|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
1084-1219 |
4.18e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.86 E-value: 4.18e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 1084 FDAFISYSSKDeaFVAEELAPMLENEDPSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSA 1163
Cdd:smart00255 2 YDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 1164 HHQVLRDRRRRLIVILLGEVPQ--KDLDPDIRLYLKTNtYLQWGDKL---FWEKLRFALPD 1219
Cdd:smart00255 80 LENALEEGGLRVIPIFYEVIPSdvRKQPGKFRKVFKKN-YLKWPEDEkeqFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
139-570 |
4.04e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 115.80 E-value: 4.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 139 SLDIAPQVFTSELSKLQRLDLSQNNMWSVPDGFICPLARLSYLNLTQNRLRDLSVFHFSASLSTRLSKKCgssIVTLDLS 218
Cdd:COG4886 4 LLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLL---LLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 219 HNTIDNLPPAIFSGLGKLTDLRLQSNglnyiadRAFEGLVSLSRLELSLNRLTNLPPELfSEAKHIKEIYLQNNSLNVLA 298
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEEL-ANLTNLKELDLSNNQLTDLP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 299 PGIfSDLKQLLVLDLSNNELTSEwinPATFRGLSKLILLDLSNNKITKLePTIFRDLTSVQVLRLQENFIESIGENtFLG 378
Cdd:COG4886 153 EPL-GNLTNLKSLDLSNNQLTDL---PEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEP-LAN 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 379 LGALHTVILSNNRLSTVDhfTFSGLNSLALLSLDYNRISRIDrqALRNHSALQELHLNGNKLLQVpdalydvpLLRTLDL 458
Cdd:COG4886 227 LTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDL--------KLKELEL 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 459 GENHISNIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQASFDNNTKLQAIRLDGNYLTDI 538
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
410 420 430
....*....|....*....|....*....|..
gi 2047518235 539 AGLFTKLPNLLWLNISDNHLEVFDYALIPTGL 570
Cdd:COG4886 375 LEATLLTLALLLLTLLLLLLTTTAGVLLLTLA 406
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
1087-1193 |
2.47e-20 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 87.76 E-value: 2.47e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 1087 FISYSSKDEAFVaEELAPMLENEDpsYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHq 1166
Cdd:pfam13676 2 FISYAGEDRAWA-EWLADALEAAG--YRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALA- 77
|
90 100
....*....|....*....|....*..
gi 2047518235 1167 vLRDRRRRLIVILLGEvpqKDLDPDIR 1193
Cdd:pfam13676 78 -DPEGRKRLIPVRLEC---DLELPGLA 100
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
62-659 |
4.51e-18 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 90.68 E-value: 4.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 62 NFSVLHPENTVRLrlqcndgLFFQSSLSpGSFKQLTKLHAlSIEYCKianlsegsFQGLkqLVNLTLRTHNTDWS--SIS 139
Cdd:PLN00113 22 NFSMLHAEELELL-------LSFKSSIN-DPLKYLSNWNS-SADVCL--------WQGI--TCNNSSRVVSIDLSgkNIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 140 LDIAPQVFtsELSKLQRLDLSQNNM-WSVPDGFICPLARLSYLNLTQNrlrdlsvfHFSASLStrlsKKCGSSIVTLDLS 218
Cdd:PLN00113 83 GKISSAIF--RLPYIQTINLSNNQLsGPIPDDIFTTSSSLRYLNLSNN--------NFTGSIP----RGSIPNLETLDLS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 219 HNTIDNlppAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLE---LSLNRLTNLPPELFSEAKHIKEIYLQNNSLN 295
Cdd:PLN00113 149 NNMLSG---EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEfltLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 296 VLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLSKLILLDLSNNKIT-KLEPTIFrDLTSVQVLRLQENFIESIGEN 374
Cdd:PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPI--PSSLGNLKNLQYLFLYQNKLSgPIPPSIF-SLQKLISLDLSDNSLSGEIPE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 375 TFLGLGALHTVILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNKLL-QVPDALYDvpll 453
Cdd:PLN00113 303 LVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCS---- 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 454 rtldlgenhisnidnasfrhMAHLYGLRLTENNIEiirrgtFEAMKSLHILNlsqnrlktveqasfdnntKLQAIRLDGN 533
Cdd:PLN00113 379 --------------------SGNLFKLILFSNSLE------GEIPKSLGACR------------------SLRRVRLQDN 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 534 YLT-DIAGLFTKLPNLLWLNISDNHLE--VFDYALIPTGLQWLDIHANKItelgnyfeiesqlalstidasSNQLTEITG 610
Cdd:PLN00113 415 SFSgELPSEFTKLPLVYFLDISNNNLQgrINSRKWDMPSLQMLSLARNKF---------------------FGGLPDSFG 473
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2047518235 611 SaipNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNAL 659
Cdd:PLN00113 474 S---KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDEL 519
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
283-344 |
3.22e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 3.22e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2047518235 283 HIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSewINPATFRGLSKLILLDLSNNKI 344
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
331-558 |
4.29e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 64.04 E-value: 4.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 331 LSKLILLDLSNNKITKLEptIFRDLTSVQVLRLQENFIESI-GENTFLGLGALHtviLSNNRLSTVDHFtfSGLNSLALL 409
Cdd:cd21340 1 LKRITHLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKIeNLEFLTNLTHLY---LQNNQIEKIENL--ENLVNLKKL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 410 SLDYNRISRIDrqALRNHSALQELHLNGNKLLQvpdalyDVPLLrtldlgenhisnIDNASFRHMAhlyglrltenniei 489
Cdd:cd21340 74 YLGGNRISVVE--GLENLTNLEELHIENQRLPP------GEKLT------------FDPRSLAALS-------------- 119
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2047518235 490 irrgtfeamKSLHILNLSQNRLKTVEQ-ASFDNntkLQAIRLDGNYLTD---IAGLFTKLPNLLWLNISDNHL 558
Cdd:cd21340 120 ---------NSLRVLNISGNNIDSLEPlAPLRN---LEQLDASNNQISDleeLLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
840-899 |
1.10e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 58.30 E-value: 1.10e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 840 ELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLKILRLDHNRL 899
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-919 |
7.92e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 7.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGShAFLGRKRLKILFLNGSNVETVSNrTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYN 873
Cdd:COG4886 139 KELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2047518235 874 RIASIANhTFDHLHGLKILRLDHNRLVEFNVWLLPKQLNDIRLAFN 919
Cdd:COG4886 216 QLTDLPE-PLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNN 260
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
796-851 |
1.90e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.14 E-value: 1.90e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 796 IYLDGNNFRSLGSHAFLGRKRLKILFLNGSNVETVSNRTFYGLKELEILQLDHNLL 851
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-899 |
5.91e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 51.71 E-value: 5.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGSHAFLgrKRLKILFLNGSNVETVSNrtFYGLKELEILQLDHNLLTALNGFEfeGLDSLKELFLQYN 873
Cdd:cd21340 5 THLYLNDKNITKIDNLSLC--KNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIENLE--NLVNLKKLYLGGN 78
|
90 100
....*....|....*....|....*.
gi 2047518235 874 RIASIANhtFDHLHGLKILRLDHNRL 899
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIENQRL 102
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-919 |
9.30e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 9.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGShaFLGRKRLKILFLNGSNVETVSNrtFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKE 867
Cdd:cd21340 49 THLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPGEKLTFDPrslaalSNSLRV 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 868 LFLQYNRIASIANhtFDHLHGLKILRLDHNRLVEFN--VWLLPK--QLNDIRLAFN 919
Cdd:cd21340 125 LNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSwpSLRELDLTGN 178
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
831-922 |
9.49e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 46.47 E-value: 9.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 831 SNRTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYNRIASIANhTFDHLHGLKILRLDHNRLVEFNVWLLP-K 909
Cdd:COG4886 105 GNEELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPEELGNlT 182
|
90
....*....|...
gi 2047518235 910 QLNDIRLAFNAWS 922
Cdd:COG4886 183 NLKELDLSNNQIT 195
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
616-660 |
8.40e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 8.40e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2047518235 616 SVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNALR 660
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS 46
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
1084-1219 |
4.18e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.86 E-value: 4.18e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 1084 FDAFISYSSKDeaFVAEELAPMLENEDPSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSA 1163
Cdd:smart00255 2 YDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 1164 HHQVLRDRRRRLIVILLGEVPQ--KDLDPDIRLYLKTNtYLQWGDKL---FWEKLRFALPD 1219
Cdd:smart00255 80 LENALEEGGLRVIPIFYEVIPSdvRKQPGKFRKVFKKN-YLKWPEDEkeqFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
139-570 |
4.04e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 115.80 E-value: 4.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 139 SLDIAPQVFTSELSKLQRLDLSQNNMWSVPDGFICPLARLSYLNLTQNRLRDLSVFHFSASLSTRLSKKCgssIVTLDLS 218
Cdd:COG4886 4 LLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLL---LLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 219 HNTIDNLPPAIFSGLGKLTDLRLQSNglnyiadRAFEGLVSLSRLELSLNRLTNLPPELfSEAKHIKEIYLQNNSLNVLA 298
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEEL-ANLTNLKELDLSNNQLTDLP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 299 PGIfSDLKQLLVLDLSNNELTSEwinPATFRGLSKLILLDLSNNKITKLePTIFRDLTSVQVLRLQENFIESIGENtFLG 378
Cdd:COG4886 153 EPL-GNLTNLKSLDLSNNQLTDL---PEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEP-LAN 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 379 LGALHTVILSNNRLSTVDhfTFSGLNSLALLSLDYNRISRIDrqALRNHSALQELHLNGNKLLQVpdalydvpLLRTLDL 458
Cdd:COG4886 227 LTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDL--------KLKELEL 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 459 GENHISNIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQASFDNNTKLQAIRLDGNYLTDI 538
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
410 420 430
....*....|....*....|....*....|..
gi 2047518235 539 AGLFTKLPNLLWLNISDNHLEVFDYALIPTGL 570
Cdd:COG4886 375 LEATLLTLALLLLTLLLLLLTTTAGVLLLTLA 406
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
126-539 |
1.15e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 111.56 E-value: 1.15e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 126 LTLRTHNTDWSSISLDIAPQVFTSELSKLQRLDLSQNNMWSVPDGFICPLARLSYLNLTQNRLRDLSVFHFSASLSTRLS 205
Cdd:COG4886 12 LLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 206 KKCGSSIVTLDLSHNTidnlppaIFSGLGKLTDLRLQSNGLNYIADrAFEGLVSLSRLELSLNRLTNLPPELfSEAKHIK 285
Cdd:COG4886 92 LGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTDLPEPL-GNLTNLK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 286 EIYLQNNSLNVLaPGIFSDLKQLLVLDLSNNELTSEwinPATFRGLSKLILLDLSNNKITKLePTIFRDLTSVQVLRLQE 365
Cdd:COG4886 163 SLDLSNNQLTDL-PEELGNLTNLKELDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSN 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 366 NFIESIGEntFLGLGALHTVILSNNRLSTVDHftFSGLNSLALLSLDYNRISRIDRQAL---RNHSALQELHLNGNKLLQ 442
Cdd:COG4886 238 NQLTDLPE--LGNLTNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELellLGLNSLLLLLLLLNLLEL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 443 VPDALYDVPLLRTLDLGENHISNIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQASFDNN 522
Cdd:COG4886 314 LILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLL 393
|
410
....*....|....*..
