Sorting nexin group ... |
3-39 | 2.50e-03 | ||
WASP-binding domain of Sorting nexin protein; The C-terminal region of the Sorting nexin group of proteins appears to carry a BAR-like (Bin/amphiphysin/Rvs) domain. This domain is very diverse and the similarities with other BAR domains are few. In the Sorting nexins it is associated with family PX, pfam00787.13, and in combination with PX appears to be necessary to bind WASP along with p85 to form a multimeric signalling complex. Pssm-ID: 313646 Cd Length: 236 Bit Score: 33.99 E-value: 2.50e-03
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Blast search parameters | ||||
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