NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2001526075|emb|CAF6746146|]
View 

unnamed protein product, partial [Phaeocystis rex RA-2015b]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
37-126 8.56e-18

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


:

Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 78.13  E-value: 8.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  37 IFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIQ----SAHNYE 112
Cdd:pfam00394  51 TLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDG-VYVNPFTVDSLDIFPGQRYSVLVTANQDPGnywiVASPNI 129
                          90
                  ....*....|....
gi 2001526075 113 TNAVNTLNAQNLTY 126
Cdd:pfam00394 130 PAFDNGTAAAILRY 143
ascorbOXfungal super family cl31343
L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, ...
34-214 2.21e-16

L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.


The actual alignment was detected with superfamily member TIGR03390:

Pssm-ID: 132431 [Multi-domain]  Cd Length: 538  Bit Score: 78.73  E-value: 2.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  34 KREIFRLQQGKTYLVRILNAASLAFYNIAIASH-YFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLhynppiqsahnyE 112
Cdd:TIGR03390 196 MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHeNLTIIEADG-SYTKPAKIDHLQLGGGQRYSVLF------------K 262
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075 113 TNAVNTLNAQN-LTYVMQVQTdwrgDDRTNAGISYAYVTYDENTDVIDTSLTDISPISPLNESRDWQEwYTLLQAIELPl 191
Cdd:TIGR03390 263 AKTEDELCGGDkRQYFIQFET----RDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLE-YELEPLSEEN- 336
                         170       180
                  ....*....|....*....|...
gi 2001526075 192 lsgVPLCPSSNEVTKSFTLHVKQ 214
Cdd:TIGR03390 337 ---NQDFPTLDEVTRRVVIDAHQ 356
 
Name Accession Description Interval E-value
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
37-126 8.56e-18

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 78.13  E-value: 8.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  37 IFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIQ----SAHNYE 112
Cdd:pfam00394  51 TLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDG-VYVNPFTVDSLDIFPGQRYSVLVTANQDPGnywiVASPNI 129
                          90
                  ....*....|....
gi 2001526075 113 TNAVNTLNAQNLTY 126
Cdd:pfam00394 130 PAFDNGTAAAILRY 143
CuRO_2_LCC_like cd04205
Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
33-151 3.34e-17

Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259868 [Multi-domain]  Cd Length: 152  Bit Score: 76.63  E-value: 3.34e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  33 GKREIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLhynppiqsahnye 112
Cdd:cd04205    53 CPLPVITVEPGKTYRLRLINAGSFASFNFAIDGHNMTVIEVDG-GYVEPLEVDNLDLAPGQRYDVLV------------- 118
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2001526075 113 tnavnTLNAQNLTYVMQVQTDWRGDDRTNAGISYAYVTY 151
Cdd:cd04205   119 -----KADQPPGNYWIRASADGRTFDEGGNPNGTAILRY 152
ascorbOXfungal TIGR03390
L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, ...
34-214 2.21e-16

L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.


Pssm-ID: 132431 [Multi-domain]  Cd Length: 538  Bit Score: 78.73  E-value: 2.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  34 KREIFRLQQGKTYLVRILNAASLAFYNIAIASH-YFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLhynppiqsahnyE 112
Cdd:TIGR03390 196 MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHeNLTIIEADG-SYTKPAKIDHLQLGGGQRYSVLF------------K 262
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075 113 TNAVNTLNAQN-LTYVMQVQTdwrgDDRTNAGISYAYVTYDENTDVIDTSLTDISPISPLNESRDWQEwYTLLQAIELPl 191
Cdd:TIGR03390 263 AKTEDELCGGDkRQYFIQFET----RDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLE-YELEPLSEEN- 336
                         170       180
                  ....*....|....*....|...
gi 2001526075 192 lsgVPLCPSSNEVTKSFTLHVKQ 214
Cdd:TIGR03390 337 ---NQDFPTLDEVTRRVVIDAHQ 356
PLN02191 PLN02191
L-ascorbate oxidase
19-257 2.32e-09

L-ascorbate oxidase


Pssm-ID: 177843 [Multi-domain]  Cd Length: 574  Bit Score: 57.72  E-value: 2.32e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  19 YNDGTQSSISTYCKGKR---EIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRY 95
Cdd:PLN02191  206 FSNGTELPMCTFKEGDQcapQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADG-NYITPFTTDDIDIYSGESY 284
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  96 MALLhynppiqsahnyetnAVNTLNAQNltYVMQVQTDWRGDDRTNAGISYAYVTYDENTdvidtsltdiSPISPlnesr 175
Cdd:PLN02191  285 SVLL---------------TTDQDPSQN--YYISVGVRGRKPNTTQALTILNYVTAPASK----------LPSSP----- 332
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075 176 dwqewytllqaielPllsgvPLCPSSNEVTKSFTLHVKqqmidISSGKGL-TPPASSG------NSDGVQLGWTVY--NN 246
Cdd:PLN02191  333 --------------P-----PVTPRWDDFERSKNFSKK-----IFSAMGSpSPPKKYRkrlillNTQNLIDGYTKWaiNN 388
                         250
                  ....*....|.
gi 2001526075 247 SRLMMPTTPYL 257
Cdd:PLN02191  389 VSLVTPATPYL 399
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
34-129 8.17e-08

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 52.82  E-value: 8.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  34 KREIFRL--QQGKTYLVRILNAA---SLAFyniAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIQ-- 106
Cdd:TIGR03389 183 SKDTFKLtvEPGKTYLLRIINAAlndELFF---AIANHTLTVVEVDA-TYTKPFKTKTIVIGPGQTTNVLLTADQSPGry 258
                          90       100
                  ....*....|....*....|....*
gi 2001526075 107 --SAHNYeTNAVNTLNAQNLTYVMQ 129
Cdd:TIGR03389 259 fmAARPY-MDAPGAFDNTTTTAILQ 282
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
38-95 2.91e-06

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 48.01  E-value: 2.91e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2001526075  38 FRLQQGKTYLVRILNAASLAFYNIAIAS-HYFTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:COG2132   186 LEVRPGERVRLRLLNASNARIYRLALSDgRPFTVIATDGGLLPAPVEVDELLLAPGERA 244
PLN02835 PLN02835
oxidoreductase
38-125 5.77e-03

oxidoreductase


Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 38.03  E-value: 5.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  38 FRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNppiQSAHNYETNAVN 117
Cdd:PLN02835  204 FSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEG-SHTIQNIYDSLDVHVGQSVAVLVTLN---QSPKDYYIVAST 279

                  ....*...
gi 2001526075 118 TLNAQNLT 125
Cdd:PLN02835  280 RFTRQILT 287
 
Name Accession Description Interval E-value
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
37-126 8.56e-18

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 78.13  E-value: 8.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  37 IFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIQ----SAHNYE 112
Cdd:pfam00394  51 TLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDG-VYVNPFTVDSLDIFPGQRYSVLVTANQDPGnywiVASPNI 129
                          90
                  ....*....|....
gi 2001526075 113 TNAVNTLNAQNLTY 126
Cdd:pfam00394 130 PAFDNGTAAAILRY 143
CuRO_2_LCC_like cd04205
Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
33-151 3.34e-17

Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259868 [Multi-domain]  Cd Length: 152  Bit Score: 76.63  E-value: 3.34e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  33 GKREIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLhynppiqsahnye 112
Cdd:cd04205    53 CPLPVITVEPGKTYRLRLINAGSFASFNFAIDGHNMTVIEVDG-GYVEPLEVDNLDLAPGQRYDVLV------------- 118
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2001526075 113 tnavnTLNAQNLTYVMQVQTDWRGDDRTNAGISYAYVTY 151
Cdd:cd04205   119 -----KADQPPGNYWIRASADGRTFDEGGNPNGTAILRY 152
ascorbOXfungal TIGR03390
L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, ...
34-214 2.21e-16

L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.


Pssm-ID: 132431 [Multi-domain]  Cd Length: 538  Bit Score: 78.73  E-value: 2.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  34 KREIFRLQQGKTYLVRILNAASLAFYNIAIASH-YFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLhynppiqsahnyE 112
Cdd:TIGR03390 196 MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHeNLTIIEADG-SYTKPAKIDHLQLGGGQRYSVLF------------K 262
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075 113 TNAVNTLNAQN-LTYVMQVQTdwrgDDRTNAGISYAYVTYDENTDVIDTSLTDISPISPLNESRDWQEwYTLLQAIELPl 191
Cdd:TIGR03390 263 AKTEDELCGGDkRQYFIQFET----RDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLE-YELEPLSEEN- 336
                         170       180
                  ....*....|....*....|...
gi 2001526075 192 lsgVPLCPSSNEVTKSFTLHVKQ 214
Cdd:TIGR03390 337 ---NQDFPTLDEVTRRVVIDAHQ 356
CuRO_2_MCO_like_1 cd13886
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
19-104 2.45e-14

