|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
8.93e-153 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 440.74 E-value: 8.93e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWWVVQSLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASESVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 81 RHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFS 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 161 IYGFYGTLYLGMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGS 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 241 LGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 321 SYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1999119137 401 YSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVLRGDICILW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-443 |
6.29e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 326.55 E-value: 6.29e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 2 LKFAVMLMFLIPLCFLYNFWW--VVQSLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASESV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 80 YRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 160 SIYGFYGTL---YLGMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFM 236
Cdd:MTH00205 161 FLNSLNFSLsmfFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 237 MLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFA 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 317 LANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1999119137 397 YLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVLRGDICI 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
34-446 |
6.32e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 317.55 E-value: 6.32e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 34 MFMFSGSLFSLPCnLGYLFGCDILSYGLILLSFWICALMVTASESVYRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFY 113
Cdd:MTH00150 3 LLLLYSSFSSYES-LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 114 LFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGT---LYLGMLKGVEFTSLLFYLSMVMA 190
Cdd:MTH00150 82 FFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVFLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 191 FLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDL 270
Cdd:MTH00150 162 FLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 271 KALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLL 350
Cdd:MTH00150 242 KSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 351 SSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWL 430
Cdd:MTH00150 322 CIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWV 401
|
410
....*....|....*.
gi 1999119137 431 PLNMLVLRGDICILWM 446
Cdd:MTH00150 402 PLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-446 |
4.65e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 311.67 E-value: 4.65e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWWVVQSLMYLMV---FMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLlslFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 78 SVYRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 158 LFSIYGFYGTLYLGMLK---GVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSmepPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 235 FMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 315 FALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1999119137 395 TLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVLRGDICILWM 446
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
4.01e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 306.74 E-value: 4.01e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNfwwvvQSLMYLMVFMFMFSGSLFSL---------PCNLGYLFGCDILSYGLILLSFWICAL 71
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSK-----PKFLWTNTTTYSLLIALLSLqwlkppyypTKNLTQWLGIDQISAPLLVLSCWLLPL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 72 MVTASESVYRH--KYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLL 149
Cdd:MTH00124 76 MILASQNHLQHepLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 150 ASLPLLVGLFSIYGFYGTLYLGMLKGVE------FTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVL 223
Cdd:MTH00124 156 SSLPLLIAILYLHNQTGTLSLPMLQLTHptltnsWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAIL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 224 LKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTL 303
Cdd:MTH00124 236 LKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 304 MIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVM 383
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1999119137 384 LMLISFFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVL 437
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
5.58e-93 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 288.41 E-value: 5.58e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWW---VVQSLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASE 77
Cdd:MTH00044 3 TLILLSLGIAITSWIVPKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 78 SV--YRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLL 155
Cdd:MTH00044 83 NHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 156 VGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMV------MAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGY 229
Cdd:MTH00044 163 ISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifciLAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 230 GLLRVFMMLGSLGLK-MNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHG 308
Cdd:MTH00044 243 GLIRLINLFSLPSANnISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 309 LCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLIS 388
Cdd:MTH00044 323 LVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLAT 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1999119137 389 FFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVLRGDICIL 444
Cdd:MTH00044 403 VFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
5.38e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 283.35 E-value: 5.38e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWWVVQSLMYLMVFMFMFSGSLFSLPCN----LGYLFGCDILSYGLILLSFWICALMVTAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSEtmnfTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 77 ESVYRHK--YFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPL 154
Cdd:MTH00068 81 QNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 155 LVGLFSIYGFYGTLYLGMLKGV------EFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMspmqlmTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 229 YGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHG 308
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 309 LCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLIS 388
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1999119137 389 FFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVL 437
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.20e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 277.16 E-value: 1.20e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCflynfWWVVQSLMYLMVFMFMFSGSLFSLP---------CNLGYLFGCDILSYGLILLSFWICAL 71
Cdd:MTH00110 1 MLKIIIPTIMLIPLT-----WLSKNNMIWINTTTYSLLISLISLLllnqpndnsLNFSLLFFSDSLSTPLLILTTWLLPL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 72 MVTAS------ESVYRHKYFEKMFLFLVIMLLMMLyftfSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLF 145
Cdd:MTH00110 76 MLMASqhhlskEPLTRKKLYITMLILLQLFLIMTF----TATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 146 YTLLASLPLLVGLFSIYGFYGTLYLGMLK------GVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMIL 219
Cdd:MTH00110 152 YTLVGSLPLLVALLYIQNNLGSLNFLLLQlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 220 AGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMS 299
Cdd:MTH00110 232 AAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 300 TYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSV 379
Cdd:MTH00110 312 ATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNI 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1999119137 380 SMVMLMLISFFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVL 437
Cdd:MTH00110 392 TIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.13e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 269.12 E-value: 1.13e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWWVVQSLMYLMVFMFM--FSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASES 78
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLlwFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 79 VYRHKYF--EKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLV 156
Cdd:MTH00206 82 HMKNEPInrQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 157 GLFSIYGFYGTLYL---GMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR 233
Cdd:MTH00206 162 ALLFLQNSLGSLSLyilYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 234 VFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSG 313
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 314 LFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAA 393
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1999119137 394 YTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVL 437
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLIL 445
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
7.17e-82 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 259.89 E-value: 7.17e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWW-----VVQSLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 76 SESVYRHKYF--EKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLP 153
Cdd:MTH00127 81 SQNHTAPEPInrQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 154 LLVGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMV------MAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLwwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 228 GYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 308 GLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLI 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1999119137 388 SFFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLMLMLHWLPLNMLVLR 438
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILK 451
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
117-388 |
3.24e-47 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 164.02 E-value: 3.24e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 117 EASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLK------GVEFTSLLFYLSMVMA 190
Cdd:pfam00361 12 EAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltggLNSSGLLLLFLLILVG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 191 FLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDL 270
Cdd:pfam00361 92 FLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALVQTDI 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 271 KALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALA-NISYERLGSRSLLVNKGLMNFMPSMAMWWFL 349
Cdd:pfam00361 172 KRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILALVFLV 251
|
250 260 270
....*....|....*....|....*....|....*....
gi 1999119137 350 LSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLIS 388
Cdd:pfam00361 252 AMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
83-399 |
2.40e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 150.60 E-value: 2.40e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 83 KYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIY 162
Cdd:MTH00204 108 KFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLY 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 163 GFYGTLYLGMLKGVEF---TSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-FMML 238
Cdd:MTH00204 188 SITGTTDYQILLNIKLplsIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 239 GSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALA 318
Cdd:MTH00204 268 PAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 319 NISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYL 398
Cdd:MTH00204 348 TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
.
gi 1999119137 399 Y 399
Cdd:MTH00204 428 Y 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-399 |
9.74e-40 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 148.69 E-value: 9.74e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 47 NLGYLFGCDILSYGLILLSFWICALMVTASESVYRHKyfEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFL 126
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 127 ILGWGYqPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGM--LKGVEFTS---LLFYLSMVMAFLVKMPMFMVH 201
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIaeLAAAPLPLtaqLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 202 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLK-MNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVV 280
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAyFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 281 HMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPS 360
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 1999119137 361 LNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLY 399
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-398 |
3.70e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 144.68 E-value: 3.70e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 59 YGLILLSFWICALMVTASESVyrhKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPtLFLILG-WGYQPERL 137
Cdd:MTH00226 106 YFIILTGFIVPCSILISWHSV---KYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKM 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 138 QAGIYLLFYTLLASLPLLVGLFSIYGFYGTL-YLGMLKG----VEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAP 212
Cdd:MTH00226 182 QAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCshvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAP 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 213 VSGSMILAGVLLKLGGYGLLRVFMMLGSLGLK-MNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMT 291
Cdd:MTH00226 262 VAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 292 MTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLN 371
Cdd:MTH00226 342 HDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSIL 421
|
330 340
....*....|....*....|....*..
