33K [Ovine adenovirus 8]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Adeno_L433K_22K super family | cl12642 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
110-165 | 1.64e-13 | ||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. The actual alignment was detected with superfamily member pfam11081: Pssm-ID: 314108 Cd Length: 168 Bit Score: 65.41 E-value: 1.64e-13
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| Name | Accession | Description | Interval | E-value | ||
| Adeno_L433K_22K | pfam11081 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
110-165 | 1.64e-13 | ||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. Pssm-ID: 314108 Cd Length: 168 Bit Score: 65.41 E-value: 1.64e-13
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| Name | Accession | Description | Interval | E-value | ||
| Adeno_L433K_22K | pfam11081 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
110-165 | 1.64e-13 | ||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. Pssm-ID: 314108 Cd Length: 168 Bit Score: 65.41 E-value: 1.64e-13
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