gi 2047518235 523 TKLQAIRLDGNYLTDIA 539
Cdd:COG4886 394 LTTTAGVLLLTLALLDA 410
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
243-627 |
1.95e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 110.79 E-value: 1.95e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 243 SNGLNYIADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEW 322
Cdd:COG4886 7 SLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 323 INPATFRGLSKLILLDLSNNKItkleptiFRDLTSVQVLRLQENFIESIGENtFLGLGALHTVILSNNRLSTVDhFTFSG 402
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLP-EPLGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 403 LNSLALLSLDYNRISRIDRqALRNHSALQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISNIDnASFRHMAHLYGLRL 482
Cdd:COG4886 158 LTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLP-EPLANLTNLETLDL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 483 TENNIEIIRrgTFEAMKSLHILNLSQNRLKTVEQASfdNNTKLQAIRLDGNYLTDIAglFTKLPNLLWLNISDNHLEVFD 562
Cdd:COG4886 236 SNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLSNNQLTDLK--LKELELLLGLNSLLLLLLLLN 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2047518235 563 YALIPTGLQWLDIHANKITELGNYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLI 627
Cdd:COG4886 310 LLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
265-649 |
3.14e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 110.02 E-value: 3.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 265 LSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFRGLSKLILLDLSNNKI 344
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 345 TKLEPTIFRDLTSVQVLRLQENfiesigeNTFLGLGALHTVILSNNRLSTVDHFtFSGLNSLALLSLDYNRISRIDRqAL 424
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLPE-PL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 425 RNHSALQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISNIDNAsfrhmahlyglrltennieiirrgtFEAMKSLHIL 504
Cdd:COG4886 156 GNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEP-------------------------LGNLTNLEEL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 505 NLSQNRLKTVEqASFDNNTKLQAIRLDGNYLTDIAGLfTKLPNLLWLNISDNHLEVFDYALIPTGLQWLDIHANKITELG 584
Cdd:COG4886 211 DLSGNQLTDLP-EPLANLTNLETLDLSNNQLTDLPEL-GNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLK 288
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 585 -NYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGN 649
Cdd:COG4886 289 lKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLL 354
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
331-693 |
1.84e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 95.77 E-value: 1.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 331 LSKLILLDLSNNKITKLEPTIFRDLTSVQVLRLQENFIESIGENTFLGLGALHTVILSNNRLSTVDHFTFSGLNSLALLS 410
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 411 LDYNRISRIDRQALRNhsaLQELHLNGNkllqvpDALYDVPLLRTLDLGENHISNIDnASFRHMAHLYGLRLTENNIEII 490
Cdd:COG4886 82 LSLLLLGLTDLGDLTN---LTELDLSGN------EELSNLTNLESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 491 RRgTFEAMKSLHILNLSQNRLKTVEqASFDNNTKLQAIRLDGNYLTDIAGLFTKLPNLLWLNISDNHLEVFDYALIP-TG 569
Cdd:COG4886 152 PE-PLGNLTNLKSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANlTN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 570 LQWLDIHANKITELGnyfEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGN 649
Cdd:COG4886 230 LETLDLSNNQLTDLP---ELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL 306
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2047518235 650 KITTLDPNALRISAVPDDRPLPEFYIGGNPYQCDCNLNWLQKSN 693
Cdd:COG4886 307 LLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALL 350
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
1087-1193 |
2.47e-20 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 87.76 E-value: 2.47e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 1087 FISYSSKDEAFVaEELAPMLENEDpsYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHq 1166
Cdd:pfam13676 2 FISYAGEDRAWA-EWLADALEAAG--YRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALA- 77
|
90 100
....*....|....*....|....*..
gi 2047518235 1167 vLRDRRRRLIVILLGEvpqKDLDPDIR 1193
Cdd:pfam13676 78 -DPEGRKRLIPVRLEC---DLELPGLA 100
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
62-659 |
4.51e-18 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 90.68 E-value: 4.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 62 NFSVLHPENTVRLrlqcndgLFFQSSLSpGSFKQLTKLHAlSIEYCKianlsegsFQGLkqLVNLTLRTHNTDWS--SIS 139
Cdd:PLN00113 22 NFSMLHAEELELL-------LSFKSSIN-DPLKYLSNWNS-SADVCL--------WQGI--TCNNSSRVVSIDLSgkNIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 140 LDIAPQVFtsELSKLQRLDLSQNNM-WSVPDGFICPLARLSYLNLTQNrlrdlsvfHFSASLStrlsKKCGSSIVTLDLS 218
Cdd:PLN00113 83 GKISSAIF--RLPYIQTINLSNNQLsGPIPDDIFTTSSSLRYLNLSNN--------NFTGSIP----RGSIPNLETLDLS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 219 HNTIDNlppAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLE---LSLNRLTNLPPELFSEAKHIKEIYLQNNSLN 295
Cdd:PLN00113 149 NNMLSG---EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEfltLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 296 VLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLSKLILLDLSNNKIT-KLEPTIFrDLTSVQVLRLQENFIESIGEN 374
Cdd:PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPI--PSSLGNLKNLQYLFLYQNKLSgPIPPSIF-SLQKLISLDLSDNSLSGEIPE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 375 TFLGLGALHTVILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNKLL-QVPDALYDvpll 453
Cdd:PLN00113 303 LVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCS---- 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 454 rtldlgenhisnidnasfrhMAHLYGLRLTENNIEiirrgtFEAMKSLHILNlsqnrlktveqasfdnntKLQAIRLDGN 533
Cdd:PLN00113 379 --------------------SGNLFKLILFSNSLE------GEIPKSLGACR------------------SLRRVRLQDN 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 534 YLT-DIAGLFTKLPNLLWLNISDNHLE--VFDYALIPTGLQWLDIHANKItelgnyfeiesqlalstidasSNQLTEITG 610
Cdd:PLN00113 415 SFSgELPSEFTKLPLVYFLDISNNNLQgrINSRKWDMPSLQMLSLARNKF---------------------FGGLPDSFG 473
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2047518235 611 SaipNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNAL 659
Cdd:PLN00113 474 S---KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDEL 519
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
37-389 |
2.21e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.14 E-value: 2.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 37 WDGYTEDDLTLLCRLRTINSELENTNFSVLHPENTVRLRLQCNDGLFFQSSLS------------PGSFKQLTKLHALSI 104
Cdd:COG4886 64 SLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLEsldlsgnqltdlPEELANLTNLKELDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 105 EYCKIANLSEgsfqglkqlvnltlrthntdwssiSLdiapqvftSELSKLQRLDLSQNNMWSVPDgFICPLARLSYLNLT 184
Cdd:COG4886 144 SNNQLTDLPE------------------------PL--------GNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 185 QNRLRDLsvfhfSASLSTRlskkcgSSIVTLDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADraFEGLVSLSRLE 264
Cdd:COG4886 191 NNQITDL-----PEPLGNL------TNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQLTDLPE--LGNLTNLEELD 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 265 LSLNRLTNLPPElfSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFRGLSKLILLDLSNNKI 344
Cdd:COG4886 257 LSNNQLTDLPPL--ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2047518235 345 TKLEPTIFRDLTSVQVLRLQENFIESIGENTFLGLGALHTVILSN 389
Cdd:COG4886 335 VTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATL 379
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
1084-1179 |
2.80e-14 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 72.01 E-value: 2.80e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 1084 FDAFISYSSKD--EAFVAEELAPMLENedpSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFK 1161
Cdd:pfam01582 1 YDVFLSFRGSDtrEWFVSHLLKELKQK---GIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90
....*....|....*...
gi 2047518235 1162 SAHHQVLRDrrrRLIVIL 1179
Cdd:pfam01582 78 KILECALDL---GQKVIP 92
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
90-375 |
1.93e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.20 E-value: 1.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 90 PGSFKQLTKLHALSIEYCKIANLSEgSFQGLKQLVNLTLrtHNTDWSSISLDIapqvftSELSKLQRLDLSQNNMWSVPD 169
Cdd:COG4886 152 PEPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDL--SNNQITDLPEPL------GNLTNLEELDLSGNQLTDLPE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 170 GfICPLARLSYLNLTQNRLRDLSVFhfsaslsTRLSKkcgssIVTLDLSHNTIDNLPPAifSGLGKLTDLRLQSNGLNYI 249
Cdd:COG4886 223 P-LANLTNLETLDLSNNQLTDLPEL-------GNLTN-----LEELDLSNNQLTDLPPL--ANLTNLKTLDLSNNQLTDL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 250 ADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFR 329
Cdd:COG4886 288 KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2047518235 330 GLSKLILLDLSNNKITKLEPTIFRDLTSVQVLRLQENFIESIGENT 375
Cdd:COG4886 368 TLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNT 413
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
283-344 |
3.22e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 3.22e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2047518235 283 HIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSewINPATFRGLSKLILLDLSNNKI 344
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
331-558 |
4.29e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 64.04 E-value: 4.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 331 LSKLILLDLSNNKITKLEptIFRDLTSVQVLRLQENFIESI-GENTFLGLGALHtviLSNNRLSTVDHFtfSGLNSLALL 409
Cdd:cd21340 1 LKRITHLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKIeNLEFLTNLTHLY---LQNNQIEKIENL--ENLVNLKKL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 410 SLDYNRISRIDrqALRNHSALQELHLNGNKLLQvpdalyDVPLLrtldlgenhisnIDNASFRHMAhlyglrltenniei 489
Cdd:cd21340 74 YLGGNRISVVE--GLENLTNLEELHIENQRLPP------GEKLT------------FDPRSLAALS-------------- 119
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2047518235 490 irrgtfeamKSLHILNLSQNRLKTVEQ-ASFDNntkLQAIRLDGNYLTD---IAGLFTKLPNLLWLNISDNHL 558
Cdd:cd21340 120 ---------NSLRVLNISGNNIDSLEPlAPLRN---LEQLDASNNQISDleeLLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
840-899 |
1.10e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 58.30 E-value: 1.10e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 840 ELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLKILRLDHNRL 899
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
175-429 |
1.47e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.50 E-value: 1.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 175 LARLSYLNLTQNRLRDLSVFHFSASLSTrlskkcgssivtLDLSHNTIDNLPPaiFSGLGKLTDLRLQSNglnyiadraf 254
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLSLCKNLKV------------LYLYDNKITKIEN--LEFLTNLTHLYLQNN---------- 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 255 eglvSLSRLElSLNRLTNLppelfseakhiKEIYLQNNSLNVLApGiFSDLKQLLVLDLSNNELTSE---WINPATFRGL 331
Cdd:cd21340 57 ----QIEKIE-NLENLVNL-----------KKLYLGGNRISVVE-G-LENLTNLEELHIENQRLPPGeklTFDPRSLAAL 118
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 332 SK-LILLDLSNNKITKLEPtiFRDLTSVQVLRLQENFIESIGE--NTFLGLGALHTVILSNNRLSTV----DHFTfsgLN 404
Cdd:cd21340 119 SNsLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVCKKpkyrDKII---LA 193
|
250 260
....*....|....*....|....*
gi 2047518235 405 SLALLSLDYNRISRIDRQALRNHSA 429
Cdd:cd21340 194 SKSLEVLDGKEITDTERQFLKRLKA 218
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
382-440 |
4.61e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.38 E-value: 4.61e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2047518235 382 LHTVILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNKL 440
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
816-875 |
1.06e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.61 E-value: 1.06e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 816 RLKILFLNGSNVETVSNRTFYGLKELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRI 875
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
259-318 |
2.90e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.45 E-value: 2.90e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 259 SLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNEL 318
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
233-438 |
5.59e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.87 E-value: 5.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 233 LGKLTDLRLQSNGLNYIadrafeglvslsrlelslnrltnlppELFSEAKHIKEIYLQNNSLNVLAPgiFSDLKQLLVLD 312
Cdd:cd21340 1 LKRITHLYLNDKNITKI--------------------------DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLY 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 313 LSNNELTSewINPatFRGLSKLILLDLSNNKITKLEPtiFRDLTSVQVL-----RLQENFIESIGENTFLGLGA-LHTVI 386
Cdd:cd21340 53 LQNNQIEK--IEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELhienqRLPPGEKLTFDPRSLAALSNsLRVLN 126
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2047518235 387 LSNNRLSTVDhfTFSGLNSLALLSLDYNRISRIDR--QALRNHSALQELHLNGN 438
Cdd:cd21340 127 ISGNNIDSLE--PLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
307-366 |
5.64e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 53.30 E-value: 5.64e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 307 QLLVLDLSNNELTSewINPATFRGLSKLILLDLSNNKITKLEPTIFRDLTSVQVLRLQEN 366
Cdd:pfam13855 2 NLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
451-511 |
7.28e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 53.30 E-value: 7.28e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 451 PLLRTLDLGENHISNIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRL 511
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
118-321 |
7.46e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 58.91 E-value: 7.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 118 QGLKQLVNLTLRTHNTdwSSISLDiAPQVFTSELSK--LQRLDLSQNNMWSVPDGFIC-----PLARLSYLNLTQNRLRD 190
Cdd:cd00116 75 QGLTKGCGLQELDLSD--NALGPD-GCGVLESLLRSssLQELKLNNNGLGDRGLRLLAkglkdLPPALEKLVLGRNRLEG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 191 LSvfhfSASLSTRLSKKCgsSIVTLDLSHNTI-DNLPPAIFSGL---GKLTDLRLQSNGLNYIADRAFEGLV----SLSR 262
Cdd:cd00116 152 AS----CEALAKALRANR--DLKELNLANNGIgDAGIRALAEGLkanCNLEVLDLNNNGLTDEGASALAETLaslkSLEV 225
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2047518235 263 LELSLNRLTN-----LPPELFSEAKHIKEIYLQNNSLNVLAPGIFS----DLKQLLVLDLSNNELTSE 321
Cdd:cd00116 226 LNLGDNNLTDagaaaLASALLSPNISLLTLSLSCNDITDDGAKDLAevlaEKESLLELDLRGNKFGEE 293
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-919 |
7.92e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 7.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGShAFLGRKRLKILFLNGSNVETVSNrTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYN 873
Cdd:COG4886 139 KELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2047518235 874 RIASIANhTFDHLHGLKILRLDHNRLVEFNVWLLPKQLNDIRLAFN 919
Cdd:COG4886 216 QLTDLPE-PLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNN 260
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
476-535 |
1.53e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.14 E-value: 1.53e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 476 HLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQASFDNNTKLQAIRLDGNYL 535
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
93-366 |
1.63e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 57.75 E-value: 1.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 93 FKQLTKLHALSIEYCkiaNLSEGSFQGL-------KQLVNLTLRTHNTDWSSISLDIAPQVFTSeLSKLQRLDLSQNNMW 165
Cdd:cd00116 19 LPKLLCLQVLRLEGN---TLGEEAAKALasalrpqPSLKELCLSLNETGRIPRGLQSLLQGLTK-GCGLQELDLSDNALG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 166 SVPDGFICPLAR---LSYLNLTQNRLRDLSVFHFSASLstrlsKKCGSSIVTLDLSHNTIDNLPPA----IFSGLGKLTD 238
Cdd:cd00116 95 PDGCGVLESLLRsssLQELKLNNNGLGDRGLRLLAKGL-----KDLPPALEKLVLGRNRLEGASCEalakALRANRDLKE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 239 LRLQSNGLNyiaDRAFEGLVslsrlelslnrltnlppELFSEAKHIKEIYLQNNSLN----VLAPGIFSDLKQLLVLDLS 314
Cdd:cd00116 170 LNLANNGIG---DAGIRALA-----------------EGLKANCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLG 229
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2047518235 315 NNELTSEWI---NPATFRGLSKLILLDLSNNKIT----KLEPTIFRDLTSVQVLRLQEN 366
Cdd:cd00116 230 DNNLTDAGAaalASALLSPNISLLTLSLSCNDITddgaKDLAEVLAEKESLLELDLRGN 288
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
796-851 |
1.90e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.14 E-value: 1.90e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 796 IYLDGNNFRSLGSHAFLGRKRLKILFLNGSNVETVSNRTFYGLKELEILQLDHNLL 851
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
433-653 |
1.90e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 56.33 E-value: 1.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 433 LHLNGNKLLQVPDaLYDVPLLRTLDLGENHISNIDN-ASFRHMAHLYglrLTENNIEIIRRgtFEAMKSLHILNLSQNRL 511
Cdd:cd21340 7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKIENlEFLTNLTHLY---LQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 512 KTVEqasfdnntklqairldgnyltdiaGLfTKLPNLLWLNISDNHLevfdyaliPTGLQWLdihankitelgnyFEIES 591
Cdd:cd21340 81 SVVE------------------------GL-ENLTNLEELHIENQRL--------PPGEKLT-------------FDPRS 114
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2047518235 592 QLALS----TIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQ--SYTFFKKPNLTRVDLFGNKITT 653
Cdd:cd21340 115 LAALSnslrVLNISGNNIDSLEPLAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCK 182
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
149-342 |
2.05e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 59.09 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 149 SELSKLQRLDLSQNNM-WSVPDGFIcPLARLSYLNLTQNRLrdlsvfhfSASLSTRlsKKCGSSIVTLDLSHNTI-DNLP 226
Cdd:PLN00113 401 GACRSLRRVRLQDNSFsGELPSEFT-KLPLVYFLDISNNNL--------QGRINSR--KWDMPSLQMLSLARNKFfGGLP 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 227 PaiFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLK 306
Cdd:PLN00113 470 D--SFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMP 547
|
170 180 190
....*....|....*....|....*....|....*.
