|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-674 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1384.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMS 80
Cdd:CHL00025 18 VPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIML 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 81 ILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQK 160
Cdd:CHL00025 98 ILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 161 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGP 240
Cdd:CHL00025 178 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGP 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 241 TPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 320
Cdd:CHL00025 258 TPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 321 SYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK 400
Cdd:CHL00025 338 SYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 401 DEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNYSGKKNTPLYSISLWGKEGSkgikKKKLRLLTL 480
Cdd:CHL00025 418 DEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEES----KKINKLLLL 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 481 LTMNNNVGKS-ASFLTYKIGENVRNMTQPFITITHfgNKKADSYPYESDNTMLFPILVLVLFTSFVGFLGIPFNQEGVNL 559
Cdd:CHL00025 494 LTMNNNERVSfFSKKTYKIDGNVRNMIRSFITIFG--NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDL 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 560 DILSKWITPSINLLHKNLNNSVDWYEFVKDAVFSISIACFGIFIASFLYKPVYSSLQNLELINSFMKKGPKRILSDKIIN 639
Cdd:CHL00025 572 DILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIIN 651
|
650 660 670
....*....|....*....|....*....|....*
gi 2016345834 640 SIYDWSYNRGYIDAFYATSLTEGVRRLAELTHFFD 674
Cdd:CHL00025 652 VIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFD 686
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
3-667 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 671.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSIL 82
Cdd:PRK07376 20 VLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 83 ITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAF 162
Cdd:PRK07376 100 VTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 163 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 242
Cdd:PRK07376 180 VVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 243 ISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 322
Cdd:PRK07376 260 ISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 323 RSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDE 402
Cdd:PRK07376 340 SAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 403 ILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNahfqnysgkkntplysislwgkegskgikkkklrlltllt 482
Cdd:PRK07376 420 ILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFR---------------------------------------- 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 483 mnnnvGKSASFLTYKIGENVRNMTQPFITITHFGNKKADSYPYESDNTMLFPILVLVLFTSFVGFLGIPFNqegvnlDIL 562
Cdd:PRK07376 460 -----GNDKELQKELLAAADAPGHHEGHHEEHGEHHHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWN------NRF 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 563 SKWITPSINLLHKnlNNSVDWYEFVKDAVFSISIACFGIFIASFLYkpvyssLQNLELINSFMKKGPkrilsdkiinSIY 642
Cdd:PRK07376 529 EAFLHAPGEALEA--AAHFEWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFP----------PLY 590
|
650 660
....*....|....*....|....*
gi 2016345834 643 DWSYNRGYIDAFYATSLTEGVRRLA 667
Cdd:PRK07376 591 QFSLNKWYLDDIYEKLFVKGSRRLA 615
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-439 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 532.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPTATKNLRRMWAFqSVLLLSIVMIFSINLSI-QQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIM 79
Cdd:COG1009 7 IPLLPLLGALLAGLLGRRLGRRAAG-WLAALAPLAAFVLSLLLfPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 80 SILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQ 159
Cdd:COG1009 86 LLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAAR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 160 KAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEG 239
Cdd:COG1009 166 KAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 240 PTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 319
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 320 GSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWS 399
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFS 391
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2016345834 400 KDEILNDSW---LYSPIFAIIAWFTAGLTAFYMFRIYLLTFEG 439
Cdd:COG1009 392 KEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
30-439 |
1.88e-180 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 526.65 E-value: 1.88e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 30 LLSIVMIFSINLSIQQinssSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFA 109
Cdd:PRK06590 44 LLSLVVFFDFLLGGGR----AFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 110 YMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 189
Cdd:PRK06590 120 YLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 190 dlfEIFNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIV 269
Cdd:PRK06590 200 ---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 270 IPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 349
Cdd:PRK06590 277 SPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 350 MetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWFTAGLTAFY 428
Cdd:PRK06590 357 M--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFY 428
|
410
....*....|.
gi 2016345834 429 MFRIYLLTFEG 439
Cdd:PRK06590 429 SFRLIFLVFHG 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
29-673 |
2.20e-154 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 459.44 E-value: 2.20e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 29 LLLSIVMIFSINLSIQQInssSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFF 108
Cdd:TIGR01974 41 AALSAFVFVDFFLNGEGE---AFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 109 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 188
Cdd:TIGR01974 118 AYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 189 RDLFEIFNNLIYNnevnflFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 268
Cdd:TIGR01974 198 QEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 269 VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIH 348
Cdd:TIGR01974 272 LSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 349 SMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSW--LYSPIFAIIAWFTAGLTA 426
Cdd:TIGR01974 352 AM--------HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTA 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 427 FYMFRIYLLTFEGHLNAHfqnysgkkntplysislwgkegskgikkkklrlltlltmnnnvgksasfltykigenvrnmt 506
Cdd:TIGR01974 424 FYSFRLIFMVFHGKERHE-------------------------------------------------------------- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 507 qpfitithfgnkkADSYPYESDNTMLFPILVLVLFTSFVGFLGIPFnqEGVNLDILSKWITPSINLLHKNLnnsvdwyeF 586
Cdd:TIGR01974 442 -------------ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPL--FEFLKGVLPTSAEPALEHHHVPA--------L 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 587 VKDAVFSISIAcfGIFIASFLYkpvyssLQNLELINSFMKKGPKrilsdkiinsIYDWSYNRGYIDAFYATSLTEGVRRL 666
Cdd:TIGR01974 499 EIWSPTAVAIL--GILLAYLLY------LGNPTLPAKIAQRHSG----------LYRLLLNKWYFDELYDKVFVKPYLFL 560
|
....*..
gi 2016345834 667 AELTHFF 673
Cdd:TIGR01974 561 GKLLWKD 567
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
431-674 |
2.05e-148 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 430.50 E-value: 2.05e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 431 RIYLLTFEGHLNAHFQNYSGKKNTPLYSISLWGKEGSKGIKKKKLRLLTLlTMNNNvgKSASFL---TYKIGENVRNMTQ 507
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLL-TMNNN--EKVSFFskkTYRIDGNVRNMTR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 508 PFITITHFGNKKADSYPYESDNTMLFPILVLVLFTSFVGFLGIPFNQEGVNLDILSKWITPSINLLHKNLNNSVDWYEFV 587
Cdd:pfam01010 78 PFITITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 588 KDAVFSISIACFGIFIASFLYKPVYSSLQNLELINSFMKKGPKRILSDKIINSIYDWSYNRGYIDAFYATSLTEGVRRLA 667
Cdd:pfam01010 158 TNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLA 237
|
....*..
gi 2016345834 668 ELTHFFD 674
Cdd:pfam01010 238 ELTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
46-443 |
7.77e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 352.39 E-value: 7.77e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 46 INSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSS 125
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 126 NLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVn 205
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 206 flfvTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITV 285
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 286 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspNKSQNMV 365
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 366 LMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWFTAGLTAFYMFRIYLLTFEGHLNA 443
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
29-437 |
3.27e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 350.53 E-value: 3.27e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 29 LLLSIVMIFSINLsiqqiNSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFF 108
Cdd:MTH00020 40 LSWSFLIFYEILF-----NSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 109 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 188
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 189 RDLFEIFNNLIYNNevnflfVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 268
Cdd:MTH00020 195 SSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 269 VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIH 348
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 349 SMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWFTAGLTA 426
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410
....*....|.
gi 2016345834 427 FYMFRIYLLTF 437
Cdd:MTH00020 421 FYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
3-440 |
5.97e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 297.25 E-value: 5.97e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFsinLSIQQINSSSIYQhvWSWIINNDFSLEFGYLIDPLTSIMSIL 82
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 83 ITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAF 162
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 163 VTNRVGDFGLLLGILGFYWITGSFEFrdlfeifnNLIYNNEVNFLFVTFCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTP 242
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEI--------SQLFILNLDLTLFLLGLLL---AAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 243 ISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 322
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 323 RSALFHLITHAYSKALLFLGSGSIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDE 402
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2016345834 403 IL---NDSWLYSpiFAIIAWFTA-GLTAFYMFRIYLLTFEGH 440
Cdd:MTH00211 389 ILesmNGSYLNA--WALLLTLLAtSLTAAYSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
46-404 |
7.98e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 285.70 E-value: 7.98e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 46 INSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSS 125
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 126 NLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 199
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 200 YNNEVNFL----FVTFcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMN 275
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 276 FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMETiv 354
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2016345834 355 gyspnKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 404
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
124-423 |
1.13e-85 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 270.72 E-value: 1.13e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 124 SSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNE 203
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 204 VNFLFvtfcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPHIMNFISLIG 281
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 282 IITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMetivgysp 358
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2016345834 359 NKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAG 423
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
27-437 |
1.11e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 273.77 E-value: 1.11e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 27 SVLLLSIVMIFSINLSIQQINSSsiyqhVWSWIINNDFSLEFGYLIDpltsIMSILITTVGIMV----LVYSDNYMSHDQ 102
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 103 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWI 182
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 183 TGSFefrDLFEIFnnliYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 262
Cdd:MTH00208 216 FNSW---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 263 LLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 342
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 343 SGSIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAII 417
Cdd:MTH00208 369 SGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 2016345834 418 AWFtagLTAFYMFRIYLLTF 437
Cdd:MTH00208 441 ATL---LTAVYSFRIIFFCF 457
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
29-439 |
1.73e-79 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 264.85 E-value: 1.73e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 29 LLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFF 108
Cdd:PRK07390 44 LLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 109 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 188
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 189 RDLFEIFNnliyNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFI 268
Cdd:PRK07390 204 SDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 269 VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIH 348
Cdd:PRK07390 279 LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIIL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 349 SmetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFY 428
Cdd:PRK07390 359 T---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFN 429
|
410
....*....|.
gi 2016345834 429 MFRIYLLTFEG 439
Cdd:PRK07390 430 LTRVFRLVFLG 440
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
33-455 |
6.78e-79 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 262.79 E-value: 6.78e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 33 IVMIFSINLSIQQINSSsiyqhvWSWIINNDFSLEFGYLIDPLtSIMSI---LITTVGIMVlvYSDNYMSHDQGYLRFFA 109
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 110 YMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 189
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 190 DLFeifnnliYNNEVNFLFvtfcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIV 269
Cdd:MTH00004 200 QLF-------SPTQTPTLP----LLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 270 IPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 349
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 350 MetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWFTAgLTA 426
Cdd:MTH00004 349 L--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTA 419
|
410 420
....*....|....*....|....*....
gi 2016345834 427 FYMFRIYLLTFEGHlNAHFQNYSGKKNTP 455
Cdd:MTH00004 420 AYSLRMILLVQTGF-PRTPPTTPINENTP 447
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
3-432 |
1.62e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 261.77 E-value: 1.62e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFP--TATKNLRRMWAFQSV---LLLSIV--MIFsINLSIQQINSSsiyqhvWSWIINNDFSLEFGYLIDpl 75
Cdd:MTH00066 11 MILSLLLLILPllLPKSNNFHTNVKTSVktaFFISLIplMIF-INQGLESITTS------FHWMNIFNFNINSSFKFD-- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 76 tsIMSILITTVGIMV----LVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 151
Cdd:MTH00066 82 --QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHAR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 152 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFLfvtfcaVLLFAGAVAKSAQFPLHV 231
Cdd:MTH00066 160 ADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPL------LGLILAAAGKSAQFGLHP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 232 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 311
Cdd:MTH00066 229 WLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 312 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGI 391
Cdd:MTH00066 309 LMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGT 380
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2016345834 392 PPLACFWSKDEI---LNDSWL--YSPIFAIIAwftAGLTAFYMFRI 432
Cdd:MTH00066 381 PFLAGFFSKDAIieaMNTSNLnsWALILTLIA---TSFTAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-433 |
5.91e-76 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 250.06 E-value: 5.91e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPtatKNLRRMWAFqSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIinndFSLEFGYLIDPLTSIMS 80
Cdd:COG0651 11 LPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSALFL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 81 ILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPvAANACQK 160
Cdd:COG0651 83 LLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 161 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAM-EG 239
Cdd:COG0651 162 YLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 240 PTPISALIHAAtMVAAGIFLVARLLPLFI---VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLA 316
Cdd:COG0651 236 PSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 317 LGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspnKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPP 393
Cdd:COG0651 315 LGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2016345834 394 LACFWSKDEILNDSW-LYSPIFAIIAWFTAGLTAFYMFRIY 433
Cdd:COG0651 386 LSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-447 |
7.21e-76 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 258.70 E-value: 7.21e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 43 IQQINSSSIYQHVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLV 122
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 123 TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNN 202
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 203 EVNFLFVtfcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGI 282
Cdd:PRK12647 192 PLYLAIL----LLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 283 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspn 359
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETGT------- 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 360 ksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN-----DSWlySPIFAIIAWFTAGLTAFYMFRIYL 434
Cdd:PRK12647 341 --RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEalleaPLW--SLILTVAAVLGNALMVAVAFLVGI 416
|
410
....*....|...
gi 2016345834 435 LTFEGHLNAHFQN 447
Cdd:PRK12647 417 KPFLGKLVETPKH 429
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
28-440 |
1.01e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 250.61 E-value: 1.01e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 28 VLLLSIVmIFSINLS-IQQINSSSIYQHVWSWIINndFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYL- 105
Cdd:PRK12645 34 VLPVPVV-LFIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLg 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 106 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 185
Cdd:PRK12645 111 NFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 186 FEFRDLFEIFNNLiynneVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP 265
Cdd:PRK12645 191 FSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTP 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 266 LFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS----------------YRSALFHL 329
Cdd:PRK12645 266 IFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHL 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 330 ITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN---- 405
Cdd:PRK12645 346 INHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmln 416
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2016345834 406 ---------DSWLYspIFAIIAWFTAGLTAFYMFRIYLLTFEGH 440
Cdd:PRK12645 417 ateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
97-432 |
1.46e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 243.59 E-value: 1.46e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 97 YMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLllgI 176
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 177 LGFYWI---TGSFEFRDLFEIFNNLIynnevnflfVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 253
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKDFD---------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 254 AAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 333
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 334 YSKALLFLGSGSIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEI---LNDSWL- 409
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....
gi 2016345834 410 -YSPIFAIIAwftAGLTAFYMFRI 432
Cdd:MTH00137 411 aWALTLTLIA---TSFTAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
56-440 |
4.77e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 241.68 E-value: 4.77e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 56 WSWIINNDFSLEFGYLIDpLTSIMSI---LITTVGIMVlvYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYI 132
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 133 FWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFLFVTfc 212
Cdd:MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNLPLMG-- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 213 avLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLA 292
Cdd:MTH00108 216 --LLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 293 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspNKSQNMVLMGGLTK 372
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFK 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2016345834 373 HVPITKTAFLLGTLSLCGIPPLACFWSKD---EILNDSwlYSPIFAIIAWFTA-GLTAFYMFRIYLLTFEGH 440
Cdd:MTH00108 365 TLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNAWALLITLIAtSLTAAYSTRIIFFALLGQ 434
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
64-439 |
8.56e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 245.53 E-value: 8.56e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 64 FSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 143
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 144 LIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNFLFVTFCAVLLFAGAVAK 223
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 224 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLA 303
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 304 YSTMSQLGYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLM 367
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 368 GGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWFTAGLTAFYMFRIYL 434
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIH 448
|
....*
gi 2016345834 435 LTFEG 439
Cdd:TIGR00940 449 GVFFG 453
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
5-417 |
3.24e-69 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 233.71 E-value: 3.24e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 5 IGVGLLLFPTATKnlRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWiinNDFSLeFGYLIDPLTSIMSILIT 84
Cdd:PRK06525 12 FIGALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 85 TVGIMVLVYSDNYMS-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAANA 157
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 158 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYnneVNFLFVTFcavllfaGAVAKSAQFPLHVWLPDAM 237
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGILF-------AAWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 238 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLA 316
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 317 LGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCG 390
Cdd:PRK06525 315 LSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
410 420
....*....|....*....|....*..
gi 2016345834 391 IPPLACFWSKDEILNDSWLYSPIFAII 417
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-431 |
4.72e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 234.43 E-value: 4.72e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 55 VWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIF 133
Cdd:PRK12644 57 VVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 134 WELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliyNNEVNFLFVTFCA 213
Cdd:PRK12644 135 WELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVAV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 214 VLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLAL 293
Cdd:PRK12644 207 VLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRAL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 294 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGL 370
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSGL 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2016345834 371 TKHVPITKTAFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWFTAG--LTAFYMFR 431
Cdd:PRK12644 358 GRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
24-401 |
3.35e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 229.72 E-value: 3.35e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 24 AFQSVLLLSIVMIFSInlsiqqinSSSIYQHVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQG 103
Cdd:PRK12649 40 AFTSFALIAQVAPEVI--------HGTIITGSISWL--PSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKED 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 104 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 183
Cdd:PRK12649 110 LPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVIT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 184 GSFEFRDLFEifNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 263
Cdd:PRK12649 190 GTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 264 LPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR-------SALFHLITHAYSK 336
Cdd:PRK12649 268 HPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFK 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2016345834 337 ALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD 401
Cdd:PRK12649 348 ACLFLVAGIVAHEAAT---------RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-418 |
1.52e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 230.08 E-value: 1.52e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 10 LLFPTATKNLRrMWAFQSVLLLSIVMIFSinlSIQQINSSSIYQHVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIM 89
Cdd:PRK12648 18 ALLPRNARNAE-AWLAGLVALAALVLLAL---LYPAVAAGEVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 90 VLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGD 169
Cdd:PRK12648 92 VVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGG 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 170 FGLLLGILGFYWITGSFefrDLFEIFNN--LIYNNEvnfLFVTfCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALI 247
Cdd:PRK12648 172 LALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHP---LYPP-ALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 248 HAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS--- 324
Cdd:PRK12648 245 HSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAava 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 325 ALFHLITHAYSKALLFLGSGSIIHsmETivgyspnKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK---- 400
Cdd:PRK12648 325 AIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKemff 395
|
410 420
....*....|....*....|...
gi 2016345834 401 DEILNDSWLYS-----PIFAIIA 418
Cdd:PRK12648 396 AETLDTHLLGSldwllPVAATLA 418
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
25-461 |
7.15e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 216.16 E-value: 7.15e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 25 FQSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGY 104
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 105 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWITG 184
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 185 SFEFRDLFEIFNNLIYNNEVNFLFVTfcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 264
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 265 PLFIvIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 344
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 345 SIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAWFTA 422
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMsnLNFFIFFLFFFST 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2016345834 423 GLTAFYMFRIYLLTFEGHLNAH-FQNYSGKKNTPLYSISL 461
Cdd:MTH00165 386 GLTVSYSFRLIYYSMSGDFNLKsLNNLSDESKFMLKSMIL 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
58-442 |
1.53e-60 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 216.93 E-value: 1.53e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 58 WIINNDFSLEFgyLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWEL 136
Cdd:PRK12646 64 WMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 137 VGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiyNNEVNFLFVTFCAVLl 216
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 217 faGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQK 296
Cdd:PRK12646 219 --GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 297 DIKRGLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspn 359
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEAGT------- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 360 ksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD----------EILNDSWLYSPIFAIIAWFTAGLTAFYM 429
Cdd:PRK12646 370 --RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYA 447
|
410
....*....|...
gi 2016345834 430 FRIYLLTFEGHLN 442
Cdd:PRK12646 448 LYMVKEVFWGKYD 460
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-448 |
1.45e-57 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 202.23 E-value: 1.45e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPTATKNLRRMWAFQS---VLLLSIVMIFSINLSiqqiNSSSIYQHVWSWIinNDFSLEFGYLIDPLTS 77
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPG----TGGFQFVESYPWI--PSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 78 IMSILITTVGIMVLVYSDNYMSHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPVAA 155
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 156 NacqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVTFcavlLFAGAVaKSAQFPLHVWLPD 235
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFLAF----FIAFAV-KVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 236 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 309
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 310 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspnKSQNMVLMGGLTKHVPITKTAFLLGTL 386
Cdd:COG1008 311 MGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAAL 381
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2016345834 387 SLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNY 448
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
28-453 |
5.26e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 202.95 E-value: 5.26e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 28 VLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRF 107
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 108 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYwitgsfe 187
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 188 frdlfeIFNNL-IYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 266
Cdd:MTH00209 158 ------MHGNWnIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 267 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 346
Cdd:MTH00209 232 LFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 347 IHSMetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILnDSWLYS--PIFAIIAWFTA-G 423
Cdd:MTH00209 312 IHSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStS 382
|
410 420 430
....*....|....*....|....*....|
gi 2016345834 424 LTAFYMFRIYLLTFEGHLNAHFQNYSGKKN 453
Cdd:MTH00209 383 LTAAYSMRLSYFSLWGPNSSKSLNSSFDQN 412
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
27-442 |
1.10e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 199.30 E-value: 1.10e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 27 SVLLLSIVMIFSINLSIQQINSSSIyqhVWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGY 104
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGISL---IFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 105 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFYwITG 184
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 185 SFefrdlfeifnNLIYNNEVNFLFvtFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 264
Cdd:MTH00151 163 HW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 265 PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 344
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 345 SIIHSmetivgYSPNksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAIIAWFT 421
Cdd:MTH00151 311 SIIHS------SSGT--QDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPtslLMVLLMFVG 381
|
410 420
....*....|....*....|.
gi 2016345834 422 AGLTAFYMFRIYLLTFEGHLN 442
Cdd:MTH00151 382 VGLTALYSARLSFCLVWGSMK 402
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
27-434 |
6.12e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 197.29 E-value: 6.12e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 27 SVLLLSI-VMIFSINLSIQQINSSSIYQhvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYL 105
Cdd:MTH00207 11 SYLLWFMsILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 106 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGF-----Y 180
Cdd:MTH00207 89 RFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI-GWtlnqgH 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 181 WITGSFEFRDlfeiFNNLIynnevnflfvtfcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 260
Cdd:MTH00207 167 WSITNMWQTD----MNNYI-------------ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 261 ARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLF 340
Cdd:MTH00207 230 IRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLF 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 341 LGSGSIIHSMEtivgyspnKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAII 417
Cdd:MTH00207 310 VCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL-ESSLFYPhnsLMILM 380
|
410
....*....|....*..
gi 2016345834 418 AWFTAGLTAFYMFRIYL 434
Cdd:MTH00207 381 IFLATALTAAYSTRFTL 397
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-432 |
2.88e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 187.78 E-value: 2.88e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 4 LIGVGLLLFPTATKNLRRMWAFqSVLLLSIVMifSINLSIQQINSSSIYQHVWSWIINndFSLEFGylIDPLTSIMSILI 83
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALAL-LVAALTFAL--AISLLPQVLDGGVIAYVVGGWPPG--IGIELR--ADSLSALFLLVT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 84 TTVGIMVLVYSDNYMSHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpVAANACQKAFV 163
Cdd:PRK08375 87 SILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 164 TNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliynnEVNFLFVTFcAVLLFAGAVaKSAQFPLHVWLPDAMEGPTPI 243
Cdd:PRK08375 164 VGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPRAYPAAPPV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 244 SALIHAATMVAAGIFLVARLL-----PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 318
Cdd:PRK08375 236 VTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 319 MGSYRS---ALFHLITHAYSKALLFLGSGSIihsMETIvgyspnKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLA 395
Cdd:PRK08375 316 LLTPLAlaaGLLHLLHHALMKGALFLAAGAI---EVTY------GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2016345834 396 CFWSKDEIL---NDSWLYSPIFAIIAwfTAGLTAFYMFRI 432
Cdd:PRK08375 387 GFVSKWYLVvgaVEAGQWLVLAVLLA--SSLLALLYFLRI 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-430 |
9.48e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 193.34 E-value: 9.48e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVwSWI---INNDFSLEFGYLIDPLTS 77
Cdd:PRK12650 4 VLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALTWSV-TWIpdlLGNGVDVNLALRADALSL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 78 IMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwfTRPVAANA 157
Cdd:PRK12650 83 FFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 158 CQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVTfcAVLLFAGAVAKSAQFPLHVWLPDAM 237
Cdd:PRK12650 161 SIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWLPEAM 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 238 EGPTPISALIHAATMVAAGIFLVARLLPLF--IVIPHIMNFIslIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMML 315
Cdd:PRK12650 236 AAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWLLII--VGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 316 ALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIP 392
Cdd:PRK12650 314 TIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQAGT---------RDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2016345834 393 PLACFWSKDEILnDSWLYSPIFAIIAWF---TAGLTAFYMF 430
Cdd:PRK12650 385 PLFGFVSKEGML-TAFLEAPGGNAGVVLllvGAALGAVFTF 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-447 |
1.57e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 183.76 E-value: 1.57e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 72 IDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 151
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 152 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrdlfeiFNNLIYNNEVNFLFVTFCAVLLFAGAVA-KSAQFPLH 230
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 231 VWLPDAM-EGPTPISALIHAATmvAAGIFLVARLLpLFIVIPHIMN-----FISLIGIITVFLGATLALAQKDIKRGLAY 304
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARVL-FSIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 305 STMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGG 369
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGG 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2016345834 370 LTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQN 447
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMN 466
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-439 |
9.48e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 181.71 E-value: 9.48e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 70 YLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 149
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 150 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEV----NFLFVTFCAVLLFAGAVA-KS 224
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 225 AQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPHIMNFISLIGIITVFLGATLALAQ 295
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 296 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspnKSQNMVLMGGLTK 372
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGR 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2016345834 373 HVPITKTAFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWFTAGLTAFYMFRIYLLTFEG 439
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
70-432 |
2.99e-43 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 162.21 E-value: 2.99e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 70 YLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 148
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 149 FTRPVAANACQKAFVTnrvGDFG---LLLGILGFYWITGSFefrDLFEIFNNLIYNNEVNFLFVtFCAVLLFAGAVAKSA 225
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLL-LGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 226 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGL 302
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 303 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeTIVGYSPNKSQNMVLMGGLTKHVPITKT 379
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2016345834 380 AFLLGTLSLCGIPPLACFWSKDEILNDSW---LYspIFAIIAWFTAGLTAFYMFRI 432
Cdd:COG1007 370 AMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
70-432 |
3.06e-41 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 156.90 E-value: 3.06e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 70 YLIDPLTSIMSILITTVGIMVLVYSDNYMShDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 149
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 150 TRPVAANACQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDlfeIFNNLIYNNEVNFLFVtFCAVLLFAGAVAKSAQ 226
Cdd:PRK05777 148 DRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLL-FGLVFLLVGLAFKLSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 227 FPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLA 303
Cdd:PRK05777 221 VPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 304 YSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMETIVGYSPNKSQnmvlMGGLTKHVPITKTA 380
Cdd:PRK05777 300 YSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAV 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2016345834 381 FLLGTLSLCGIPPLACFWSKDEIL------NDSWLyspifAIIAWFTAGLTAFYMFRI 432
Cdd:PRK05777 372 MTIFMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-442 |
1.03e-40 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 155.75 E-value: 1.03e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 4 LIGVGLLLFptATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVW--SWIINNDFSLEFGylIDPLTSIMSI 81
Cdd:PRK05846 14 LIGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEkhPWIPRFGISYHLG--VDGISLLLVV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 82 LITTVGIMVLVYSDNYMSHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FTRPVAANa 157
Cdd:PRK05846 90 LTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIYAAT- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 158 cqKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFeifNNLIYNNEVNFLFVTFcavlLFAGAVaKSAQFPLHVWL 233
Cdd:PRK05846 165 --KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF----FIAFAV-KMPMFPLHTWL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 234 PDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIPHIMN-FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 311
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFApIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 312 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSL 388
Cdd:PRK05846 315 FVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRLHT---------RDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2016345834 389 CGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLN 442
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-347 |
1.52e-39 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 152.54 E-value: 1.52e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLF-PTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSiyqhvwSWIINndfslefgyliDPLTSIM 79
Cdd:PRK08168 12 VLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV-----------SGLGLVM 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 80 SILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQ 159
Cdd:PRK08168 75 AALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAH 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 160 KAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnnliYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEG 239
Cdd:PRK08168 155 KKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 240 PTPISALIHAAtMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 319
Cdd:PRK08168 230 PTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGL 308
|
330 340
....*....|....*....|....*...
gi 2016345834 320 GSYRSALFHLITHAYSKALLFLGSGSII 347
Cdd:PRK08168 309 GLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
32-441 |
1.94e-39 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 154.00 E-value: 1.94e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 32 SIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYLIdpLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYM 111
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 112 SFfsTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdl 191
Cdd:PRK08668 107 SL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF--- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 192 FEIFNNLIYNNEVNFLFVTFcaVLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP--- 265
Cdd:PRK08668 180 ADISQGLINDTSTGFALIVF--LFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtk 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 266 LFIVIPHIMN------FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSK 336
Cdd:PRK08668 258 LFSEFGTYRGvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFK 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 337 ALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDswLYS---PI 413
Cdd:PRK08668 338 GLFFLIFAAVIYRTGT---------TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEA--LISkgmPI 406
|
410 420
....*....|....*....|....*...
gi 2016345834 414 FAIIAWFTAGLTAFYMFRIYLLTFEGHL 441
Cdd:PRK08668 407 TAFMAFFGSIGSFLYVFRPLAGVFLGQL 434
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
72-439 |
1.45e-38 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 151.96 E-value: 1.45e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 72 IDPLTSIMSILITTVGIMVLVYSDNYMSHDQGY----LRFFayMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 147
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 148 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifnnliYNNEVNFLFVTFcaVLLFAGAVAKSAQF 227
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA------AHLSPFWASLVF--LLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 228 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVAR----LLPL------FIVIphimnfisLIGIITVFLGATLALAQK 296
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvfdLLGApgwwwgVLVL--------ALGAISAVLGVLYALAEH 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 297 DIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQ 362
Cdd:PRK06521 299 DLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------R 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 363 NMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWFTAGLTAFYMFR 431
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVK 449
|
....*...
gi 2016345834 432 IYLLTFEG 439
Cdd:PRK06521 450 FYGITFLG 457
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-448 |
8.41e-38 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 147.01 E-value: 8.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 4 LIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIinNDFSLEFGYLIDPLTSIMSILI 83
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTEDIPWI--PALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 84 TTVGIMVLVYSDNYMSHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPVAANACQKAFV 163
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 164 TNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVNFLFVTFcavlLFAGAVaKSAQFPLHVWLPDAM-EGPT 241
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFLAF----FIAFAV-KVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 242 PISALIHAATMVAAGIFLVARLLPLFiviPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 317
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLF---PDASLyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 318 GMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPL 394
Cdd:TIGR01972 313 FSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2016345834 395 ACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNY 448
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
64-437 |
8.33e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 141.98 E-value: 8.33e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 64 FSLEFGYLIDPLtsIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 143
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 144 LIGFWFTrpvaANACQKA---FVTNRVGDFGLLLGILGFywitgsfefrdlfeIFNNLIYNNEVNFLFVTFcaVLLFAGA 220
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGF--------------IFSSYYFFSFSFFSSSMI--LMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 221 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpHIMNFISLIGIITVFLGATLALAQKDIKR 300
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 301 GLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspNKSQNMVLMGGLTKHVPITKTA 380
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN--------FGQQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2016345834 381 FLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAWFTAGLTAFYMFRIYLLTF 437
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-456 |
1.15e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 141.11 E-value: 1.15e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 58 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 135
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 136 LVGMCSYLLIGFWFTRPVAAnacqkafvtnrvgdfgLLLGILGFYWITGSFEFRD----LFEIFNNLIYNNEVNFLFVTF 211
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLS----------------GGYKYLKILMISALLLFLPavilIYTKTGNLDFVSGGLFSKNQS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 212 CAVLL-FAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIM------NFISLIGIIT 284
Cdd:PRK06589 211 IILLLmFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 285 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPNKS 361
Cdd:PRK06589 291 IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 362 QNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLT 436
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSI 441
|
410 420
....*....|....*....|
gi 2016345834 437 FEGHLNahfQNYSGKKNTPL 456
Cdd:PRK06589 442 YKPSLS---ENSFITKSLPY 458
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
3-400 |
2.87e-35 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 141.79 E-value: 2.87e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFPTATK---NLRRMWAFQSVL-LLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEfgylIDPLTSI 78
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 79 MSILITTVGIMVLVYSDNYMSHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAA 155
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 156 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPD 235
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 236 AMEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPHIM--NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 312
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 313 MMLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHVPITK 378
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 2016345834 379 TAFLLGTLSLCGIPPLACFWSK 400
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-455 |
2.17e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.92 E-value: 2.17e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 2 PMLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSssiyqhvwswiinndfsLEFGYLIDPLTSIMSI 81
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLDN-----------------FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 82 LITTVGIMVLVYSdnyMSHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKA 161
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 162 FVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnflfVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 241
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 242 PISALIHAATMVAAGIFLVARLLPLFIVIPHImnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 321
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 322 yrsALFHLiTHAYSKALLFLGSGSIihsmetivgYSPNKSQNMVLMGGLTKHVPITktaflLGTLSLCGIPPLACFWSKD 401
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2016345834 402 EILndsWLYSPIFAIIAWFTAGLTAFYMFRIYLLtfeghlnAHFQNYSGKKNTP 455
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFL-------PFSADDEDKKPLP 397
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
72-404 |
2.63e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 125.26 E-value: 2.63e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 72 IDPLTSIMSILITTVGIMVLVYSDNYMSHD--QGYLRFFAYMSFFSTsmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 149
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 150 TRPvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNliynneVNFLFVTFCAVLLFAGAVAKSAQFPL 229
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 230 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIPHIMNFISLI---GIITVFLGATLALAQKDIKRGLAYS 305
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 306 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspnKSQNMVLMGGLTKHVPITKTAFL 382
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340
....*....|....*....|..
gi 2016345834 383 LGTLSLCGIPPLACFWSKDEIL 404
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-399 |
2.91e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 125.04 E-value: 2.91e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLFPtatknLRRMWAFQSVLLLSIVMIFSINLSIQQINSSSIyqhvwswiinndFSLEFGYLIDPLTSIMS 80
Cdd:PRK06458 13 IPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLWFFIDDLNVFFL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 81 ILITTVGIMVLVYSDNYMSHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRp 152
Cdd:PRK06458 76 ALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTR- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 153 VAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNFLFVTFCAVLLFAGAVAKSAQFPLH 230
Cdd:PRK06458 155 ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGFGTKVGLFPMH 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 231 VWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLLPLFIVIphimnfisliGIITVFLGATLALAQKD 297
Cdd:PRK06458 235 AWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSVLVAAFFLLRQRD 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 298 IKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspnksQNMVLMGGLTKHV 374
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------RDINVIRGLLKVS 375
|
410 420
....*....|....*....|....*
gi 2016345834 375 PITKTAFLLGTLSLCGIPPLACFWS 399
Cdd:PRK06458 376 PLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-432 |
3.77e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 124.29 E-value: 3.77e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 7 VGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQQINSSsiyqhVWSWIINNDFSLEFGylidpltsiMSILITTV 86
Cdd:TIGR01770 19 LYGLFYSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFT-----GFSFFIVDNFALLIK---------LILLLSTL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 87 GIMVLVYSDNYMSHDQgYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNR 166
Cdd:TIGR01770 85 LTFFFALSYLSKEKIN-KFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 167 VGDFGLLLGILGFYWITGSFEFRDLFEIFNNlIYNNEVNFLFvtfCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISA 245
Cdd:TIGR01770 164 FSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLLL---GIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 246 LIHAATMVAA-GIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS--- 321
Cdd:TIGR01770 240 FFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTleg 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 322 YRSALFHLITHAYSKALLFlgsgSIIHSMETivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD 401
Cdd:TIGR01770 320 IKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKF 392
|
410 420 430
....*....|....*....|....*....|....*.
gi 2016345834 402 EIL-----NDSWLyspiFAIIAWFTAGLTAFYMFRI 432
Cdd:TIGR01770 393 YVFfallkSGLYW----LAVIAVLTSVIGAFYYLRV 424
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-439 |
4.44e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 118.51 E-value: 4.44e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVgLLLFPTATKNLRRMWAFQSVLLLSIVMIfsinlsiqqINSSSIYQHVWSWIINNDFSLEFG--YLIDPLTSI 78
Cdd:PRK07691 12 IPVITAI-LLIFLGKRPIIQRYVALIGSLLTLVAAI---------ILVANVYKHGIQTLELGNWKAPFGivFVADMFAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 79 MSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpVAANAC 158
Cdd:PRK07691 82 LVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRES 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 159 QKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflFVTFCAVLLFAGAVAKSAQFPLHVWLPDAME 238
Cdd:PRK07691 161 IKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGSYY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 239 GP-TPISALIhAATMVAAGIFLVARLLPLFIviPHIMNF----ISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM 313
Cdd:PRK07691 238 APpIAIAALF-GALLTKVGVYAIARTFTLFF--SHDTSFthylILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 314 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPNKSqnmvlMGGLTKHVPITKTAFLLGTLSLCG 390
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2016345834 391 IPPLACFWSKDEILNDSWLY-SPIFAIIAWFTAGLTAFYMFRIYLLTFEG 439
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
72-370 |
5.13e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 118.60 E-value: 5.13e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 72 IDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGMCSYLLIGFWF 149
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 150 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeifNNLIYNNEVNF--LFVTFCAVLLFAGAVAKSAQF 227
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 228 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPHIMNFIslIGIITVFLGATLALAQKDIKRGLAYST 306
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2016345834 307 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQNMVLMGGL 370
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
27-437 |
6.02e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 112.28 E-value: 6.02e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 27 SVLLLSIVMIFSINLSIQQINSSSIYqhvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLR 106
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 107 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLgILGFYWITGSf 186
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 187 efrdlfeifnnliynneVNFLFVTFCAVLLFAgavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 266
Cdd:MTH00063 155 -----------------GSFLCCLFFFLIVFT----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 267 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 346
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 347 ihsmetIVGYSPNKSQNMVLMGGLTKHVPITKTAFLLgtLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWFTAGL 424
Cdd:MTH00063 293 ------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 2016345834 425 TAFYMFRIYLLTF 437
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
63-400 |
1.22e-25 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.91 E-value: 1.22e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 63 DFSLEFgYLIDPLTSIMSILITTVGIMVLVYSdnymSHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGMCSY 142
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTST 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 143 LLIgfWFTR-PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLiynnevnflfvtfCAVLLFAGAV 221
Cdd:PRK12668 131 FLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLGGT-------------AAWLILIGFG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 222 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIphimnfISLIGIITVFlGATLALAQKDIKRG 301
Cdd:PRK12668 195 VNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRRL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 302 LAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETIvgyspnksqNMVLMGGLTKHVPITK 378
Cdd:PRK12668 268 LSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTE---------KLTELGGLYRSMPLTA 338
|
330 340
....*....|....*....|..
gi 2016345834 379 TAFLLGTLSLCGIPPLACFWSK 400
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSK 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-432 |
1.88e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 107.51 E-value: 1.88e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 1 VPMLIGVGLLLfptaTKNLRRMWAFqSVLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEfgylIDPLTSIMS 80
Cdd:PRK12662 12 IPLLSAVVCAL----LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATML 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 81 ILITTVGIMVLVYSdNYMSHDQ----GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPvAAN 156
Cdd:PRK12662 83 VLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 157 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNN--EVNFLFVtfcavllFAGAVAKSAQFPLHVWLP 234
Cdd:PRK12662 161 AAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFI-------MVGLFIKAALFPFHKWLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 235 DAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 307
Cdd:PRK12662 234 QAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 308 SQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSIIHSMETIvgyspnksqNMVLMGGLTKHVPITKTAFLLG 384
Cdd:PRK12662 313 SHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKITLAFVLL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2016345834 385 TLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAWFTAG--LTAFYMFRI 432
Cdd:PRK12662 384 SLSLIGMPPTSGFVAKWYIL-DAFIKSNAWIGLVVLLVGsgLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
68-437 |
2.06e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 104.26 E-value: 2.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 68 FG--YLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 145
Cdd:PRK12663 69 FGiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 146 GFWFTRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflfVTFCAVLLFAGAVaKSA 225
Cdd:PRK12663 149 TLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 226 QFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPHIMNF-ISLIGIITVFLGATLALAQKDIKRGL 302
Cdd:PRK12663 223 LFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 303 AYSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPNKSqnmvlMGGLTKHVPITKT 379
Cdd:PRK12663 301 GYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGA 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2016345834 380 AFLLGTLSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWFTAGLTAFYMFRIYLLTF 437
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
28-461 |
5.30e-21 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 97.00 E-value: 5.30e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 28 VLLLSIVMIFSINLSIQQINSS------------SIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSD 95
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 96 NYMSHDQGYLRFFayMSFFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgL 172
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------L 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 173 LLG-----IL--GFYWITG-SFEFRDLFEIFNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPI 243
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 244 SALIhAATMVAAGIFLVARLLPlfIVIPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 319
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 320 GSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGyspnkSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWS 399
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2016345834 400 KDEILNDSW---LYSPIFaiIAWFTAGLTAFYMFRIYLLTFEGH---LNAHFQNYSGKKNTPLYSISL 461
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-448 |
1.50e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 92.47 E-value: 1.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 7 VGLLLFPTATKNLRRMWAFQSVLLL--SIVMIFSINLSiqqiNSSSIYQHVWSWIINNDFSLEFGylIDPLtSIMSILIT 84
Cdd:PRK07363 16 IGFFPGNLPSARLRQITLVFAVLVLawSLFLLTQFDLS----DPGMQFQEYLPWNEPLGLSYSLG--VDGL-SLPLLVLN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 85 TVGIMVLVYSDNYMSHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPvAANACQKAFVT 164
Cdd:PRK07363 89 SLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFLIY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 165 NRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLfvtfcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPIS 244
Cdd:PRK07363 166 TAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 245 ALIHAATMVAAGIFLVARL-LPLFiviPHIMNFIS----LIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 319
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 320 GSYRS---ALFHLITHAYSKALLFLGSGSIihsmETIVGyspnkSQNMVLMGGLTKHV---PITKTAFLLGTLSLCGIPP 393
Cdd:PRK07363 317 GTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAGMASAGIPG 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2016345834 394 LACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNY 448
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
29-447 |
1.34e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 89.37 E-value: 1.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 29 LLLSIVMIFSINLSIQQINSSSIYqhvwSWIINNDFSLEFGylIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYlrfF 108
Cdd:PRK06473 40 LLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY---Y 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 109 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 188
Cdd:PRK06473 111 SLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 189 RDLFEIFNNLIYNNEVNFLfvtfcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LPL 266
Cdd:PRK06473 190 DYEPLRSHTLPLSTQLLLL------APILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 267 FI-VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLG 342
Cdd:PRK06473 263 FPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 343 SGsiihsmetiVGYSPNKSQNMVLMGGL---TKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAW 419
Cdd:PRK06473 343 VG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCM 413
|
410 420
....*....|....*....|....*...
gi 2016345834 420 FTAGLTAFYMFRIYLLTFEGHLNAHFQN 447
Cdd:PRK06473 414 IGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-400 |
2.07e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 88.87 E-value: 2.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 213 AVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATL 291
Cdd:PRK12665 213 AVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 292 ALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmETIVGyspnkSQNMVLMG 368
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLG 361
|
170 180 190
....*....|....*....|....*....|..
gi 2016345834 369 GLTKHVPITKTAFLLGTLSLCGIPPLACFWSK 400
Cdd:PRK12665 362 GLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
117-432 |
2.70e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 87.01 E-value: 2.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 117 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFN 196
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 197 NLIYNNEVNF--LFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPHI 273
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 274 MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsiihsm 350
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 351 eTIVGYSPNKSQnMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIF-AIIAWFTAGLTAFYM 429
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYY 300
|
...
gi 2016345834 430 FRI 432
Cdd:MTH00196 301 VRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
26-404 |
2.42e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 85.07 E-value: 2.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 26 QSVLLLSIVMIFSINLsIQQINSSSIYQHVWSWIINNDFSLEFGYLIdpltsIMSILITTVGIMVLVYSDNYMSHDQGYL 105
Cdd:MTH00199 24 LSTLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 106 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 185
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 186 FEFRDlfeifNNLIYNNEVNFLFVTFCavLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarll 264
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 265 PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFL 341
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2016345834 342 GSGSIIHSMETIVGYspnksqnMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 404
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
28-437 |
2.53e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 85.19 E-value: 2.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 28 VLLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSL---------EFGYLIDPLTSIMSILITTVG-IMVLVYSDNY 97
Cdd:PRK08676 7 LVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLvlplpgyfmESRYLFIDHLGIFVVLIASVVfILAALYARGY 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 98 MSH-------DQGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTN 165
Cdd:PRK08676 87 VDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIAS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 166 RVGDFGLLlGILGFYWIT------GSFEFRDLfeifnnLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDA-ME 238
Cdd:PRK08676 163 TAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 239 GPTPISALIhAATMVAAGIFLVARLLPLFI---VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMML 315
Cdd:PRK08676 236 APSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 316 ALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMetivgYSPNKSQNmvlMGGLTKHVPITKTAFLLGTLSLCGIP 392
Cdd:PRK08676 315 GIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFRLQPVAAWGVILGSAAIIGMP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2016345834 393 PLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTF 437
Cdd:PRK08676 386 PFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
122-439 |
3.12e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 85.65 E-value: 3.12e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 122 VTSSNLIQIYIFWELVGMCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNN 197
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 198 LIYNNEVNFLFVTFCAVLlfAGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIp 271
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLL--AGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 272 himnFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 337
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 338 LLFLGSGSIIHSmetivgyspNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY- 410
Cdd:PRK08042 323 VLFLGAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 2016345834 411 ----SPIFAIIAWFTAGLTAFYMFRIYLLTFEG 439
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
70-400 |
3.19e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 82.00 E-value: 3.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 70 YLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGMCSyllIGFWF 149
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 150 TRPVAaNACQKAFVTNRVGDFG---LLLGILGFYWITGSFEFRDLfeifNNLIYNNEVNFLFVTFCAVLLFaGAVAKSAQ 226
Cdd:PRK06277 142 ASGTE-EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 227 FPLHVWLPDAMEGPTP-ISALIHAAT-MVAAGIFLVarLLPLFIVIPHIMNF---ISLIGIITVFLGATLALAQKDIKRG 301
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTFSkFVLVALMLV--IFKLFGGLSYFPSAqgvLIALSVLAMVFGVVMALLQTDYKRL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 302 LAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPNKSQNMVLMGGLTKHVPITK 378
Cdd:PRK06277 294 LAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVA 364
|
330 340
....*....|....*....|..
gi 2016345834 379 TAFLLGTLSLCGIPPLACFWSK 400
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
107-436 |
6.69e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 80.85 E-value: 6.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 107 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWITG 184
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 185 SFEFrDLFEI--------FNNLIYnnevnflfvtfcAVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAA 255
Cdd:PRK12561 166 TFTF-DLAELgaksyplaLELLLY------------AGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 256 GIFLV------------------ARLLPLFIVIphimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaL 317
Cdd:PRK12561 225 GVLLKmggyalirfnvqmlpdahVYFAPALAIL----------GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--L 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 318 GMGSYRS-----ALFHLITHAYSKALLFLGSGsiihsmetiVGYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIP 392
Cdd:PRK12561 293 GIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2016345834 393 PLACFWSKDEI---LNDSWLYSPIFAIIAWFTAG----LTAfymfrIYLLT 436
Cdd:PRK12561 364 GMSGFVSELTVflgITSSDVYSSTFRTITILLAAvgliLTP-----IYLLS 409
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
49-400 |
1.33e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 80.10 E-value: 1.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 49 SSIYQHVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMshDQGYLRFFAYMSFFSTSMLG---LVTSS 125
Cdd:PRK02504 53 AALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGAT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 126 NLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrDLFEIFNNLIYNNEvn 205
Cdd:PRK02504 131 ELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPS-- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 206 fLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLL----PLFIVIPHIMnfISLI 280
Cdd:PRK02504 207 -LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLvtafPSFDEQWKLL--FTAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 281 GIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskalLFLGSGS----IIHSMET- 352
Cdd:PRK02504 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvILFSLRTg 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2016345834 353 ---IVGYSpnksqnmvlmgGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK 400
Cdd:PRK02504 357 tdqISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
58-108 |
1.36e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.22 E-value: 1.36e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2016345834 58 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRFF 108
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
126-430 |
1.63e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 67.25 E-value: 1.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 126 NLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVN 205
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 206 FLFVTfcavlLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPHIMNFISLIGII 283
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 284 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsMETIVgYSPNK 360
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 361 SQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMF 430
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
77-394 |
1.45e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 64.43 E-value: 1.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 77 SIMSILITTVGIMVLVYSDNYmSHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWftrpvaAN 156
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 157 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfeifnnliynnevNFLFVTFCAVLLFAGAVAKSAQFPLHV-- 231
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 232 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 309
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 310 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSIihSMETIvGYSPNKSQNMVLMGGltkhvpi 376
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 2016345834 377 tktafLLGTLSLCGIPPL 394
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
206-432 |
2.94e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 63.34 E-value: 2.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 206 FLFVTFCAVLLFAGAvaksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPhimnfislIGIIT 284
Cdd:MTH00198 302 YLFITVAILFKLAAA-------PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVITSKLLLS--------VAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 285 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQNM 364
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 365 VLMGG------------LTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDS----WLYS-PIFAIIAWFT---AGL 424
Cdd:MTH00198 446 GSFGNynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYYLVALFAiicTCI 525
|
....*...
gi 2016345834 425 TAFYMFRI 432
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-392 |
4.05e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.77 E-value: 4.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 57 SWIINNDFSLEFGYLIDPLTSI------MSILITTVGIMVLVYSDNYMshdqgYLRFFAYMSFFSTSMLGLVTSSNLIQI 130
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 131 YIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVT 210
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 211 FcavllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMN-FISLIGIITVFLG 288
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 289 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPNKSQNMV 365
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIK 360
|
330 340
....*....|....*....|....*..
gi 2016345834 366 LMGGLTKHVPITKTAFLLGTLSLCGIP 392
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
131-436 |
6.85e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 62.03 E-value: 6.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 131 YIFWELVGMCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYWITGSFEFRDLfeifnnliYNNEVNF 206
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL--------AAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 207 LFVTFC-AVLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV------------------ARLLPLF 267
Cdd:PRK02546 210 GFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnagmlpdahAQFAPLL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 268 IVIphimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLg 342
Cdd:PRK02546 283 IVL----------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF- 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 343 sgsiihsmetIVGYSPNKSQNMVL--MGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAII 417
Cdd:PRK02546 350 ----------LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVV 419
|
330
....*....|....*....
gi 2016345834 418 AWFTAGLTAFyMFRIYLLT 436
Cdd:PRK02546 420 VVFLAAVGVI-LTPIYLLS 437
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-449 |
1.52e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 60.72 E-value: 1.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFPTATKNLRRMWafQSVLLLSIVMIFSINLSIQQINSSSIyqhvwswiinndFSLEFGYLIDPLTSIMSIL 82
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLW--RSTTFFSFLIALLFLLWFKWSSEVGW------------SFSNLYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 83 ITTVGIMVLVYSDNYMsHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQ 159
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 160 KAFVTNRVGDFGLLLGILGFYWITGSFefrdLFEIFNNLIYNNEVNFLFVTFCavllFAGAVAKSAQFPLHVWLPDA-ME 238
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSL----SLYILYFSKLTTWNNNLWWLAC----ILAFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 239 GPTpisalihAATMVAAGIFLVA---RLLPLFIVIPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 311
Cdd:MTH00206 219 APV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKlssyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 312 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmetiVGYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLS 387
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2016345834 388 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNYS 449
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
118-433 |
9.73e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 58.14 E-value: 9.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 118 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnN 197
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 198 LIYNNEV-NFLFVTFcavllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPHIM 274
Cdd:MTH00217 198 LKIEKELqYFIFLGF-----FLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 275 NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAYSK 336
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 337 allflgsgsiiHSMETIVGYSpnksqnmvlmgGLTKHVPITKTAFLLGTLSLCGIpPLAC-FWSKDEILNDSWLYSPIFA 415
Cdd:MTH00217 351 -----------HHTRLIKYYR-----------GMVITMPLFGILMLLLVLANASI-PLSCnFVGEFLSLLAAFEYSYIVG 407
|
330
....*....|....*...
gi 2016345834 416 IIAWFTAGLTAFYMFRIY 433
Cdd:MTH00217 408 VLASLGMVLSAGYSIYLY 425
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
207-404 |
1.74e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 57.55 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 207 LFVTFCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF--------------IVIP 271
Cdd:PRK12666 208 LLEAGAALLLVVFLI-KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagfgqdWLLP 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 272 himnfislIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL------- 341
Cdd:PRK12666 285 --------GGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlver 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2016345834 342 ----GSGSIIHSMETivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 404
Cdd:PRK12666 357 qrgaAADRLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
205-436 |
1.97e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.43 E-value: 1.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 205 NFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMnfisLIGIIT 284
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 285 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQNM 364
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2016345834 365 VLMGGLtkhvpitktafllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTA--FYMFRIYLLT 436
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF 293
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
110-432 |
2.70e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 56.13 E-value: 2.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 110 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 186
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 187 EFRDLFEIFNnliynnevnflfvtfcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 266
Cdd:MTH00200 85 GISEMLGPLS----------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 267 FIviphiMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsi 346
Cdd:MTH00200 149 LN-----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 347 ihsmetivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIAWFTAGLT 425
Cdd:MTH00200 219 ---------LNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLS 289
|
....*..
gi 2016345834 426 AFYMFRI 432
Cdd:MTH00200 290 LFFYLRL 296
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
228-406 |
2.75e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 56.37 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 228 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPHI-MNFISLIGIITVFLGATLALAQKDIKRGLAYST 306
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 307 MSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMETivgyspNKSQNMVLMGGLTkhvPITKTAFLLGTL 386
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTSWTKS---PTLNTTLMLTLL 249
|
170 180
....*....|....*....|
gi 2016345834 387 SLCGIPPLACFWSKDEILND 406
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
71-444 |
3.11e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 56.46 E-value: 3.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 71 LIDPLTSIMSILITTVGIMVLVYSDNYMS-----HDQGYLrffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 145
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 146 GFWFTRPVAANACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVTFCavlLFAGAVaKS 224
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC---LLAFMV-KM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 225 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF--IVIPHIMNFI--SLIGIItvfLGATLAL 293
Cdd:MTH00068 208 PLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtpLSKELSYPFIilALWGVL---MTSLICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 294 AQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSiihsmetivgYSPNKSQNMVLMGG 369
Cdd:MTH00068 278 RQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRG 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2016345834 370 LTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAH 444
Cdd:MTH00068 348 AQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
29-427 |
4.93e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.90 E-value: 4.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 29 LLLSIVMIFSINLSIQQINSSSIYQHVWSWIINNDFSLEFGYL-IDPLTSIMSILITTVGIMVLVYSDNYMSHDQGYLRF 107
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 108 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFE 187
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 188 FRdLFEIFNNLIYnnevnflFVTFCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------V 260
Cdd:MTH00014 173 ML-MSSMEPPSIY-------LMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 261 ARLLPLFIVIPHIM-NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSK 336
Cdd:MTH00014 238 LRMSSLFMHINKSLsAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 337 ALLFLGSGSIihsmetivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSP 412
Cdd:MTH00014 318 SALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLSTAI 388
|
410
....*....|....*
gi 2016345834 413 IFAIIAWFTAGLTAF 427
Cdd:MTH00014 389 LLAITSFLAAAYSLF 403
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-315 |
1.92e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 54.02 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 70 YLIDPLTSIMSILITTVGIMVLVYSDN--------YMSHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCS 141
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 142 YLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliyNNEVNFLFVTFCAVLLFAGAV 221
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 222 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHI----MNFISLIGIITVFLGATLALAQKD 297
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 2016345834 298 IKRGLAYSTMSQLGYMML 315
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
105-447 |
3.41e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 53.04 E-value: 3.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 105 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITG 184
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 185 SFEFRDLfEIFNNLIYNNEVNFLFVTFC--AVLLfagavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 262
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 263 LLPLFIVIPHIMN--FISLiGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKA 337
Cdd:MTH00127 247 MMVMLDPLTKELSypFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 338 LLFLGSGSiihsmetivGYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 417
Cdd:MTH00127 326 ALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|
gi 2016345834 418 AWFTAGLTAFYMFRIYLLTFEGHLNAHFQN 447
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
205-461 |
6.66e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 51.60 E-value: 6.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 205 NFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPHIMNFISLI--GI 282
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 283 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPNKSQ 362
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 363 NMVLmggltkhvpitktaFLLGTLSLCGIPPLACFWSKDEILND-SWLYSPIFAIIAWFTAGLTAFYMFRIYLLTFeghL 441
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSL---I 287
|
250 260
....*....|....*....|
gi 2016345834 442 NAHFQNYSGKKNTPLYSISL 461
Cdd:MTH00197 288 LSNWMINFLMKINLLYSGLF 307
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
119-344 |
7.89e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 52.25 E-value: 7.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 119 LGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTnRVGDFGLLLGIL--GFYwitGSFEFRDLFEIFN 196
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 197 NLIYNNEVNFLF-VTFcavlLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLL 264
Cdd:CHL00011 202 NQSYPVALEILFyIGF----LIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 265 P--LFIVIPHIMnfisLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKA 337
Cdd:CHL00011 270 PhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGA 343
|
....*..
gi 2016345834 338 LLFLGSG 344
Cdd:CHL00011 344 ALFFLAG 350
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-439 |
1.30e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.91 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 52 YQHVWSWIINNDFslefgYLIDPLTSIMSILITTVGIMVLVYSdnymshdQGYLRFFAYMSFFSTSMLGLV-------TS 124
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 125 SNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfeIFNNLIYNNEV 204
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 205 NFLFVTFCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPhiMNFI 277
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 278 SLIGIITV---FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFLGSGSiihsm 350
Cdd:MTH00150 218 IFLISLSLwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT----- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 351 etivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWFTAGLTAFYMF 430
Cdd:MTH00150 293 -----YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSL 367
|
....*....
gi 2016345834 431 RIYLLTFEG 439
Cdd:MTH00150 368 YLYTSIQHG 376
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
107-463 |
1.66e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 47.62 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 107 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 186
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 187 EFrdlfeifnnLIYNNEVNFLFVTFCAVLlfagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPL 266
Cdd:MTH00041 85 SI---------NGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 267 FIVIPHI----MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 342
Cdd:MTH00041 140 ILLISISnllnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 343 SgsiIHSMETIVGYSPNKSQNmvlmggltkhvPITKTAFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFAII 417
Cdd:MTH00041 220 N---NFSLSTLSHLNKLSQLN-----------PISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILIIG 285
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2016345834 418 AWftagLTAFYMFRI----YLLTFEGHL-------NAHFQNYSGKKNTPLYSISLWG 463
Cdd:MTH00041 286 SL----LSLFFYLRIsfntSLTLFPQHSislfswrNSGNITVYGVILSILSSISILG 338
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
65-334 |
2.18e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.28 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 65 SLEFGYLIDPLTSIMSIL-ITTVGIMVLVYSDNYMSHDQGYLrfFAYMSFFSTSMLGLVTSS-NLIQIYIFWELVGMCSY 142
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLsFWISLLMVLASYKVFKSNKNSKL--FTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 143 LLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnflfvTFCAVLLFAGAVa 222
Cdd:MTH00205 126 ILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 223 KSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPHIMNFISLIGIITVFLGATLALA 294
Cdd:MTH00205 198 KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLR 270
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2016345834 295 QKDIKRGLAYS-------------TMSQLGY-----MMLALGMGSyrSALFHLITHAY 334
Cdd:MTH00205 271 QVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
204-417 |
4.24e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.57 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 204 VNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVIPHIMnfISLIGII 283
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGEEI--LLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 284 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMETIvgysp 358
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2016345834 359 nksqNMVLMGGLTKhVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 417
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
211-405 |
1.13e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 211 FCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipHIMNFISLIGIITVFLGAT 290
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 291 LALAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMETIVGYSPNKSQNMvlMGGL 370
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKI 229
|
170 180 190
....*....|....*....|....*....|....*
gi 2016345834 371 TKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN 405
Cdd:MTH00011 230 SSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
27-449 |
2.94e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.73 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 27 SVLLLSIVMIFSINLSIQqINSSSIYQHVWSWIINNDFSLEFGYL-----IDPLTSIMSILITTVGIMVLVYSDNYMSHD 101
Cdd:MTH00044 10 GIAITSWIVPKNKLWPIS-ISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 102 QGYLR--FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGF 179
Cdd:MTH00044 89 SPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 180 YWITGSfefrdLFEIFNNLIYNNEVNFLFVTFCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 258
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 259 LVARLLPLFIVIphIMNFISLIGIITVFLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLIT 331
Cdd:MTH00044 243 GLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGingALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 332 HAYSKALLFlgsgsiihSMETIVgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYS 411
Cdd:MTH00044 321 HGLVSSALF--------CLANIL-YERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWS 391
|
410 420 430
....*....|....*....|....*....|....*...
gi 2016345834 412 PIFAIIAWFTAGLTAFYMFRIYLLTFEGHLNAHFQNYS 449
Cdd:MTH00044 392 ILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVS 429
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
186-437 |
6.03e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.50 E-value: 6.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 186 FEFRDLFEIFNNLIYNNEVNFLFVT--FCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR 262
Cdd:MTH00094 125 FSFPFLFVYLKNFFFFSLCYFDFFLswEMFFILSLSFMMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLR 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 263 LLPLFIVIphIMNFISLIGIITVFLGATLALAQKDIKRGLAYST---MSQLGYMMLALGMGSYRSALFHLITHAYSKALL 339
Cdd:MTH00094 204 ILGSLNFV--YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLM 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 340 FLGSGSIihsmetivgYSPNKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAw 419
Cdd:MTH00094 282 FYLIGEF---------YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFI- 351
|
250
....*....|....*...
gi 2016345834 420 FTAGLTAFYmFRIYLLTF 437
Cdd:MTH00094 352 FFYFLVSFY-YSLFLIVS 368
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
3-347 |
6.19e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 39.37 E-value: 6.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 3 MLIGVGLLLFPTATKNLRRMWAFQSVLLLSIVMIFSINLSIQqinsssiyqhvwswiiNNDFSLEFGYLIDPLTSIMSIL 82
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLS----------------FYFSNISYFFGLDLLSFGLILL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 83 -ITTVGIMVLVYSDNYMSHDqgYLRFFAYMSFFSTSMLGLV-TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAANACQK 160
Cdd:MTH00163 65 sFWICMLMILSSESVYKKNN--YSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIY 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 161 AFVTNRVGDFGLLLGILGFYWITGSFefrdlfeIFNNLIYNNEVNFLFVTFcavLLFAGAVaKSAQFPLHVWLPDA-MEG 239
Cdd:MTH00163 143 LLFYTLFASLPLLVGIFYLYNNSGSL-------SFFLLNFFGSLNFLWYLS---MILAFLV-KMPMFFVHLWLPKAhVEA 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 240 PTPISaLIHAATMVAAGIFLVARLLPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYS------------- 305
Cdd:MTH00163 212 PVSGS-MILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIwISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglm 290
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2016345834 306 TMSQLGY-----MMLALGMGSyrSALFHLITHAYSKallfLGSGSII 347
Cdd:MTH00163 291 TFSYWGLmgsllMMIGHGLCS--SGLFCLANIIYER----LGSRSLL 331
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
228-431 |
6.87e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.13 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 228 PLHVWLPDAMEGPTPISALIHA-----ATMVaagiflvarllpLFIVIPHIMN--FISLIGIITVFLGATLALAQKDIKR 300
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPMA------------LLIQISHLLNsnLLIIMGLLSTLIGGWGGLNQTQLRK 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2016345834 301 GLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMETivgyspnksqNMVLMGGLTKHVPITKTA 380
Cdd:MTH00070 178 IMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLNST----------NINKLSSSWSKNPTLTSM 243
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2016345834 381 FLLGTLSLCGIPPLACFWSK----DEILNDSwlySPIFAIIAWFTAGLTAFYMFR 431
Cdd:MTH00070 244 MMLTLLSLGGLPPTTGFIPKwlilQELTKQN---LTTLATLMALSALLSLFFYLR 295
|
|
| |