gi 1999119137 372 SLVMWSSVSMVMLMLISFFSAAYTLYL 398
Cdd:MTH00226 422 SSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
1.64e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 142.50 E-value: 1.64e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 51 LFGCDILSYGLILLSFWICALMVTAS-ESVyrhKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPtLFLILG 129
Cdd:MTH00217 75 VFAVDGISIFFLILTALLTPICILISwNSI---KFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIP-MFLIIG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 130 -WGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMVMAFL---VKMPMFMVHLWLP 205
Cdd:MTH00217 151 iWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLslaIKIPKIPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 206 KAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWI-GISLVGGFLISLVCLRQMDLKALIAYSSVVHMGM 284
Cdd:MTH00217 231 QAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 285 ALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLM 364
Cdd:MTH00217 311 VTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFV 390
|
330 340 350
....*....|....*....|....*....|....*
gi 1999119137 365 GEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLY 399
Cdd:MTH00217 391 GEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
47-399 |
7.27e-35 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 135.07 E-value: 7.27e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 47 NLGYLFGCDILSYGLILLSFWICALMVTASESVYRHKyfEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFL 126
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWESIQKR--VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 127 ILGWGyQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLY----LGMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHL 202
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFdlleLLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFM-MLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 282 MGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSL 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1999119137 362 NLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-426 |
5.77e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 131.18 E-value: 5.77e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 26 SLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASESVYrhkyfekMFLFLVIMLLMMLYFTFS 105
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNF-------NLLILSNLLILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 106 SMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMlkgveFTSLLFYL 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDF-----FLSWEMFF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 186 SMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRvfmMLGSLGLKMNYVWIGISLVGGFLISLVCL 265
Cdd:MTH00094 156 ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 266 RQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAM 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 346 WWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTLYLYSYSQHGSIYSGMYSCSMGYTREYLML 425
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFM 392
|
.
gi 1999119137 426 M 426
Cdd:MTH00094 393 M 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
47-399 |
1.04e-32 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 129.55 E-value: 1.04e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 47 NLGYLFGCDILSYGLILLSFWICALMVTASESVYRHKYFEKMFLFLviMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFL 126
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALL--WLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 127 ILGWGYqPERLQAGIYLLFYTLLASLPLLVGLFSIYGFY----GTLYLGMLKGVEFTS---LLFYLSMVMAFLVKMPMFM 199
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatGTFDIADLLNLPLPPgvqYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 200 VHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVfmmlgSLGL------KMNYVWIGISLVGGFLISLVCLRQMDLKAL 273
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF-----SLPLfpdashEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 274 IAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSS 353
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1999119137 354 NMAAPPSLNLMGE----VGLLNSLVMWSSVSMVMLMLisffSAAYTLYLY 399
Cdd:PRK05846 385 SLGLPGTSGFVGEflilLGSFQVNPVIAFIATTGLIL----AAVYSLWLY 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-341 |
6.62e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 100.88 E-value: 6.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 48 LGYLFGCDILSYGLILLSFWICALMVTASESVYRHKyfeKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 128 LGWGYQpERLQAGIYLLFYTLLASLPLLVGLFSIyGFYG---TLYLGMLKGVEFT---SLLFYLSMVMAFLVKMPMFMVH 201
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLAL-ALSGdtfTFDLAELGAKSYPlalELLLYAGFLIAFGVKLPIFPLH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 202 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFM-MLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVV 280
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1999119137 281 HMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMP 341
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
48-403 |
2.82e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 98.30 E-value: 2.82e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 48 LGYLFGCDILSYGLILLSFWICALMVTASESVYRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLI 127
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 128 LGWGYqPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGV-----EFTSLLFYLSMVMAFLVKMPMFMVHL 202
Cdd:COG0651 148 ALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARlaeldPGLLLAAFALLLVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMML--GSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVV 280
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 281 HMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPS 360
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1999119137 361 LNLMGEVGLLNSLVM-WSSVSMVMLMLISFFSAAYTLYLYSYSQ 403
Cdd:COG0651 387 SGFVSKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-358 |
1.30e-19 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 91.16 E-value: 1.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 52 FGCDILSYGLILLSFWICALMVTASESVYRHKyfeKMFLFLviMLLMmlYF----TFSSMSFFFFYLFFEASLIPTLFLI 127
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNS---RLFYFL--MLAM--YSgqigLFSSRDLLLFFIMWELELIPVYLLL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 128 LGWGYQpERLQAGIYLLFYTLLASLPLLVGLFSIyGFYG----TLYLGMLKGVEFT---SLLFYLSMVMAFLVKMPMFMV 200
Cdd:CHL00011 153 SMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-GLYGsnepTLNFETLANQSYPvalEILFYIGFLIAYAVKLPIIPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 201 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGIslVGGFLI---SLVCLRQMDLKALIAYS 277
Cdd:CHL00011 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVI--VGAIQIiyaASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 278 SVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAA 357
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLAL 388
|
.
gi 1999119137 358 P 358
Cdd:CHL00011 389 P 389
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
4.73e-19 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 89.38 E-value: 4.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 48 LGYLFGCDILSYGLILLSFWICALMVTASESVyrhKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLI 127
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 128 LGWGYQpERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGM--LKGVEFTS---LLFYLSMVMAFLVKMPMFMVHL 202
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtaLAAKDFGLgfqLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFM-MLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVH 281
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999119137 282 MGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAP 358
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
3.27e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 80.51 E-value: 3.27e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 48 LGYLFGCDILSYGLILL-SFWICALMVTASESVYRHKYFEKmflfLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLnSLLTLIAIYSSDESIQRPRFYYS----LLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 127 ILGWGYQpERLQAGIYLLFYTLLASLPLLVGLFSIYGFYG------------TLYLGmlkgvefTSLLFYLSMVMAFLVK 194
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGassfdyeplrshTLPLS-------TQLLLLAPILVGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 195 MPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWI-GISLVGGFLISLVCLRQMDLKAL 273
Cdd:PRK06473 219 IPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKM 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1999119137 274 IAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMN 338
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
38-401 |
8.56e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 72.99 E-value: 8.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 38 SGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTASESVYRHKyfEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFE 117
Cdd:PRK08375 59 AYVVGGWPPGIGIELRADSLSALFLLVTSILAIAALLYAIGYGEHR--QTRFYALFLLLLAGLLGALLTADLFNLFVFLE 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 118 ASLIPTLFLIlGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVE------FTSLLFylsMVMAF 191
Cdd:PRK08375 137 IMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvVTAFGF---VLLAL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 192 LVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMML--GSLGLKMNYVWI--GISLVGGFLISLVCLRQ 267
Cdd:PRK08375 213 ALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfgGDFRFALGLGWLlaVLALLSMLVGSLAALGQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 268 MDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWW 347
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAF 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1999119137 348 FLLSSSNMAAPPSLNLMGEVGLLNSLV-MWSSVSMVMLMLISFFSAAYTLYLYSY 401
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVeAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
117-357 |
9.29e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 66.66 E-value: 9.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 117 EASLIPTLFLILGWGYQpERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGM----LKGVEF-TSLLFYLSMVMAF 191
Cdd:PRK07363 137 ELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYdaisTQNLSLnTQLILLTGLLLGF 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 192 LVKMPMFMVHLWLPKAHVEAPVSGSM----ILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVclrQ 267
Cdd:PRK07363 216 GIKIPLVPLHTWLPDAYTEASPAVAIllggVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIA---Q 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 268 MDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWW 347
Cdd:PRK07363 293 KDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTS 372
|
250
....*....|
gi 1999119137 348 FLLSSSNMAA 357
Cdd:PRK07363 373 ALLVLAGMAS 382
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
117-390 |
9.39e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.49 E-value: 9.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 117 EASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMVMAFLVKMP 196
Cdd:MTH00062 101 ELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVP 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 197 MFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLkmnYVWIGISLVGGFLISLVCLRQMDLKALIAY 276
Cdd:MTH00062 181 LFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITACSELDGKRWLAF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 277 SSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMA 356
Cdd:MTH00062 258 LSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCS 337
|
250 260 270
....*....|....*....|....*....|....
gi 1999119137 357 APPSLNLMGEVGLLnslvmWSSVSMVMLMLISFF 390
Cdd:MTH00062 338 FPPTIQFFCEVFLV-----SSSFGVLVYLLFWCF 366
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-101 |
7.52e-11 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 59.08 E-value: 7.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 1 MLKFAVMLMFLIPLCFLYNFWW-----VVQSLMYLMVFMFMFSGSLFSLPCNLGYLFGCDILSYGLILLSFWICALMVTA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*...
gi 1999119137 76 SESVYRH--KYFEKMFLFLVIMLLMMLY 101
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLI 108
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
126-400 |
8.98e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 63.84 E-value: 8.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 126 LILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGML----KGVEFT------------SLLFYLSMVM 189
Cdd:PRK12667 152 LVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakiRGLSFPltgglagnpplaLGVALALALW 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 190 AFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGIS-------LVGGFLISL 262
Cdd:PRK12667 232 AFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSpiliilgAVSAIIGAL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 263 VCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPS 342
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1999119137 343 MAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMwssVSMVMLMLISFFSAAYTLYLYS 400
Cdd:PRK12667 392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISLVGYF 446
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-391 |
2.10e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 59.74 E-value: 2.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 4 FAVMLMFLIPLCFLYNFWWVVQSLMYLM--VFMFMFSGSL---FSLPCNL---GYLFGCDILSYGLILLSFWICAL-MVT 74
Cdd:PRK08667 11 LLLLAAAVIPLVFRHKRKRVWQSVLWLViaIALLLFAGSLqlfTGNPLDIplwGIAPGLDITFHIDRLAAFFIILIgLVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 75 ASESVYRHKYFEKMF-------------LFLVIMLLMMLyftfsSMSFFFFYLFFEASLIPTLFLILGWGYQPERLQAGI 141
Cdd:PRK08667 91 LCVAIYSLGYNEHMSsneranllsaltaLFILSMLGVVA-----SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 142 YLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 222 VLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSS-----VVHMGMALGGLMTMTGWG 296
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSienigIILMGIGLYVIFGVYGLD 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 297 FMSTYTLMIA------HGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLL 370
Cdd:PRK08667 326 TLALLALGGAlfhslnHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
410 420
....*....|....*....|....*.
gi 1999119137 371 NSL-----VMWSSVSMVMLMLISFFS 391
Cdd:PRK08667 406 ESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
126-362 |
8.59e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.41 E-value: 8.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 126 LILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGML--KGVEFTSLLFYLSMVM---AFLVKMPMFMV 200
Cdd:PRK08376 160 LVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavKMSENPTVVAKIALALfiaGLAMKSGAVPV 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 201 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGslglkmnyVWIGISLVGGFLISLVCLR----------QMDL 270
Cdd:PRK08376 240 HMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYG--------PAINLATVGWVIIILGCLTmfvgvamavvQKDV 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 271 KALIAYSSVVHMGMALGGL---MTMTGWGFMSTYTLM---------IAHGLCSSGLFALANISYERLGSRSLLVNKGLMN 338
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLgvgLAALGDPAMASYGEIalaggiyhiVNHALYKALLFLTAGAVIYETGTRNLNELGGLAR 391
|
250 260
....*....|....*....|....
gi 1999119137 339 FMPsMAMWWFLLSSSNMAAPPSLN 362
Cdd:PRK08376 392 TMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
194-366 |
2.79e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.71 E-value: 2.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 194 KMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMM----LGSLGLKMNYVWIGIS--LVGGFLIslvcLRQ 267
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILidaaIGSDFPGRLLLIFGLLsvLVAAFFL----LRQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 268 MDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAmWW 347
Cdd:PRK06458 303 RDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG-WG 381
|
170 180
....*....|....*....|
gi 1999119137 348 FLLSSSNMA-APPSLNLMGE 366
Cdd:PRK06458 382 LMLGALAIAgMPPFGVFISE 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-402 |
7.18e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.38 E-value: 7.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 181 LLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLvGGFLI 260
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 261 SLVC---LRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLM 337
Cdd:PRK08676 285 AVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVF 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999119137 338 NFMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSS--VSMVMLMLISFFSAAYTLYLYSYS 402
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwlVLAVLLLLLLAASSFAIFLLKAFT 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-362 |
1.01e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 54.38 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 117 EASLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVEFT---SLLFYLSMVMAFL- 192
Cdd:PRK12646 140 ELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHiknHGLFIPMIFMFLLg 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 193 --VKMPMFMVHLWLPKAhVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLISLVCLRQMDL 270
Cdd:PRK12646 220 afTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 271 KALIAYSSVVHMGMalggLMTMTGWG----------FMSTYTL--------MIAHGLCSSGLFALANISYERLGSRSLLV 332
Cdd:PRK12646 299 KGILAYSTISQLGM----IMAMVGIGggyaqhqqdaIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAGTRDIRI 374
|
250 260 270
....*....|....*....|....*....|
gi 1999119137 333 NKGLMNFMPSMAMwWFLLSSSNMAAPPSLN 362
Cdd:PRK12646 375 LSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
154-315 |
2.14e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 53.08 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 154 LLVGLFSIYGFYGTL-----YLGMLKGVEFTSLLFYLSMVMAF-LVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
Cdd:PRK08668 163 MLYAIFLIYAKTGTFdfadiSQGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLG 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 228 GYGLLRVFMMLGSLGL-----------KMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWG 296
Cdd:PRK08668 243 AYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLG 322
|
170
....*....|....*....
gi 1999119137 297 FMSTYTLMIAHGLCSSGLF 315
Cdd:PRK08668 323 FAGGLFHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
125-324 |
4.63e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 51.88 E-value: 4.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 125 FLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGV--EFTSLLFylsmvMAFLVKMPMFMVHL 202
Cdd:PRK07234 131 FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATAdpEAFALIA-----LGLLVKGGIFVSGL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 203 WLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGgfliSLVCLRQMDLKALIAYSSVVHM 282
Cdd:PRK07234 206 WLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1999119137 283 GMALGGLMTMtgwGFmstytLMIAHGLCSSGLFALANISYER 324
Cdd:PRK07234 282 GFILAAPLVG---GL-----YALAHGLVKSTLFLCAGALPSR 315
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
139-344 |
4.66e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 52.04 E-value: 4.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 139 AGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLG----MLKGVEFTSLLFYLSMVM---AFLVKMPMFMVHLWLPKAHVEA 211
Cdd:COG1007 154 AALKYFLLGALSSGFLLYGISLLYGATGSLNLAgiaaALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 212 PVSGSMILAGVLLKLGGYGLLRVFMM-LGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLM 290
Cdd:COG1007 234 PTPVTAFLATAPKIAAFAALLRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLA 313
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1999119137 291 TMTGWGFMSTYTLMIAHGLCSSGLFA-LANISYERLGSRSLLVNKGLMNFMPSMA 344
Cdd:COG1007 314 AGTPLGVSAALFYLLAYLFMNLGAFAvILLLSRKGGEAEEIEDLAGLARRSPLLA 368
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-317 |
1.13e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.59 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 149 LASLPLLVGLFSIYGFYGTLYLG----MLKGVEFTSLLFYLSMVM---AFLVKMPMFMVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAgiakALADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 222 VLLKLGGYGLLRVFMM-LGSLGLKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMST 300
Cdd:PRK05777 245 APKIAAFAVLLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAV 324
|
170
....*....|....*..
gi 1999119137 301 YTLMIAHGLCSSGLFAL 317
Cdd:PRK05777 325 LFYLLAYLFMTLGAFGV 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-396 |
1.25e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.50 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 58 SYGLILLSF-WICALMVTASESVYRHKYFEKMFLFLVIMLLMMLYFTFSSMSFFFFYLFFEASLIPTLFLIlGWGYQPER 136
Cdd:PRK06589 86 LIFLLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 137 LQAGI-YLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLKGVEFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSG 215
Cdd:PRK06589 165 LSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 216 SMILAGVLLKLGGYGLLRVFMMLGSLG-----LKMNYVWIGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLM 290
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 291 TMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPsMAMWWFLLSSSNMAAPPSLN------LM 364
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP-LISFIISISSLSLIGIPIFSgfiskfLI 403
|
330 340 350
....*....|....*....|....*....|..
gi 1999119137 365 GEVGLLNSLVMWSSVSMVMLMLISFFSAAYTL 396
Cdd:PRK06589 404 LLAASEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
137-393 |
1.94e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 47.22 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 137 LQAgiylLFYTLLASLPLLVGLFSIYGFYGTLYLGML--KGVEFTSLLFYLSMVMAFLV----KMPMFMVHLWLPKAhVE 210
Cdd:PRK12647 149 LQA----LLVTGGGGLALLAGLILLGNVTGTYSLSELlaSGDVIREHPLYLAILLLVLGgaftKSAQFPFHFWLPNA-ME 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 211 APV-------SGSMILAGVLLklggygllrvfMMLGSLGLKMNYVWIGI-SLVGG---FLISLVCLRQMDLKALIAYSSV 279
Cdd:PRK12647 224 APTpvsaylhSATMVKAGIYL-----------LARLNPVLGGTPLWQTIlPLFGGltmLTGALLAVRQTDLKLILAYSTV 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 280 vhmgMALGGLMTMTGWG----FMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNM 355
Cdd:PRK12647 293 ----SALGTLVMLLGLGselaIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
250 260 270
....*....|....*....|....*....|....*...