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This family of MCOs is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259953 [Multi-domain]  Cd Length: 163  Bit Score: 68.84  E-value: 2.45e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  19 YNDGTQSSISTYCKGKREIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMAL 98
Cdd:cd13886    45 CASATYKIYCCASNGTYYNFTLEPNKTYRLRLINAGSFADFTFSVDGHPLTVIEADG-TLVEPVEVHSITISVAQRYSVI 123

                  ....*.
gi 2001526075  99 LHYNPP 104
Cdd:cd13886   124 LTTNQP 129
CuRO_2_AAO_like_2 cd13873
The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant ...
36-146 3.37e-13

The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant laccases similar to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259941 [Multi-domain]  Cd Length: 161  Bit Score: 65.77  E-value: 3.37e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  36 EIFRLQQGKTYLVRILNAASLAFYNIAIASHY-FTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHynppIQSAHNYETN 114
Cdd:cd13873    61 PVIDVEPGKTYRFRFIGATALSFVSLGIEGHDnLTIIEADG-SYTKPAETDHLQLGSGQRYSFLLK----TKSLEELAAL 135
                          90       100       110
                  ....*....|....*....|....*....|...
gi 2001526075 115 AVNtlnaqnlTYVMQVQTDWR-GDDRTNAGISY 146
Cdd:cd13873   136 NKT-------TFWIQIETRWRpTNDTGYAVLRY 161
CuRO_2_Tv-LCC_like cd13882
The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; ...
19-115 6.98e-13

The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259949 [Multi-domain]  Cd Length: 159  Bit Score: 65.12  E-value: 6.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  19 YNDGTQSSISTyckgkreiFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGRSfTEPVDVNSIDLSSGQRYMAL 98
Cdd:cd13882    38 FDGGPTSPLAV--------INVKRGKRYRFRVINISCIPSFTFSIDGHNLTVIEADGVE-TKPLTVDSVQIYAGQRYSVV 108
                          90
                  ....*....|....*..
gi 2001526075  99 LHYNppiQSAHNYETNA 115
Cdd:cd13882   109 VEAN---QPVDNYWIRA 122
CuRO_2_Fet3p_like cd13877
The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
43-100 1.68e-10

The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) with the four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the extracellular space and the carboxyl terminus in the cytoplasm. The periplasmic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259945 [Multi-domain]  Cd Length: 148  Bit Score: 57.95  E-value: 1.68e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2001526075  43 GKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLH 100
Cdd:cd13877    53 GKTYLLRIINMGAFASQYFHIEGHDMTIIEVDG-VYVKPYPVDTLYIAVGQRYSVLVK 109
CuRO_2_tcLCC_insect_like cd13884
The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium ...
35-111 3.58e-10

The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) subfamily includes the majority of insect laccases. One member is laccase 2 from Tribolium castaneum, which is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259951 [Multi-domain]  Cd Length: 150  Bit Score: 57.24  E-value: 3.58e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2001526075  35 REIFRLQQGKTYLVRILNAASLAF-YNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIqsaHNY 111
Cdd:cd13884    54 LEVFTVEQGKRYRFRLINAGATNCpFRVSIDGHTLTVIASDG-NDVEPVEVDSIIIYPGERYDFVLNANQPI---GNY 127
PLN02191 PLN02191
L-ascorbate oxidase
19-257 2.32e-09

L-ascorbate oxidase


Pssm-ID: 177843 [Multi-domain]  Cd Length: 574  Bit Score: 57.72  E-value: 2.32e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  19 YNDGTQSSISTYCKGKR---EIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRY 95
Cdd:PLN02191  206 FSNGTELPMCTFKEGDQcapQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADG-NYITPFTTDDIDIYSGESY 284
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  96 MALLhynppiqsahnyetnAVNTLNAQNltYVMQVQTDWRGDDRTNAGISYAYVTYDENTdvidtsltdiSPISPlnesr 175
Cdd:PLN02191  285 SVLL---------------TTDQDPSQN--YYISVGVRGRKPNTTQALTILNYVTAPASK----------LPSSP----- 332
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075 176 dwqewytllqaielPllsgvPLCPSSNEVTKSFTLHVKqqmidISSGKGL-TPPASSG------NSDGVQLGWTVY--NN 246
Cdd:PLN02191  333 --------------P-----PVTPRWDDFERSKNFSKK-----IFSAMGSpSPPKKYRkrlillNTQNLIDGYTKWaiNN 388
                         250
                  ....*....|.
gi 2001526075 247 SRLMMPTTPYL 257
Cdd:PLN02191  389 VSLVTPATPYL 399
CuRO_2_LCC_plant cd13875
The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that ...
31-111 1.26e-08

