|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
1.57e-177 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 503.53 E-value: 1.57e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYWTVQILLFFISFIFLISNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 81 KLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 161 VMNKIGSMNFYLMNNYMFNYDLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQL 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 241 VNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANV 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 321 SYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2062575221 401 FSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILKSDSCMLW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
39-446 |
4.48e-130 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 381.88 E-value: 4.48e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 39 NNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFES 118
Cdd:MTH00150 7 YSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 119 SLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLM---NNYMFNYDLLYFCLLSAFLVKM 195
Cdd:MTH00150 87 SLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIsslRKLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 196 PMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIA 275
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 276 YSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANM 355
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 356 AAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLL 435
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 2062575221 436 ILKSDSCMLWL 446
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-446 |
3.16e-126 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 373.31 E-value: 3.16e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYWTVQI---LLFFISFIFLISNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 78 SVNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 158 IFYVMNKIGSMNFyLMNNYMFNYDLLY----FCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR 233
Cdd:MTH00014 161 ILLIFYTNNSLSM-LMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 234 VISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSG 313
Cdd:MTH00014 240 MSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 314 LFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAA 393
Cdd:MTH00014 320 LFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2062575221 394 YTLYLYSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILKSDSCMLWL 446
Cdd:MTH00014 400 YSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-443 |
5.12e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 370.08 E-value: 5.12e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 2 LKLVFFLVFLSPICFINNIYWTVQILLFFISFIFLISN--NFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFfsNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 80 NKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 160 YVMNKIGSMNFYLMNNYMFNYD---LLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylfLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 237 FLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 317 LANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2062575221 397 YLYSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILKSDSCM 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
4.14e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 355.27 E-value: 4.14e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFI--NNIYWTV----QILLFFISFIFLISNNFMNYWSeiSYFLGCDMLSYGLVLLSLWICSLMLL 74
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskPKFLWTNtttySLLIALLSLQWLKPPYYPTKNL--TQWLGIDQISAPLLVLSCWLLPLMIL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 75 ASEsvNKLNN----YKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLV 150
Cdd:MTH00124 79 ASQ--NHLQHeplqRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLIS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 151 SLPMLIGIFYVMNKIGSMNFYLM---NNYMFNY---DLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIML 224
Cdd:MTH00124 157 SLPLLIAILYLHNQTGTLSLPMLqltHPTLTNSwtnLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 225 KLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLM 304
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 305 IAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIML 384
Cdd:MTH00124 317 IAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILT 396
|
410 420
....*....|....*....|...
gi 2062575221 385 SLLSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00124 397 GLATLITASYTLYMFLSTQRGTL 419
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.18e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 336.50 E-value: 1.18e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYW---TVQILLFFISFI----FLISNNFMNYwseISYFLGCDMLSYGLVLLSLWICSLML 73
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWlwtLTTTNSLIIAFLslmwFNLPSETMNF---TNKYFGIDQISSPLLILTCWLLPLMI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 74 LASESVNKLN--NYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVS 151
Cdd:MTH00068 78 LASQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 152 LPMLIGIFYVMNKIGSMNFYLMNNYMFNYDLLY-------FCLLsAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIML 224
Cdd:MTH00068 158 LPLLIALLILQNSLGSLSLILLELMSPMQLMTYtnkiwwlACLL-AFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 225 KLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLM 304
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 305 IAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIML 384
Cdd:MTH00068 317 ISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILIT 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2062575221 385 SLLSFFSAAYTLYLYSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILK 438
Cdd:MTH00068 397 GLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
4.14e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 335.02 E-value: 4.14e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFI--NNIYWTVQI----LLFFISfIFLISNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLL 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIvpKNKLWPISIsqssLISLLS-LFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 75 ASesVNKLNNYKNLF----LLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLV 150
Cdd:MTH00044 80 AS--INHLSNNSPNNqrtfISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 151 SLPMLIGIFYVMNKIGSMNFYLMN------NYMFNYDLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIML 224
Cdd:MTH00044 158 SLPLLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 225 KLGGYGLLRVISFLQLVNLKY-SFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTL 303
Cdd:MTH00044 238 KLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALIL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 304 MIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIM 383
Cdd:MTH00044 318 MIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPI 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575221 384 LSLLSFFSAAYTLYLYSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILKSDSCML 444
Cdd:MTH00044 398 IGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
4.25e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 327.23 E-value: 4.25e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFI--NNIYW----TVQILLFFISFIFLISNNFMNYWSEISYFLgcDMLSYGLVLLSLWICSLMLL 74
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWinttTYSLLISLISLLLLNQPNDNSLNFSLLFFS--DSLSTPLLILTTWLLPLMLM 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 75 ASES--VNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSL 152
Cdd:MTH00110 79 ASQHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 153 PMLIGIFYVMNKIGSMNFYLMNNYMFNYD------LLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKL 226
Cdd:MTH00110 159 PLLVALLYIQNNLGSLNFLLLQLWAQPLPnswsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 227 GGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIA 306
Cdd:MTH00110 239 GGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 307 HGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSL 386
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420
....*....|....*....|.
