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Conserved domains on  [gi|2062575565|gb|QXG19444|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Drosophila nigrosparsa]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 3.98e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.12  E-value: 3.98e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  12 MTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTY 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 2062575565  92 TSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 3.98e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.12  E-value: 3.98e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  12 MTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTY 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 2062575565  92 TSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-82 1.51e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 74.00  E-value: 1.51e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575565  19 MMLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 14-82 3.66e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 65.91  E-value: 3.66e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575565  14 ISFVVMMLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:COG0838    18 LALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 3.98e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.12  E-value: 3.98e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  12 MTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTY 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 2062575565  92 TSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.21e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 108.02  E-value: 1.21e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565   1 MFSIIFIASIIMTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2062575565  81 FKFSNLLIWTYTSIIFILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 2.27e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 104.69  E-value: 2.27e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565   1 MFSIIFIASIIMTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2062575565  81 FKFSNLLIWTYTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 2.91e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 94.15  E-value: 2.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565   1 MFSIIFIASIIMTISFVVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2062575565  81 FKFSNLLIWTYTSIIFILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-115 2.04e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 81.89  E-value: 2.04e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSN-LLIWTYTSIIFILILLIGLYhEWNQ 110
Cdd:MTH00136   31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSpLLTFFWATAVLILLTLGLIY-EWLQ 109


                  ....*
gi 2062575565 111 GMLNW 115
Cdd:MTH00136  110 GGLEW 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 2.87e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 81.52  E-value: 2.87e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  34 EKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTYTSIIFILILLIGLYHEWNQGML 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 2062575565 114 NWS 116
Cdd:MTH00106  112 EWT 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 3.84e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 81.18  E-value: 3.84e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565   1 MFSIIFIASIIMTISFVVMMLASILSKKTLvDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2062575565  81 FKFSNLLIWTYTSIIFILILLIGLYHEWNQGMLNWSN 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 12-115 4.80e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 80.70  E-value: 4.80e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  12 MTISFVVMMLASILSKkTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTY 91
Cdd:MTH00113   11 LALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLT 89

                          90       100
                  ....*....|....*....|....
gi 2062575565  92 TSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00113   90 WATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 32-115 2.17e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 79.27  E-value: 2.17e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM---IVIFKFSNLLIWtytSIIFILILLIGLYHEW 108
Cdd:MTH00069   29 DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTPTNTLFW---STLILILLTLGLIYEW 105


                  ....*..
gi 2062575565 109 NQGMLNW 115
Cdd:MTH00069  106 IQGGLEW 112
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 15-115 2.10e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 76.47  E-value: 2.10e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  15 SFVVMMLASILSK--KTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNllIWTYT 92
Cdd:MTH00203   12 LLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS--LSLLL 89

                          90       100
                  ....*....|....*....|...
gi 2062575565  93 SIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00203   90 AFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-82 1.51e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 74.00  E-value: 1.51e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575565  19 MMLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 14-82 3.66e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 65.91  E-value: 3.66e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575565  14 ISFVVMMLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:COG0838    18 LALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.38e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 64.35  E-value: 1.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLiWTYTSIIFILILLIGLYHEWNQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLF-GFWVMYLFLIILTIGLIYEWVKG 113


                  ....
gi 2062575565 112 MLNW 115
Cdd:MTH00055  114 GLEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 17-116 7.68e-14

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 62.57  E-value: 7.68e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  17 VVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTYTSIIF 96
Cdd:PRK06602   23 ILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFVEAMIFI 102

                          90       100
                  ....*....|....*....|
gi 2062575565  97 ILILLIGLYhEWNQGMLNWS 116
Cdd:PRK06602  103 LVLLVGLVY-LWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 13-115 1.94e-13

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 61.23  E-value: 1.94e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  13 TISFVVMMLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWtYT 92
Cdd:MTH00018   12 VLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGF-WT 89

                          90       100
                  ....*....|....*....|...
gi 2062575565  93 SIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00018   90 MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 3.28e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 56.09  E-value: 3.28e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTYTSIIFILILLIGLYhEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLIVLAIGLAY-EWIKG 118


                  ....
gi 2062575565 112 MLNW 115
Cdd:MTH00030  119 GLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 17-115 3.47e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 40.04  E-value: 3.47e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  17 VVMMLASILSKKTLVDREKSSPFECGFDPKSSSRLP--FSLRFFLITIIFLIFDVEIALILPMIVifKFSNLLIWTYTSI 94
Cdd:PRK07928   19 VVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAV--SFDALGVFGLVEM 96

                          90       100
                  ....*....|....*....|..
gi 2062575565  95 IFILILLIGLY-HEWNQGMLNW 115
Cdd:PRK07928   97 ALFMLTVFVAYaYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
16-82 7.57e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 39.26  E-value: 7.57e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575565  16 FVVMMLASILSKK-TLVDRE--KSSPFECGFDP-KSSSRLpfSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:PRK08489   25 FLTTRLARFISRKlAQKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFK 93
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-82 1.03e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 38.96  E-value: 1.03e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2062575565  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFK 82
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYD 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-77 5.73e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.80  E-value: 5.73e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2062575565  26 SKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM 77
Cdd:MTH00060   28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNM 79
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 35-89 5.21e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 34.10  E-value: 5.21e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2062575565  35 KSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIW 89
Cdd:MTH00092   34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISFF 88
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-116 7.99e-03

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 33.81  E-value: 7.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575565  34 EKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIVIFKFSNLLIWTyTSIIFILILLIGLYHEWNQGML 113
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFI-EALIFVLILIVGLVYAWRKGAL 117


                  ...
gi 2062575565 114 NWS 116
Cdd:CHL00022  118 EWS 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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