gi 2047518235 307 QLLVLDLSNNELTSEWinPATFRGLSKLILLDLSNN 342
Cdd:PLN00113 548 VLSQLDLSQNQLSGEI--PKNLGNVESLVQVNISHN 581
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
136-417 |
2.84e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 58.55 E-value: 2.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 136 SSISLDIAPQVFTselsklqrLDLSQNNMWSVPDGFicpLARLSYLNLTQNRLRDL--------SVFHFSASLSTRLSKK 207
Cdd:PRK15370 191 TTIPACIPEQITT--------LILDNNELKSLPENL---QGNIKTLYANSNQLTSIpatlpdtiQEMELSINRITELPER 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 208 CGSSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRlqsnglnyiadrafeglvslsrlelslNRLTNLPPELFSEakhIKEI 287
Cdd:PRK15370 260 LPSALQSLDLFHNKISCLPENLPEELRYLSVYD---------------------------NSIRTLPAHLPSG---ITHL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 288 YLQNNSLNVLAPGIFSDLKqllVLDLSNNELTS--EWINPAtfrglskLILLDLSNNKITKLEPTIfrdLTSVQVLRLQE 365
Cdd:PRK15370 310 NVQSNSLTALPETLPPGLK---TLEAGENALTSlpASLPPE-------LQVLDVSKNQITVLPETL---PPTITTLDVSR 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 366 NFIESIGENTflgLGALHTVILSNNRLS----TVDHFTFSGLNSLALLsLDYNRIS 417
Cdd:PRK15370 377 NALTNLPENL---PAALQIMQASRNNLVrlpeSLPHFRGEGPQPTRII-VEYNPFS 428
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
337-392 |
4.08e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.99 E-value: 4.08e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 337 LDLSNNKITKLEPTIFRDLTSVQVLRLQENFIESIGENTFLGLGALHTVILSNNRL 392
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
210-270 |
5.74e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 5.74e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 210 SSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLELSLNRL 270
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
328-596 |
9.22e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 55.44 E-value: 9.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 328 FRGLSKLILLDLSNNKITKLE----PTIFRDLTSVQVLRLQENFIESIGENTFLGLGALhtviLSNNRLSTVDHFT--FS 401
Cdd:cd00116 19 LPKLLCLQVLRLEGNTLGEEAakalASALRPQPSLKELCLSLNETGRIPRGLQSLLQGL----TKGCGLQELDLSDnaLG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 402 GLNSLALlsldynrisridrQALRNHSALQELHLNGNKLLQ-----VPDALYDVPL-LRTLDLGENHISNIDNAS----F 471
Cdd:cd00116 95 PDGCGVL-------------ESLLRSSSLQELKLNNNGLGDrglrlLAKGLKDLPPaLEKLVLGRNRLEGASCEAlakaL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 472 RHMAHLYGLRLTENNI--EIIRRgTFEAMKS---LHILNLSQNRLkTVEQAS-----FDNNTKLQAIRLDGNYLTD--IA 539
Cdd:cd00116 162 RANRDLKELNLANNGIgdAGIRA-LAEGLKAncnLEVLDLNNNGL-TDEGASalaetLASLKSLEVLNLGDNNLTDagAA 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 540 ----GLFTKLPNLLWLNISDNHLE----------VFDYALiptgLQWLDIHANKITELGNYFEIESQLALS 596
Cdd:cd00116 240 alasALLSPNISLLTLSLSCNDITddgakdlaevLAEKES----LLELDLRGNKFGEEGAQLLAESLLEPG 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
356-416 |
9.56e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.83 E-value: 9.56e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 356 TSVQVLRLQENFIESIGENTFLGLGALHTVILSNNRLSTVDHFTFSGLNSLALLSLDYNRI 416
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
500-558 |
1.99e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.06 E-value: 1.99e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 500 SLHILNLSQNRLKTVEQASFDNNTKLQAIRLDGNYLTDI-AGLFTKLPNLLWLNISDNHL 558
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-899 |
5.91e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 51.71 E-value: 5.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGSHAFLgrKRLKILFLNGSNVETVSNrtFYGLKELEILQLDHNLLTALNGFEfeGLDSLKELFLQYN 873
Cdd:cd21340 5 THLYLNDKNITKIDNLSLC--KNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIENLE--NLVNLKKLYLGGN 78
|
90 100
....*....|....*....|....*.