gi 2062575221 387 LSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
6-442 |
4.66e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 324.20 E-value: 4.66e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 6 FFLVFLSPICFINNIYWTVQILLFFISFIFLI--SNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKLN 83
Cdd:MTH00206 7 IMLLLMTILSKKKWLWRSTTFFSFLIALLFLLwfKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 84 --NYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYV 161
Cdd:MTH00206 87 piNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 162 MNKIGSMNFYLMNNYM---FNYDLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL 238
Cdd:MTH00206 167 QNSLGSLSLYILYFSKlttWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILIL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 239 QLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA 318
Cdd:MTH00206 247 GPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 319 NVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYL 398
Cdd:MTH00206 327 NLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2062575221 399 YSFSQHGKLFSGVYPFSGGKIREYLLMLLHWLPLNLLILKSDSC 442
Cdd:MTH00206 407 FVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.12e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 292.24 E-value: 2.12e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYWTVQILLFFISFIFLISNNFMNY-----WSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNlsetgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 76 SES--VNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLP 153
Cdd:MTH00127 81 SQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 154 MLIGIFYVMNKIGSMNFYLMNNYMFNYDLLYF-------CLLsAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKL 226
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWAdklwwagCLL-AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 227 GGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIA 306
Cdd:MTH00127 240 GGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 307 HGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSL 386
Cdd:MTH00127 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGL 399
|
410 420
....*....|....*....|.
gi 2062575221 387 LSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00127 400 GTLITAGYSLYMFLMTQRGPL 420
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
2.82e-68 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 224.96 E-value: 2.82e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKlnNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIK--KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIF--YVMNKIGSMNFYLMNNYMFNYD---LLYFCLLSAFLVKMPMFLVHL 202
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILalYFLAGALTFDIAELAAAPLPLTaqlLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSH 281
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 282 MGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTL 361
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 2062575221 362 NLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
1.44e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 214.87 E-value: 1.44e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYD---- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 182 --LLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVL 259
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 260 VSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA-NVSYERLGSRSLLINKGLLN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2062575221 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
5.67e-64 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 213.91 E-value: 5.67e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKlnNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK--KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYV----MNKIGSMNFYLMNNYMFNYD---LLYFCLLSAFLVKMPMFLV 200
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGvqyWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 201 HLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 280 SHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2062575221 360 TLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
7.05e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 205.68 E-value: 7.05e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYDLL 183
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 184 YFCLLSAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLVNLKYSFVWISISLVGGVL 259
Cdd:MTH00204 209 KWLLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 260 VSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 340 MPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
1.02e-58 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 199.78 E-value: 1.02e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASEsvNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 128 LGWGyQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGsMNFYLMNNYMFNYD-----LLYFCLLSAFLVKMPMFLVHL 202
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-GTFDLLELLNLPLPfgvqtWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIsfLQL---VNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN--LPLfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 280 SHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2062575221 360 TLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
4.73e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 195.27 E-value: 4.73e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYDL 182
Cdd:MTH00217 126 FTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 183 LYFCLLSAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLVNLKYSFVWISISLVGGV 258
Cdd:MTH00217 205 QYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 259 LVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVI 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575221 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00217 365 TMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
104-398 |
2.40e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 172.80 E-value: 2.40e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLM--NNYMFNY 180
Cdd:MTH00226 148 FSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLasCSHVVSE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 181 DLLYFCLLSAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLVNLKYSFVWISISLVG 256
Cdd:MTH00226 227 QTQKWIFLGIFLamaVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNLAPAVIAMGIVG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 257 GVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:MTH00226 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGL 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2062575221 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYL 398
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-417 |
3.60e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 164.31 E-value: 3.60e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 26 ILLFFISFIFLISNNFMnyWSEISYFlgcdMLSYGLVLLSLwicslMLLASESVNKLNNYKNLFLLNIVLLLLLLVLTFS 105
Cdd:MTH00094 12 FFLFLMFFSFLMFNNYS--WSGLFFF----FDSFVFVLLIF-----MMVFILGLVLLSEKNFNLLILSNLLILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNkigsMNFYLMNNYMFNYDLLYF 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF----FFSLCYFDFFLSWEMFFI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 186 CLLSaFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVnlkYSFVWISISLVGGVLVSLVCL 265
Cdd:MTH00094 157 LSLS-FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 266 RQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTL 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2062575221 346 WWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYPFSGG 417
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-375 |
7.74e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 152.11 E-value: 7.74e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKLNNyknLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPR---LFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYL----MNNYMFNYDLL-YFCLLSAFLVKMPMFLVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYPLALELLlYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSH 281
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 282 MGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLLSS-ANMAAPPT 360
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPGM 365
|
330
....*....|....*
gi 2062575221 361 LNLLGEISLLNSIVS 375
Cdd:PRK12561 366 SGFVSELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-403 |
1.20e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.90 E-value: 1.20e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 55 DMLSYGLVLLSLWICSLMLLASESVNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYqP 134
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-K 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 135 ERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYD-----LLYFCLLSAFLVKMPMFLVHLWLPKAHV 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDpglllAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 210 EAPVSGSMILAGIMLKLGGYGLLRVIS--FLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLA 287
Cdd:COG0651 234 AAPSPVSALLSGLLTKVGVYAILRVLTllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 288 GLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEI 367
Cdd:COG0651 314 GLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
330 340 350
....*....|....*....|....*....|....*..
gi 2062575221 368 SLLNSIV-SWSWMTMIMLSLLSFFSAAYTLYLYSFSQ 403
Cdd:COG0651 394 LLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-358 |
1.36e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 134.69 E-value: 1.36e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 52 LGCDMLSYGLVLLSLWICSLMLLASESVNKlnNYKNLFLLNIVLLLLLLVLtFSSMNLFMFYLFFESSLIPTLFLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTR--NSRLFYFLMLAMYSGQIGL-FSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 132 YQpERLQAGVYLLFYTLLVSLPMLIGIFyvmnkigSMNFYLMNNYMFNYD-------------LLYFCLLSAFLVKMPMF 198
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGSNEPTLNFEtlanqsypvaleiLFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 199 LVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvISFLQLVNLKYSFV-WISIslVGGVLV---SLVCLRQTDLKSLI 274
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-INMELLPHAHSIFSpWLVI--VGAIQIiyaASTSLGQRNLKKRI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 275 AYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSAN 354
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMAS 385
|
....
gi 2062575221 355 MAAP 358
Cdd:CHL00011 386 LALP 389
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-368 |
4.55e-33 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 130.59 E-value: 4.55e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSLWICSLMLLAS-ESVNKLNNYknlfLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSdESIQRPRFY----YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 127 ILGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYD-----LLYFCLLSAFLVKMPMFLVH 201
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPlstqlLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVC-LRQTDLKSLIAYSSVS 280
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 281 HMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385
|
....*...
gi 2062575221 361 LNLLGEIS 368
Cdd:PRK06473 386 PGMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-358 |
2.24e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 128.67 E-value: 2.24e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 52 LGCDMLSYGLVLLSLWICSLMLLASESVNklnnYK-NLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGW 130
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVT----FKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 131 GYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMN----NYMFNYDLL-YFCLLSAFLVKMPMFLVHLWLP 205
Cdd:PRK02546 159 GGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGLGFQLLcYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 206 KAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGI 284
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575221 285 VLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAP 358
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-365 |
5.25e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 110.19 E-value: 5.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 48 ISYFLGCDMLSYGLVLLSlwiCSLMLLASESVNKLNNYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMN----NYMFNYDLLYFC-LLSAFLVKMPMFLVHL 202
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAistqNLSLNTQLILLTgLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVisFLQLVNLKYSFVWISISLVGGVLV---SLVCLRQTDLKSLIAYSSV 279
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 280 SHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAG 384
|
....*.
gi 2062575221 360 TLNLLG 365
Cdd:PRK07363 385 IPGLVG 390
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-398 |
1.87e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 102.65 E-value: 1.87e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYDLL 183
Cdd:PRK08375 123 LLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTV 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 184 ----YFCLLsAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI------SFLQLVNLKYSFVWI-SI 252
Cdd:PRK08375 202 vtafGFVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLaLL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 253 SLVGGVLVSLVclrQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLI 332
Cdd:PRK08375 281 SMLVGSLAALG---QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSE 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575221 333 NKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVS-WSWMTMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08375 358 LSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
103-370 |
1.20e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 93.45 E-value: 1.20e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 103 TFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYDL 182
Cdd:MTH00062 87 CFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLI 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 183 LYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLkysFVWISISLVGGVLVSL 262
Cdd:MTH00062 167 VYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLI 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 263 VCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPA 342
Cdd:MTH00062 244 TACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLV 323
|
250 260
....*....|....*....|....*...
gi 2062575221 343 MTLWWFLLSSANMAAPPTLNLLGEISLL 370
Cdd:MTH00062 324 LRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
26-391 |
2.55e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 90.56 E-value: 2.55e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 26 ILLFFISFIFLISN----NFMNYWSEISYFLGCDMLSYG-LVLLSLWICSLMLLASESVNKL--NNYKNLFLLNIVLLLL 98
Cdd:PRK08667 43 LLLFAGSLQLFTGNpldiPLWGIAPGLDITFHIDRLAAFfIILIGLVSLCVAIYSLGYNEHMssNERANLLSALTALFIL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 99 LLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMF 178
Cdd:PRK08667 123 SMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 179 NYDLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGV 258
Cdd:PRK08667 203 ILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 259 LVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLM-----------IAHGLCSSGLFCLANVSYERLGS 327
Cdd:PRK08667 283 LGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGT 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575221 328 RSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSI-----VSWSWMTMIMLSLLSFFS 391
Cdd:PRK08667 363 RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-315 |
1.16e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.43 E-value: 1.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPTLFLILgWGYQPERLQAGVYLLFyTLLVSLPMLIGIFYVMNKIGSMNF-----YLMNNYMF 178
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFadisqGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 179 NYDLLYFCLLSAF-LVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWIS------ 251
Cdd:PRK08668 193 GFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfn 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575221 252 --ISLVGGVLV---SLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:PRK08668 273 yiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-399 |
1.31e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 85.02 E-value: 1.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 4 LVFFLVFLSPICFINNIYWTVQILLFfisfiflisnNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKLN 83
Cdd:PRK12667 40 LVSLITLILSILLFIQVYSSNKPIVY----------LFGGWPAPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 84 NYKNLFLLNIVLLLLLLVLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMN 163
Cdd:PRK12667 110 SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 164 KIGSMNFYLMNNYMFNYD--------------LLYFCLLS--AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLG 227
Cdd:PRK12667 190 TFGTLNMADLSAKIRGLSfpltgglagnpplaLGVALALAlwAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVG 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 228 GYGLLRVI-------SFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGS 300
Cdd:PRK12667 270 AYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAA 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 301 YTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMT 380
Cdd:PRK12667 350 LFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYL 429
|
410 420
....*....|....*....|....*.
gi 2062575221 381 MIM-------LSLLSFFSAAYTLYLY 399
Cdd:PRK12667 430 PALvlliasaISLVGYFRAWYSLFFG 455
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-398 |
5.86e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 79.76 E-value: 5.86e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNF----YLMNNYMFNYDLL 183
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 184 YFCLL-SAFLVKMPMFLVHLWLPKAHVEAPVSGSMILagIMLKLGG-YGLLRVISFLQLVNLKYSFV-WISI-----SLV 255
Cdd:PRK08376 222 ALALFiAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVgWVIIilgclTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 256 GGVLVSLVclrQTDLKSLIAYSSVSHMGIVLAGL---------LTMTYWG---LCGSYTLMIAHGLCSSGLFCLANVSYE 323
Cdd:PRK08376 300 VGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIY 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 324 RLGSRSLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN------LLGEIS-LLNSIVSWSWMTMIMLSLLSFFSAAYTL 396
Cdd:PRK08376 377 ETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTA 455
|
..
gi 2062575221 397 YL 398
Cdd:PRK08376 456 FF 457
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
191-362 |
5.35e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 77.24 E-value: 5.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 191 FLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLVNLKYSFVWISISLVGGVLVSLVCLRQTD 269
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 270 LKSLIAYSSVSHMGIVLAGL-LTMTY----------WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGLgLAMVFiaygmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180
....*....|....*....|....
gi 2062575221 339 FMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK06521 380 RMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-324 |
1.08e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 75.76 E-value: 1.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 103 TFSSMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFylmnNYMFNYDL 182
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF----SGLATADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 183 LYFCLL-SAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGgvlvS 261
Cdd:PRK07234 185 EAFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----V 260
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2062575221 262 LVCLRQTDLKSLIAYSSVSHMGIVLAGLLTmtywglCGSYTLmiAHGLCSSGLFCLANVSYER 324
Cdd:PRK07234 261 LFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSR 315
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
2.03e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 75.16 E-value: 2.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 185 FCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-----SFLQLVNLKYSFVWISISLVGGVL 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 260 VSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575221 340 MPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIV-SWSWMTMIMLSLLSFFSAAYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-370 |
2.35e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.92 E-value: 2.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 103 TFSSMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYD- 181
Cdd:PRK12665 127 AFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPs 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 182 ----LLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLVNLkysFVWISI- 252
Cdd:PRK12665 206 gtrtALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALl 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 253 SLVGGVLVSLVclrQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLI 332
Cdd:PRK12665 283 TMVVGILGAIA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*....
gi 2062575221 333 NKGLLNFMPAMTLwWFLLSSANMAA-PPTLNLLGEISLL 370
Cdd:PRK12665 360 LGGLAKASPLLAV-LFFVPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-396 |
2.47e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.38 E-value: 2.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 188 LSAFlVKMPMFLVHLWLPKAHVEA-PVSgSMILAGIMLKLGGYGLLRvISFLQLVNLKYSFVWISISLVGGVLVSLVCLR 266
Cdd:PRK12650 216 VAAF-TKSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLR-FSPVFHDVAVWNWLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 267 QTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLW 346
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFV 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575221 347 WFLLSSANMAA-PPTLNLLGEISLLNSIV------SWSWMTMIMLSLLSFFSAAYTL 396
Cdd:PRK12650 372 SVTIAALSMAAvPPLFGFVSKEGMLTAFLeapggnAGVVLLLVGAALGAVFTFAYSA 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-398 |
3.35e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.32 E-value: 3.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 187 LLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQL--VNLKYSFVWISISLVGGVLVSLVC 264
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 265 LRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2062575221 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVSWS-WMTMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-392 |
1.04e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.57 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 187 LLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR--VISFLQLVNLKYSFVWISISLVGGVLVSLVC 264
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 265 LRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAmT 344
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPL-T 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2062575221 345 LWWFLLSSANMA-APPTLNLLGEISLLNSIVS---WSWMTMIMLSLLSFFSA 392
Cdd:PRK06458 379 GWGLMLGALAIAgMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAA 430
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-84 |
1.21e-10 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 58.30 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYW-----TVQILLFFISFIFLISNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....*....
gi 2062575221 76 SESVNKLNN 84
Cdd:pfam01059 81 SQKHLKSEP 89
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
106-362 |
2.39e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 62.85 E-value: 2.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG--IFYVMNKIGSMNFYLMNNYMFNYDLL 183
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGfiMLYIMTGTNNITEILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 184 Y----FCLLSAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLVNLkYSFVWISISLVGGV 258
Cdd:PRK12646 209 FipmiFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLGLSNM-YIYIVTFVGLITML 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 259 LVSLVCLRQTDLKSLIAYSSVSHMGIVLA------GLLTMTYWGLCGSYTL--------MIAHGLCSSGLFCLANVSYER 324
Cdd:PRK12646 287 FGSITALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHE 366
|
250 260 270
....*....|....*....|....*....|....*...