gi 1999119137 356 AAPPSLNLMGEVGLLNSLVMWSSVSMVmLMLISFFSAA 393
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLI-LTVAAVLGNA 405
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
4.97e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 4.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 185 LSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVF-----MMLGSLGLKMNYVWIGISLVGGFL 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 260 ISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALAN-ISYeRLGSRSLLVNKGLMN 338
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsISY-HFGTTKLEDCLNLWK 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1999119137 339 FMPSMAMWWFLLSSSNMAAPPSLNLMGEVGLLNSLVMWSS-VSMVMLMLISFFSAAYT 395
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAwIGLVVLLVGSGLSVIYV 429
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-359 |
5.90e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.14 E-value: 5.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 155 LVGLFSIYGFYGTL---YLGMLKGV--EFTSLLFYLSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAGVLLKLGGY 229
Cdd:PRK08377 175 LIGVALIYGATGTLnmaHIAQLAGTidPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLY 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 230 GLLRVFMMLGSLGLKMNYVW--IGISLVGGFLISLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAH 307
Cdd:PRK08377 255 AMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINH 334
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1999119137 308 GLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNMAAPP 359
Cdd:PRK08377 335 AIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPL 386
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
125-370 |
2.08e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.42 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 125 FLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLGMLkGVEF------TSLLFYLSMVMAFLVKMPMF 198
Cdd:PRK12665 148 YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADL-AVRLdelpsgTRTALFAVLLVAFGIKAAVF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 199 MVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMML---GSLGLKMNYVWIGISLVGgfliSLVCLRQMDLKALIA 275
Cdd:PRK12665 227 PLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLfpgGGLDTLLMVVALLTMVVG----ILGAIAQSDIKRLLS 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 276 YSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSNM 355
Cdd:PRK12665 303 FTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLG 382
|
250
....*....|....*
gi 1999119137 356 AAPPSLNLMGEVGLL 370
Cdd:PRK12665 383 GIPPFSGFIGKVALL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
178-374 |
5.54e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 42.34 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 178 FTSLLFYLSMVMAFlVKMPMFMVHLWLPKAHVEA-PVSGSMILAGVLLKLGGYGLlrVFMMLGSLGLKMNYVWIGISLVG 256
Cdd:PRK12650 206 LTTVVAVLIAVAAF-TKSAQFPFHFWLPEAMAAItPVSAFLHAAAVVKAGIYLLL--RFSPVFHDVAVWNWLLIIVGMIT 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 257 GFLISLVCLRQMDLKALIAYSSVVHmgmaLGGLMTMTGWG--FMSTYTLM--IAHGLCSSGLFALANISYERLGSRSLLV 332
Cdd:PRK12650 283 ALMGAVFAVQKTDLKKLTAYSTVSQ----LGWIVATIGVGtpFALTAAVVhtLAHALFKSSLFMLIGVVDHQAGTRDIRR 358
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1999119137 333 NKGLMNFMPsMAMWWFLLSSSNMAA-PPSLNLMGEVGLLNSLV 374
Cdd:PRK12650 359 LGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
125-396 |
3.19e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.93 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 125 FLILGWGYQPERLQAGIYLLFYTLLASLPLLVGLFSIYGFYGTLYLG----MLKGVEFTSLLFYLSMVM--AFLVKMPMF 198
Cdd:PRK12663 145 FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAhiamRLNDMGDTATLTTIALLFllAFGMKAALF 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 199 MVHlWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVFMML----GSLGLKMNYVWIGISLVGGfliSLVCLRQMDLKALI 274
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIG---ALGALAYKDIRRIA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 275 AYSSVVHMGMALGGLMTMTGWGFMSTYTLMIAHGLCSSGLFALANISYERLGSRSLLVNKGLMNFMPSMAMWWFLLSSSN 354
Cdd:PRK12663 301 GYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1999119137 355 MAAPPSLNLMGEVGLLNSLVMWSSVSMVMLMLISFFSAAYTL 396
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
149-317 |
8.12e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 38.39 E-value: 8.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 149 LASLPLLVGLFSIYGFYGTLYLGMLKGVEFT-----SLLFY--LSMVMAFLVKMPMFMVHLWLPKAHVEAPVSGSMILAG 221
Cdd:TIGR01770 164 FSSGLLLFGISLIYGFTGSLNFEDLLLFLSNgmlniSLLLLgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSI 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999119137 222 VLLKLGGYGLLRVFMMLGSLGLKMNYVWIGISLVGGFLI-SLVCLRQMDLKALIAYSSVVHMGMALGGLMTMTGWGFMST 300
Cdd:TIGR01770 244 VPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIgNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAV 323
|
170
....*....|....*..
gi 1999119137 301 YTLMIAHGLCSSGLFAL 317
Cdd:TIGR01770 324 LFYIFIYALMSLGAFGV 340
|
|
| |
