|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
3.49e-172 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 482.01 E-value: 3.49e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 1 MNPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWA 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 81 TGQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....
gi 20141476 321 TNTSIAILSSLSAILLPISPMILA 344
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILT 344
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.93e-140 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 400.33 E-value: 6.93e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 1 MNPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWA 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 81 TGQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSlNPTVLTSMALA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 20141476 321 TNTS-IAILSSLSAILLPISPMILAAL 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.24e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 386.97 E-value: 1.24e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 1 MNPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWA 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 81 TGQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 20141476 321 TNTSIAILSSLSAILLPISPMILAAL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
3.30e-120 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 350.30 E-value: 3.30e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 1 MNPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWA 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 81 TGQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....
gi 20141476 321 -TNTSIAILSSLSAILLPISPMIL 343
Cdd:MTH00105 321 kPMTLLPTLIILSTMLLPLTPMLS 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
5.59e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 298.81 E-value: 5.59e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 1 MNPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWA 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 81 TGQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....
gi 20141476 321 TNTSIAILSSLSAILLPISPMILA 344
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
16-336 |
1.03e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 267.57 E-value: 1.03e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTHPTAS 95
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 96 MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALASAALGGWMGLNQTQT 175
Cdd:MTH00041 96 IIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 176 RKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLP 255
Cdd:MTH00041 176 RKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 256 PLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANHMKQWYISNPTNTSIAILSSLSAIL 335
Cdd:MTH00041 256 PLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSILSSIS 335
|
.
gi 20141476 336 L 336
Cdd:MTH00041 336 I 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
16-343 |
1.19e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 192.35 E-value: 1.19e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWatgqwdITQLTHPTAS 95
Cdd:MTH00160 17 GTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NLMLFNNISS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 96 MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTspsLNPTVLTSMALASAALGGWMGLNQTQT 175
Cdd:MTH00160 91 MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIILSAIIGAIGGLNQTSL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 176 RKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLP 255
Cdd:MTH00160 168 RKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 256 PLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNsaNHMKQWYISNPTNTSIAILSSLSAIL 335
Cdd:MTH00160 248 PFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNK--NKWNLKKKKNKFSLILNFLSFISLFG 325
|
....*...
gi 20141476 336 LPISPMIL 343
Cdd:MTH00160 326 LILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
16-302 |
3.46e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 172.76 E-value: 3.46e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDItqlthptaS 95
Cdd:MTH00144 16 GTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS--------M 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 96 MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNP-TVLTSMALASAALGGWMGLNQTQ 174
Cdd:MTH00144 88 SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLNQTQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 175 TRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNtTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGL 254
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLSIISLLLSLGGL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 20141476 255 PPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATI 302
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
16-340 |
3.44e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.65 E-value: 3.44e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSmsnawaTGQWDITQLTHPTAS 95
Cdd:MTH00011 18 GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 96 MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVLTSMALASAALGGWMGLNQTQT 175
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 176 RKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLP 255
Cdd:MTH00011 172 RPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLP 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 256 PLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAyYATITLPPNSANhmkqwYISNPTNTSIAILSSLSAIL 335
Cdd:MTH00011 252 PFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSS-----LKSAPYEPKTKILISMCTLS 325
|
....*
gi 20141476 336 LPISP 340
Cdd:MTH00011 326 LGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
16-298 |
9.81e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.20 E-value: 9.81e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATgqwditqLTHPTAS 95
Cdd:MTH00197 10 GVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLSLLSV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 96 MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPslNPTVLTSMALASAALGGWMGLNQTQT 175
Cdd:MTH00197 83 VLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMNQSNI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 176 RKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLP 255
Cdd:MTH00197 161 RQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLP 240
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 20141476 256 PLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 241 PLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
16-346 |
1.46e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 129.08 E-value: 1.46e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLIS-KSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTHPTA 94
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALA 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 95 SM------------LLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILL----MTSPSLNP---TVLT 155