gi 2062575221 325 LGSRSLLINKGLLNFMPAMTLwWFLLSSANMAAPPTLN 362
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-401 |
4.89e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.37 E-value: 4.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 50 YFLGCDMLSYGLVLLS----LWICSLML-LASESVNKLNNYKNLFLLNIVLLLLLLVLTFSSmNLFMFYLFFESSLIPTL 124
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLligfLWICALLYtPKYLAINNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 125 FLIlGWGYQPERLQAGV-YLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYDLLYFCLLSAFLVKMPMFLVHLW 203
Cdd:PRK06589 154 FLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 204 LPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLVNLKYSFVW-ISISLVGGVLVSLVCLRQTDLKSLIAYSS 278
Cdd:PRK06589 233 LPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsYLQRIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYST 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 279 VSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAP 358
Cdd:PRK06589 313 ISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIP 392
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2062575221 359 PTLNLLGEISLL-----NSIVSWSWMTMIMLSLLSFFSAAYTLYLYSF 401
Cdd:PRK06589 393 IFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-421 |
7.45e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 60.94 E-value: 7.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 187 LLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVW--ISISLVGGVLVSLVC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 265 LRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2062575221 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLL-SFFSAAYTLYLYsfsqHGKLFSGvypfSGGKIRE 421
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGaSVVEAVYYFRLI----HTMWFKG----EGERIRE 441
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-397 |
2.17e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.94 E-value: 2.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 108 NLFMFYLFFEsslIPTLFLILGWGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNY 180
Cdd:PRK12644 127 NLLLLYVFWE---LTTVLSFLLIGHYAERaasrraaLQA----LLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTG 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 181 DLL---YFCLLSAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisflqlvnLKYSF----VWISI 252
Cdd:PRK12644 200 PAVsvaVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR---------LAPGFadvpVWRPT 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 253 SLVGGVLVSLV----CLRQTDLKSLIAYSSVSHMG--IVLAGLLT--MTYWGLcgsyTLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK12644 270 VLVLGLATMLLggwrALRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAALFLVVGIIDHS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 325 LGSRSLLINKGLLNFMPAMtLWWFLLSSANMAA-PPTLNLLGEISLLNSIV------SWSWMTMIMLSLLSFFSAAYTLY 397
Cdd:PRK12644 346 TGTRDIRKLSGLGRRQPVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-330 |
3.29e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 55.73 E-value: 3.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 104 FSSMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNF--------YLMNN 175
Cdd:PRK12663 125 FLTGDLFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMahiamrlnDMGDT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 176 YMFNydLLYFCLLSAFLVKMPMFLVHlWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVN---LKYSFVWIS- 251
Cdd:PRK12663 204 ATLT--TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQErelLHPLLATMAa 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575221 252 ISLVGGVLVSLVclrQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSL 330
Cdd:PRK12663 281 ITMVIGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSL 356
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
3.51e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.46 E-value: 3.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFN------YD 181
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTilssplLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 182 LLYFCLLSAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLVNLKYSFVwISISLVGGVLV 260
Cdd:COG1009 212 LILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFALSPVWLTVV-AIIGAITALFA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 261 SLVCLRQTDLKSLIAYSSVSHMGIVLAGLltmtywGLcGSYT----LMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:COG1009 290 ALIALAQTDIKRVLAYSTVSQLGYMFLAL------GV-GAYVaalfHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575221 337 LNFMPAmTLWWFLLSSANMAA-PPTLNLLGEISLLNSIV---SWSWMTMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1009 363 RKKMPI-TAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
105-394 |
1.21e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.50 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 105 SSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNYMFNYD--- 181
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGans 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 182 -LLYFCL---LSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILA--------GIMLKLGGYGLLRVISFLQLVnlkysFVW 249
Cdd:COG1007 200 pLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAtapkiaafAALLRLLVEAFPGLAADWQLL-----LAV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 250 ISI-SLVGGvlvSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF-CLANVSYERLGS 327
Cdd:COG1007 275 LAVlSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2062575221 328 RSLLINKGLLNFMP----AMTLwwFLLSSANMaaPPTLNLLGEISLLNSIVS--WSWMTMIMLsLLSFFSAAY 394
Cdd:COG1007 352 EEIEDLAGLARRSPllalAMTI--FLLSLAGI--PPTAGFFGKFYVFSAAVEagLYWLAVIAV-LNSVISAYY 419
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
181-393 |
1.32e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 50.36 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 181 DLLYFCLLSAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVL 259
Cdd:PRK06525 207 YLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLY 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 260 VSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTY---WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:PRK06525 286 GFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGV 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLL---NSIVSWSWMTMIMLSLLSFFSAA 393
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFaagFELSVEYWILLPAMVLLLIESVA 425
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
1.91e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.21 E-value: 1.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvisfLQLVNLKYSFVWISISLVGGVLVSLV----CLRQTDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILT----LSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 276 YSSVSHMGIVLAGL-----------LTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 2062575221 345 LwWFLLSSANMAAPPTLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
187-315 |
3.30e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.05 E-value: 3.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 187 LLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMlKLGGYG-LLRV--ISFLQLVNLKYSFVWIsISLVGGVLVSLV 263
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLlvVAFGGLSEDWQQVLAI-IAIASMLVGNLA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2062575221 264 CLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:PRK05777 288 ALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-365 |
3.51e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 49.53 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTLFLIlgwGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYVMNKIGSMN---FYLMNN 175
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSlseLLASGD 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 176 YMFN---YDLLYFCLLSAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisfLQLVnLKYSFVW-I 250
Cdd:PRK12647 187 VIREhplYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPV-LGGTPLWqT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 251 SISLVGG---VLVSLVCLRQTDLKSLIAYSSVSHMGIV--LAGLLTMTYWGLCGSYtlMIAHGLCSSGLFCLANVSYERL 325
Cdd:PRK12647 261 ILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLvmLLGLGSELAIKAAVLF--LVAHSLYKGALFMVAGIIDHET 338
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2062575221 326 GSRSLLINKGLLNFMPaMTLWWFLLSSANMAA-PPTLNLLG 365
Cdd:PRK12647 339 GTRDITKLGGLRRAMP-ITAAAALLAALSMAGlPPLFGFLA 378
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-315 |
9.42e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 47.64 E-value: 9.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 1 MLKLVFFLVFLSPICFINNIYWTVQILLFFISFIFLISNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVN 80
Cdd:TIGR01770 18 LLYGLFYSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 81 KLNNYKNLFLLNIVLLLLLLVLtfSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFY 160
Cdd:TIGR01770 98 KINKFEFYILLLFALLGIFLLV--SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 161 VMNKIGSMNF----YLMNNYMFNYDLLYFCL---LSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLR 233
Cdd:TIGR01770 176 IYGFTGSLNFedllLFLSNGMLNISLLLLGIvliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVFL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 234 VISFLQLVNlkYSFVWISISLVGGVLV----SLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGL 309
Cdd:TIGR01770 255 RLFLYILFG--FSEAWQIFLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYAL 332
|
....*.
gi 2062575221 310 CSSGLF 315
Cdd:TIGR01770 333 MSLGAF 338
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
191-393 |
3.78e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.94 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 191 FLVKMPM--FLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVNLKYSFVWI----SISLVGGVLVSLVC 264
Cdd:PRK06459 168 FIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTIlaigAFSILFGALYAYVS 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 265 lrqTDLKSLIAYSSVSHMGIVLA--GLLTMTY--------WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINK 334
Cdd:PRK06459 248 ---ENVKGLLAFSTIENNGAILValGLYMVTKqlitsiehFSLITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRN 324
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575221 335 GLlnfmpaMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFFSAA 393
Cdd:PRK06459 325 RW------IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-315 |
5.22e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 45.62 E-value: 5.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 182 LLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMlklggygllRVISFLQLVNLKY-SFVWISISLVGGVLV 260
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIP---------KFTVYILLTSLVItSKLLLSVAIISLVVG 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2062575221 261 SLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-288 |
1.77e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 43.73 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 109 LFMFYLFFESSLIPTLFLILGWGyQPERLQAGV-YLLFYTLLVSLpMLIGIFYVMNKIGSMNFYLMNNYMFNYDLLyfcL 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTAAWL---I 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 188 LSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLVnlkysfVWI-SISLVGGVLVSLVclr 266
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIgAAMAVYGVFFALL--- 260
|
170 180
....*....|....*....|..
gi 2062575221 267 QTDLKSLIAYSSVSHMGIVLAG 288
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAG 282
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
106-289 |
1.90e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 43.76 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVY-LLFYTLLVSLPMLIGI--FYVMN------KIGSMNFYLMNNY 176
Cdd:PRK12645 129 SDNLIVLYLFWELTSISS-FLLISYWYEREASRYGAQkSMLITVFGGLSMLGGFilLYIMTgsfsirEMIANADEIQNSP 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 177 MFNYDLLYFcLLSAFlVKMPMFLVHLWLPKAhVEAPV-------SGSMILAGIMLklggygllrVISFLQLVNLKYSFVW 249
Cdd:PRK12645 208 LFIPAMILI-LLGAF-TKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL---------VARFTPIFAGSQVWFW 275
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2062575221 250 IsISLVGGVLV---SLVCLRQTDLKSLIAYSSVSHMGIVLAGL 289
Cdd:PRK12645 276 T-VTLVGLITLfwgSLNAVKQTDLKGILAFSTVSQLGLIMSLL 317
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-362 |
1.22e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.35 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGS------MNFYLMNNYMFN 179
Cdd:PRK12649 130 SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTydiatiLQDSELIENIKG 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 180 YDLLYFCLLSAFL---VKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQlvNLKYSFVWIS-ISL 254
Cdd:PRK12649 210 HPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgTGM 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 255 VGGVLVSLVCLRQTDLKSLIAYSSVSHmgivLAGLLTMTYW--------GLCGSYTLMIAHGLCSSGLFCLANVSYERLG 326
Cdd:PRK12649 287 ITMVLAGFLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAA 362
|
250 260 270
....*....|....*....|....*....|....*.
gi 2062575221 327 SRSLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK12649 363 TRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
108-398 |
1.41e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.79 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLpMLIGIFYVMNKIGSMNFYLMNNYMFNyDLLYFCL 187
Cdd:PRK06277 121 DIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDIHNALLV-NPTSPVI 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 188 LSAFLVKMPMFLVHLWLPKAHV-------EAPVSGSMILAG------IMLKLGGYGLLRVISFLQLVNLkysfVWISISL 254
Cdd:PRK06277 199 YGGLLLLIFGLLYGSGLPPFHTiksdiyaKAKPFGSALLQTfskfvlVALMLVIFKLFGGLSYFPSAQG----VLIALSV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 255 VGGVLVSLVCLRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINK 334
Cdd:PRK06277 275 LAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLG 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 335 GLLNFMPAMTLwWFLLSSANMAAPPTLN------LLGEISLLNSIVSWSwMTMIMLSLLSFFSAAYTLYL 398
Cdd:PRK06277 355 GLLPVMPVVAF-MVLCAKLAISGVPPFNgfqsklMLAQAAMQANMPELA-IIMIIVSIGTFVSMMKAFYL 422
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-318 |
2.79e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 39.83 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 187 LLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVISFLQLVNLKYSFVWISISLVGGVLVSLVC-- 264
Cdd:PRK12666 216 LLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFga 294
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575221 265 ---LRQTDLKSLIAYSSVSHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA 318
Cdd:PRK12666 295 igvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
172-390 |
7.08e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 38.33 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 172 LMNNYMFNYDLLYFCLLSAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGImLKLggYGLLRVISFLQLVNLKYSFVWIS 251
Cdd:MTH00144 75 LIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTW-QKV--APLFLLSNFLDLYWLAYLLCVIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575221 252 I--SLVGGVLVslvcLRQTDLKSLIAYSSVSHMGIVLAGLltmtywgLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRS 329
Cdd:MTH00144 152 VlsALVGSIGG----LNQTQVRALLAYSSISHTGWMLVAI-------LHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM 220
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575221 330 LLINKGLLNFMPAMTLWWFLLSSANMaaPPTLNLLGEISLLNSIVSWSWMTMIMLSLLSFF 390
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGL--PPFLGFCSKLLVLISSMESSPLLLILLLLLGSL 279
|
|
| |
