|
Name |
Accession |
Description |
Interval |
E-value |
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-500 |
0e+00 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 751.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKdIPANRIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDG 80
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGN-LPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAG 160
Cdd:PRK07363 80 LSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYAS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 161 MKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPI 240
Cdd:PRK07363 160 IKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 241 AILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATP 320
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 321 LALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQ 400
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 401 GSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTTT 480
Cdd:PRK07363 400 GSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQPNWLVRWSEPTTT 479
|
490 500
....*....|....*....|
gi 2004377957 481 AMVTAIPTIEKNLIAEIVLK 500
Cdd:PRK07363 480 AMVAAIPPTEQTVISQVALK 499
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-491 |
0e+00 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 587.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKdIPANRIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDG 80
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSG-INGKLARSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAG 160
Cdd:PRK06473 80 LSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 161 MKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPI 240
Cdd:PRK06473 160 TKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 241 AILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATP 320
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 321 LALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQ 400
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 401 GSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTTT 480
Cdd:PRK06473 400 GSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLVRWTEPTAT 479
|
490
....*....|.
gi 2004377957 481 AMVTAIPTIEK 491
Cdd:PRK06473 480 ALLTGQSTVAA 490
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-486 |
7.51e-178 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 508.47 E-value: 7.51e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDipANRIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDG 80
Cdd:COG1008 5 LLSLLILLPLLGALLLLLLPRRN--ARLARWVALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKD-TERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYA 159
Cdd:COG1008 83 ISLPLVLLTALLTPLAILASWNEiKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIYA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 160 GMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAP 239
Cdd:COG1008 163 AIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 240 IAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAAT 319
Cdd:COG1008 243 GSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALN 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 320 PLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEFISF 399
Cdd:COG1008 323 PLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLA---KRMPVLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 400 QGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTT 479
Cdd:COG1008 400 LGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDLIEPSV 479
|
....*..
gi 2004377957 480 TAMVTAI 486
Cdd:COG1008 480 EALLARV 486
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
2-486 |
8.88e-155 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 449.39 E-value: 8.88e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 2 LSVLIWLPIIAAIIIGFYPAKDipANRIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDGL 81
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNK--DGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 82 SILMLVLNSFLTWIAIYSSSKDTE-RPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAG 160
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILASWESIQkRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 161 MKFLIYTAISGALILATFLGMVWLGGsHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPI 240
Cdd:TIGR01972 159 MKFFLYTLAGSLLMLLAILGLYFLGG-GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 241 AILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATP 320
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 321 LALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSpirGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQ 400
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLAN---KMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 401 GSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNN-LAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTT 479
Cdd:TIGR01972 395 GSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPeVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTEPSV 474
|
....*..
gi 2004377957 480 TAMVTAI 486
Cdd:TIGR01972 475 NNLLSQV 481
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-487 |
8.80e-126 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 376.08 E-value: 8.80e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDIPAnrIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDG 80
Cdd:PRK05846 5 LLSLLIFLPLIGGLLVLLTERFGARL--ARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKD-TERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYA 159
Cdd:PRK05846 83 ISLLLVVLTALLTPLAVLASWEEiKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 160 GMKFLIYTAISGALILATFLGMVWLG--GSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEAS 237
Cdd:PRK05846 163 ATKFFLYTLLGSLLMLVAIIYLVVVYynATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 238 APIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAA 317
Cdd:PRK05846 243 TAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 318 ATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPGLTGFIAEFI 397
Cdd:PRK05846 323 GNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGL---AKVMPVLAAFFLFFAMASLGLPGTSGFVGEFL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 398 SFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSET 477
Cdd:PRK05846 400 ILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLLDVIHP 479
|
490
....*....|
gi 2004377957 478 TTTAMVTAIP 487
Cdd:PRK05846 480 SVENLLQWVA 489
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
50-484 |
2.60e-98 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 305.42 E-value: 2.60e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 50 KFDINNPGMQFTEYLPWNETLGLSYHLGVDGLSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQN 129
Cdd:PRK12561 29 HYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPRLFYFLMLVLYSAQIGVFLAQD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 130 LLLFFLFYELELIPFYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILL 209
Cdd:PRK12561 109 LLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALELLLY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 210 AGIVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVV 289
Cdd:PRK12561 189 AGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 290 AITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGL 369
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLA---KVM 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 370 PLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAV-------YFVILLNRTCFGKLQNNL-- 440
Cdd:PRK12561 346 PKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVgliltpiYLLSMLRRVFYGPRSELLpa 425
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2004377957 441 -AYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTTTAMVT 484
Cdd:PRK12561 426 lAVVEDAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKTVALAA 470
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-491 |
1.29e-91 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 288.91 E-value: 1.29e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 2 LSVLIWLPIIAAIIIGFYPAKDiPANRIRLASLTVTGLVLLWNMFILLK-FDINNPGMQFTEYLPWNETLGLSYHLGVDG 80
Cdd:PRK02546 9 LTTIILFPIVAALLIPFIPDKG-DGKTVRWYALIVGLIDFLITVYAFYTgYDFSNPGLQLVESYSWLPQLGLTWSVGADG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAG 160
Cdd:PRK02546 88 LSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 161 MKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPI 240
Cdd:PRK02546 168 TKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPV 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 241 AILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATP 320
Cdd:PRK02546 248 HMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTD 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 321 LALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQ 400
Cdd:PRK02546 328 LGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVG---QKMRKMFAMWTACSLASLALPGMSGFVAELMVFV 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 401 GSFSSFPISTILCVVASGLTAV-------YFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFL---IIFLGVQPTW 470
Cdd:PRK02546 405 GFATSDAYTLPFRVVVVFLAAVgviltpiYLLSMLREIFFGPENKELVSHEKLVDAEPREVFIIACLlvpIIGIGLYPKL 484
|
490 500
....*....|....*....|....*
gi 2004377957 471 LVRWSETTTTAMVT----AIPTIEK 491
Cdd:PRK02546 485 VTQSYDATTNQLVArdrdSVPSLAQ 509
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
2-443 |
8.30e-72 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 236.38 E-value: 8.30e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 2 LSVLIWLPIIAAIIIGFYPAKdipANR-IRLASLTVTGLVLLWNMFIL-LKFDINNPGMQFTEYLPWNETLGLSYHLGVD 79
Cdd:CHL00011 7 LTIIVVLPIFAGSLIFFLPHR---GNKvIRWYTLCICLLELLLTTYAFcYHFQLDDPLIQLKEDYKWINFFDFHWRLGID 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 80 GLSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYA 159
Cdd:CHL00011 84 GLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 160 GMKFLIYTAISGALILATFLGMVwLGGSHSFAFDTVATANIS--AGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEAS 237
Cdd:CHL00011 164 ATKFILYTAGGSIFLLIGVLGMG-LYGSNEPTLNFETLANQSypVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAH 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 238 APIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAA 317
Cdd:CHL00011 243 YSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 318 ATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIrglPLVSALLVLGGMASSGIPGLTGFIAEFI 397
Cdd:CHL00011 323 ITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPM---PKIFTMFSSFSMASLALPGMSGFVAELI 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2004377957 398 SFQG-----SFSSFPISTILCVVASG--LTAVYFVILLNRTCFG-KLQNNLAYY 443
Cdd:CHL00011 400 VFFGiitsqKYLLMPKILITFVMAIGmiLTPIYLLSMLRQMFYGyKLFNVPNSY 453
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-431 |
2.09e-66 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 220.40 E-value: 2.09e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFypakdIPANRIRLASLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYHlgVDG 80
Cdd:COG0651 4 LLILPVLLPLLAAALLLL-----LGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLV--ADR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIA-IYSSS--KDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRA 157
Cdd:COG0651 77 LSALFLLLTALVALAVlLYSIGymRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 158 YAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEAS 237
Cdd:COG0651 157 RAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 238 APIAILLGGILAKLGTYGLLRFGLGMFP-QTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAA 316
Cdd:COG0651 237 SPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 317 AATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPGLTGFIAEF 396
Cdd:COG0651 317 LGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
410 420 430
....*....|....*....|....*....|....*.
gi 2004377957 397 ISFQGSFSS-FPISTILCVVASGLTAVYFVILLNRT 431
Cdd:COG0651 394 LLLQAALEAgAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-472 |
3.42e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 178.71 E-value: 3.42e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDIpaNRIRLASL-----TVTGLVLLWNMFillkfdinNPGMQFT-----EYLPWNETL 70
Cdd:MTH00217 1 MLELVFILPLIGILHLLIIPRDNI--VRLKKIALewsllTLTATILLWASF--------DGEGQFQaikkfEWIPGIEPV 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 71 GLSYHLGVDGLSILMLVLNSFLTWIAIYSSSKDTE-RPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLIS 149
Cdd:MTH00217 71 FGPVVFAVDGISIFFLILTALLTPICILISWNSIKfLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 150 IWGGKN-RAYAGMKFLIYTAI-SGALILATFLGMVWLGGSHsfaFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHT 227
Cdd:MTH00217 151 IWGSREeKVQASYYFFFYTFIgSVFMLLGIFTLYSYAGTTD---YQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGH 307
Cdd:MTH00217 228 WLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 308 MGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirgLPLVSALLVLGGMASSGIP 387
Cdd:MTH00217 308 MGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVIT---MPLFGILMLLLVLANASIP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 388 GLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLaYYPKVLWNEKFPALI-LAFLIIFLGV 466
Cdd:MTH00217 385 LSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYL-YFSRDLNRREFYVLLpLVFLIYLMGI 463
|
....*.
gi 2004377957 467 QPTWLV 472
Cdd:MTH00217 464 FPFIII 469
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
142-415 |
2.17e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 160.56 E-value: 2.17e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 142 IPFYLLISIWGGK-NRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSF-AFDTVATANISAGMQLILLAGIVLGFGIK 219
Cdd:pfam00361 16 LPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdELSKALTGGLNSSGLLLLFLLILVGFLFK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 220 IPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWhIIAPTLAIWGAISAIYGAVVAITQKDIKRM 299
Cdd:pfam00361 96 SAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSP-FIQQILLILAIISMLLGSLAALVQTDIKRL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 300 VAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLNGLMSPIrglPLVSALLVL 378
Cdd:pfam00361 175 LAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYGGLAKTM---PILALVFLV 251
|
250 260 270
....*....|....*....|....*....|....*..
gi 2004377957 379 GGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVV 415
Cdd:pfam00361 252 AMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-472 |
2.59e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.54 E-value: 2.59e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDipANRIRLASLTvTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSYH----- 75
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPREN--SVKLKKRALE-WSLAILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQwgplv 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 76 LGVDGLSILMLVLNSFLTWIAIYSSSKDTER-PRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGG- 153
Cdd:MTH00204 79 FAVDGVSLFFILLTTLLIPICILISWKSIKFlFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSr 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 154 KNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFafDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAY 233
Cdd:MTH00204 159 EEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDY--QILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 234 VEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILL 313
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 314 AAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPGLTGFI 393
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGL---TLTMPLFVIIMLVLSLANMGFPLSCNFV 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 394 AEFISFQGSFsSFPISTILCVVASGL-TAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLV 472
Cdd:MTH00204 394 GEFFSLLAAF-EYSLGLGVLVTSGMVwSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFIII 472
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-477 |
1.10e-42 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 158.12 E-value: 1.10e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDipanRIRLASLTVTGLVLLWNMFILLKFDINN--PGMQFTEYLPwnetlGLSYHLGV 78
Cdd:PRK08375 5 LLPLLVAVPLLAAALIVLLPKRR----RLRWALALLVAALTFALAISLLPQVLDGgvIAYVVGGWPP-----GIGIELRA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 79 DGLSILMLVLNSFLTWIA-IYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRA 157
Cdd:PRK08375 76 DSLSALFLLVTSILAIAAlLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRAL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 158 YAGMKFLIYTAIsGALILATFLGMVW-LGGSHSFAfdtvATANISAGMQLILLAG--IVLGFGIKIPLIPFHTWLPDAYV 234
Cdd:PRK08375 156 AAARKYLIVGLI-GSTFLLIGVGLLYgVTGTLNMA----DLAGALAENPTVVTAFgfVLLALALKAAVFPLHTWLPRAYP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 235 EASAPIAILLGGILAKLGTYGLLRFGLGMFP------QTWHIIAPTLAIwgaISAIYGAVVAITQKDIKRMVAYSSIGHM 308
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfrfaLGLGWLLAVLAL---LSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 309 GYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPG 388
Cdd:PRK08375 308 GYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG---RRMPLTAAAFAVASLSLIGVPP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 389 LTGFIAEFISFQGSFSSFPISTILCVVASGL-TAVYFVILLNRTCFGK-LQNNLAYYPKVLWNEKFPALILAFLIIFLGV 466
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPpPPGSEAPKQEAPLGMLAPSLALALLSLLLGI 464
|
490
....*....|.
gi 2004377957 467 QPTWLVRWSET 477
Cdd:PRK08375 465 YAGPLLQLADA 475
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
69-472 |
1.63e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 155.46 E-value: 1.63e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 69 TLGLSYHLGVDGLSILMLVLNSFLTWIAIYSSSKDTER-PRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLL 147
Cdd:MTH00226 91 IMGGPLVFAVDGISIYFIILTGFIVPCSILISWHSVKYlTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 148 ISIWGGKN-RAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFH 226
Cdd:MTH00226 171 LGIWGSREeKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 227 TWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIG 306
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 307 HMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSpirGLPLVSALLVLGGMASSGI 386
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSI---TMPIWGTIMIVTSLANVAV 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 387 PGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGV 466
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGI 487
|
....*.
gi 2004377957 467 QPTWLV 472
Cdd:MTH00226 488 YPIFIL 493
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-466 |
2.00e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 155.51 E-value: 2.00e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 8 LPIIAAIIIGFYPAKDI--PANR--IRLASLTVTGLVLLWNMFILLKFDINNpGMQFTEYLPWNETLGLSYHlgVDGLSI 83
Cdd:PRK12667 9 TPILLVLFAFLLPLLSIllKGNRkiQKIYALLVSLITLILSILLFIQVYSSN-KPIVYLFGGWPAPIGIVYE--VDLLGA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 84 LMLVLNSFL-TWIAIYSSS--KDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRA-YA 159
Cdd:PRK12667 86 LLGLLTALVmFLILIYSYWylEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAvEA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 160 GMKFLIYTAISGALIlatFLGMVWLGGshsfAFDTVATANISAGMQ-------------LILLAGIVLG-----FGIKIP 221
Cdd:PRK12667 166 AIKYALIGAVGTTLY---FLALAFLYA----TFGTLNMADLSAKIRglsfpltgglagnPPLALGVALAlalwaFTIKAA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 222 LIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRF------GLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKD 295
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 296 IKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSAL 375
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGL---GRKMPIASFA 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 376 LVLGGMASSGIPGLTGFIAEFISFQGSF-SSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPA 454
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLeSGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPSMSVVI 475
|
490
....*....|..
gi 2004377957 455 LILAFLIIFLGV 466
Cdd:PRK12667 476 LVLALAVLILGI 487
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
72-435 |
2.82e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 144.60 E-value: 2.82e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 72 LSYHLGVDGLSILMLVLN---SFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLI 148
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSlwiSGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 149 SIWGGK-NRAYAGMKFLIYTaISGAL-ILATFLGMVWLGGSHSFAFdtVATANISAGMQLILLAGIVLGFGIKIPLIPFH 226
Cdd:MTH00150 96 LGWGYQpERLQAGMYMMLYT-VGASLpLLLVILWMSSSYGSSFMLL--ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFH 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 227 TWLPDAYVEAsaPIA--ILLGGILAKLGTYGLLRFG--LGMFPQTWHIIAPTLAIWGAIsaiYGAVVAITQKDIKRMVAY 302
Cdd:MTH00150 173 LWLPKAHVEA--PVAgsMILAGILLKLGGYGILRMMmvFSLSSSSFSIFLISLSLWGGV---LTSLICLRQSDVKSLIAY 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 303 SSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMA 382
Cdd:MTH00150 248 SSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGM---LMLYPSLSLWWFLFCII 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2004377957 383 SSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGK 435
Cdd:MTH00150 325 NMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGG 377
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-474 |
1.00e-36 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 143.37 E-value: 1.00e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPaKDIPANRIRLASLTVTGLVLLWnmFILLKFDINNPGMQFTEYlPWNETLGLSYHLG--V 78
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLG-RRLGRRAAGWLAALAPLAAFVL--SLLLFPAVLGGEVVVELY-TWIPVGSLGLDFGfrL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 79 DGLSILMLVLNSFL-TWIAIYSSS--KDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKN 155
Cdd:COG1009 79 DGLSLLMLLLVTGVgLLVHIYSIGymSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 156 RA-YAGMKFLIYTAISGALILATFLGMVWLGGSHSFAfDTVATANISAGMQLILLAGIVLGFGI--KIPLIPFHTWLPDA 232
Cdd:COG1009 159 SArRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFS-ELLAAAPTILSSPLLTLILLLLLLGAfgKSAQFPLHFWLPDA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 233 yVEASAPI-AILLGGILAKLGTYGLLRFG--LGMFPqTWHIIaptLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMG 309
Cdd:COG1009 238 -MEGPTPVsALLHAATMVKAGVYLLARLSplFALSP-VWLTV---VAIIGAITALFAALIALAQTDIKRVLAYSTVSQLG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 310 YIllaAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGL 389
Cdd:COG1009 313 YM---FLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLR---KKMPITAITFLIGALSLAGIPPF 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 390 TGFIA-EFIsFQGSFSSFPISTIL---CVVASGLTAVYFVILLNRTCFGKLQNNLAYYPK-VLWNEKFPALILAFLIIFL 464
Cdd:COG1009 387 AGFFSkEAI-LEAALEAGGLGPLLlavALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHeSPWLMTLPLVVLAVLSLVL 465
|
490
....*....|.
gi 2004377957 465 GVQ-PTWLVRW 474
Cdd:COG1009 466 GLLlPGLLEGL 476
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
78-477 |
2.31e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 137.56 E-value: 2.31e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILMLVLNSFLTWIAIYSSSKDTERPRL----FYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGG 153
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 154 KNRAY-AGMKFLIYTAISGALILatfLGMVWL-GGSHSFAFDTVATA-NISAGMQLILLAGIVL---GFGIKIPLIPFHT 227
Cdd:COG1007 148 DRRSSeAALKYFLLGALSSGFLL---YGISLLyGATGSLNLAGIAAAlAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAYVEASAPIAILLGGIlAKLGTYG-LLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIG 306
Cdd:COG1007 225 WTPDVYEGAPTPVTAFLATA-PKIAAFAaLLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 307 HMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETK-VGTRELDKLNGLmspIRGLPLVSALLVLGGMASSG 385
Cdd:COG1007 304 HAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKgGEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 386 IPGLTGFIAEFISFQGSFSS-FPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAyyPKVLWNEKFPALILAFLIIFL 464
Cdd:COG1007 381 IPPTAGFFGKFYVFSAAVEAgLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAP--ISAPPGLRVALVIAALLVLLL 458
|
410
....*....|...
gi 2004377957 465 GVQPTWLVRWSET 477
Cdd:COG1007 459 GIFPGPLLDLAAA 471
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-472 |
8.70e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 127.38 E-value: 8.70e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 4 VLIWLPIIAAIIIGFYPAKDipanriRLASLTVTGLVLLwnmFILLKFDINNPG-MQFTEylpwnetlGLSYHLGVDGLS 82
Cdd:PRK07234 7 VWIALPFLLGFAIYLLPKLD------RNLALGMAIVSAV---YALGLVASMVPLeLTLLD--------NFGVTLRADALS 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 83 ILMLVLNSFLtWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISiWGGKNRAY-AGM 161
Cdd:PRK07234 70 GYFILTNALV-TLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIwVGL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 162 KFLIYTAISGaliLATFLGMVWL-GGSHSFAFDTVATANISAgmqlilLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPI 240
Cdd:PRK07234 148 RYLFYSNVAM---LFYLIGAVLVyQANGTFAFSGLATADPEA------FALIALGLLVKGGIFVSGLWLPLTHSEAEPPV 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 241 AILLGGILAKLGTYGLLRFGLgMFPQTWhiiaPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYIllaaaaaTP 320
Cdd:PRK07234 219 SALLSGVVVKAGVFPLVRCAL-DVPGLD----LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI-------LA 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 321 LALVGAVAQMfSHGIILAILFHLVGVIEtkvgTRELDKLNGLMSPIRglplVSALLVLGGMASSGIPGLTGFIAEFISFQ 400
Cdd:PRK07234 287 APLVGGLYAL-AHGLVKSTLFLCAGALP----SRNFTELISQMLGIG----KWIPLTMASFSIAGFPLLAGFVSKVLTLK 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 401 GsfsSFPISTILCVVASGLTAVYF--VILLNRTC-FGKLQNNLAYYPKV--------LWNEKFPA------LILAFLIIF 463
Cdd:PRK07234 358 N---LLPWQAIALNLAAVGTAASFwkFIFLPFSAdDEDKKPLPGFWNAIalllgglfLANGVYTEaytlgnILKALLTIG 434
|
....*....
gi 2004377957 464 LGVQPTWLV 472
Cdd:PRK07234 435 LGWLPYFLV 443
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
212-474 |
2.32e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 126.58 E-value: 2.32e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 212 IVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIW-GAISAIYGAVVA 290
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 291 ITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLP 370
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL---LKVSP 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 371 LVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPI-STILCVVASGLTAVYFVILLNRTCFGKLQNNLAyYPKVLWN 449
Cdd:PRK06458 377 LTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLlIAILLLLLLTLAFAALVRRVAGMVFGEPPEAVN-RGDLGWL 455
|
250 260
....*....|....*....|....*.
gi 2004377957 450 EKFPALILAFLIIFLGVQ-PTWLVRW 474
Cdd:PRK06458 456 TTSPMFVHLVLVLVLGLYiPQPLVRW 481
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
66-432 |
1.37e-30 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 125.61 E-value: 1.37e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 66 WNETLGLSYHLGVDGLSILMLVLNSFLTW-IAIYSSS-----KDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYEL 139
Cdd:PRK08667 63 WGIAPGLDITFHIDRLAAFFIILIGLVSLcVAIYSLGynehmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 140 ELI-PFYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVataniSAGMQLILLAGIVLGFGI 218
Cdd:PRK08667 143 MALsSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGA-----SAGILSLVFLLLFLGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 219 KIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMF-PQTWHIIAPTLAiwGAISAIYGAVVAITQKDIK 297
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLsPELWWGVLILLA--GSISALLGVIYALKEHDLK 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 298 RMVAYSSIGHMGYILL-----------AAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspI 366
Cdd:PRK08667 296 GLLAYSSIENIGIILMgiglyvifgvyGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGL---V 372
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2004377957 367 RGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSF----PISTILCVVA-------SGLTAVYFVILLNRTC 432
Cdd:PRK08667 373 KLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFsvadPLIKILLFSVlaifaltSALAAACFVKAFGITF 449
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-401 |
1.42e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 124.70 E-value: 1.42e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 2 LSVLIWLPII-------AAIIIGFYPAKDipanriRLASLTVTGLVLLWNMFILlkFDINNPGMQFTEYLPWNETLGLSy 74
Cdd:PRK12665 1 MPVLAPLPVLlpllaaaLTLVLGRRPRAQ------RAISLLALSAVLVLSAVLL--YLVDRDGTQAVQLGGWDAPIGIT- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 75 hLGVDGLSILMLVLNSFLTW-IAIYSSSK-----DTERP-RLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLL 147
Cdd:PRK12665 72 -LVVDRLSALMLVVSSVVLLaVLVYAIGQgirdgDEEQPvSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 148 ISIWGGKNRAYAGMKFLIYTAISGALILaTFLGMVWLG-GSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFH 226
Cdd:PRK12665 151 LTLGATAARVRAGVTYVMVSMVSSLLFL-IGIALVYAAtGTLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 227 TWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQtwHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIG 306
Cdd:PRK12665 230 FWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG--GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 307 HMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGI 386
Cdd:PRK12665 308 HIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGL---AKASPLLAVLFFVPALNLGGI 384
|
410
....*....|....*
gi 2004377957 387 PGLTGFIAEFISFQG 401
Cdd:PRK12665 385 PPFSGFIGKVALLEA 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-472 |
1.48e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 124.44 E-value: 1.48e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILMLVLNSFLTWIA-IYSSSKDTERPRL--FYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGK 154
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAvLYSISYMKHDTGLdkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 155 NRAY-AGMKFLIYTAISGALILatfLGMVWLGGShsfaFDTVATANISAGMQL-------ILLAGIVLGFGIKIPLIPFH 226
Cdd:PRK08376 168 WEAIeAGIKYMFVGSLASSMVL---LGIALLYGQ----YGTLNMAYLAVKMSEnptvvakIALALFIAGLAMKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 227 TWLPDAYVEASAPIAILLggILAKLGT-YGLLRFGLGMFPQT-------WHIIaptlaIWGAISAIYGAVVAITQKDIKR 298
Cdd:PRK08376 241 MWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlatvgWVII-----ILGCLTMFVGVAMAVVQKDVKR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 299 MVAYSSIGHMGYI------------LLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspi 366
Cdd:PRK08376 314 LLAYHSVSQIGYMllglgvglaalgDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLA--- 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 367 RGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKV 446
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEP 470
|
410 420
....*....|....*....|....*.
gi 2004377957 447 LWNEKFPALILAFLIIFLGVQPTWLV 472
Cdd:PRK08376 471 PKPMLVPMLILAIAIIGMGLFPWQIS 496
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
8-464 |
5.64e-30 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 122.39 E-value: 5.64e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 8 LPIIAAIIIGFYPAKDIPANRIRLASL-TVTGLVLLWNMFILlkfdinnpGMQFTEYLPWNETLGLSYHLGVDGLSILML 86
Cdd:PRK06525 10 LPFIGALVVFFLPGRRAAELGVLFAALtTLCMLSLAYAFYQA--------GKVAVTLTLVNLGDVALFGLVIDPVSVLIG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 87 VLNSFLTWIAI-----YSSSKDTERP-----RLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNR 156
Cdd:PRK06525 82 FVVVLLGLLVTlystgYMSPGNREHPvhegtGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 157 AYAGMKFLIYTAIsGALILATFLGMVWLGGsHSFAFDtvATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAyVEA 236
Cdd:PRK06525 162 LRSALKALLITHI-GSLGLYLAAATLFLQT-GTFALS--ALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 237 SAPI-AILLGGILAKLGTYGLLRFGLGMFPQTwHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAA 315
Cdd:PRK06525 237 PTPAsAYLHAASMVKVGVYIFARAIQSMGPIP-HVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 316 AAATPLALV---GAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGF 392
Cdd:PRK06525 316 SLAILGSRLaleGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCVAALAITGVPPFNGF 392
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2004377957 393 IAEFISFQGSF---SSFPISTILCVVASGLTAVYFVILL---NRTCFGKLQnnlayyPKVLWNEKFPALILAFLIIFL 464
Cdd:PRK06525 393 FSKFPIFAAGFelsVEYWILLPAMVLLLIESVASFAWFLrwfGRVVFGEPS------EAVADAAPLPGSMKLVLIVLI 464
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
78-474 |
6.82e-30 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 121.85 E-value: 6.82e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILM---LVLNSFLTWIAIYSSSKDTERPRlFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGK 154
Cdd:PRK05777 71 VDGFALFLkglILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDR 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 155 NRAY-AGMKFLIYTAISGALILatfLGMVWL-GGSHSFAFDTVATA-NISAGMQLILLAGIVL---GFGIKIPLIPFHTW 228
Cdd:PRK05777 150 RRSLeAAIKYFVLGALASGFLL---YGMSLLyGATGSLSFAGIAKAlADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 229 LPDAYVEASAPIAILLGGIlAKLGTYG-LLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGH 307
Cdd:PRK05777 227 TPDVYEGAPTPVTAFLATA-PKIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 308 MGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRE-LDKLNGLmspIRGLPLVSALLVLGGMASSGI 386
Cdd:PRK05777 306 AGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAEsISDFAGL---SKRSPLLAAVMTIFMLSLAGI 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 387 PGLTGFIAEFISFQGSFSSFPIS-TILCVVASGLTAVYFVILLnRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLG 465
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVEAGLWWlAVIGVLNSAIGAFYYLRVI-KLMYFDEPPRDAPVNWPLSAGGAVLSVSALLVLVLG 461
|
....*....
gi 2004377957 466 VQPTWLVRW 474
Cdd:PRK05777 462 IFPQPLLDL 470
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
41-471 |
2.51e-29 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 120.04 E-value: 2.51e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 41 LLWNMFILLKFDINNPgmqFTEYLPWNETLGLSYH---LGVDGLSILMLVLnSFLTWIAIYSSSKDTE------RPRLFY 111
Cdd:MTH00206 20 WLWRSTTFFSFLIALL---FLLWFKWSSEVGWSFSnlyLSYDPLSSPLVIL-SCWLLPLMFLASQNHMknepinRQRIYI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 112 SLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWG-GKNRAYAGMKFLIYTAISGALILATFLGMvwLGGSHSF 190
Cdd:MTH00206 96 TLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGnQKERLNAGYYFLFYTLIGSLPLLIALLFL--QNSLGSL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 191 AFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEAsaPIA--ILLGGILAKLGTYGLLRFGLGMFPQTW 268
Cdd:MTH00206 174 SLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEA--PVAgsMVLAGVLLKLGGYGMMRIILILGPSTK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 269 HIIAP--TLAIWGAISAiygAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGV 346
Cdd:MTH00206 252 LSSYFfiILGLWGSIMT---SSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 347 IETKVGTRELDKLNGLMSpirGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVI 426
Cdd:MTH00206 329 LYERSHTRTILGNRGLQM---ILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2004377957 427 LLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWL 471
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-479 |
3.04e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 120.44 E-value: 3.04e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 8 LPIIAAIIIGFYPAKDIPANRIRLASLTVTGLVllwNMFILLKFDINNP-GMQFTEYLPwneTLGLSYHlgVDGLSILML 86
Cdd:PRK12663 12 LPLLCGLVLVFLRNRDRLQRYLAIGTLTILTLI---SLALLIYVQRHGPiTLDFGGWLP---PFGIQFT--GDSLSALMV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 87 VLNSFL-TWIAIYSSSKDTERPR--LFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAGMKF 163
Cdd:PRK12663 84 TTASFVaTAIMAYGFGDIEHSGRryGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQEREQLRGAIKY 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 164 LIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGI-VLGFGIKIPLIPFHtWLPDAYVEASAPIAI 242
Cdd:PRK12663 164 VVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLfLLAFGMKAALFPFM-WLPAAYHTPNTEVAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 243 LLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLA 322
Cdd:PRK12663 243 LFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 323 LVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGS 402
Cdd:PRK12663 323 INGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGL---YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGA 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2004377957 403 FSSFPISTILCVVASGLTAVYFVILLNRTCF-GKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRWSETTT 479
Cdd:PRK12663 400 LDNGAYILLALMLITSLITMYSLFRIFFLAYwGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNLTQDAA 477
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
159-472 |
4.11e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.07 E-value: 4.11e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILATFlGMVWlGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASA 238
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAF-GLLA-RESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 PIAILLGGILAKLGTYGLLRFG---LGmfPQTWHIIAPTLAIwGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAA 315
Cdd:PRK06521 243 HVSALMSGVMLKVAIYGILRVVfdlLG--APGWWWGVLVLAL-GAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 316 -----------AAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASS 384
Cdd:PRK06521 320 glamvfiaygmPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGL---IRRMPWTAWAFLIGCLAIS 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 385 GIPGLTGFIAEFISFQGSFSS-----------FPISTILCVVASGLTA-----VYFVILLNRTCFGKLQNnlAYypKVLW 448
Cdd:PRK06521 397 ALPPLNGFVSEWLLLQSLLSSpglpqwglklaVPIAAAMLALTAALAAmcfvkFYGITFLGRPRSEKAEE--AH--EVPR 472
|
330 340
....*....|....*....|....
gi 2004377957 449 NEKFPALILAFLIIFLGVQPTWLV 472
Cdd:PRK06521 473 WMRAAMLLLAALCVLLGLLPGWVA 496
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
66-469 |
5.98e-28 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 116.40 E-value: 5.98e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 66 WNETLGLSYHLG-VDGLSILMLVLNSFLTwiAIYSSSKDTERPRLFYS-LILFITGGVAGAFLSQNLLLFFLFYELELIP 143
Cdd:PRK08377 66 WKPPVGINLYIGpFAALFVLIIAIVSFIM--SIFSLKAVEVEPIDKYAmLFLLLMLGATGMIATGDIFNLFVFMEITAIT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 144 FYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLI 223
Cdd:PRK08377 144 AYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLIFGLAVEAELF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 224 PFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMF-PQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAY 302
Cdd:PRK08377 224 PLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQnANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAY 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 303 SSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMA 382
Cdd:PRK08377 304 SSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLG---KRMPLTALALTIGALS 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 383 SSGIPGLTGFIAEFISFQGSFSS-FPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLayypKVLWNEKFPALILAFLI 461
Cdd:PRK08377 381 TVGIPLFNVFWSKFRIILAGLSAgYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGERI----RENAAIGIILLLLAALI 456
|
....*...
gi 2004377957 462 IFLGVQPT 469
Cdd:PRK08377 457 VVIGIYPT 464
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-471 |
2.67e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 114.66 E-value: 2.67e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYpAKDIPANRIrlasLTVTGLVLLWNMFILLKFDINNPGMQFTEYLPWNETLGLSyhLGVDG 80
Cdd:PRK07691 5 LVILPILIPVITAILLIFL-GKRPIIQRY----VALIGSLLTLVAAIILVANVYKHGIQTLELGNWKAPFGIV--FVADM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWI----AIYSSSKDTERpRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNR 156
Cdd:PRK07691 78 FAALLVLTSSIITFLvilySFQTIGIERER-YYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 157 AYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQ-LILLAGIVL--GFGIKIPLIPFHTWLPDAY 233
Cdd:PRK07691 157 LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTgLITVVAILFlfVFATKAGLFPLYFWLPGSY 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 234 VEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILL 313
Cdd:PRK07691 237 YAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 314 AAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPGLTGFI 393
Cdd:PRK07691 317 GVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGL---IKRYPVLGWMFFIAALSLAGIPPLSGFY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 394 AEFISFQGSFSS-FPISTILcVVASGLTAVYFVILLNRTCF-----GKLQNNLAYYPKVLwnekFPALILAFLIIFLGVQ 467
Cdd:PRK07691 394 GKFFIVEGTFEAgFYVSGII-VLLSSLLVLYSVIKIFLKGFwgepkGYDLNNKVPVKKLL----LPAVVLVAITILYGLG 468
|
....
gi 2004377957 468 PTWL 471
Cdd:PRK07691 469 AEPL 472
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
1-472 |
1.03e-26 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 114.17 E-value: 1.03e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAkdipANRIRLASLT-VTGLVLLWNMFILLKFDINnpGMQFTEYLPWNETLGLSYHLGVD 79
Cdd:TIGR00940 1 LHSAFILPPFAASLIPILYPS----DQRIHIGWFVlAIPLVCFLYTLGLYPYTAS--GGVLHYTIDWVPELGLNFTLYMD 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 80 GLSILMLVL----NSFLTWIAIYSSSKDTERPRlFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKN 155
Cdd:TIGR00940 75 GLALLFSLLitgiGVLVVLYSIYYLSKEEPLPN-FYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 156 RA-YAGMKFLIYTAISGaliLATFLGMVWLGG-SHSFAFDTV---ATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLP 230
Cdd:TIGR00940 154 HSrYGAQKSLTITVFGG---LAMLGGLILLGKiTGSFSIDAViasADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 231 DAyVEASAPI-AILLGGILAKLGTYGLLRFglgmfpqtWHIIAPT------LAIWGAISAIYGAVVAITQKDIKRMVAYS 303
Cdd:TIGR00940 231 DA-MEAPTPVsAYLHSATMVKAGLYLLARF--------TPVFAGTeawfwiVGLAGLITLLWGSYFAIFQQDLKGILAFS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 304 SIGHMGYILLAA-------------AAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirgLP 370
Cdd:TIGR00940 302 TISQLGLIMVLLglgspsyhyqgddSKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHI---MP 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 371 LVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSS-----FPIST------ILCVVASGLTAVYFVILLNRTCFGKLQNn 439
Cdd:TIGR00940 379 ITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAhlvnpFDTVTlgylfpYVATVASVFTFVYSLRFIHGVFFGRPKP- 457
|
490 500 510
....*....|....*....|....*....|....*..
gi 2004377957 440 lAYYPK----VLWNEKFPALILAFLIIFLGVQPTWLV 472
Cdd:TIGR00940 458 -EDLPRkphePPRWMLASPDILVLLVLVFGLFPAQLT 493
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
146-472 |
4.43e-26 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.52 E-value: 4.43e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 146 LLISIWGGKNRAYAGMKFLIYTAISGALILATFLGmvWLGGSHSFAFDTVATANISAGMqLILLagivlGFGIKIPLIPF 225
Cdd:PRK12668 131 FLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILL--HYAETGSFAFGAIAGLGGTAAW-LILI-----GFGVNAAFPPL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 226 HTWLPDAYVEASAPIAILLGGILAKLGTYGLLRfglgMFPQTwhiiaPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSI 305
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGT-----ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIV 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 306 GHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSG 385
Cdd:PRK12668 274 SQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLY---RSMPLTALFCLVGALSISA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 386 IPGLTGFIAEFISFQGSF-SSFPISTILCVVASGLTAVYFVILLNRTCFgkLQNNLAYYPKVL-WNEKFPALILAFLIIF 463
Cdd:PRK12668 351 FPLFSGFVSKSMIISAAGeDHYVWVWLLLLLASAGTFLHFGIKLPYFAF--FGGDSGLRVKDApRNMLVAMGIAAFLCIA 428
|
....*....
gi 2004377957 464 LGVQPTWLV 472
Cdd:PRK12668 429 IGVYPQALY 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
83-474 |
7.03e-26 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 111.24 E-value: 7.03e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 83 ILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAGMK 162
Cdd:PRK08668 73 FFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 163 FLIYTAISGALILATFLGMVWLGgshSFAFDTVATANI---SAGMQLILLAgIVLGFGI-KIPLIPFHTWLPDAYVEASA 238
Cdd:PRK08668 153 FVLSAIGAYAMLYAIFLIYAKTG---TFDFADISQGLIndtSTGFALIVFL-FLLAFGVaKAGIFPLHVWAPDAYSEAPQ 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 PIAILLGGILAKLGTYGLLRF-----GLGMFPQTWHII-APT----LAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHM 308
Cdd:PRK08668 229 SFSAVLSGQLSKLGAYGFLLVlyvlpGTKLFSEFGTYRgVPLfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 309 GYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSGIPG 388
Cdd:PRK08668 309 GYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGL---IEKMPFTFAMYLVAIISLAGIPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 389 LTGFIAEFISFQGSFSS-FPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFPALILAFLIIFLGVQ 467
Cdd:PRK08668 386 MSGFASKWLIFEALISKgMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDHKDVKEAPLPMLIPMAILVLLNVVFGVA 465
|
....*..
gi 2004377957 468 PTWLVRW 474
Cdd:PRK08668 466 PGLVLQE 472
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-471 |
1.58e-25 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 110.79 E-value: 1.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYpAKDIPanRIRLASLTVTGLVLLWNMFILLKFDINNPGMqFTEYLPWNETLGLSYHLGVDG 80
Cdd:PRK12645 3 LLHIAILLPFIFALLIPFL-YKYFK--RIHTGWFVLPVPVVLFIYFLSLIPTTMSGNT-VMKTLPWIPSLGINFTLYVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVL----NSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNR 156
Cdd:PRK12645 79 LSLLFALLitgiGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 157 A-YAGMKFLIYTAISGALILATFLGMVWLGGSHSFAfDTVATANISAGMQLILLAGIVLGFG--IKIPLIPFHTWLPDAy 233
Cdd:PRK12645 159 SrYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIR-EMIANADEIQNSPLFIPAMILILLGafTKSAQFPFYIWLPDA- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 234 VEASAPI-AILLGGILAKLGTYGLLRF-GLGMFPQTWHIiapTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYI 311
Cdd:PRK12645 237 MEAPTPVsAYLHSATMVKAGIYLVARFtPIFAGSQVWFW---TVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 312 llaaaaaTPLALVGAVAQMFSHGI-------ILAILFHL-------------VGVIETKVGTRELDKLNGLMSPirgLPL 371
Cdd:PRK12645 314 -------MSLLGIGAASLHYQGDDskiyaaaITAAIFHLinhatfkgslfmiVGIVDHETGTRDIRKLGGLMTI---MPI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 372 VSALLVLGGMASSGIPGLTGFIAEFISFQG-----SFSSFPIST------ILCVVASGLTAVYFVILLNRTCFGKLQNNL 440
Cdd:PRK12645 384 TFTIALIGALSMAGLPPFNGFLSKEMFFESmlnatEANLFSLDTwgvlfpVIAWVASVFTFVYSIIFIFKTFFGKYKPEQ 463
|
490 500 510
....*....|....*....|....*....|....*
gi 2004377957 441 ayYPKVLWNEKF----PALILAFLIIFLGVQPTWL 471
Cdd:PRK12645 464 --LPKKAHEAPIgmliSPIILASLVVVFGLFPNIL 496
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
72-438 |
6.08e-25 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 107.13 E-value: 6.08e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 72 LSYHLGVDGLSILMLVLNSFLTWIAIYSSSK---DTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLI 148
Cdd:MTH00014 51 FTESLSSDMLSAPLITLTLWITALMILASFKifqNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 149 SIWGGK-NRAYAGMKFLIYTaISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIvLGFGIKIPLIPFHT 227
Cdd:MTH00014 131 LGWGYQpERLQASFYLMIYT-VTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITI-LAFMVKMPLYTVHL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAYVEASAPIAILLGGILAKLGTYGLLRFgLGMFPQTWHIIAPTL---AIWGAISAiygAVVAITQKDIKRMVAYSS 304
Cdd:MTH00014 209 WLPKAHVEAPVAGSMILAGILLKLGGYGLLRM-SSLFMHINKSLSAPFssiSLVGAVIT---SLICIRQPDLKSLIAYSS 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 305 IGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIRGLPLVSALLVLGGMASs 384
Cdd:MTH00014 285 VGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAA- 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2004377957 385 giPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQN 438
Cdd:MTH00014 364 --PPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPS 415
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
39-464 |
8.60e-25 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 106.60 E-value: 8.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 39 LVLLWNMFILLKFDINNPGMQFTEYlpwnetlGLSYHLGVDGLSILMLVLNSFLTWIAIYSSSKDTER---PRLFYSLIL 115
Cdd:MTH00205 23 FFSNLLLIGLFFSSFFFSNSFLMTS-------FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSnknSKLFTVSVI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 116 FITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGK-NRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDT 194
Cdd:MTH00205 96 MLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQpERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 195 vaTANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHI--IA 272
Cdd:MTH00205 176 --PLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFseLF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 273 PTLAIWGAISAiygAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVG 352
Cdd:MTH00205 254 FSISLWGGVMT---GMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 353 TRELDKLNGLMSPIRGLPLVSALLVLGGMASSGIPGLTGFIAEFISfqGSFSSFpISTILCVVASGLTAVYFVILLNRTC 432
Cdd:MTH00205 331 SRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMS--LLSSSK-ISGIPLSLISFLSGAYSLYLYSQSQ 407
|
410 420 430
....*....|....*....|....*....|..
gi 2004377957 433 FGKLQNNLAYYPKVLWNEKFPALILAFLIIFL 464
Cdd:MTH00205 408 HGKVSSQISSFLAISEREYYILILHWFPLNIL 439
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-433 |
3.82e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 105.20 E-value: 3.82e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 76 LGVDGLSILMLVLNSFLTWIA----IYSSSKDTERPRL--FYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLIS 149
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSvlygIYPNRKEISVNKIpsFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 150 IWGGKNRAYAGMKFLIYTAISGA--LILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAgIVLGFGIKIPLIPFHT 227
Cdd:PRK12662 152 MGRDKKALVAAFEYLIIGTIGATfyLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF-IMVGLFIKAALFPFHK 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAP----TLAIWGAISAIYGAVVAITQKDIKRMVAYS 303
Cdd:PRK12662 231 WLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 304 SIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMAS 383
Cdd:PRK12662 311 SISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLW---KSMPKITLAFVLLSLSL 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2004377957 384 SGIPGLTGFIAEFISFQGSFSS-FPISTILCVVASGLTAVYFVILLNRTCF 433
Cdd:PRK12662 388 IGMPPTSGFVAKWYILDAFIKSnAWIGLVVLLVGSGLSVIYVWKIVEALYF 438
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
72-469 |
4.57e-24 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 104.67 E-value: 4.57e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 72 LSYHLGVDGLSILMLVLNSFLTWIAIYSS----SKDTER-PRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYL 146
Cdd:MTH00044 53 LSLSLATDSLSSPLIILSCWLAPLSLLASinhlSNNSPNnQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 147 LISIWGG-KNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSF-AFDTVATANISAGMQLILLAGIVLGFGIKIPLIP 224
Cdd:MTH00044 133 LITRWGAqKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIpLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 225 FHTWLPDAYVEASAPIAILLGGILAKLGTYGLLR-FGLGMFPQTWHIIAP--TLAIWGAISAiygAVVAITQKDIKRMVA 301
Cdd:MTH00044 213 FHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRlINLFSLPSANNISFIliVFCCWGALIT---SIICLRQTDLKALIA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 302 YSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELdklnglmSPIRGLPLVSALLVLGGM 381
Cdd:MTH00044 290 YSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTL-------SITRGFKLITPLLPLWWL 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 382 ASS----GIPGLTGFIAEFISFQG----SFSSFPISTIlcvvASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLWNEKFP 453
Cdd:MTH00044 363 IFCaanlGLPPLPNLIGELLIISSiiswSILSFPIIGL----ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLL 438
|
410
....*....|....*.
gi 2004377957 454 ALILAFLIIFLGVQPT 469
Cdd:MTH00044 439 IFLHLLPLILIIINPN 454
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
65-444 |
8.88e-24 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 103.74 E-value: 8.88e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 65 PWNETLGLSYHLGVDGLSILMLVLNSFLTWIAIYSS-----SKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYEL 139
Cdd:MTH00124 45 PYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILASqnhlqHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 140 ELIPFYLLISIWGG-KNRAYAGMKFLIYTAISGALILATFLGM-VWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFG 217
Cdd:MTH00124 125 TLIPTLILITRWGNqPERLSAGTYFLFYTLISSLPLLIAILYLhNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 218 IKIPLIPFHTWLPDAYVEAsaPIA--ILLGGILAKLGTYGLLRFGLGMFPQTWHIIAP--TLAIWGAISAiygAVVAITQ 293
Cdd:MTH00124 205 VKMPLYGLHLWLPKAHVEA--PIAgsMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPflTLALWGALMT---SLICLRQ 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 294 KDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGlMSPIrgLPLVS 373
Cdd:MTH00124 280 TDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRG-LQLL--LPLMT 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2004377957 374 ALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYP 444
Cdd:MTH00124 357 TWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQ 427
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
72-440 |
3.78e-23 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 101.96 E-value: 3.78e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 72 LSYHLGVDGLSILMLVLNSFLTWIAIYSSSKDT-----ERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYL 146
Cdd:MTH00127 53 LNLYMATDPLSTPLLVLTCWLLPLMILASQNHTapepiNRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 147 LISIWGGK-NRAYAGMKFLIYT-AISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIP 224
Cdd:MTH00127 133 IITRWGNQtERLNAGTYFLFYTlAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 225 FHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAP--TLAIWGaisAIYGAVVAITQKDIKRMVAY 302
Cdd:MTH00127 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPfiILALWG---IIMTGSICLRQTDLKSLIAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 303 SSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirgLPLVSALLVLGGMA 382
Cdd:MTH00127 290 SSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMI---LPLMATWWFIASLA 366
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2004377957 383 SSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNL 440
Cdd:MTH00127 367 NLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHI 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
78-471 |
1.76e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.02 E-value: 1.76e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILMLVLNSFLTWIAIYSSSKDTERPRL----FYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGG 153
Cdd:TIGR01770 68 VDNFALLIKLILLLSTLLTFFFALSYLSKEKInkfeFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 154 KNRAY-AGMKFLIYTAISGALILATFLGMVWLGGSHSFAfdtVATANISAGMQLI--LLAGIVL---GFGIKIPLIPFHT 227
Cdd:TIGR01770 148 SRFSTeAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFE---DLLLFLSNGMLNIslLLLGIVLilvGLLFKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAYVEASAPIAILLGgILAKLGTYG----LLRFGLGMFPQTWHIIaptLAIWGAISAIYGAVVAITQKDIKRMVAYS 303
Cdd:TIGR01770 225 WVPDVYEGAPTPVTAFFS-IVPKIAIFAvflrLFLYILFGFSEAWQIF---LAIIAFLSMLIGNFGALAQKKVKRLLAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 304 SIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIET--KVGTRELDKLNGLmspIRGLPLVSALLVLGGM 381
Cdd:TIGR01770 301 SISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSykDEWIEYISDFAGL---FKTNPILAILILIFMF 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 382 ASSGIPGLTGFIAEFISFQGSF-SSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNlAYYPKVLWNEKFPALILAFL 460
Cdd:TIGR01770 378 SLAGIPPLAGFFGKFYVFFALLkSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERR-IPSNPQSKAQSLLLSISALF 456
|
410
....*....|.
gi 2004377957 461 IIFLGVQPTWL 471
Cdd:TIGR01770 457 ILFLGLFPSLI 467
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
64-461 |
3.60e-22 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 100.21 E-value: 3.60e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 64 LPWNETLGLSYHLGVDGLSiLMLVLNSFLTWIAI------YSSSKDTERPRLFYSLILFITGgVAGAFLSQNLLLFFLFY 137
Cdd:PRK12646 62 IPWMKTLDINLDLRLDGLS-LMFSLIISLIGIAVffyatqYLSSRKDNLPRFYFYLTLFMFS-MIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 138 ELELIPFYLLISIW-GGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLI-LLAGIVLG 215
Cdd:PRK12646 140 ELTSVSSFLLISYWyNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIpMIFMFLLG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 216 FGIKIPLIPFHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAiwGAISAIYGAVVAITQK 294
Cdd:PRK12646 220 AFTKSAQFPFHIWLPRA-MAAPTPVsAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFV--GLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 295 DIKRMVAYSSIGHMGYILLA--------------AAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLN 360
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMvgigggyaqhqqdaIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILS 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 361 GLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEFISF----------QGSFSSFPISTILCVVASGLTAVYFVILLNR 430
Cdd:PRK12646 377 GMR---QLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltqtgqlsQFSLISMIIIVFIGVIASIFTFTYALYMVKE 453
|
410 420 430
....*....|....*....|....*....|....*
gi 2004377957 431 TCFGKLqnNLAYYPKVLWNEKF----PALILAFLI 461
Cdd:PRK12646 454 VFWGKY--DSKVFTKKNIHEPWlfslPSLILMVLV 486
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
63-440 |
1.13e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 97.68 E-value: 1.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 63 YLPWNETLGLSYHLGVDGLSILMLVLNSFLTWIAIYSS----SKDTE-RPRLFYSLILFITGGVAGAFLSQNLLLFFLFY 137
Cdd:MTH00068 43 NLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILASqnhlKNEPInRQRTYISMLIILQLTLILAFSATELILFYIFF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 138 ELELIPFYLLISIWGG-KNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAF-DTVATANISAGMQLILLAGIVLG 215
Cdd:MTH00068 123 EATLIPTLIIITRWGNqEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILlELMSPMQLMTYTNKIWWLACLLA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 216 FGIKIPLIPFHTWLPDAYVEAsaPIA--ILLGGILAKLGTYGLLRFGLGMFPQTWHIIAP--TLAIWGAISAiygAVVAI 291
Cdd:MTH00068 203 FMVKMPLYGLHLWLPKAHVEA--PIAgsMILAAVLLKLGGYGILRISILLTPLSKELSYPfiILALWGVLMT---SLICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirgLPL 371
Cdd:MTH00068 278 RQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTI---LPL 354
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2004377957 372 VSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNL 440
Cdd:MTH00068 355 MATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHL 423
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
39-383 |
1.82e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 96.76 E-value: 1.82e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 39 LVLLWNMFILLKFDINNPGMQFTeylpwnetLGLSYHLGVDGLSILMLVLN---SFLTWIAIYSSSKDTERPRLFYSLIL 115
Cdd:MTH00163 23 LVQSLLFLLSFLFMLLFSLSFYF--------SNISYFFGLDLLSFGLILLSfwiCMLMILSSESVYKKNNYSNLFLFLIL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 116 FITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGK-NRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDt 194
Cdd:MTH00163 95 FLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLL- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 195 vataNISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEasAPIA--ILLGGILAKLGTYGLLRFgLGMFPQTWHIIA 272
Cdd:MTH00163 174 ----NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVE--APVSgsMILAGVLLKLGGYGLLRV-MSFFSKLGLKFN 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 273 PTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVG 352
Cdd:MTH00163 247 YIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLG 326
|
330 340 350
....*....|....*....|....*....|.
gi 2004377957 353 TRELDKLNGLMSPIRGLPLVSALLVLGGMAS 383
Cdd:MTH00163 327 SRSLLINKGLLNFMPSMSLWWFLLSSSNMAA 357
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
46-474 |
3.05e-21 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 97.42 E-value: 3.05e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 46 FILLKFDINNPGMQFTEYLPWNETLG-----LSYHLGVDGLSIL--MLVLnSFLTWIAIYSSS--KDTERPRLFYSLILF 116
Cdd:PRK12650 40 LLLKELPPILDGDALTWSVTWIPDLLgngvdVNLALRADALSLFfaLLAL-VIGAVVFIYSARylPRKKGNTSFYLLMTA 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 117 ITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAgMKFLIYTAISGALILATFLGMVWLGGSHS------- 189
Cdd:PRK12650 119 FMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAVAIAATQTGTTSlsgilhs 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 190 --FAFDTVATANISagmqlILLAgiVLGFgIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGlGMFP-- 265
Cdd:PRK12650 198 dvWAEKPGLTTVVA-----VLIA--VAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS-PVFHdv 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 266 QTWHIIaptLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVG 345
Cdd:PRK12650 269 AVWNWL---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIG 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 346 VIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGfiaeFISFQGSFSSF---PIST---ILCVVASGL 419
Cdd:PRK12650 346 VVDHQAGTRDIRRLGSLW---RRMPFTFVSVTIAALSMAAVPPLFG----FVSKEGMLTAFleaPGGNagvVLLLVGAAL 418
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2004377957 420 TAVYFVILLNRTCFGKL------QNNLAYYPKVLWnekFPALILAFLIIFLGVQPTWLVRW 474
Cdd:PRK12650 419 GAVFTFAYSARLVLGAFvdgprdMSHVKEAPVSLW---LPAALPGALSLPLGLVPGLLDAP 476
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-465 |
1.09e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 92.34 E-value: 1.09e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDIPANRIRLASLTVtGLVLLWNMFILLKFDINNPGMQFTEYL-PWNETLGLSYHLG-- 77
Cdd:TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSV-GLSAALSAFVFVDFFLNGEGEAFTQSLfPWISVGGFQVDFGlr 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILMLVLNSFL-TWIAIYSS---SKDTERPRLFYSLILFITGGVAgAFLSQNLLLFFLFYELELIPFYLLISIWGG 153
Cdd:TIGR01974 81 LDGLSLTMLVVVTGVgSLVHIYSIgymAHDEGYSRFFAYLNLFTFSMLM-LVLADNFLQLFFGWEGVGLCSYLLIGFWYK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 154 K-NRAYAGMKFLIYTAISG-ALILATFLGMVWLGgshSFAFDTVATANISAGMQLILLAGIVLGFGI--KIPLIPFHTWL 229
Cdd:TIGR01974 160 KpSANNAAIKAFVVNRVGDfGLLLGIFLIFWYFG---TLNFQEVFALAPGAFFSALTLICLLLFIGAmgKSAQLPLHTWL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 230 PDAyVEASAPIAILL-GGILAKLGTYGLLRFGlGMF---PQTWHIIAptlaIWGAISAIYGAVVAITQKDIKRMVAYSSI 305
Cdd:TIGR01974 237 PDA-MEGPTPVSALIhAATMVTAGVYLVARTS-PLFelsPTALYLVT----IIGAITALFAATVALVQNDIKRILAYSTM 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 306 GHMGYIllaAAAATPLALVGAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLNGLMSPIrglPLVSALLVLGGMASS 384
Cdd:TIGR01974 311 SQLGYM---FLALGVGAYAAAIFHLMTHAFFKALLFLGAGsVIHAMHHEQDIRKMGGLRKKM---PVTYITFLIGSLALI 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 385 GIPGLTGFIAEFISFQGSFSSFPIST--ILCVVASGLTAVYFVILLNRTCFGKLQ----NNLAYYPKVLWnekFPALILA 458
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFlfVAGLIGAFLTAFYSFRLIFMVFHGKERheadAHPHESPLVML---LPLIVLA 461
|
....*..
gi 2004377957 459 FLIIFLG 465
Cdd:TIGR01974 462 VGSVFAG 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
61-486 |
1.80e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 88.82 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 61 TEYLPWNETLGLSYHLGVDGLSILMLVLNSFL-TWIAIYSSSKDTERPRL--FYSLILFITGGVAGAFLSQNLLLFFLFY 137
Cdd:PRK12647 45 RGGYAWVPSLGVNLSFLLDGLSLTFALLITGIgTLIVLYAGGYLKGHPDLgrFYSYILLFMASMLGLVLSDNLITLFVFW 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 138 ELELIPFYLLISIWGGKNRAY-AGMKFLIYTAISGALILATFLGMVWLGGSHSFAfDTVATANISAGMQLILLAGIVLGF 216
Cdd:PRK12647 125 ELTSITSFLLIGFNHEREAARrAALQALLVTGGGGLALLAGLILLGNVTGTYSLS-ELLASGDVIREHPLYLAILLLVLG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 217 G--IKIPLIPFHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRF--GLGMFPqTWHIiapTLAIWGAISAIYGAVVAI 291
Cdd:PRK12647 204 GafTKSAQFPFHFWLPNA-MEAPTPVsAYLHSATMVKAGIYLLARLnpVLGGTP-LWQT---ILPLFGGLTMLTGALLAV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPL 371
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR---RAMPI 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 372 VSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPIS---TILCVVASGLTAVYFVILLNRTCFGKL---QNNLAYYPK 445
Cdd:PRK12647 356 TAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSlilTVAAVLGNALMVAVAFLVGIKPFLGKLvetPKHPHEAPV 435
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2004377957 446 VLWnekFPALILAFLIIFLGVQPTWLVRWsetTTTAMVTAI 486
Cdd:PRK12647 436 LMW---LGPAVLAVLGLLFGLFPFFFHAA---LLSPAASAV 470
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
103-466 |
2.24e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.50 E-value: 2.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 103 DTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAGMKFLIytAISGALILAtFLGMV 182
Cdd:PRK08676 97 DPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIF--IASTAMIFA-FIGLI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 183 WL-------GGSHSFAFDTVA--TANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGT 253
Cdd:PRK08676 174 FLfsltrqaLGTGTLNWTELAahASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGI 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 254 YGLLR-FGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFS 332
Cdd:PRK08676 254 YGILRlSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 333 HGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTIL 412
Cdd:PRK08676 334 HSLVKSGLFFSAGILHRQYRSDRFDRIFDVF---RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLA 410
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2004377957 413 CVVASGLTAVYFVILLNRTcFGKLQNNLAYYP--KVLWNEKFPALILAFLIIFLGV 466
Cdd:PRK08676 411 VLLLLLLAASSFAIFLLKA-FTRVSEGNADRPvfRTPLSMKLPIVIILALVLALGV 465
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-472 |
2.95e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 88.32 E-value: 2.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAkdipanRIRLASLTVTGLVLLWNMFILLK-----FDinnpGMQFTEYLPWNETLGLSYH 75
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLPR------NARNAEAWLAGLVALAALVLLALlypavAA----GEVIRAEIEWLPALGLNLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 76 LGVDGLSIL--MLVLNSFLTWI--AIYSSSKDTERPRlFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIW 151
Cdd:PRK12648 72 LRLDGLAWLfaLLILGIGLLVVlyARYYLSPADPVPR-FFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 152 GGKNRAYAGMKF-LIYTAISGaliLATFLGMVWLGgsH---SFAFDTV--ATANISA-GMQLILLAGIVLGFGIKIPLIP 224
Cdd:PRK12648 151 HHRADARRGARMaLTVTGAGG---LALLAGVLLLG--HivgSYDLDVVlaAGDLIRAhPLYPPALVLILLGAFTKSAQFP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 225 FHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRFglgmFP-----QTWHIIApTLAiwGAISAIYGAVVAITQKDIKR 298
Cdd:PRK12648 226 FHFWLPHA-MAAPTPVsAYLHSATMVKAGVFLLARL----WPvlagtEEWFWIV-GGA--GLITLLLGAYFALFQHDLKG 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 299 MVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVL 378
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLR---RLMPITATLAMV 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 379 GGMASSGIPGLTGFI------AEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPkvlwNE-- 450
Cdd:PRK12648 375 AAAAMAGVPLLNGFLskemffAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGPPPDDLPKTP----HEpp 450
|
490 500
....*....|....*....|....*
gi 2004377957 451 ---KFPALILAFLIIFLGVQPTWLV 472
Cdd:PRK12648 451 rwmRAPVELLVLLCLLVGIFPALTV 475
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
213-439 |
5.74e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 85.73 E-value: 5.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 213 VLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLR-FGLGMFpqtwhIIAPTLAIWGAISAIYGAVVAI 291
Cdd:MTH00094 158 SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRiLGSLNF-----VYNNFWIIFSLLGMILSSFCCV 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIRglpL 371
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSM---F 309
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2004377957 372 VSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNN 439
Cdd:MTH00094 310 FGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSN 377
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
171-403 |
8.41e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 86.42 E-value: 8.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 171 GALILATFLGMVWLG-GSHSFAFDTVATANISAGMQLILLAgiVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILA 249
Cdd:PRK08042 146 GTLLLAIACWLLWQRyGTLDLRLLDMRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVM 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 250 KLGTYGLLRFGL--GMFPQTWHIIaptLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAA-----------A 316
Cdd:PRK08042 224 KIGLLGILTLSLlgGNAPLWWGVA---LLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLgagvtgialeqP 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 317 AATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEF 396
Cdd:PRK08042 301 ALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIG---KKMPVISIAMLVGLMAMAALPPLNGFAGEW 377
|
....*..
gi 2004377957 397 ISFQGSF 403
Cdd:PRK08042 378 VIYQSFF 384
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-474 |
2.76e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 85.36 E-value: 2.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 47 ILLKFDINNPGMQFTEYLPWNETLGLSYHLGVDGLSILMLVLNS-----FLTWIAIYSSSKDTERPRLFYSLILFiTGGV 121
Cdd:PRK12644 41 VLAQWPAVLAGGAPTEVVPWIPSLGLDLAFRLDALAALMSLLVLgvgalVLLYCARYFDDDEPRLGRFAAELVAF-AGAM 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 122 AGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRA-YAGMKFLIYTAISGaliLATFLGMVWLG---GSHSFA---FDT 194
Cdd:PRK12644 120 FGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASrRAALQALLVTTAGG---LAMLVGIIILGqaaGTYRLSellADP 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 195 VATANISAGMQLILLAGIVlgfgiKIPLIPFHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRFGLGM-FPQTWHiia 272
Cdd:PRK12644 197 PTGPAVSVAVVLILVGALS-----KSAIVPFHFWLPGA-MAAPTPVsAYLHAAAMVKAGIYLVARLAPGFaDVPVWR--- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 273 PTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVG 352
Cdd:PRK12644 268 PTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 353 TRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAE------FISFQGSFSSFPISTILCVVASGLTAVYFVI 426
Cdd:PRK12644 348 TRDIRKLSGLG---RRQPVLAVVAALAAASMAGLPPLLGFVAKeaaleaVLHDGALGPAGPVVLAGIVLGSILTVAYSLR 424
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2004377957 427 LLNRTCFGKLQNNL----AYYPKVLWNEKFPALILAFLIIFLGVQPTWLVRW 474
Cdd:PRK12644 425 FLWGAFARKPGAFPsvavTEMHRPSPLFLAPPAVLAVLGLVLGLLPAPLDAL 476
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
142-436 |
3.14e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 84.17 E-value: 3.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 142 IPFYLLISIWGGKN-RAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILL-AGIVLGFGIK 219
Cdd:MTH00110 127 IPTLIIITRWGNQTeRLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLwLACMMAFMVK 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 220 IPLIPFHTWLPDAYVEAsaPIA--ILLGGILAKLGTYGLLRFGLGMFPQTWHIIAP--TLAIWGAI--SAIygavvAITQ 293
Cdd:MTH00110 207 MPLYGLHLWLPKAHVEA--PIAgsMVLAAILLKLGGYGMMRITIILNPLTEFMAYPflMLSLWGMImtSSI-----CLRQ 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 294 KDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirgLPLVS 373
Cdd:MTH00110 280 TDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTL---LPLMA 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2004377957 374 ALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKL 436
Cdd:MTH00110 357 TWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKL 419
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-473 |
3.41e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 84.10 E-value: 3.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 70 LGLSYHLgvDGLSILMLVLNSFLTWIAIYSSSK--------DTERPRLFYSLILFITGGVAgafLSQNLLLFFLFYELEL 141
Cdd:PRK06589 75 YSIGLHL--EPLGLIFLLLIGFLWICALLYTPKylainnidSSSRFLFFFNLTILIGVLIA---LSSDLFTMFVCYELLT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 142 IPFYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLG-GSHSFAFDTVATANISAGMQLILLAGIvlgfgIKI 220
Cdd:PRK06589 150 ISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKtGNLDFVSGGLFSKNQSIILLLMFIYGI-----AKT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 221 PLIPFHTWLPDAYVeASAPIAILLGG-ILAKLGTYGLLRFGLGMF----PQTWHIIAPTLAIWGAISAIYGAVVAITQKD 295
Cdd:PRK06589 225 AIFPVHSWLPAAMV-AHYPVSALLHAvIVVKTGLFCIYKILLYIFglsyLQRIFAEFNWLIFIPIVSIFYSSLKALKTDN 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 296 IKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMspiRGLPLVSAL 375
Cdd:PRK06589 304 IKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTS---KSFPLISFI 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 376 LVLGGMASSGIPGLTGFIAEFISFQGSFSS-----FPISTILCVVASGLTAVYFVILLNRTCFGKLQNNlAYYPKVLWNE 450
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQnqpwlSIIVMLVVIASSILSALYLLKILSSIYKPSLSEN-SFITKSLPYL 459
|
410 420
....*....|....*....|...
gi 2004377957 451 KFPALILAFLIIFLGVQPTWLVR 473
Cdd:PRK06589 460 MQISVITCCCALTLFYFIQILIR 482
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
57-469 |
5.70e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 84.11 E-value: 5.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 57 GMQFTEYLPWNETLGLSYHLGVDGLSILMLVLNSFLTWIAIYSS----SKDTERPRLFYSLILFItGGVAGAFLSQNLLL 132
Cdd:PRK12649 57 GTIITGSISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSngymSHKEDLPRYYQYLLLFM-GSMIGMVFSGNTIQ 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 133 FFLFYELELIPFYLLISIWGGKNRA-YAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISA----GMQLI 207
Cdd:PRK12649 136 LFIFWELTSITSFMLIGYWRHRPESvYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikghPLFLI 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 208 LLAGIVLGFGIKIPLIPFHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRfglgMFP-----QTWHIIAPTLaiwGAI 281
Cdd:PRK12649 216 TLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVsAFLHSATMVKAGVYLVAR----IHPifsgtEAWFILVSGT---GMI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 282 SAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATP----LALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELD 357
Cdd:PRK12649 288 TMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIR 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 358 KLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFS-----SFPISTIL---CVVASGLTAVYFVILLN 429
Cdd:PRK12649 368 KLGGLR---KEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEmgaliGGPFTIIIpavAVLGGVFTFAYSIKLID 444
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2004377957 430 RTCFGKLQNNLA--YYPKVLWNEKFPALILAFLIIFLGVQPT 469
Cdd:PRK12649 445 GIFLGERTHDHLphHIHEAPYVMLIPAAFLAGLVILFGLVPS 486
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-422 |
1.14e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 82.59 E-value: 1.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 6 IWLPIIAAIIIGFYPAKDIPANRIrlasLTVTGLVLLWNMFILLKFDINNPGMQFteYLP--WNETLGLSyhLGVDGLSI 83
Cdd:PRK12666 12 ILLPLLTAALLLLLDERRRRLKRA----ISLASTLLLLAVAVALLASAAAGGIGV--YLLgnWPAPFGIV--LVLDRLSA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 84 LMLVLNSFLTWIA-IYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNRAYAGMK 162
Cdd:PRK12666 84 LMLLLTALLALAAlLYALAGWDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 163 FLIYTAISGALILATfLGMVW-LGGSHSFAFDTVATANISAGMQLILLAGIVL---GFGIKIPLIPFHTWLPDAYVEASA 238
Cdd:PRK12666 164 YVAINLVASSLFLIG-VGLIYgVTGTLNMADLAQRIAQLPAADRALLEAGAALllvVFLIKAAMWPLNFWLPPAYAAASA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 PIAILLGgILAKLGTYGLLRFGLGMFPQTWHIIAP---TLAIWGAISAI-YGAVVAITQKDIKRMVAYSSIGHMGYILLA 314
Cdd:PRK12666 243 PVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGfgqDWLLPGGLATLaFGAIGVLAAQRLRRLAAYLVLVSSGTLLAA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 315 AAAATPLALVGAVAQMFSHGIILAILFHLVGVIET--------KVGTRELDKLNGLMSPIRGLPLVSALLVLGG------ 380
Cdd:PRK12666 322 IGLGNPAATAAALYYLVHSTLAAAALFLLADLVERqrgaaadrLAVTPELYDLDEEEEEEVGVAIPATMALLGLlffica 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2004377957 381 MASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVA----SGLTAV 422
Cdd:PRK12666 402 LALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWAlvllSGLAAL 447
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
78-423 |
2.49e-15 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 78.91 E-value: 2.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 78 VDGLSILMLVLnsfLTWIA----IYSS---SKDTERPRLFYSLILFiTGGVAGAFLSQNLLLFFLFYELELIPFYLLISI 150
Cdd:PRK07376 89 IDPLGAVMLVL---VTTVAllvmIYSDgymAHDPGYVRFFAYLSLF-SSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 151 W-GGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGShsFAFDT--------VATANISAGMQLILLAGIVLGFGIKIP 221
Cdd:PRK07376 165 WyDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGS--FDFDGiadrlselVSSGAVSGWLALLLCILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 222 LIPFHTWLPDAyVEASAPIAILL-GGILAKLGTYGLLRfglgMFPQTWHI--IAPTLAIWGAISAIYGAVVAITQKDIKR 298
Cdd:PRK07376 243 QFPLHVWLPDA-MEGPTPISALIhAATMVAAGVFLVAR----MYPVFEQFpaVMTVIAWTGAITAFLGASIALTQNDIKK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 299 MVAYSSIGHMGYIllaaaaaTPLALVGA-VAQMF---SHGIILAILFHLVG-VI---ETKVGTRE-LDKLNGLMSPIRG- 368
Cdd:PRK07376 318 GLAYSTISQLGYM-------VMAMGCGAySAGLFhlmTHAYFKAMLFLGSGsVIhgmEEVVGHDPvLAQDMRLMGGLRKy 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2004377957 369 LPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVY 423
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFY 445
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
159-415 |
8.36e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.58 E-value: 8.36e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILATFLGMVWLGGSHsFAFDTVATANISAGMQ-----LILLAGIVLGFGIKIPLIPFHTWLPDAY 233
Cdd:CHL00049 163 ATMKYLLMGGASSSILVYGFSWLYGLSGGE-IELQEIVNGLINTQMYnspgiSIALIFITVGIGFKLSLAPFHQWTPDVY 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 234 VEASAPIAILLGgILAKLGTYGLL-RFGLGMFP---QTWHIIAPTLAIwgaISAIYGAVVAITQKDIKRMVAYSSIGHMG 309
Cdd:CHL00049 242 EGSPTPVVAFLS-VTSKVAASALAtRIFDIPFYfssNEWHLLLEILAI---LSMILGNLIAITQTSMKRMLAYSSIGQIG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 310 YIllaaaaatplaLVGAVAQMFSHG---IILAILFHLVGVIET---------KVGTRELDKLNGLM--SPIRGLPLVSAL 375
Cdd:CHL00049 318 YV-----------IIGIIVGDSNDGyasMITYMLFYIFMNLGTfacivlfglRTGTDNIRDYAGLYtkDPFLALSLALCL 386
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2004377957 376 LVLGgmassGIPGLTGFIAEFISF-----QGSFSSFPISTILCVV 415
Cdd:CHL00049 387 LSLG-----GIPPLAGFFGKLYLFwcgwqAGLYFLVSIGLLTSVI 426
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-404 |
2.98e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 72.30 E-value: 2.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFY-----PAKDIPANRIRLASLTVTGLVLLWNMFIllkfdinNPGMQFTEYLPWNETLGLSYH 75
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFgrligTIGSGILSTICMGSSTLIALFLAYEVLI-------NDAVVHIELYKWIESEIFITH 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 76 LGV--DGLSILML-VLNSFLTWIAIYSSS---KDTERPRLFYSLILFiTGGVAGAFLSQNLLLFFLFYELELIPFYLLIS 149
Cdd:MTH00032 74 IGLlyDTLSVTMLlVISSISTLVHIYSTSymsDDPHVPRFLCYLSLF-TFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 150 IWGGKNRA-YAGMKFLIYTAISGaliLATFLGMVWLGGS-HSFAFDTVATANISAGmqlILLAGIVLGFGIKIPLIPF-- 225
Cdd:MTH00032 153 FWTTRIQAnKAAIKAIVVNRVGD---VGVILGMVLIYKTiGSLDFLTFNGGSVGSG---IMDRGYYGGGAYESPLAPFai 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 226 ------------------HTWLPDAyVEASAPIAILL-GGILAKLGTYGLLRfGLGMF---PQTWHIIAptlaIWGAISA 283
Cdd:MTH00032 227 igillligcigksaqlglHTWLPDA-MEGPTPVSALIhAATMVTAGVFLMIR-SFPLFekaPLTLLIIT----IFGALTA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 284 IYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLALvgAVAQMFSHGIILAILFHLVGVI--ETKVGTRELDKLNG 361
Cdd:MTH00032 301 FFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAGSVihSTTVDEQDMRKMGG 378
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2004377957 362 LmspIRGLPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFS 404
Cdd:MTH00032 379 L---IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYS 418
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
144-461 |
2.52e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 68.13 E-value: 2.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 144 FYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAFDTVATANISAGMQLILLAG---IVLGFGIKI 220
Cdd:MTH00196 30 FILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGyllIIVALLFKL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 221 PLIPFHTWLPDAYvEASAPIAILLGGILAKLGTYGLL-RFGLGmfpqtwhiiAPTLAIWGAISAIYGAVVAITQKDIKRM 299
Cdd:MTH00196 110 SVAPFHMWAPDVY-EGAPTKTTALLAIVPKLGIFSILvSIGLN---------VNILLIGGLFSLFVGAIGALNQTKIKRL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 300 VAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTreLDKLNGLMspiRGLPLVSALLVLG 379
Cdd:MTH00196 180 LAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNL--IIEFSGLS---RRLPILAITLALT 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 380 GMASSGIPGLTGFIAEF-ISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLqNNLAYYPKVLWNEKFPALILA 458
Cdd:MTH00196 255 FLSIAGIPPLVGFLGKWlILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFFQAN-SFLLISTKILKKENKINLRKA 333
|
...
gi 2004377957 459 FLI 461
Cdd:MTH00196 334 LLI 336
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-472 |
4.29e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 68.13 E-value: 4.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKDipanRIRLASLTVTGLVLLWNMFIllkfdinnpgMQFTEYLPWNETLGLSYHLGV-- 78
Cdd:PRK06277 3 LLPLMVVFPMICAIIFNLLHGKD----KLIKYLTFIVAILLPILPFL----------ASYGYYYFGGHGLVNGYHSGIty 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 79 --DGLSILMLVLNSFLTWIAIYSSSKDTERPRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWGGKNR 156
Cdd:PRK06277 69 lfNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 157 AYAGMKFLIYTAISGALILatfLGMVWLGGSHSFAFDT----VATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDA 232
Cdd:PRK06277 149 YKAALKYMILGNVAGSILL---LGIGFLLASTGTLNITdihnALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 233 YVEASAPIAILLGGiLAKLGTYGLLRFGLGMFPQTWHIIAPTLAI--WGAISAIYGAVVAITQKDIKRMVAYSSIGHMGY 310
Cdd:PRK06277 226 YAKAKPFGSALLQT-FSKFVLVALMLVIFKLFGGLSYFPSAQGVLiaLSVLAMVFGVVMALLQTDYKRLLAYHAISQGGY 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 311 ILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPIrglPLVSALLVLGGMASSGIPGLT 390
Cdd:PRK06277 305 VAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVM---PVVAFMVLCAKLAISGVPPFN 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 391 GFIAEFISFQGSFSS-FPISTILCVVASGLTAVYFV----ILLNRTCFGKLQNNLAYYPKVlwnEKFPALILAFLIIFLG 465
Cdd:PRK06277 382 GFQSKLMLAQAAMQAnMPELAIIMIIVSIGTFVSMMkafyLIYLKPKPEELEYKNKKVPKY---AVFSLAVLTILCIILG 458
|
....*..
gi 2004377957 466 VQPtWLV 472
Cdd:PRK06277 459 LFP-DLV 464
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-465 |
7.50e-12 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 67.49 E-value: 7.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYP--AKDIPANRIRLASL---TVTGLVLLWNMFillkfdiNNPGMQFTEYL-PWNETLGLSY 74
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFGrrIGEKWAHLVGTGLVglsALLSLVVFFDFL-------LGGGRAFSQTLwTWISVGDFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 75 HLG--VDGLSILMLVLNSFLTW-IAIYSS---SKDTERPRLFYSLILFItggvagaF------LSQNLLLFFLFYELELI 142
Cdd:PRK06590 77 DFGlrVDGLSATMLVVVTGVSFlVHIYSIgymAHDEGYRRFFAYLNLFT-------FsmlmlvLSDNLLQLFFGWEGVGL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 143 PFYLLISIWGGKNRA-YAGMKFLIYTAISG-ALILATFLgMVWLGGShsFAFDTVATANISA---GMQLILLAGIVLGFG 217
Cdd:PRK06590 150 CSYLLIGFWYKKPSAgAAAMKAFIVNRVGDvGLALGIFL-LFAEFGS--LNYDEVFAAAPQFfglGWSALTLICLLLFIG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 218 I--KIPLIPFHTWLPDAyVEASAPIAILlggILAKL----GTYGLLRFGlGMFPQTwHIIAPTLAIWGAISAIYGAVVAI 291
Cdd:PRK06590 227 AmgKSAQFPLHTWLPDA-MEGPTPVSAL---IHAATmvtaGVYLVARMS-PLFELS-PEALLFVAIVGAVTALFAAFIGL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSS---IGHM-------GYillaaaaatplalVGAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLN 360
Cdd:PRK06590 301 VQTDIKRVLAYSTmsqLGYMflalgvgAY-------------AAAIFHLMTHAFFKALLFLGAGsVIHAMHHEQDIRKMG 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 361 GLMSPIrglPLVSALLVLGGMASSGIPGLTGF-----IAEFISFQGSFSSFpistILCVVASGLTAVYFVILLNRTCFGK 435
Cdd:PRK06590 368 GLRKKM---PVTYATFLIGTLALIGIPPFAGFfskdeILEAAFANGHINLF----VAGLVGAFLTAFYSFRLIFLVFHGK 440
|
490 500 510
....*....|....*....|....*....|...
gi 2004377957 436 LQNNLAYY---PKVLWNekfPALILAFLIIFLG 465
Cdd:PRK06590 441 EKEKIHHPhesPAVMTL---PLIVLAVLSVFAG 470
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
159-311 |
2.61e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.84 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILatfLGMVWL----GGSHSFAFDTVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYV 234
Cdd:PRK02504 162 AALKYLLIGAASSAIFL---YGSSLLyglsGGSTQLSAIALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPDVYE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 235 EASAPIAILLGgILAKLGTYGL-LRFGLGMFP---QTWHIIAPTLAIwgaISAIYGAVVAITQKDIKRMVAYSSIGHMGY 310
Cdd:PRK02504 239 GSPTPVVAFLS-VGSKAAGFALaIRLLVTAFPsfdEQWKLLFTALAI---LSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
.
gi 2004377957 311 I 311
Cdd:PRK02504 315 V 315
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
145-466 |
7.11e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 64.59 E-value: 7.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 145 YLLISIWGGKNRA-YAGMKFLIYTAISGALILatfLGMVWLGGSHSFAfdTVATANISAGMQLILLAGIVLGFGIKIPLI 223
Cdd:MTH00211 147 FLLISWWYGRSDAnTAALQAVIYNRIGDIGLL---LSMVWLLLNLNSW--EISQLFILNLDLTLFLLGLLLAAMGKSAQF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 224 PFHTWLPDAyVEASAPIAILL-GGILAKLGTYGLLRFgLGMFPQTWHIIAPTLAIwGAISAIYGAVVAITQKDIKRMVAY 302
Cdd:MTH00211 222 GFHPWLPSA-MEGPTPVSALLhSSTMVVAGVFLLIRL-SPLFQNNQLILGAVLLL-GALTMLFGALCALTQNDIKKIVAF 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 303 SSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVGV-IETKVGTRELDKLNGLMSpirGLPLVSALLVLGGM 381
Cdd:MTH00211 299 STTSQLGLMMVTLGLNQPQL---AFLHICTHAFFKAMLFMCSGSiIHGLNNEQDIRKMGGLSK---NLPFTSSCLFLGSL 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 382 ASSGIPGLTGF-----IAEFISfqGSFSSFpISTILCVVASGLTAVYFVILLnrtcFGKLQNNLAYYPKVLWNEKFPALI 456
Cdd:MTH00211 373 ALMGFPFLSGFfskdlILESMN--GSYLNA-WALLLTLLATSLTAAYSFRLI----FLSLGGYPRFLSLSPINENYKLLK 445
|
330
....*....|
gi 2004377957 457 LAFLIIFLGV 466
Cdd:MTH00211 446 NPLKRLALGS 455
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
81-412 |
7.14e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 64.43 E-value: 7.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 81 LSILMLVLNSFLTWIAIYSSSKDTERpRLFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWggKNRAYAG 160
Cdd:PRK06459 46 LSFFSIISTIVWILASLYSIEYDHYG-KWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNKRPA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 161 MKFLIYTAISGALILATFLGMVWLGGSHSFAFdtvatanISAGMQLILLAgivLGFGIKIPLIPFH--TWLPDAYVEASA 238
Cdd:PRK06459 123 FVFMAFGELSTVLILAGFAWAFIISGTTNFSY-------LPSPVPLILAS---FGFIIKMGMMPFLvsEWLPIAHGNAPS 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 PIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAA 318
Cdd:PRK06459 193 NFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLY 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 319 TPLALVGAVAQMF----------SHGIILAILFHLVGVIETKVGTRELDKLNGLMspirglplvSALLVLGGMASSGIPG 388
Cdd:PRK06459 273 MVTKQLITSIEHFslitvilysfAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWI---------ELGLTLLASSLSGLLP 343
|
330 340
....*....|....*....|....
gi 2004377957 389 LTGFIAEFISFQGSFSSFPISTIL 412
Cdd:PRK06459 344 NIGGVASWLLLESLFMFAYVLHNV 367
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
64-475 |
1.61e-10 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 63.39 E-value: 1.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 64 LPWNET--LGLSYHLGVDGLSILMLVLNSFLTWIA-IYS---SSKDTERPRlFYSLILFITGGVAGAFLSQNLLLFFLFY 137
Cdd:PRK07390 71 FPWLQVadLDLSLSLEISPVTLGALELITGLSLLAqIYAlgyLEKDWGLAR-FFALLGFFEAAMSGLALSDSLFFSYVLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 138 ELELIPFYLLISIWGGKNRAYAGMKFLIYTAISGALILatFLGMVWL---GGSHSFA--FDTVATANISAGMQLILLAGI 212
Cdd:PRK07390 150 EILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLL--LMGVVALsplAGTLNFSdlAAWAATANLDPLTATLLGLAL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 213 VLGFGIKIPLIPFHTWLPDAyVEASAPIAILLGGILAKLGTYGLLRFglgmfpQTWHIIAP----TLAIWGAISAIYGAV 288
Cdd:PRK07390 228 IAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKL------QPVLALSPvaltVLIVIGTVTAIGASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 289 VAITQKDIKRMVAYSSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSPirg 368
Cdd:PRK07390 301 VAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDI---ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSR--- 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 369 LPLVSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVLW 448
Cdd:PRK07390 375 MPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKPQQKTRRSPEVLW 454
|
410 420
....*....|....*....|....*..
gi 2004377957 449 NEKFPALILAFLIIFLgvqPTWLVRWS 475
Cdd:PRK07390 455 PMALPMVILAGFTLHL---PLLLQQWG 478
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
159-471 |
5.12e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 61.57 E-value: 5.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILATFLGMVWLGGSHSF-AFDTVATANISAGMQLILLAgivlgfgIKIPLIPFHTWLPDAYvEAS 237
Cdd:MTH00199 149 AGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqGINSILTGDVGKILITISLL-------FKLSAAPFHMWAPDVY-EGA 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 238 APIAILLGGILAKLGTYGLLrfgLGMFPQTWHIIaptlaIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAA 317
Cdd:MTH00199 221 PTITTALLATVPKIGVFSIL---VQIGPVTNVVL-----ICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAI 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 318 ATPLALVGAVAQMFSHGIILAILFHLvgVIETKVGTRELDKLNGLMspiRGLPLVSALLVLGGMASSGIPGLTGFIAE-F 396
Cdd:MTH00199 293 GSFESIQASLIYMIIYVIMSICSFSI--ILSLKLTKGLIVEVSGLS---RKNPVIALTLALTFLSIAGIPPLAGFLSKwL 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 397 ISFQGSFSSFPISTILCVVASGLTAVYFVILLNRTCFgKLQNNLAYYPKVLWNEK----FPALIL---AFLIIFLGVQPT 469
Cdd:MTH00199 368 ILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIYF-QADYSILIWQKVLKKEErldlSKSILIgvtFFIILFLMISPN 446
|
..
gi 2004377957 470 WL 471
Cdd:MTH00199 447 FL 448
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-465 |
7.15e-10 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 61.25 E-value: 7.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAKdIPANRIRLASLTVTGLVLLWNMFILLKFDINNpgmQFTEYLPWN----ETLGLSYHL 76
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRK-IGEKGAGILTSSCLIISLSWSFLIFYEILFNS---STTYIKLWRwldsDLLTVYFGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 77 GVDGLSILML-VLNSFLTWIAIYSSS---KDTERPRLFYSLILFiTGGVAGAFLSQNLLLFFLFYELELIPFYLLISIWG 152
Cdd:MTH00020 77 QFDGLVAIMLlVVTTVSTLVHIFSTAymrGDPHIPRFMSYLSLF-TFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 153 GKNRA-YAGMKFLIYTAISG-ALILATFLgmVW-LGGSHSFA--FDTVATANiSAGMQLILLAgIVLGFGIKIPLIPFHT 227
Cdd:MTH00020 156 TRIEAnKAAIKAMLVNRVGDiGLLLAMFL--LWdRFGSLDFSsvFNMVVSAP-SSDITLICLF-LFIGAVGKSAQLGLHT 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 228 WLPDAyVEASAPIAILL-GGILAKLGTYGLLRFGlGMFPQTwHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIG 306
Cdd:MTH00020 232 WLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSS-PLFEQA-PLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 307 HMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLNGLmspIRGLPLVSALLVLGGMASSG 385
Cdd:MTH00020 309 QLGYMVVACGLSHYSI---SLFHLMNHAFFKALLFLSAGsVIHALSDEQDMRKMGGL---ISFLPLTYIFFLIGSLSLMG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 386 IPGLTGFIAEFISFQGSFSSFPISTI--LCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVL---WNEKFPALILAFL 460
Cdd:MTH00020 383 FPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHegdWNLLLPLGILALG 462
|
....*
gi 2004377957 461 IIFLG 465
Cdd:MTH00020 463 SIFVG 467
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
142-424 |
3.49e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 58.36 E-value: 3.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 142 IPFYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGShsfafdtvatanisagmqLILLAGIVLGFGIKIP 221
Cdd:MTH00144 38 IGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFS------------------WFSMSLLLLGLCLKLG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 222 LIPFHTWLPDAYVEASAPIAILLGGILaKLGTYGLLRFGLGMFPQTWHIIaptlaIWGAISAIYGAVVAITQKDIKRMVA 301
Cdd:MTH00144 100 LFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLYWLAYLLC-----VISVLSALVGSIGGLNQTQVRALLA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 302 YSSIGHMGYILLAAAAATPLAlvgaVAQMFSHGIILAILFHLVGVIETKvgtRELDKLNGLMSPIRGLPLVSALLVLGGM 381
Cdd:MTH00144 174 YSSISHTGWMLVAILHGSWLM----WMYFLIYIVSSGFLFFSLWSGDSG---SMKDLGSLKPSYKTGLSIISLLLSLGGL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2004377957 382 assgiPGLTGFIAEFISFQGSFSSFPISTILCVVASGLTAVYF 424
Cdd:MTH00144 247 -----PPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFF 284
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
76-310 |
3.78e-08 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 55.86 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 76 LGVDGLSILMLVLNSFLTWIAIYSSSK----DTERPRlFYSLILFITGGVAGAFLSQNLLLFFLFYELELIPFYLLISIW 151
Cdd:PRK08168 65 LEVSGLGLVMAALVQLLGWVIGRFSHRylqgEPGQRR-YVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 152 GGKNRA-YAGMKFLIYTAISGALILATFLGMVWLGGSHSFA--FDTVATANISAGMQLILLAgIVLGFGIKIPLIPFHTW 228
Cdd:PRK08168 144 PDRPFArLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSalWAHLAAQGASPSLQAAALL-LVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 229 LPDAyVEASAPIAILLGGILAKLGTYGLLRFGlgmfpQTWHIIAPT---LAIWGAISAIYGAVVAITQKDIKRMVAYSSI 305
Cdd:PRK08168 223 LIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA-----PLLEQAPPArwlLVLVGLATAVLAGLVMLTRISIKVRLAWSTV 296
|
....*
gi 2004377957 306 GHMGY 310
Cdd:PRK08168 297 AQMGF 301
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
212-414 |
4.21e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 55.31 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 212 IVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIaptlAIWGAISAIYGAVVAI 291
Cdd:MTH00062 171 LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGY----LFLCCLFSVFFLITAC 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGAVAQMFSHGIILAILFHLVGVIETKVGTREldkLNGLMSPIRGLPL 371
Cdd:MTH00062 247 SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRN---WVLLKSGINGSLV 323
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2004377957 372 VSALLVLGGMASSGIPGLTGFIAEFISFQGSFSSFPISTILCV 414
Cdd:MTH00062 324 LRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCF 366
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-465 |
8.06e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 55.01 E-value: 8.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 1 MLSVLIWLPIIAAIIIGFYPAK-DIPANRIRLASLTVTGLVLLWNMFillkFDIN-NPGMQFTEYLPW--NETLGLSYHL 76
Cdd:MTH00210 1 MYILVLFLPLLSAIISGLFGRKiGTKGAGILTSSCIVISAIVSCCIF----YETTlNGSATYIKLWRWfdSELLTTYFGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 77 GVDGLSILML-VLNSFLTWIAIYSS---SKDTERPRLFYSLILFitggvagAFL------SQNLLLFFLFYELELIPFYL 146
Cdd:MTH00210 77 QFDSLTSTMLiVITSVSALVHIYSTgymSGDPHIPRFMSYLSLF-------TFLmivlvtSDNYVQLFIGWEGVGLCSYL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 147 LISIWGGKNRA-YAGMK-FLIYTAISGALILATFLGMVWLGgshSFAFDTVATA-NISAGMQLILLAGIVLGFGI--KIP 221
Cdd:MTH00210 150 LINFWLTRIKAnKAAIKaMLINRVGDIGLVLAMIMILKEFG---TLEFSTISSLlVTNINKESLTIICLLLFIGAvgKSA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 222 LIPFHTWLPDAyVEASAPIAILL-GGILAKLGTYGLLRFGlgMFPQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMV 300
Cdd:MTH00210 227 QLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIIRSG--PLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVI 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 301 AYSSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLNGLmspIRGLPLVSALLVLG 379
Cdd:MTH00210 304 AYSTCSQLGYMVMVCGISNYST---SLFHLMNHAFFKALLFLSAGsVIHAVSDEQDMRKMGGL---IKSIPFTYVMILIG 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 380 GMASSGIPGLTGFIAEFISFQGSFSSFPISTI--LCVVASGLTAVYFVILLNRTCFGKLQNNLAYYPKVL---WNEKFPA 454
Cdd:MTH00210 378 SLSLMGFPYLTGFYSKDLILELTYDKYYIAFAywLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHessWNITFPL 457
|
490
....*....|.
gi 2004377957 455 LILAFLIIFLG 465
Cdd:MTH00210 458 LLLAFGSIFVG 468
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
212-466 |
1.71e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 53.58 E-value: 1.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 212 IVLGFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGmfpqtwhiiAPTLAIWGAISAIYGAVVAI 291
Cdd:PRK12664 150 FMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSG---------EEILLFLGIITAIYGIIFAS 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 292 TQKDIKRMVAYSSIGHMGYILLAAAAATPLALVGA--VAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMS-PIRG 368
Cdd:PRK12664 221 LEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGilILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKmSLEA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 369 LPLVSALLVLGGMassgiPGLTGFIAEFI----------SFQGSFSSFPISTILCVVASGLTAVYFVillnrtcFGKLQN 438
Cdd:PRK12664 301 MCCIIAILNMGAF-----PGTAGFVSKSLithsidtaglTLVLYKKLFLICSLLLFASVGLKFFWYA-------FISKSK 368
|
250 260
....*....|....*....|....*...
gi 2004377957 439 NLAYYPKVLWNEKFPALILAFLIIFLGV 466
Cdd:PRK12664 369 SKPEAEKVYIGSKLSMIILVLICVVLGM 396
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
199-423 |
4.82e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 52.28 E-value: 4.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 199 NISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAyVEASAPI-AILLGGILAKLGTYGLLRFGLGMFPQTWhiIAPTLAI 277
Cdd:MTH00208 229 NSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVsALLHSSTMVVAGVFLLIRTSPLISNSPW--FLSLCLI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 278 WGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVG-VIETKVGTREL 356
Cdd:MTH00208 306 LGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFLCSGsIIHSLNNEQDL 382
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2004377957 357 DKLNGLMSPirgLPLVSALLVLGGMASSGIPGLTGF-----IAEFIsfQGSFSSFpISTILCVVASGLTAVY 423
Cdd:MTH00208 383 RKMGGLSFL---LPVTSSCIILGSLALMGTPFLAGFyskdlILEAG--LASISNL-LSIILALIATLLTAVY 448
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
159-425 |
8.63e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 51.40 E-value: 8.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALIL---ATFLGMVWLGGSHSFAFD-TVATANISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDAYV 234
Cdd:MTH00198 248 SGLKYWILGAMSSGFYLfgcALYFGFTGNEGMLGTILSaTLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 235 EASAPIAILLGgILAKLGTYGLLrfglgmfpqTWHIIAPTLAIWGAI-SAIYGAVVAITQKDIKRMVAYSSIGHMGYILL 313
Cdd:MTH00198 328 GAPTPTTALIA-IIPKFTVYILL---------TSLVITSKLLLSVAIiSLVVGAFGALNQTRIKRLLAYSGIGHIGFILI 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 314 AAAAATPLALVGAVAQMFSHGIILAILFHLVGVIET----KVGTRELDKLNGLMSPI----------RGLPLVSALLVLG 379
Cdd:MTH00198 398 GVSAGTYESLQASWTYAVTYLVSALASFTVICTLEEfgtrTPTSRQRDGSFGNYNLVrrlvdltilsRGQPYIAFSLAIV 477
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2004377957 380 GMASSGIPGLTGFIAEF--------ISFQGSFSSFPISTILCVVASGLTAVYFV 425
Cdd:MTH00198 478 FLSLAGIPPLLGFLGKWfilvgsikIAFSSSLSIYYLVALFAIICTCISAFYYI 531
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
144-425 |
1.08e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.74 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 144 FYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSfafdtvatanISAGMQLILLAGIVLGFGIKIPLI 223
Cdd:MTH00200 40 IIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWG----------ISEMLGPLSETLILLALALKLGLA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 224 PFHTWLPDAYVEASAPIAILLGGIlAKLGTYGLLRFGLgmfpqtWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYS 303
Cdd:MTH00200 110 PGHFWVPDVLQGLSLQTGLILSTW-QKLAPFALLIQLA------PALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYS 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 304 SIGHMGYILLAAAAATPLALVGAVAQMFSHGIILaILFHLVGVIetkvgtreldKLNGLMSPIRGLPLVSALLVLGGMAS 383
Cdd:MTH00200 183 SIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVF-LLLNLLNST----------KINSLSSSKTKNPILSMLLGLTLLSL 251
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2004377957 384 SGIPGLTGFIAEFISFQGSFS-SFPISTILCVVASGLTAVYFV 425
Cdd:MTH00200 252 GGLPPLTGFFPKWLILQELSKqGLFIYATILLLGSLLSLFFYL 294
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
159-424 |
1.90e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 49.93 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILATFLGMVWLGGSHSfafdtvatanISAGMQLILLAGIVLGFGIKIPLIPFHTWLPDayveasa 238
Cdd:MTH00041 55 ATIKYFLVQAFSAAILLNGALIQAWLSGSWS----------INGPLNTLSSIIITLALALKLGLAPCHFWFPD------- 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 piaILLGgilaklgtyglLRFGLGMFPQTWHIIAPT--------------LAIWGAISAIYGAVVAITQKDIKRMVAYSS 304
Cdd:MTH00041 118 ---VLQG-----------LPFLQGLIIATWQKIAPLillisisnllnsniLILCGILSVLVGGWGGLNQTQTRKILAFSS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 305 IGHMGYILLAAAAATPLALVgavaqMFSHGIILAILFHLVGVIETKVGTRELDKLNGlMSPIRGLPLVSALLVLGGMass 384
Cdd:MTH00041 184 IAHLGWIIITSAYSPNASII-----MFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQ-LNPISAFLFILSILSLGGL--- 254
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2004377957 385 giPGLTGFIAEFISFQG-SFSSFPISTILCVVASgLTAVYF 424
Cdd:MTH00041 255 --PPLTGFLNKFISLYClIQNNSILISIILIIGS-LLSLFF 292
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
145-471 |
4.89e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 49.26 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 145 YLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFafdtvaTANISAGMQLILLAGIVLGFGIKIPLIP 224
Cdd:MTH00209 120 YLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIF------YLNFNSNLGSVISVLIVLAAMTKSAQIP 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 225 FHTWLPdAYVEASAPIAILL-GGILAKLGTYGLLRF--GLGMFPQTWHIIaptlAIWGAISAIYGAVVAITQKDIKRMVA 301
Cdd:MTH00209 194 FSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFfpSLFSSPFFSMSL----LLLGSLTTLMASMSANVESDLKKIIA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 302 YSSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVGVIETKVGTRELDKLNGLMSpiRGLPLVSALLVLGGM 381
Cdd:MTH00209 269 LSTLSQLGLMMCSLGLNQPEL---AFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLW--YQMPITSICLNIANL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 382 ASSGIPGLTGFIAEFISFQGSF-SSFPIST-ILCVVASGLTAVYFVILLNRTCFGKL-QNNLAYYPKVLWNEKFPALILA 458
Cdd:MTH00209 344 SLCGIPFLAGFYSKDLILESMLeSNMPIMTlILMFLSTSLTAAYSMRLSYFSLWGPNsSKSLNSSFDQNKLNLKPMLVLT 423
|
330
....*....|...
gi 2004377957 459 FLIIFLGVQPTWL 471
Cdd:MTH00209 424 LGSITGGSVMSWV 436
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
224-311 |
1.05e-05 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 48.35 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 224 PFHTWLPDAyVEASAPIAILL-------GGI--LAKLgtygllrFGL-GMFPQTWHIIAPTlaiwGAISAIYGAVVAITQ 293
Cdd:CHL00025 245 PLHVWLPDA-MEGPTPISALIhaatmvaAGIflVARL-------LPLfIVIPYIMNLISLI----GIITALLGATLALAQ 312
|
90
....*....|....*...
gi 2004377957 294 KDIKRMVAYSSIGHMGYI 311
Cdd:CHL00025 313 KDIKRGLAYSTMSQLGYM 330
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-311 |
1.95e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 43.62 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 66 WNETLGLSYHLGVDGLSI---------LMLVLNSFLTWIAIYSSSKDTeRPRLFYSLILFITGGVAGAFLSQNLLLFFLF 136
Cdd:PRK06591 65 WTSKIGIEYRLNSLNQAIivylnlvllFFLVFCHKITNQTILKYINNN-RKSLFYGILLFAHTGYLGMIATNDFFNLYVF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 137 YELELIPFYLLISIWGGKNRAYAGMKFLIYTAISGALILATFLGMVWLGGSHSFAfDTVATANISAGMQLILLA--GIVL 214
Cdd:PRK06591 144 IEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMT-DIAAYLQEHTNSRIITIAigFFLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 215 GFGIKIPLIPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWHIIAPTLAI--WGAISAIYGAVVAIT 292
Cdd:PRK06591 223 GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITNFIrpIALATLIIAPYFAYQ 302
|
250
....*....|....*....
gi 2004377957 293 QKDIKRMVAYSSIGHMGYI 311
Cdd:PRK06591 303 AKNFKNIIIYSCFTQIGYV 321
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
223-470 |
7.97e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.06 E-value: 7.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 223 IPFHTWLPDAYVEASAPIAILLGGILAKLGTYGLLRFGLGMFPQTWhiIAPTLAIWGAISAIYGAVVAITQKDIKRMVAY 302
Cdd:MTH00207 196 MPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYW--FNPALLLTASLTMLMAGLSAMTECDMKKIIAL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 303 SSIGHMGYILLAAAAATPLAlvgAVAQMFSHGIILAILFHLVG-VIETKVGTRELDKLNGLMSPirgLPLVSALLVLGGM 381
Cdd:MTH00207 274 STLSQLGVMMASLGLGMPKL---ALFHLITHALFKALLFVCAGsLIHSHHHSQDLRTMGNLTNQ---MPLTTSCLLIANL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 382 ASSGIPGLTGFIA-EFISFQGSFSSFPISTILCV-VASGLTAVYFVILLNRTCFGKLQNN-LAYYPKVLWNEKFPALILA 458
Cdd:MTH00207 348 ALCGSPFLSGFYSkDLILESSLFYPHNSLMILMIfLATALTAAYSTRFTLAVLWSPNSSSpYHHLEDEDKSLTTPMLLLT 427
|
250
....*....|..
gi 2004377957 459 FLIIFLGVQPTW 470
Cdd:MTH00207 428 LGAITSGSALNW 439
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
159-424 |
1.96e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILatfLGMVWLGGSHSFAFDTvatanisagMQLILLAGIVLgfgiKIPLIPFHTWLPDAYVEASA 238
Cdd:MTH00011 57 AAVKYFLAQALGSGLLL---LGMTMMWSFPSLLKNI---------TALMLLVSLML----KLGMAPCHFWFPSVMSSISW 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 239 PIAILLGGiLAKLGTYGLLRFglgmfpQTWHIIAPTLAIWGAISAIYGAVVAITQKDIKRMVAYSSIGHMGYILLAAAAA 318
Cdd:MTH00011 121 TLCLILST-WQKIAPLSILFF------FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFS 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 319 TPLalvgAVAQMFSHGIILAILFHLVGVIETKvGTRELDKLNGlMSPIRGLPLVSALLVLGGMassgiPGLTGFIAEFIS 398
Cdd:MTH00011 194 PSM----AILYFMTYIIITTPLMLLFAYLNAF-STKFNSKISS-MSQTTSMSLFIMLLSLGGL-----PPFTGFMPKLMA 262
|
250 260
....*....|....*....|....*.
gi 2004377957 399 FQGSFSSFPISTILCVVASGLTAVYF 424
Cdd:MTH00011 263 IETLTSNSMILILLVLIVGSLMNLFY 288
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
159-311 |
9.96e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 38.36 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2004377957 159 AGMKFLIYTAISGALILATFLGMVWLGGSHSFafdTVATANISAGMQLILLAgivlgfgIKIPLIPFHTWLPDAYveasA 238
Cdd:MTH00070 55 AATKYFLTQASASALILFSSTINAWFTGEWTI---MNMQTPLPTIMLTIALM-------MKLGIAPFHFWLPEVL----Q 120
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2004377957 239 PIAILLGGILA---KLGTYGLLRfglgmfpQTWHIIAPTLAIW-GAISAIYGAVVAITQKDIKRMVAYSSIGHMGYI 311
Cdd:MTH00070 121 GLDLTTGLILStwqKLAPMALLI-------QISHLLNSNLLIImGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWM 190
|
|
| |
