hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Prolamin_like super family | cl05275 | Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be ... |
46-113 | 1.66e-03 | ||
Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be expressed in the plant embryo sac and to be regulated by the Myb98 transcription factor. Computational analysis has revealed that members are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, this domain contains only six conserved Cys residues that may form three pairs of disulfide bonds. The domain may have a potential function in lipid transfer or protection during plant embryo sac development and reproduction. The actual alignment was detected with superfamily member pfam05617: Pssm-ID: 471214 Cd Length: 70 Bit Score: 34.73 E-value: 1.66e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Prolamin_like | pfam05617 | Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be ... |
46-113 | 1.66e-03 | ||
Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be expressed in the plant embryo sac and to be regulated by the Myb98 transcription factor. Computational analysis has revealed that members are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, this domain contains only six conserved Cys residues that may form three pairs of disulfide bonds. The domain may have a potential function in lipid transfer or protection during plant embryo sac development and reproduction. Pssm-ID: 461693 Cd Length: 70 Bit Score: 34.73 E-value: 1.66e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Prolamin_like | pfam05617 | Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be ... |
46-113 | 1.66e-03 | ||
Prolamin-like; Prolamin_like (in which DUF784 and DUF1278 have been merged) is found to be expressed in the plant embryo sac and to be regulated by the Myb98 transcription factor. Computational analysis has revealed that members are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, this domain contains only six conserved Cys residues that may form three pairs of disulfide bonds. The domain may have a potential function in lipid transfer or protection during plant embryo sac development and reproduction. Pssm-ID: 461693 Cd Length: 70 Bit Score: 34.73 E-value: 1.66e-03
|
||||||
| Blast search parameters | ||||
|