Cdd:COG1007 194 AGganspllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllvEAFPGLAAdwqLLLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 156 SMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTL--LTFYL--YILMTATVF-----LSLNTTKTLK 226
Cdd:COG1007 274 VLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFavillLSRKGGEAEE 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 227 LSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPP 306
Cdd:COG1007 354 IEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPE 433
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 20141476 307 NSANhmkqwyISNPTNTSIAI-LSSLSAILLPISPMILAAL 346
Cdd:COG1007 434 EEAP------ISAPPGLRVALvIAALLVLLLGIFPGPLLDL 468
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
16-346 |
1.91e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 117.61 E-value: 1.91e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLIS-KSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTHPTA 94
Cdd:PRK05777 115 GMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 95 S------------MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILL----MTSPSLNPT---VLT 155
Cdd:PRK05777 195 DgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLSEDwqqVLA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 156 SMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTL--LTFYL--YILMTATVF--LSLNTTKTLKLST 229
Cdd:PRK05777 275 IIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEAES 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 230 LmTSWT----KAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLP 305
Cdd:PRK05777 355 I-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEP 433
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 20141476 306 PNSANHmkqwYISNPTNTSIAILSSLSAILLPISPMILAAL 346
Cdd:PRK05777 434 PRDAPV----NWPLSAGGAVLSVSALLVLVLGIFPQPLLDL 470
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
5.85e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 109.35 E-value: 5.85e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLI-SKSHHPRAVEASVKYFLVQAAASALVLFS-------------SMSNAWAT 81
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 82 GQWDITQLTHPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNptVLTSMALAS 161
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 162 AALGGWMGLNQTQTRKILAFSSIAHLGWMTMII----IYNPKLTLLTFYLYILMTATVF---LSLNTTKTL--KLSTLMt 232
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNLiiEFSGLS- 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 20141476 233 swTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 242 --RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.95e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.95e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 23 SNHWIMAWTGLEINTLAIIPLI-SKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 91 HPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLM-KLPPMAILLMTSPSLNPT-----VLTSMALASAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLvKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 165 GGWMGLNQTQTRKILAFSSIAHLGWMTMII----IYNPKLTLLTFYLYILMTATVFL-----SLNTTKTLKLSTLMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 20141476 236 KAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-336 |
7.51e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 107.34 E-value: 7.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLIS-KSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTH--- 91
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLfls 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 92 ---PTASMLLTA------AIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSL-------NPTVLT 155
Cdd:TIGR01770 194 ngmLNISLLLLGivlilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 156 SMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTL--LTFYL--YILMTATVFLSL------NTTKTL 225
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLsllrsyKDEWIE 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 226 KLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLP 305
Cdd:TIGR01770 354 YISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKP 433
|
330 340 350
....*....|....*....|....*....|.
gi 20141476 306 PnsanhmkQWYISNPTNTSIAILSSLSAILL 336
Cdd:TIGR01770 434 E-------RRIPSNPQSKAQSLLLSISALFI 457
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
3.58e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.48 E-value: 3.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLIS-KSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDI----TQLT 90
Cdd:MTH00199 109 GSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 91 HPTASMLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNptVLTSMALASAALGGWMGL 170
Cdd:MTH00199 189 GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAIGAL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 171 NQTQTRKILAFSSIAHLGWMTMIIIYNP----KLTLLTFYLYILMTATVF---LSLNTTKTLKLSTLMTSwTKAPVLNAA 243
Cdd:MTH00199 267 NQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVIALT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 20141476 244 LMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 346 LALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-300 |
4.02e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 4.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 30 WTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTH----------PTASMLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 100 AAIAIKLGLVPFHFWFPE-----------VLQGTSlttalllstlMKLPPMAILLMTSPSLNP-------TVLTSMALAS 161
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDaypaapspvsaLLSGLL----------TKVGVYAILRVLTLLFGAdpalflgTLLLVLGLLT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 162 AALGGWMGLNQTQTRKILAFSSIAHLGWMTMII-IYNPKLTLLTFYLYI---LMTATVFLS----LNTTKTLKLSTLMTS 233
Cdd:COG0651 283 MLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLAGALFHLLnhaLAKALLFLAagaiERATGTRDLDKLGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 20141476 234 WTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYA 300
Cdd:COG0651 363 GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-302 |
1.12e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.98 E-value: 1.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAV---------EASVKYFLVQAAASALVLFSSMSNAWATGQ--- 83
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 84 -WDITQLTHPTAS----------MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLppMAILLMTSPSLNPT 152
Cdd:MTH00198 280 lGTILSATLETTNielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 153 VLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMII-------IYNPKLTLLTFYLYILMTATVFLSL------ 219
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLeefgtr 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 220 ------------NTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSL 287
Cdd:MTH00198 438 tptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVAL 517
|
330 340
....*....|....*....|..
gi 20141476 288 LGL-------FFYLRLAyyATI 302
Cdd:MTH00198 518 FAIictcisaFYYIRIV--ATI 537
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
3.81e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 73.16 E-value: 3.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 50 PRAVEASVKYFLVQAAASALVLF---------------SSMSNAWATGQWDITQLthptASMLLTAAIAIKLGLVPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSPSLGLAL----ALVFVIAGIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 115 FPEVLQGTSLTTALLLSTLMKLP--PMAILLMTS--PSLNP---TVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHL 187
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKAAgfALAIRLLVTafPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 188 GWMTMIIIYNPK--LTLLTFYL--YILM-----TATVFLSLNTtKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLT 258
Cdd:PRK02504 313 GFVMIGLVAGTEagYASMVFYLlaYLFMnlgafACVILFSLRT-GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 20141476 259 GFMPK 263
Cdd:PRK02504 392 GFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.48e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.19 E-value: 1.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 51 RAVEASVKYFLVQAAASALVL--FSSM--SNAWATGQWDI------TQLTHPTAS----MLLTAAIAIKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 117 EVLQGTSLTTALLLSTLMKLPPMA----ILLMTSPSLNP---TVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASAlatrIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 190 MTMIII----YNPKLTLLTFYL-YILMT----ATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGF 260
Cdd:CHL00049 319 VIIGIIvgdsNDGYASMITYMLfYIFMNlgtfACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 20141476 261 MPK 263
Cdd:CHL00049 399 FGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-311 |
1.84e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.98 E-value: 1.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 33 LEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQL--------THPTASMLLTAAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaenpTVVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 105 KLGLVPFHFWFPE-----------VLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNpTVLTSMALASAALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAVYALIRIYFTVFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 174 QTRKILAFSSIAHLGWMTMIIIYNPKLTLL--TFYL--YILMTATVFLSLN----TTKTLKLSTLMTSWTKAPVLNAALM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 20141476 246 LTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYYATITLPPNSANH 311
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-292 |
1.72e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.02 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 38 LAIIP---LISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQW--DITQLTHPTASM--------LLTAAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLtaqlllflAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 105 KLGLVPFHFWFPEVL-QGTSLTTALLLSTLMKLP-------PMAILLMTSPSLNPTVLTsMALASAALGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHvEAPTAGSVLLAGVLLKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 177 KILAFSSIAHLGWMTM-IIIYNPK-LTLLTFYL--YILMTATVFLSL----NTTKTLKLSTLMTSWTKAPVLNAALMLTL 248
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 20141476 249 LSLAGLPPLTGFMPKWLILQELTKqemttVATIIALLSLLGLFF 292
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
9.66e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.57 E-value: 9.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 50 PRAVEASVKYFLVQAAASALVLFSSMSNAWATG------QWDITQLTHPTASMLLTA---AIAIKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdllELLNLPLPFGVQTWLFLAffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 120 QGTSLTTALLLSTLMKLPPMAILLMTSPsLNP-------TVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTM 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 193 IIIYNPKLTLLTFYLYI----LMTATVFLSLNT----TKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 20141476 265 LILQELTKqemttVATIIALLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
3.23e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 3.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 2 NPHAKLISLISLLLGTTITISSNHWIMAWTGLEINTLA---IIPLISKshhpRAVEASVKYFLVQAAASALVLFSSMSNA 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 79 WATGQWDIT-------QLTHPTASM----LLTAAIAIKLGLVPFHFWFPE-----------VLQGTSL-------TTALL 129
Cdd:PRK08668 172 AKTGTFDFAdisqgliNDTSTGFALivflFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSklgaygfLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 130 LSTLMKLPPMAILLMTSPSLNPTVLTSMALaSAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYI 209
Cdd:PRK08668 252 VLPGTKLFSEFGTYRGVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHV 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 210 ----LMTATVFLSLNT----TKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATI 281
Cdd:PRK08668 331 fnhaLFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFM 410
|
330
....*....|....*..
gi 20141476 282 IALLSLLGLFFYLRLAY 298
Cdd:PRK08668 411 AFFGSIGSFLYVFRPLA 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-284 |
5.35e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.63 E-value: 5.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 80 ATGQWDITQL-THPTASMLLTAAIAI-------KLGLVPFHFWFPEVLQGTSLTTALLLSTLM---------KLPPMail 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 143 LMTSPSLNPTVLTsMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPK------LTLLTfyLYILMTATVF 216
Cdd:PRK12644 260 FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 20141476 217 LSL----NTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIAL 284
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.10e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.49 E-value: 2.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 33 LEINTLAIIPLIS-KSHHPRAVEASVKYFLVQAAASALVLFSSmsnAWATGQWDI-------------TQLTHPTASMLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 99 TAAIAIKLGLVPFHFW----FPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPT----VLTSMALASAALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWlpdaYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 171 NQTQTRKILAFSSIAHLGWM------TMIIIYNPKLT----------LLTFYLYILMTATVFLS----LNTTKTLKLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 20141476 231 MTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
3.57e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.77 E-value: 3.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 48 HHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQL-----THPTASMLLTAAIAI------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 117 EVLQGtslttalllstlmklpP----------------------MAILLMTSPSLNPTVLTsMALASAALGGWMGLNQTQ 174
Cdd:COG1009 236 DAMEG----------------PtpvsallhaatmvkagvyllarLSPLFALSPVWLTVVAI-IGAITALFAALIALAQTD 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 175 TRKILAFSSIAHLGWMTMIIiynpKLTLLTFYLYILMT-----ATVFLS-------LNTTKTLKLSTLmtsWTKAPVLNA 242
Cdd:COG1009 299 IKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLThaffkALLFLGagsvihaTGTRDIRKMGGL---RKKMPITAI 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 20141476 243 ALMLTLLSLAGLPPLTGFMPKWLILQE-LTKQEMTTVATIIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 372 TFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
2.52e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.23 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 109 VPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPTVL--TSMALASAA---LGGWMGLNQTQTRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwqTILPLFGGLtmlTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 184 IAHLGWMTMIIIYNPKLTLLTFYLYI----LMTATVFLSLNT----TKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|....
gi 20141476 256 PLTGFMPKWLILQELTkqEMTTVATIIALLSLLG 289
Cdd:PRK12647 372 PLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.24e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 44.94 E-value: 1.24e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 20141476 291 FFYLRLAYYATITLPPNSANHMKQWYISNPTNT-SIAILSSLSAILLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-288 |
5.89e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.00 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 20 TISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSS----------MSNAWATGQW-DITQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 89 LTHPTASMLLTAAIAI-------KLGLVPFHFWFPE-----------VLQGTSLTTALLLSTLMKlppMAILLMTSPSLN 150
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYY---ILIDAAIGSDFP 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 151 PTVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILM-----TATVFLSLNTTK-- 223
Cdd:PRK06458 281 GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltkSAIFFASGNVLQky 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 20141476 224 -TLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQElTKQEMTTVATIIALLSLL 288
Cdd:PRK06458 361 gTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTA-GLARGPLLIAILLLLLLT 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
7.53e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.64 E-value: 7.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 33 LEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTH--PTASMLLTAAIAIKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 111 FHFWFP------EVLQGTSLTTALLLSTLMKLPPMAILLmtsPSLNPtVLTSMALASAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK07234 203 SGLWLPlthseaEPPVSALLSGVVVKAGVFPLVRCALDV---PGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 185 AHLGWmtmiIIYNPKLTLLTFYLYILMTATVFL------SLNTTKTLKLSTLMTSWTkapvlnaALMLTLLSLAGLPPLT 258
Cdd:PRK07234 279 SQLGF----ILAAPLVGGLYALAHGLVKSTLFLcagalpSRNFTELISQMLGIGKWI-------PLTMASFSIAGFPLLA 347
|
250
....*....|...
gi 20141476 259 GFMPKWLILQELT 271
Cdd:PRK07234 348 GFVSKVLTLKNLL 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-267 |
1.18e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.04 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 152 TVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLNTTK-------- 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSgsisyhfg 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 20141476 224 TLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLIL 267
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-335 |
1.24e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 34 EINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQ-----LTHPTASMLLTAAIAIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 109 V------PFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMT---------SPSLNpTVLTSMALASAALGGWMGLNQT 173
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgglsyFPSAQ-GVLIALSVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 174 QTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLY----ILMTATVFLS----LNTTKTLKLSTLMTSWTKAPVLNAALM 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHainhVIYKSALFLGagivSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 246 LTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSlLGLFFYLRLAYYATITLPPNSANHMKQWYISNPTNTSI 325
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVS-IGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSL 447
|
330
....*....|
gi 20141476 326 AILSSLSAIL 335
Cdd:PRK06277 448 AVLTILCIIL 457
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
1.31e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 46.96 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 29 AWtglEINTLAIIPLISKSHhPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTHPTA---SMLLTAAIAI- 104
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVl 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 105 -------KLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSL--NPT---VLTSMALASAALGGWMGLNQ 172
Cdd:PRK12650 214 iavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 173 TQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSL--------NTTKTLKLSTLMTSWTKAPVLNAAL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLfmligvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 245 MLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTvATIIALLSLLGLFFYLRLAYYATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-292 |
5.11e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 44.81 E-value: 5.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 50 PRAVEASVKYFLVQAAASALVLFSSM----SNAWATGQWDITQLTHPTASM--------LLTAAIAIKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPgvqywlflAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 118 VlqgtslttalllstLMKLPP------MAILLMT----------------SPSLNPTVLTsMALASAALGGWMGLNQTQT 175
Cdd:PRK05846 237 A--------------HVQAPTagsvllAGILLKMgaygllrfslplfpdaSHEFAPIIIT-LGVIAIIYGALVALAQTDI 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 176 RKILAFSSIAHLGWMTM-IIIYNPK-LTLLTFYL--YILMTATVFLSLNT----TKTLKLSTLMTSWTKAPVLNAALMLT 247
Cdd:PRK05846 302 KKLIAYSSISHMGFVTLgIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFF 381
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 20141476 248 LLSLAGLPPLTGFMPKWLILQELTKqemttVATIIALLSLLGLFF 292
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQ-----VNPVIAFIATTGLIL 421
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-299 |
7.98e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.17 E-value: 7.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 92 PTASMLLTAAIAIKLGLVPFhFWFPEVLQGTSLTTALLLSTLMK-------LPPMAILLMTSPSLNPTVLTSMALASAAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 165 GGWMGLNQTQTRKILAFSSIAHLGWMTM-IIIYNPK-LTLLTFYLY---ILMTATVFLS---LNTTKTLKLSTLMTSWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVhdmVVKTALFLIAgslVRLTGYRSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 20141476 237 APVLNAALMLTLLSLAGLPPLTGFMPKWLILQ-ELTKQEMTTVATIIA--LLSLLGLFFYLRLAYY 299
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAYW 431
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-300 |
1.98e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 146 SPSLNPTVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTM-IIIYNPKLTLLTFY-----------LYILMTA 213
Cdd:PRK07691 270 DTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESGMIGAIYylihdmivkaaLFLLIGI 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 214 TVFLSlNTTKTLKLSTLMTSWtkaPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFY 293
Cdd:PRK07691 350 MIKIT-GTTDLKKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
....*..
gi 20141476 294 LRLAYYA 300
Cdd:PRK07691 426 IKIFLKG 432
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
7.26e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.48 E-value: 7.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 105 KLGLvpfHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSP-----SLNPTVLTSMALASAALGGWMGLNQTQTRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 180 AFSSIAHLGWMTMIIIYNPKLTLLTFYL--YILMTATVFLS---------LNTTKTLKLSTLMTSwtkAPVLNAALMLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSagsvihsttVDEQDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|
gi 20141476 249 LSLAGLPPLTGFMPKWLILQ 268
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-298 |
7.53e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.22 E-value: 7.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 111 FHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSP--SLNPTVL---TSMALASAALGGWMGLNQTQTRKILAFSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALiivTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 186 HLGWMTMII-IYNPKLTLLTFYLYILMTATVFLS--------LNTTKTLKLSTLMTSwtkAPVLNAALMLTLLSLAGLPP 256
Cdd:MTH00020 309 QLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSagsvihalSDEQDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPY 385
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 20141476 257 LTGFMPKWLILQELTKQEMTTVATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 386 LTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
1.06e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 38 LAIIPL---ISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATG--QWDITQL---THPTAS-MLLTAAI----AI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 105 KLGLVPFHFWFPEV-LQGTSLTTALLLSTLMKLPP-------MAILLMTSPSLNPTvLTSMALASAALGGWMGLNQTQTR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTygllrfgVGLFPEAWVYLAPW-LATWAVVSVLYGASCAIAQKDMK 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 177 KILAFSSIAHLGWMTMIIIYNPKLTL-----------LTFYLYILMTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALM 245
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSIlaavfqmishgLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMI 376
|
250 260
....*....|....*....|.
gi 20141476 246 LTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-268 |
1.15e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 40.72 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 32 GLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSSMSNAWATGQWDITQL----------THPTASMLLTAA 101
Cdd:PRK12665 139 GFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelpsgTRTALFAVLLVA 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 102 IAIKLGLVPFHFWFPE-----------VLQGTSLttalllstlmKLPPMAI-----LLMTSPSLNpTVLTSMALASAALG 165
Cdd:PRK12665 219 FGIKAAVFPLSFWLPDsyptapapvtaVFAGLLT----------KVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVG 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 166 GWMGLNQTQTRKILAFSSIAHLGWMTM-IIIYNPK-LTLLTFYL--YILMTATVFLSL----NTTKTLKLSTLMTSWTKA 237
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFgIALSTVAgLSGAIYYVahHITVQTTLFLVVglieRQAGSSSLRRLGGLAKAS 367
|
250 260 270
....*....|....*....|....*....|.
gi 20141476 238 PVLNAALMLTLLSLAGLPPLTGFMPKWLILQ 268
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-293 |
1.29e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.51 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 92 PTASMLLTAAIAiKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPT-----VLTSMALASAALGG 166
Cdd:PRK12646 211 PMIFMFLLGAFT-KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 167 WMGLNQTQTRKILAFSSIAHLGW-MTMI-----IIYNPKLTLLTFY-------LYILMTATVFLSL---------NTTKT 224
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAlfmgvgiidHEAGT 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 20141476 225 LKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTK--------QEMTTVATIIALLSLLGLFFY 293
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFTY 446
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-295 |
1.94e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 39.74 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 17 TTITISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAA------SALVLFSSMSNAWATGQWDITQLT 90
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 91 HP----TASMLLTAAIAI------KLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLMTSPSLNPT-------- 152
Cdd:PRK08676 195 AHasllSPSVLGASFLFIfigflaKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeqfsn 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 153 VLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYIL----MTATVFLSLNTTKTLKLS 228
Cdd:PRK08676 275 VLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLahslVKSGLFFSAGILHRQYRS 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 20141476 229 T----LMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLG---LFFYLR 295
Cdd:PRK08676 355 DrfdrIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
2.15e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 39.71 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 55 ASVKYFLVQAAASALVLFSSMSNAWATGQWDITQLTHPTAS-----MLLTAAIAIKLGLVPFHFWFPEVLQGTSLTTALL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 130 LSTLM-KLPPMAILLMTSPSLNP-----TVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMII----IYN-- 197
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIglyvIFGvy 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 198 --PKLTLLT-------------FYLYILMTA-TVFLSLNTTKTLKLSTLMTSwtkAPVLNAALMLTLLSLAGLPPLTGFM 261
Cdd:PRK08667 323 glDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFA 399
|
250 260 270
....*....|....*....|....*....|.
gi 20141476 262 PKWLILQELTKQEMTTVATI-IALLSLLGLF 291
Cdd:PRK08667 400 SELLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.59e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 39.70 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 55 ASVKYFLVQAAASALVL-------FSSMSNAWATGQWDITQLTHPTASMLLTAAI---AIKLGLVPFHFWFPEV-LQGTS 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLaaflgivWLSGSTSFDYDAISTQNLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 124 LTTALLLSTLMKLPPMAIL---LMTSPSLNPTVLTSMAL---ASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLrfgLQLFPQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 198 PKLTLL---------TFYLYIL--MTATVFLSLNTTKTLKLSTLMTSWTKAPVLNAALMLTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK07363 318 TQLSLLgavaqmishGLILALLfhLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 20141476 267 LQ 268
Cdd:PRK07363 398 FQ 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
16-270 |
2.72e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 16 GTTITISSNHWIM---AWTGLEINTLAIIPLISKSHHPRAVEASVKYFlvqaaASALVLFSSMSNAWATGQWDITQLTHP 92
Cdd:PRK06459 84 GMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISGTTNFSYLPSP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 93 TASMLLTAAIAIKLGLVPFHF--WFPEVLQGTSLTTALLLSTLMKLP------PMAILLMTSPSLN-PTVLTSMALASAA 163
Cdd:PRK06459 159 VPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMgvygilKMTILTQTIPIGYfGLTILAIGAFSIL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 164 LGGWMGLNQTQTRKILAFSSIAHLGWM-----TMIIIYNPKLTLLTFYLYILMTAT---------VFLSLNTTKTLKLST 229
Cdd:PRK06459 239 FGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSITY 318
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 20141476 230 LMTSWTKAPVLNAALMLtlLSLAGLPPLTGFMPKWLILQEL 270
Cdd:PRK06459 319 SKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
169-284 |
4.12e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 169 GLNQTQTRKILAFSSIAHLGWMTMI--IIYNPKLTLLTFYL--YILMTATVFLSLNTTKTLK----LSTLMTSWTKAPVL 240
Cdd:PRK06589 298 ALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHLvsHSFAKICLFYSMGSIYSLKkedqVDKLHGTSKSFPLI 377
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIAL 284
Cdd:PRK06589 378 SFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-299 |
4.39e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.61 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 21 ISSNHWIMAWTGLEINTLAIIPLISKSHHPRAVEASVKYFLVQAAASALVLFSS---MSNAWATGQWDI-TQLTHPTASM 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIgflLSITGSLNMTDIaAYLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 97 LLTAAIA-------IKLGLVPFHFWFPEVLQGTSLTTALLLSTLMKLPPMAILLM---------TSPSLNPTVLTSMALA 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyiiigyeTIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 161 SAALGGWMGLNQTQTRKILAFSSIAHLGWMTMIIIYNPKLTLLTFYLYILMTATVFLSLnttktlkLSTLMTSWTKAPvL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFL-------IDAYNESYKREP-N 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 20141476 241 NAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLSLLGLFFYLRLAYY 299
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLL 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
5.09e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 5.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 107 GLVPFHFWFPEV-LQGTSLTTALLLSTLMKLPPMAILLMTSPSLNP-----TVLTSMALASAALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 181 FSSIAHLG--------WMTMIIIYNPKLTLLTFY--LYILMTATVFLSL---------NTTKTLKLSTLMTSWTKAPVLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 20141476 242 AALMLTLLSLAGLPPLTGFMPKWLILQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
148-303 |
6.58e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.45 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 148 SLNPTVLTSMALASAALGGWMGLNQTQTRKILAFSSIAHLGWMTMII-IYNPKLTLLTFYLYILMTATVFLS-------L 219
Cdd:MTH00210 272 PLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSagsvihaV 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20141476 220 NTTKTL-KLSTLMTSwtkAPVLNAALMLTLLSLAGLPPLTGFMPKWLILQELTKQEMTTVATIIALLS-LLGLFFYLRLA 297
Cdd:MTH00210 352 SDEQDMrKMGGLIKS---IPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLI 428
|
....*.
gi 20141476 298 YYATIT 303
Cdd:MTH00210 429 YLTFIT 434
|
|
| |