gi 2047518235 874 RIASIANhtFDHLHGLKILRLDHNRL 899
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIENQRL 102
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
235-294 |
1.21e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 46.75 E-value: 1.21e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 235 KLTDLRLQSNGLNYIADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSL 294
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
423-653 |
1.86e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.59 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 423 ALRNHSALQELHLNGNKLLQVPDALYDVP-------LLRTLDLGenhisniDNASFRHMAHLYglrltenniEIIRRGTf 495
Cdd:cd00116 46 ALRPQPSLKELCLSLNETGRIPRGLQSLLqgltkgcGLQELDLS-------DNALGPDGCGVL---------ESLLRSS- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 496 eamkSLHILNLSQNRL-----KTVEQASFDNNTKLQAIRLDGNYLT-----DIAGLFTKLPNLLWLNISDNHLEVFDYAL 565
Cdd:cd00116 109 ----SLQELKLNNNGLgdrglRLLAKGLKDLPPALEKLVLGRNRLEgasceALAKALRANRDLKELNLANNGIGDAGIRA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 566 I------PTGLQWLDIHANKITELGNYF---EIESQLALSTIDASSNQLTEITGSAIPN-------SVELLYLNDNLISK 629
Cdd:cd00116 185 LaeglkaNCNLEVLDLNNNGLTDEGASAlaeTLASLKSLEVLNLGDNNLTDAGAAALASallspniSLLTLSLSCNDITD 264
|
250 260
....*....|....*....|....*...
gi 2047518235 630 VQSYTF----FKKPNLTRVDLFGNKITT 653
Cdd:cd00116 265 DGAKDLaevlAEKESLLELDLRGNKFGE 292
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
405-463 |
3.39e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.59 E-value: 3.39e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 405 SLALLSLDYNRISRIDRQALRNHSALQELHLNGNKLLQV-PDALYDVPLLRTLDLGENHI 463
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
430-487 |
8.87e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 8.87e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2047518235 430 LQELHLNGNKLLQV-PDALYDVPLLRTLDLGENHISNIDNASFRHMAHLYGLRLTENNI 487
Cdd:pfam13855 3 LRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
90-318 |
1.33e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 49.16 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 90 PGSFKQLTKLHALSIEYCKIANLSEgSFQGLKQLVNLTLRtHN--TDWSSISldiapqvftsELSKLQRLDLSQNNMWSV 167
Cdd:COG4886 198 PEPLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLS-NNqlTDLPELG----------NLTNLEELDLSNNQLTDL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 168 PDgfICPLARLSYLNLTQNRLRDLSVFHFSASLSTRLSKKCGSSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRLQSNGLN 247
Cdd:COG4886 266 PP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALS 343
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 248 YIADRAFEGLVSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNEL 318
Cdd:COG4886 344 LSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
209-465 |
2.52e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 48.25 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 209 GSSIVTLDLSHNTIDNL-PPAIFSGLGKLTDLRLQSNGLNYIADRAFEGLV-------SLSRLELSLNRLTNLPPELFSE 280
Cdd:COG5238 207 NTTVTTLWLKRNPIGDEgAEILAEALKGNKSLTTLDLSNNQIGDEGVIALAealknntTVETLYLSGNQIGAEGAIALAK 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 281 AkhikeiyLQNNslnvlapgifsdlKQLLVLDLSNNELTSE-WINPA-TFRGLSKLILLDLSNNKITKLEptifrdltsv 358
Cdd:COG5238 287 A-------LQGN-------------TTLTSLDLSVNRIGDEgAIALAeGLQGNKTLHTLNLAYNGIGAQG---------- 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 359 qvlrlQENFIESIGENTflglgALHTVILSNNRLStvDHftfsGLNSLAllsldynrisridrQALRNHSALQELHLNGN 438
Cdd:COG5238 337 -----AIALAKALQENT-----TLHSLDLSDNQIG--DE----GAIALA--------------KYLEGNTTLRELNLGKN 386
|
250 260 270
....*....|....*....|....*....|..
gi 2047518235 439 KL-----LQVPDALyDVPLLRTLDLGENHISN 465
Cdd:COG5238 387 NIgkqgaEALIDAL-QTNRLHTLILDGNLIGA 417
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-919 |
9.30e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 9.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLGShaFLGRKRLKILFLNGSNVETVSNrtFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKE 867
Cdd:cd21340 49 THLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPGEKLTFDPrslaalSNSLRV 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2047518235 868 LFLQYNRIASIANhtFDHLHGLKILRLDHNRLVEFN--VWLLPK--QLNDIRLAFN 919
Cdd:cd21340 125 LNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSwpSLRELDLTGN 178
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
831-922 |
9.49e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 46.47 E-value: 9.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 831 SNRTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYNRIASIANhTFDHLHGLKILRLDHNRLVEFNVWLLP-K 909
Cdd:COG4886 105 GNEELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPEELGNlT 182
|
90
....*....|...
gi 2047518235 910 QLNDIRLAFNAWS 922
Cdd:COG4886 183 NLKELDLSNNQIT 195
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
523-580 |
1.61e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 1.61e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2047518235 523 TKLQAIRLDGNYLTDI-AGLFTKLPNLLWLNISDNHLEVFDYALI--PTGLQWLDIHANKI 580
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFsgLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
289-368 |
3.95e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.81 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 289 LQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLSKLILLDLSNNKITKLEPTIFRDLTSVQVLRLQENFI 368
Cdd:PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNI--PPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-922 |
5.52e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 44.15 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 794 TQIYLDGNNFRSLgSHAFLGRKRLKILFLNGSNVETVSNrtFYGLKELEILQLDHNLLTALNgfEFEGLDSLKELFLQYN 873
Cdd:COG4886 208 EELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNN 282
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2047518235 874 RIASIANHTFDHLHGLKILRLDHNRLVEFNVWLLPKQLNDIRLAFNAWS 922
Cdd:COG4886 283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLK 331
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
408-659 |
9.27e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 43.24 E-value: 9.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 408 LLSLDYNRISR----IDRQALRNHSaLQELHLNGNKLLQ-----VPDALYDVPLLRTLDLGENHISniDNASFRHMAHLY 478
Cdd:COG5238 157 HLLGLAARLGLlaaiSMAKALQNNS-VETVYLGCNQIGDegieeLAEALTQNTTVTTLWLKRNPIG--DEGAEILAEALK 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 479 GLrltennieiirrgtfeamKSLHILNLSQNRLKTVEQASF----DNNTKLQAIRLDGNYLTD-----IAGLFTKLPNLL 549
Cdd:COG5238 234 GN------------------KSLTTLDLSNNQIGDEGVIALaealKNNTTVETLYLSGNQIGAegaiaLAKALQGNTTLT 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 550 WLNISDNHLEVFDYALIPTGLQW------LDIHANKITELGNYF---EIESQLALSTIDASSNQLTEITGSAIPNsvell 620
Cdd:COG5238 296 SLDLSVNRIGDEGAIALAEGLQGnktlhtLNLAYNGIGAQGAIAlakALQENTTLHSLDLSDNQIGDEGAIALAK----- 370
|
250 260 270
....*....|....*....|....*....|....*....
gi 2047518235 621 YLNDNliskvqsytffkkPNLTRVDLFGNKITTLDPNAL 659
Cdd:COG5238 371 YLEGN-------------TTLRELNLGKNNIGKQGAEAL 396
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
864-903 |
2.65e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 2.65e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2047518235 864 SLKELFLQYNRIASIANHTFDHLHGLKILRLDHNRLVEFN 903
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLS 41
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
374-455 |
2.73e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.11 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 374 NTFLGLGALHTVILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNKLL-QVPDALYDVPL 452
Cdd:PLN03150 436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSgRVPAALGGRLL 515
|
...
gi 2047518235 453 LRT 455
Cdd:PLN03150 516 HRA 518
|
|
| LRR_5 |
pfam13306 |
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ... |
235-358 |
4.05e-03 |
|
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
Pssm-ID: 463839 [Multi-domain] Cd Length: 127 Bit Score: 38.68 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 235 KLTDLRLqSNGLNYIADRAFEGLVSLSRLELSlNRLTNLPPELFSEAKhIKEIYLqNNSLNVLAPGIFSDLKQLLVLDLS 314
Cdd:pfam13306 12 SLTSITI-PSSLTSIGEYAFSNCTSLKSITLP-SSLTSIGSYAFYNCS-LTSITI-PSSLTSIGEYAFSNCSNLKSITLP 87
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2047518235 315 NNeLTSewINPATFRGlSKLILLDLSNNkITKLEPTIFRDLTSV 358
Cdd:pfam13306 88 SN-LTS--IGSYAFSN-CSLKSITIPSS-VTTIGSYAFSNCSNL 126
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
140-188 |
4.65e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 4.65e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2047518235 140 LDIAPQVFTSeLSKLQRLDLSQNNMWSVPDGFICPLARLSYLNLTQNRL 188
Cdd:pfam13855 14 TSLDDGAFKG-LSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
337-417 |
6.57e-03 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 38.98 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 337 LDLSNNKITKLEPtiFRDLTSVQVLRLQENFIESIGENTFLGLGALHTVILSNNRL-STVDHFTFSGLNSLALLSLDYNR 415
Cdd:pfam14580 47 IDFSDNEIRKLDG--FPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLqELGDLDPLASLKKLTFLSLLRNP 124
|
..
gi 2047518235 416 IS 417
Cdd:pfam14580 125 VT 126
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
465-536 |
7.27e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.57 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 465 NIDNASFR--------HMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQASFDNNTKLQAIRLDGNYLT 536
Cdd:PLN03150 424 GLDNQGLRgfipndisKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
616-660 |
8.40e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 8.40e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2047518235 616 SVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNALR 660
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS 46
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
36-437 |
9.90e-03 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 40.63 E-value: 9.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 36 RWDGYTeddltllcrLRTINSelentNFsvlHPENTVRLRLQcndglffQSSLSpgsfKQLTKLHALsieyckiANLSEG 115
Cdd:PLN03210 595 RWDKYP---------LRCMPS-----NF---RPENLVKLQMQ-------GSKLE----KLWDGVHSL-------TGLRNI 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 116 SFQG---LKQLVNLTLRT-----HNTDWSSIsLDIAPQVftSELSKLQRLDLSQ-NNMWSVPDGFicPLARLSYLNLTQ- 185
Cdd:PLN03210 640 DLRGsknLKEIPDLSMATnletlKLSDCSSL-VELPSSI--QYLNKLEDLDMSRcENLEILPTGI--NLKSLYRLNLSGc 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 186 NRLRDLsvfhfsASLSTRLSkkcgssivTLDLSHNTIDNLPpaifsglgklTDLRLQSNGLNYIADRAFEGLvsLSRLEL 265
Cdd:PLN03210 715 SRLKSF------PDISTNIS--------WLDLDETAIEEFP----------SNLRLENLDELILCEMKSEKL--WERVQP 768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 266 SLNRLTNLPPELfseakhiKEIYLQNNSLNVLAPGIFSDLKQLLVLDLS---NNELTSEWINpatfrgLSKLILLDLSNN 342
Cdd:PLN03210 769 LTPLMTMLSPSL-------TRLFLSDIPSLVELPSSIQNLHKLEHLEIEnciNLETLPTGIN------LESLESLDLSGC 835
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2047518235 343 KITKLEPTIFrdlTSVQVLRLQENFIESigentflglgalhtVILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQ 422
Cdd:PLN03210 836 SRLRTFPDIS---TNISDLNLSRTGIEE--------------VPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETV 898
|
410
....*....|....*
gi 2047518235 423 ALRNHSALQELHLNG 437
Cdd:PLN03210 899 DFSDCGALTEASWNG 913
|
|
| |