The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259943 [Multi-domain]  Cd Length: 148  Bit Score: 52.60  E-value: 1.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  31 CKGKrEIFRL--QQGKTYLVRILNAA---SLAFyniAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNppi 105
Cdd:cd13875    45 CSSK-DTFVLtvEPGKTYLLRIINAAlneELFF---KIANHTLTVVAVDA-SYTKPFTTDYILIAPGQTTDVLLTAD--- 116

                  ....*.
gi 2001526075 106 QSAHNY 111
Cdd:cd13875   117 QPPGRY 122
CuRO_2_MaLCC_like cd13880
The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
21-104 1.42e-08

The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259947 [Multi-domain]  Cd Length: 167  Bit Score: 53.02  E-value: 1.42e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  21 DGTQSSISTYCKGKREIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDgrsFT--EPVDVNSIDLSSGQRYMAL 98
Cdd:cd13880    36 NGKGKFPCSTGAGSYFETTFTPGKKYRLRLINTGVDTTFRFSIDGHNLTVIAAD---FVpiVPYTTDSLNIGIGQRYDVI 112

                  ....*.
gi 2001526075  99 LHYNPP 104
Cdd:cd13880   113 VEANQD 118
CuRO_2_AAO cd13871
The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
35-102 3.01e-08

The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. MCOs couple oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259939 [Multi-domain]  Cd Length: 166  Bit Score: 52.16  E-value: 3.01e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2001526075  35 REIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGRsFTEPVDVNSIDLSSGQRYMALLHYN 102
Cdd:cd13871    71 PFILHVSPGKTYRLRIASVTALSSLNFIIEGHNLTVVEADGN-YVQPFEVSNLDIYSGETYSVLVTAD 137
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
34-129 8.17e-08

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 52.82  E-value: 8.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  34 KREIFRL--QQGKTYLVRILNAA---SLAFyniAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNPPIQ-- 106
Cdd:TIGR03389 183 SKDTFKLtvEPGKTYLLRIINAAlndELFF---AIANHTLTVVEVDA-TYTKPFKTKTIVIGPGQTTNVLLTADQSPGry 258
                          90       100
                  ....*....|....*....|....*
gi 2001526075 107 --SAHNYeTNAVNTLNAQNLTYVMQ 129
Cdd:TIGR03389 259 fmAARPY-MDAPGAFDNTTTTAILQ 282
CuRO_2_McoC_like cd13881
The second cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
49-95 1.93e-06

The second cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacterial multicopper oxidases (MCOs) represented by McoC from the pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic MCO, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with the reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. They are composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259948 [Multi-domain]  Cd Length: 142  Bit Score: 46.45  E-value: 1.93e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2001526075  49 RILNAASLAFYNIAIASHYFTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:cd13881    55 RIVNAASARYFRLALDGHKFRLIGTDGGLLEAPREVDELLLAPGERA 101
CuRO_2_CopA_like_1 cd13870
The second cupredoxin domain of CopA copper resistance protein like family; The members of ...
48-99 2.62e-06

The second cupredoxin domain of CopA copper resistance protein like family; The members of this family are copper resistance protein (CopA) homologs. CopA is multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. CopA is involved in copper resistance in bacteria. CopA mutant causes a loss of function, including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259938 [Multi-domain]  Cd Length: 117  Bit Score: 45.40  E-value: 2.62e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2001526075  48 VRILNAASLAFYNIAIASHYFTILGVDGRSfTEPVDVNSIDLSSGQRYMALL 99
Cdd:cd13870    41 LRLINAAGDTAFRVALAGHRLTVTHTDGFP-VEPVEVDALLIGMGERYDAIV 91
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
38-95 2.91e-06

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 48.01  E-value: 2.91e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2001526075  38 FRLQQGKTYLVRILNAASLAFYNIAIAS-HYFTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:COG2132   186 LEVRPGERVRLRLLNASNARIYRLALSDgRPFTVIATDGGLLPAPVEVDELLLAPGERA 244
CuRO_2_Diphenol_Ox cd13883
The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
38-99 3.71e-06

The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259950 [Multi-domain]  Cd Length: 164  Bit Score: 46.18  E-value: 3.71e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2001526075  38 FRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGRSFTEPVDVNSIDLSSGQRYMALL 99
Cdd:cd13883    65 IQVEAGKRTRFRLINAGSHAMFRFSVDNHTLNVVEADDTPVYGPTVVHRIPIHNGQRYSVII 126
CuRO_2_MCO_like_2 cd13887
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
36-94 2.21e-04

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This family of MCOs is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259954 [Multi-domain]  Cd Length: 114  Bit Score: 40.00  E-value: 2.21e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2001526075  36 EIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQR 94
Cdd:cd13887    24 EVVRVEPGGRVRLRVINGSTATNFHIDLGDLKGTLIAVDG-NPVQPVEGRRFPLATAQR 81
CuRO_2_CotA_like cd13868
The second Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat ...
46-95 4.14e-04

The second Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat component; CotA protein is an abundant component of the outer coat layer in bacterial endospore coat and it is required for spore resistance against hydrogen peroxide and UV light. Laccase is composed of three cupredoxin-like domains and includes one mononuclear and one trinuclear copper center. It is a member of the multicopper oxidase (MCO) family, which couples the oxidation of a substrate with a four-electron reduction of molecular oxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259936 [Multi-domain]  Cd Length: 155  Bit Score: 39.92  E-value: 4.14e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2001526075  46 YLVRILNAASLAFYNIAIASHY---FTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:cd13868    59 YRFRILNGSNARFYNLSLSNGDglpFWQIGTDGGFLPKPVPLDSLLIGPAERA 111
CuRO_2_Abr2_like cd13876
The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
50-104 1.49e-03

The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259944 [Multi-domain]  Cd Length: 138  Bit Score: 37.95  E-value: 1.49e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2001526075  50 ILNAASLAFYNIAIASHYFTILGVDGRsFTEPVDVNSIDLSSGQRYMALLHYNPP 104
Cdd:cd13876    59 FINAGGFHTLAFSIDEHPMWVYAVDGG-YIEPQLVDAISITNGERYSVLVKLDKP 112
CuRO_2_BOD cd13866
The second cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the ...
38-95 1.51e-03

The second cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. It is used in diagnosing jaundice through the determination of bilirubin in serum. BOD is a member of the multicopper oxidase (MCO) family that also includes laccase, ascorbate oxidase and ceruloplasmin. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259934 [Multi-domain]  Cd Length: 152  Bit Score: 38.39  E-value: 1.51e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2001526075  38 FRLQQGKtYLVRILNAASLAFYNIAIASHY------FTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:cd13866    46 LNVEPRK-YRFRLLNASVSRFFQLALVDGDnptripFTVIASDGGLLSHPVETTLLRLGMAERY 108
CuRO_2_BOD_CotA_like cd14448
Cupredoxin domain 2 of Bilirubin oxidase (BOD), the bacterial endospore coat component CotA, ...
45-95 2.58e-03

Cupredoxin domain 2 of Bilirubin oxidase (BOD), the bacterial endospore coat component CotA, and similar proteins; Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. CotA protein is an abundant component of the outer coat layer in bacterial endospore coat and is required for spore resistance against hydrogen peroxide and UV light. Also included in this subfamily are phenoxazinone synthase (PHS), which catalyzes the oxidative coupling of substituted o-aminophenols to produce phenoxazinones, and FtsP (also named SufI), which is a component of the cell division apparatus. These proteins are laccase-like multicopper oxidases (MCOs) that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259990 [Multi-domain]  Cd Length: 144  Bit Score: 37.28  E-value: 2.58e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2001526075  45 TYLVRILNAASLAFYNIAIASH-YFTILGVDGRSFTEPVDVNSIDLSSGQRY 95
Cdd:cd14448    53 WYRLRLLNASNARHYNLALSDGlPFHVIGSDGGLLEAPVKVKELVLAPAERI 104
CuRO_2_AAO_like_1 cd13872
The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate ...
36-98 3.80e-03

The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate oxidase; The proteins in this subfamily are expressed in plant pollen. They share homology to ascorbate oxidase and other members of the blue copper oxidase family. The expression of the protein is detected during germination and pollen tube growth. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It is a member of the multicopper oxidase (MCO) family that couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259940 [Multi-domain]  Cd Length: 141  Bit Score: 37.00  E-value: 3.80e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2001526075  36 EIFRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMAL 98
Cdd:cd13872    49 TSFTVEPGKTYRLRISNVGLRTSLNFRIQGHKMLLVETEG-SYTAQNTYDSLDVHVGQSYSVL 110
PLN02835 PLN02835
oxidoreductase
38-125 5.77e-03

oxidoreductase


Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 38.03  E-value: 5.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2001526075  38 FRLQQGKTYLVRILNAASLAFYNIAIASHYFTILGVDGrSFTEPVDVNSIDLSSGQRYMALLHYNppiQSAHNYETNAVN 117
Cdd:PLN02835  204 FSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEG-SHTIQNIYDSLDVHVGQSVAVLVTLN---QSPKDYYIVAST 279

                  ....*...
gi 2001526075 118 TLNAQNLT 125
Cdd:PLN02835  280 RFTRQILT 287
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH