NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2044804524|ref|WP_213461593|]
View 

DUF433 domain-containing protein [Thiocapsa sp.]

Protein Classification

DUF433 domain-containing protein( domain architecture ID 10006446)

DUF433 domain-containing protein similar to Mycobacterium tuberculosis antitoxin VapB45, the antitoxin component of a type II toxin-antitoxin (TA) module

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
COG2442 COG2442
Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];
3-54 1.56e-13

Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];


:

Pssm-ID: 441983  Cd Length: 68  Bit Score: 58.68  E-value: 1.56e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 2044804524  3 WQDRLSADANICHGKVCVKGTRVMVSVILDNLAEGETHQAIREGY-RVEEEDI 54
Cdd:COG2442    1 LLDRITIDPEILGGKPCIRGTRIPVETILELLAAGMSPEEILEDYpDLTLEDI 53
 
Name Accession Description Interval E-value
COG2442 COG2442
Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];
3-54 1.56e-13

Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];


Pssm-ID: 441983  Cd Length: 68  Bit Score: 58.68  E-value: 1.56e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 2044804524  3 WQDRLSADANICHGKVCVKGTRVMVSVILDNLAEGETHQAIREGY-RVEEEDI 54
Cdd:COG2442    1 LLDRITIDPEILGGKPCIRGTRIPVETILELLAAGMSPEEILEDYpDLTLEDI 53
DUF433 pfam04255
Protein of unknown function (DUF433);
10-54 2.95e-11

Protein of unknown function (DUF433);


Pssm-ID: 427822  Cd Length: 54  Bit Score: 52.81  E-value: 2.95e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 2044804524 10 DANICHGKVCVKGTRVMVSVILDNLAEGETHQAIREGY-RVEEEDI 54
Cdd:pfam04255  4 DPEILGGKPCIRGTRIPVEDILELLAAGMSPEEILEDYpDLTLEDI 49
 
Name Accession Description Interval E-value
COG2442 COG2442
Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];
3-54 1.56e-13

Predicted antitoxin component of a toxin-antitoxin system, DUF433 family [Defense mechanisms];


Pssm-ID: 441983  Cd Length: 68  Bit Score: 58.68  E-value: 1.56e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 2044804524  3 WQDRLSADANICHGKVCVKGTRVMVSVILDNLAEGETHQAIREGY-RVEEEDI 54
Cdd:COG2442    1 LLDRITIDPEILGGKPCIRGTRIPVETILELLAAGMSPEEILEDYpDLTLEDI 53
DUF433 pfam04255
Protein of unknown function (DUF433);
10-54 2.95e-11

Protein of unknown function (DUF433);


Pssm-ID: 427822  Cd Length: 54  Bit Score: 52.81  E-value: 2.95e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 2044804524 10 DANICHGKVCVKGTRVMVSVILDNLAEGETHQAIREGY-RVEEEDI 54
Cdd:pfam04255  4 DPEILGGKPCIRGTRIPVEDILELLAAGMSPEEILEDYpDLTLEDI 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH