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Conserved domains on  [gi|1986780965|gb|QRR03330|]
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MFS transporter [Dyadobacter sandarakinus]

Protein Classification

MFS transporter( domain architecture ID 13024787)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
29-381 1.52e-83

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 259.45  E-value: 1.52e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGD-YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17489    13 YLLLPVLPLYAHDLGGSEaVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKE 187
Cdd:cd17489    93 IHGIGWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 188 TlKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFAGKIS 267
Cdd:cd17489   173 P-PPVAAEEAEAGTRAFRRLVEKKVLPPALILFLASIAYGAISTFLPLYAAERGISNAGLFFTVYAIALLLSRPFSGKLS 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 268 DQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGL 347
Cdd:cd17489   252 DRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPPHRRGAANGTFFIFFDLGIGL 331
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1986780965 348 GAFLSAGLFKNQREnlPLVFFSMAGFALAALAYT 381
Cdd:cd17489   332 GGLLLGLVAELFGY--RAMFLLAAVVVLLALVLY 363
 
Name Accession Description Interval E-value
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
29-381 1.52e-83

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 259.45  E-value: 1.52e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGD-YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17489    13 YLLLPVLPLYAHDLGGSEaVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKE 187
Cdd:cd17489    93 IHGIGWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 188 TlKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFAGKIS 267
Cdd:cd17489   173 P-PPVAAEEAEAGTRAFRRLVEKKVLPPALILFLASIAYGAISTFLPLYAAERGISNAGLFFTVYAIALLLSRPFSGKLS 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 268 DQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGL 347
Cdd:cd17489   252 DRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPPHRRGAANGTFFIFFDLGIGL 331
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1986780965 348 GAFLSAGLFKNQREnlPLVFFSMAGFALAALAYT 381
Cdd:cd17489   332 GGLLLGLVAELFGY--RAMFLLAAVVVLLALVLY 363
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
30-347 2.60e-41

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 148.97  E-value: 2.60e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYK-GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLV 108
Cdd:COG2814    28 IVLPALPLIAADLGASPAQaGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 109 HGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAILLNMKE 187
Cdd:COG2814   108 QGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLAlLLLLRLLPE 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 188 TLKEKQRLSVDAFKITRRDifePDVLSPALITFLCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTLFSILIRLFAG 264
Cdd:COG2814   188 SRPAARARLRGSLRELLRR---PRLLLLLLLAFLLGFGFFALFTYLPLYLQEvlgLSASAAGLLLALFGLGGVLGALLAG 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 265 KISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAG 344
Cdd:COG2814   265 RLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLG 344

                  ...
gi 1986780965 345 IGL 347
Cdd:COG2814   345 GPL 347
MFS_1 pfam07690
Major Facilitator Superfamily;
49-349 8.13e-29

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 114.82  E-value: 8.13e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:pfam07690  35 GLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWF 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL----NMKETLKEKQRLSVDAFKITR 204
Cdd:pfam07690 115 PPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILSLLAAVLLLlprpPPESKRPKPAEEARLSLIVAW 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 205 RDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGR---MPVTIAG 279
Cdd:pfam07690 195 KALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALlaGLLLGLGGLLGAIGRLLLGRLSDRLGRrrrLLLALLL 274
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 280 CCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGA 349
Cdd:pfam07690 275 LILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
PRK05122 PRK05122
major facilitator superfamily transporter; Provisional
30-386 4.36e-20

major facilitator superfamily transporter; Provisional


Pssm-ID: 235348 [Multi-domain]  Cd Length: 399  Bit Score: 91.10  E-value: 4.36e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYL-STMGGGD-YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPV-----FTTVMPF 102
Cdd:PRK05122   33 LPLAVLPGYVhDQLGFSAfLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLagllaAWPVLSL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 103 LLL---RLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSI 179
Cdd:PRK05122  113 LLLllgRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 180 AILLNMKE-TLKEKQRLSVdaFKITRRdifepdVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSIL 258
Cdd:PRK05122  193 LLARPRPAvPPVKGERLPF--RRVLGR------VWPYGMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVG 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 259 IRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMF 338
Cdd:PRK05122  265 ARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYS 344
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1986780965 339 ISLEAGIGLGAFLsAGLFKNQrENLPLVFFSMAGFALAALAYTVTIYQ 386
Cdd:PRK05122  345 VFLDLSLGITGPL-AGLVASW-FGYPSIFLAAALAALLGLALTWLLYR 390
2_A_01_02 TIGR00880
Multidrug resistance protein;
64-188 2.39e-15

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 72.30  E-value: 2.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  64 PFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMC 143
Cdd:TIGR00880  16 PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAG 95
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1986780965 144 MGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAILLNMKET 188
Cdd:TIGR00880  96 IALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAfILLAFLLPET 141
 
Name Accession Description Interval E-value
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
29-381 1.52e-83

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 259.45  E-value: 1.52e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGD-YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17489    13 YLLLPVLPLYAHDLGGSEaVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKE 187
Cdd:cd17489    93 IHGIGWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 188 TlKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFAGKIS 267
Cdd:cd17489   173 P-PPVAAEEAEAGTRAFRRLVEKKVLPPALILFLASIAYGAISTFLPLYAAERGISNAGLFFTVYAIALLLSRPFSGKLS 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 268 DQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGL 347
Cdd:cd17489   252 DRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPPHRRGAANGTFFIFFDLGIGL 331
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1986780965 348 GAFLSAGLFKNQREnlPLVFFSMAGFALAALAYT 381
Cdd:cd17489   332 GGLLLGLVAELFGY--RAMFLLAAVVVLLALVLY 363
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
30-382 3.33e-49

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 170.45  E-value: 3.33e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYK-GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLV 108
Cdd:cd17325    14 IIIPILPLYAESLGASVAQiGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 109 HGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKET 188
Cdd:cd17325    94 QGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLLPE 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 189 LKEKQRLSVDAFKITRRDIFE----PDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR---GYYFMVFTLFSILIRL 261
Cdd:cd17325   174 PRPPPNKRAVSAARLRSGLRLllrdRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPaqiGLLFGAQGLASALSQP 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 262 FAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISL 341
Cdd:cd17325   254 PAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAF 333
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1986780965 342 EAGIGLGAFLSAGLFknQRENLPLVFFSMAGFALAALAYTV 382
Cdd:cd17325   334 SLGMVLGPLLGGFLY--DAFGFATPFLAAAALLLLAAVLFL 372
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
30-347 2.60e-41

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 148.97  E-value: 2.60e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYK-GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLV 108
Cdd:COG2814    28 IVLPALPLIAADLGASPAQaGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 109 HGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAILLNMKE 187
Cdd:COG2814   108 QGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLAlLLLLRLLPE 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 188 TLKEKQRLSVDAFKITRRDifePDVLSPALITFLCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTLFSILIRLFAG 264
Cdd:COG2814   188 SRPAARARLRGSLRELLRR---PRLLLLLLLAFLLGFGFFALFTYLPLYLQEvlgLSASAAGLLLALFGLGGVLGALLAG 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 265 KISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAG 344
Cdd:COG2814   265 RLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLG 344

                  ...
gi 1986780965 345 IGL 347
Cdd:COG2814   345 GPL 347
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
49-381 5.99e-30

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 118.42  E-value: 5.99e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:cd17324    37 GLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLV 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIF 208
Cdd:cd17324   117 PPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWRLLPSLPPKKPGSLGLLSSLLLLLR 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 209 EPDVLSPALITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTC 285
Cdd:cd17324   197 NPRLRLAYLITFLLFGGFFALYTYLAPFltdVPGFSSSAIIGLLLLFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAA 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 286 AMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDnNRGRAIATMFISLEAGIGLGAFLSAGLFknQRENLPL 365
Cdd:cd17324   277 LLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAPE-ARGLASSLYLAAYNLGGALGAALGGLVL--DHGGWAG 353
                         330
                  ....*....|....*.
gi 1986780965 366 VFFSMAGFALAALAYT 381
Cdd:cd17324   354 VGWVGAALLLLALLLA 369
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
48-394 1.44e-29

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 118.06  E-value: 1.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  48 KGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADI 127
Cdd:COG2223    42 LGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKW 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 128 VPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSL-NALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRD 206
Cdd:COG2223   122 FPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWrNAFLILGILLLVVAVLAWLFLRDPPAGAAAAAKASLRDQLEA 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 207 IFEPDVLSPALITFLCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVL 283
Cdd:COG2223   202 LRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDqfgLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALM 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 284 TCAMIITGYA-DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFisleAGIGLGAF---LSAGLFKNQ 359
Cdd:COG2223   282 ALGLLLLALAlGSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVG----AAGGLGGFlgpLLFGALLDA 357
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1986780965 360 RENLPLVFFSMAGFALAALAYTVTIYQFKKRRTRA 394
Cdd:COG2223   358 TGSYTAAFLVFAVLALVALVLTLLLYRRPRRAAAA 392
MFS_1 pfam07690
Major Facilitator Superfamily;
49-349 8.13e-29

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 114.82  E-value: 8.13e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:pfam07690  35 GLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWF 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL----NMKETLKEKQRLSVDAFKITR 204
Cdd:pfam07690 115 PPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILSLLAAVLLLlprpPPESKRPKPAEEARLSLIVAW 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 205 RDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGR---MPVTIAG 279
Cdd:pfam07690 195 KALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALlaGLLLGLGGLLGAIGRLLLGRLSDRLGRrrrLLLALLL 274
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 280 CCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGA 349
Cdd:pfam07690 275 LILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
49-379 1.60e-26

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 108.80  E-value: 1.60e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:COG2271    48 GLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWF 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAIllnmketlkekqrlsvdafkitrrdif 208
Cdd:COG2271   128 PPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAAFLILGLPGLLLALL--------------------------- 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 209 epDVLSPALITFLCYFGYGAVSTVTPDF-STYLGLT--NRGYYFMVFTLFSILIRLFAGKISDQHGR--MPVTIAGCCVL 283
Cdd:COG2271   181 --RFWLLALAYFLVYFALYGFLTWLPTYlVEVRGLSlaQAGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLA 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 284 TCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQreNL 363
Cdd:COG2271   259 ALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDAT--GY 336
                         330
                  ....*....|....*.
gi 1986780965 364 PLVFFSMAGFALAALA 379
Cdd:COG2271   337 QAAFLLLAALALLAAL 352
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
29-379 7.47e-26

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 107.27  E-value: 7.47e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGDYK-GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17474    16 SIVDPILPAIAEALGASPAQvGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISqAFSLNALFYTSSFFAFLSIAILLNMK- 186
Cdd:cd17474    96 LQGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLA-AISWRYPFFLLAALIPVAFLAILFLLp 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 187 ETLKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFA 263
Cdd:cd17474   175 EPKEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLYFFLYFAFLTYLPFLlelLYGISPIIIGLLFAGWSVLLALGSLFV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 264 GKISDQHGRM-PVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLE 342
Cdd:cd17474   255 GRLLKKRFGArRILVIGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEERGTASSLYNFVRF 334
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1986780965 343 AGIGLGAFLSAGLFKNQreNLPLVFFSMAGFALAALA 379
Cdd:cd17474   335 LGQAVGPLLFGLLLEIF--GLSAPFLVGAAIALAAAV 369
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
30-186 5.81e-24

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 101.88  E-value: 5.81e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17325   217 ALEPFLPLYAAELGGLSPAqiGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLA 296
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMK 186
Cdd:cd17325   297 LLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
30-378 1.67e-22

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 97.61  E-value: 1.67e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMG-GGDYKGAIIGLFTLTAGLSRPFSGRLTDRIG-RVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17370    17 MARSILPLFLVVLGaSAAAVGLIEGLAEALGSLLRLFSGYLSDRTGkRKPLVILGYGLSALAKPLLALAGSWQLVLLLRI 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLN--ALFYTSSFFAFLSIAILLNM 185
Cdd:cd17370    97 LERLGKGIRTPPRDALLADATPPSGRGKAFGLHRALDTLGAVLGPLLAALLLYLLGGNyrTIFLLAAIPALLALLILLFV 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 186 KETLKEKQRLSVDAFKItrrdifEPDVLSPALITFLCYFGYGAVSTVTPDFSTY------LGLTNRGYYFMVFTLFSILI 259
Cdd:cd17370   177 VKEYPRPPKLRKKSKKT------SLKKLPKAFWLYLLAVALFALGNFSFAFLILraqelgLSAALIPLLYALFNLVYALA 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 260 RLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFi 339
Cdd:cd17370   251 AYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTAYGLFN- 329
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1986780965 340 sleAGIGLGAFLSAGLFKN--QRENLPLVFFSMAGFALAAL 378
Cdd:cd17370   330 ---TVVGIGWLLASLIAGYlwDLISPSAAFLFSAVLALIAL 367
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
49-384 4.10e-20

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 90.75  E-value: 4.10e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFT-----TVMPFLLLRLVHGFSTGFKPTGTSAY 123
Cdd:cd06173    37 GLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLAllgslSLWLLLVLAFLLGIASAFFGPARQAL 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 124 VADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSV-----D 198
Cdd:cd06173   117 LPELVPKEQLVRANALNSLATQLARIIGPALGGLLVALLGPGGAFAINALSFLLSALLLLFIRRPPPAAPGESSslllrD 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 199 AFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSI---LIRLFAGKISDQHGRMPV 275
Cdd:cd06173   197 LREGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVgalLGALLLGRLSKRRRRGRL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 276 TIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:cd06173   277 LLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLL 356
                         330       340
                  ....*....|....*....|....*....
gi 1986780965 356 FknQRENLPLVFFSMAGFALAALAYTVTI 384
Cdd:cd06173   357 A--DALGLSAVFLLAGALLLLAALLLLLL 383
PRK05122 PRK05122
major facilitator superfamily transporter; Provisional
30-386 4.36e-20

major facilitator superfamily transporter; Provisional


Pssm-ID: 235348 [Multi-domain]  Cd Length: 399  Bit Score: 91.10  E-value: 4.36e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYL-STMGGGD-YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPV-----FTTVMPF 102
Cdd:PRK05122   33 LPLAVLPGYVhDQLGFSAfLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLagllaAWPVLSL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 103 LLL---RLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSI 179
Cdd:PRK05122  113 LLLllgRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 180 AILLNMKE-TLKEKQRLSVdaFKITRRdifepdVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSIL 258
Cdd:PRK05122  193 LLARPRPAvPPVKGERLPF--RRVLGR------VWPYGMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVG 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 259 IRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMF 338
Cdd:PRK05122  265 ARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYS 344
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1986780965 339 ISLEAGIGLGAFLsAGLFKNQrENLPLVFFSMAGFALAALAYTVTIYQ 386
Cdd:PRK05122  345 VFLDLSLGITGPL-AGLVASW-FGYPSIFLAAALAALLGLALTWLLYR 390
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
49-382 1.39e-19

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 89.41  E-value: 1.39e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:cd06174    34 GLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLF 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLN--ALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDA------F 200
Cdd:cd06174   114 PERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGwrAVFLIAAALALLAAILLLLVVPDPPESARAKNEEassksvL 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 201 KITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFAGKISDQH-GRMPVT 276
Cdd:cd06174   194 KLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFlldLGGLSVAVAGLLLSLFGLAGALGSLLLGLLSDRLiGRKPLL 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 277 IAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLF 356
Cdd:cd06174   274 LIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLL 353
                         330       340
                  ....*....|....*....|....*.
gi 1986780965 357 kNQRENLPLVFFSMAGFALAALAYTV 382
Cdd:cd06174   354 -AATFGLTGAFLVLAVLLLLAAILLL 378
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
51-377 3.02e-19

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 88.40  E-value: 3.02e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  51 IIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPA 130
Cdd:cd17473    40 LLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFEG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 131 NRRGEAMGIHGMCMGVGSAFGPAIGSLISQaFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIfEP 210
Cdd:cd17473   120 EERAKMLGLQSAAMSLGGVVFLLLGGALAE-IGWRAPFLVYLLALPVLILVLLFLPEPARKSKSAASPGAATAAALP-WK 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 211 DVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR---GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAM 287
Cdd:cd17473   198 RVLPIYFLAFLAMLLFYVIPIQLPFLLQERGGGSAaliGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGF 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 288 IITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIA--TMFISleagigLGAFLSA---GLFKNQREN 362
Cdd:cd17473   278 LLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVPPELRGRAMGivTSAFF------LGQFLSPlvlGPLVNLTGG 351
                         330
                  ....*....|....*
gi 1986780965 363 LPLVFFSMAGFALAA 377
Cdd:cd17473   352 LSGAFLILGVLALVL 366
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
49-381 3.80e-19

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 88.00  E-value: 3.80e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:cd17477    34 GLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALA 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAfsLNALFYTSSFFAFLSIAILLNMKETLKE-KQRLSVDAFKITRRdi 207
Cdd:cd17477   114 TNENRGRVLGLYSTVLGLGFALGPLLLALVGTA--GALPFLIAAVLLLLALVPLLLTRRAAPEiEEAESISLRRLLRI-- 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 208 fepdVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVtIAGCCVLTC 285
Cdd:cd17477   190 ----APLALLGAFVAGFLEGAFYSLLPLYGLRLGLSVAqaALLLAAFVLGGLLLQWPLGWLADRFDRRRV-LLGCALLGA 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 286 AMIITGYADSIT--LFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFknQRENL 363
Cdd:cd17477   265 LAALLLPLVPGLplALLVLLFLWGGAAGPLYTLALALAGDRLPGDELVAANAALLLLYGLGSVIGPLLAGALM--DAFGP 342
                         330
                  ....*....|....*...
gi 1986780965 364 PLVFFSMAGFALAALAYT 381
Cdd:cd17477   343 HGLFLFLAAVALLFLLFL 360
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
29-380 1.09e-18

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 86.55  E-value: 1.09e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGD------YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPF 102
Cdd:cd17391    13 SLIAPFLPLYIEQLGVTSgglvelWSGLAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 103 LLLRLVHGFSTGFKPTGTsAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAI 181
Cdd:cd17391    93 LILRLLQGVFSGYVPNAT-ALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIRNVFFITGGLLFLAfLLT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 182 LLNMKETLKEKQRLSVDAFKITRRDIFEPD-VLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYF---MVFT---L 254
Cdd:cd17391   172 LFFVKEDFKPVEKKKMVSTKEVWNSVPNPSlLISLFVTTFIIQLANQSIEPILTLYIRQLMGDASNLAFisgLVFSatgV 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 255 FSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGR-- 332
Cdd:cd17391   252 SSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKITPKEVAGRif 331
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1986780965 333 AIATMFISLEAGIG--LGAFLSAGLfknqreNLPLVFFSMAGFALAALAY 380
Cdd:cd17391   332 GYNQSFQYLGNVAGplLGSAIAAHF------GYRAVFVVTALLVLLNAIW 375
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
30-381 1.34e-18

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 86.09  E-value: 1.34e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGG----GDYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLL 105
Cdd:cd17330    14 IVFPVLPFYVREFNKlgasGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLA 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 106 RLVHGFSTGFKPTgTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLnm 185
Cdd:cd17330    94 RFLDGLTGGNVSV-AQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLVAAALALLNLVLVL-- 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 186 ketlkekqrlsvdafkitrrdIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTY-LGLTNR--GYYFMVFTLFSILIRLF 262
Cdd:cd17330   171 ---------------------FFLPPLRRLLLVYFLIALAFAGLESVFSLFLKDrFGFSPSqiGLLLALVGIAGILAQLL 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 263 -AGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISL 341
Cdd:cd17330   230 lIPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSVPLLVLAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQGIIQSLQ 309
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1986780965 342 EAGIGLGAFLSAGLFknqRENLPLVFFSMAGFALAALAYT 381
Cdd:cd17330   310 SLARIIGPLLAGPLY---SFLGPGVPFLLAAGLLLIALFL 346
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
49-381 6.92e-18

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 84.20  E-value: 6.92e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:cd17329    38 GLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIADVT 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLI-----SQAFSLNALFYtSSFFAFLSIAILLNMKETLKEKQRLSVDAFKIT 203
Cdd:cd17329   118 TPENRTRAFSLLYWAINLGVAIGPLLGGLLllysfRLLFLAAAVLF-LLAALVLLFLLPETRPKRRAAEKTEILRGYKIV 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 204 RRDIFepdVLSPALITFLCYFGYGAVSTVTPDFST---YLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGC 280
Cdd:cd17329   197 LRDRA---FLLFLLASFLISLIYFQLESTLPVYVVeilGLGESLLGLLLALNALLIVLLQFPVARLVERFRLRKILMIGI 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 281 CVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIAtmFISLEAGIG--LGAFLSAGLFKN 358
Cdd:cd17329   274 LLFAIGFAVLAFANTLAVLILAMIVLTLGEMLVFPAVQTLVAALAPPDKRGSYMG--FYALAWGLGraIGPLVGGLLLDL 351
                         330       340
                  ....*....|....*....|...
gi 1986780965 359 QRENLPLVFFSMAGFALAALAYT 381
Cdd:cd17329   352 LGPGLPWLILAALGLIAAALLLG 374
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
55-385 1.65e-17

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 82.99  E-value: 1.65e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRG 134
Cdd:cd17321    40 YLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAIMPASLALIAATFPGERRG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 135 EAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIaillnmketlkekqrlsvdafkitrrdIFEPDVLS 214
Cdd:cd17321   120 RALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLINVPIGLVAL---------------------------LLARTFSG 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 215 PALITFLCYFGYGAVSTVTPDFSTY-LGLT--NRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMII-- 289
Cdd:cd17321   173 AVLAAFLLGAALGGLLFLLPLYLQGvLGYSplQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLLLla 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 290 -TGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRA--IATMFISLEAGIGLGAF--LSAGLFKNQRENLP 364
Cdd:cd17321   253 lLGADSSVWLLLPGLVLLGLGLGLFATPLTNAALSSVPKEKAGAAsgILNTARQLGGALGVALLgaLLTAGLSANLGDSG 332
                         330       340
                  ....*....|....*....|.
gi 1986780965 365 LVFFSMAGFALAALAYTVTIY 385
Cdd:cd17321   333 VAALLSAAAAAFAAGFHLAFL 353
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
52-381 2.75e-17

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 82.62  E-value: 2.75e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  52 IGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGsLVCFVCGFLYPVFTTVMP-FLLLRLVHGFSTGFKPTGTSAYVADIVPA 130
Cdd:cd17320    40 LSAYLLGFALGQLLYGPLSDRFGRRPVLLAG-LLLFILASLLCALASSIEqLLIARFLQGLGAAAGSVVARAIVRDLYSG 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 131 NRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAILLNMKETLKEKQR--LSVDAFKITRRDI 207
Cdd:cd17320   119 AELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLALLGLLLlLLVLLFLPETLPEEKRkpLLSSLLRAYKRVL 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 208 FEPDVLSPALITFLCYFGYGAVSTVTPD-FSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHG-----RMPVTIAG 279
Cdd:cd17320   199 KNRRFLGYALALGLSFAGLFAYLAAAPFiYIEQLGLSPAqfGLLFALNAIALILGSLLNGRLVRRFGprrllRLGLLLLL 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 280 CCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGdNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQ 359
Cdd:cd17320   279 AAALVLLLAALLGGLSLWPLVAPLFLIFFGFGLIFPNATSLALEPFP-HVAGTASALLGFLQFLIGALAGALVGLLPNGT 357
                         330       340
                  ....*....|....*....|..
gi 1986780965 360 RENLPLVFFSMAGFALAALAYT 381
Cdd:cd17320   358 ALPMGLLILVLGLLALLLLILL 379
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
49-334 1.18e-16

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 80.72  E-value: 1.18e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLT-AGLSRPFsGRLTDRIGRVPVMAFGsLVCFVCGFLYPVFTTVMPFLLL-RLVHGfsTGFKPTGTSAYVAD 126
Cdd:cd17472    35 GLALGIYGLTqAIFQIPF-GLLSDRIGRKPVILFG-LLLFIAGSLLAAYATSIYGLILgRALQG--SGAISSVVMALLAD 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 127 IVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRD 206
Cdd:cd17472   111 LTREENRTKAMALIGASIGIAFAISMVLGPLLAAHLGVSGLFLITAILSLVSLLILLFFVPDPPKIVQISEKEKKKLKKL 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 207 IFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTnRGYYFMVFT---LFSILIRLFAGKISDQHGRMPVTIAGCCVL 283
Cdd:cd17472   191 LKNKRLLRLDFSIFILHFVLMAFFYILPLLLTQLGGG-KGQLWKVYLpaiLIGFILMVPFVIYAEKKGKMKQVFVSSILL 269
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 284 TCAMIIT--GYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAI 334
Cdd:cd17472   270 IAVGFLLllFAATSLWLLIIGLIIFFIGFNLLEALLPSLVSKIAPKEYRGTAM 322
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
49-391 1.72e-16

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 80.28  E-value: 1.72e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:COG0738    46 GLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALG 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGeAMGIHGMCMGVGSAFGPAIGSLISQA---FSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRR 205
Cdd:COG0738   126 PETAAS-RLNLLHAFFSLGALLGPLLGGLLILLglsLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEEEEAAGSAASLK 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 206 DIF-EPDVLSPALITFLCYFGYGAVSTVTPDF-STYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCC 281
Cdd:COG0738   205 SLLkNPRLLLGGLAIFLYVGAEGAIGDWLPLYlKDVLGLSEAtaALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSAL 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 282 VLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDnNRGRAIATMFISLEAGIGLGAFLSAGLFknQRE 361
Cdd:COG0738   285 LAAVGLLLALLAPGPWLALIGLALVGLGLSLMFPTIFSLALDGLGK-RTAAAVSAVLIMGIVGGAIGPPLIGFLA--DAF 361
                         330       340       350
                  ....*....|....*....|....*....|
gi 1986780965 362 NLPLVFFSMAGFALAALAYTVTIYQFKKRR 391
Cdd:COG0738   362 GLRAAFLVPLVCYLLILLLALALKRKRRKK 391
2_A_01_02 TIGR00880
Multidrug resistance protein;
64-188 2.39e-15

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 72.30  E-value: 2.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  64 PFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMC 143
Cdd:TIGR00880  16 PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAG 95
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1986780965 144 MGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLS-IAILLNMKET 188
Cdd:TIGR00880  96 IALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAfILLAFLLPET 141
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
32-377 2.42e-15

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 76.88  E-value: 2.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  32 IPELPGYLSTMGGG-DYKGAIIGLFTLTAGLSRPFSGRLTDRIG-RVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVH 109
Cdd:cd17490    16 VPFLSPYAESLGASlSMIGIILGAYGISQMLLRIPLGILSDRIGkRKLFIIIGLLFTVLASLIMILFPSPWGLLIARFLS 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 110 GFSTGFKPTGTSAYVAdIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETL 189
Cdd:cd17490    96 GIAAATWVSFTVLYAS-YFPPDEAAKAMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPFLLAALAGVLGFILSLFIKEER 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 190 KEKQRLSVDaFKITRRDIFEPDVLSPALITFLCYF-GYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAG-K 265
Cdd:cd17490   175 REKKPVLTE-LKELLSVLKDKKLLFFSLLAILQQMiTFSTTFGFTPLIAKQLGASSFqlGLLSIIYLLPNALASLLSGtL 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 266 ISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIAtMFISLEA-G 344
Cdd:cd17490   254 FYKKLGERNTIIIGFLLLGAYCFLIPFAPNLTLLYLLQALNGFGTGILFPLLMSLSIEGVPAEQRSTAMG-FFQAIYAlG 332
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1986780965 345 IGLGAFLSAGLfkNQRENLPLVFFSMAGFALAA 377
Cdd:cd17490   333 MFLGPVLVGII--SEAFGLQTGFFVIGVIALLA 363
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
216-379 3.18e-15

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 76.17  E-value: 3.18e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:COG2814    16 ALGAFLSGLGIGIVLPALPLIAADLGASPAqaGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFknQRENLPLVFFSMAGF 373
Cdd:COG2814    96 PSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLA--DLFGWRWVFLVNAVL 173

                  ....*.
gi 1986780965 374 ALAALA 379
Cdd:COG2814   174 ALLALL 179
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
30-378 8.54e-15

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 75.36  E-value: 8.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYL-----STMGGGDYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFgSLVCFVCGFLYPVFTTVMPFLL 104
Cdd:cd17388    17 LIMPVLPTLLrefvgDSADAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLL-SLAGAALDYLLMAFAPTLWWLY 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 105 L-RLVHGFsTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQaFSLNALFYTSSFFAFLSIAI-L 182
Cdd:cd17388    96 LgRIIAGI-TGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGE-ISPRAPFLVAAGLNGLNFLLgL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 183 LNMKETLKEKQR-----LSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTL 254
Cdd:cd17388   174 FVLPESLPPERRrafrwRRANPFGSLRWLTGFPGLLGLLAVFFLIQLIGQVPATTWVLFTEDrfdWSPTMVGLSLAVFGL 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 255 FSILIRLF-AGKISDQHGRMPVTIAGCCVLTCAMIITGYADS---ITLFLIGAAFFGMAMGILSPVLSAWTvdlsGDNNR 330
Cdd:cd17388   254 LHALFQAFvTGPIAKRLGEKRAILLGLAADALGFLLLAFATQgwmVFPILILLALGGIAGPALQGLLSRQV----PENEQ 329
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1986780965 331 GR---AIATMfISLeAGIgLGAFLSAGLFKNQRENLP-LVFFSMAGFALAAL 378
Cdd:cd17388   330 GElqgVLTSL-TSL-TSI-IGPLLFTGIFAASPATWPgLAWIIGAALYLICL 378
PRK12382 PRK12382
putative transporter; Provisional
49-389 2.41e-14

putative transporter; Provisional


Pssm-ID: 183487 [Multi-domain]  Cd Length: 392  Bit Score: 73.94  E-value: 2.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLY------PVFTTVMPFLLL--RLVHGFSTGFKPTGT 120
Cdd:PRK12382   54 GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYllaailPVSAPFKFALLVvgRLILGFGESQLLTGA 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 121 SAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEK----QRLS 196
Cdd:PRK12382  134 LTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAHAgerpSLWS 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 197 VDAFkitrrdifepdVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVT 276
Cdd:PRK12382  214 VVGL-----------IWKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 277 IAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLsAGLF 356
Cdd:PRK12382  283 IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPL-AGML 361
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1986780965 357 KNQReNLPLVFFsmAGFALAALAYTVTIYQFKK 389
Cdd:PRK12382  362 ATSF-GYPSVFL--AGAISAVLGIIVTILSFRR 391
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
49-263 2.65e-14

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 72.92  E-value: 2.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:COG0477    52 GWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELF 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIF 208
Cdd:COG0477   132 PARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLINAPLGLLALVLRLRLPESRGLLLALLALALAALLLAAL 211
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1986780965 209 EPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFA 263
Cdd:COG0477   212 ALALLALLLLLLLLLLALLALLLAGAALLLLLALLLLALLLLLALLLLAALLLLL 266
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
50-183 5.62e-14

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 72.58  E-value: 5.62e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  50 AIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVP 129
Cdd:cd17370   238 LLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVP 317
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1986780965 130 ANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17370   318 AELRGTAYGLFNTVVGIGWLLASLIAGYLWDLISPSAAFLFSAVLALIALLLLL 371
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
49-355 6.18e-14

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 73.01  E-value: 6.18e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIG-----RVPVMAFGSLVCFVCGFLYPVFTTVMP------FLLLRLVHGFSTGFKP 117
Cdd:COG2211    49 GLILLVARLWDAITDPLIGALSDRTRtrwgrRRPWILIGAIPLALSFVLLFTAPDLSPtgkliyALVTYLLLGLAYTLVN 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 118 TGTSAYVADIVP-ANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNA---LFYTSSFFAFLSIAILLNMKETLKEKQ 193
Cdd:COG2211   129 IPYSALGAELTPdYEERTRLSSWRFAFAGLGGLLASVLPPPLVAAFGGDAalgYRLTALIFAVLGLLAFLLTFFGTKERP 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 194 RLSVDAFKITR--RDIFEPDVLSPALITFLCYF-GYGAVSTVTPDFSTY-LGLTNR--GYYFMVFTLFSILIRLFAGKIS 267
Cdd:COG2211   209 VPEEEKVSLKEslKALLKNRPFLLLLLAYLLFFlALALVAALLLYYFKYvLGLSAAlvGLLLALYFLAALLGAPLWPRLA 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 268 DQHGRMPVTIAGCCVLTCAMIITGYA--DSITLFLIGAAFFGMAMGILSPVLSAWTVDL-------SGDNNRGRAIATMF 338
Cdd:COG2211   289 KRFGKKKAFIIGLLLAALGLLLLFFLgpGNLWLLLVLAALAGIGLGAILVLPWAMLADVvdydewkTGRRREGLYFGIFT 368
                         330
                  ....*....|....*..
gi 1986780965 339 ISLEAGIGLGAFLSAGL 355
Cdd:COG2211   369 FAIKLGQALAGALAGLL 385
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
55-387 8.33e-14

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 72.22  E-value: 8.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRG 134
Cdd:cd17503    40 YLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 135 EAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILlnmketlkekQRLSVDAFKItrrdifePDVLS 214
Cdd:cd17503   120 AAMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFYINLPIGILALLLA----------PLLDLRLFKD-------RNFTL 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 215 PALITFLCYFGYGAVSTVTPDF-STYLGLT--NRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAG--CCVLTCAMII 289
Cdd:cd17503   183 GLLLSFLLGLGLFGAMFLLPLYlQNVLGYSafESGLVLAPGGLASAILSPLVGRLLDKFGPRLLLLAGllLLALGTLLLA 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 290 TGYADSITLFLIGAAF-FGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLG-AFLSAGLFKNQRENLPLVF 367
Cdd:cd17503   263 FLTPDTSLWLIILPLFiRGLGMGLVFMPLNTLALNSLPPEQIGDATALFNTIRQLGGSIGtALLATLLTNRTQFHHSRLS 342
                         330       340
                  ....*....|....*....|
gi 1986780965 368 FSMAGFALAALAYTVTIYQF 387
Cdd:cd17503   343 ELLAQQVQKQALIIAFNDAF 362
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
49-379 6.14e-13

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 69.52  E-value: 6.14e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:COG2807    56 GLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAVGNVLLPGLIKRWF 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PaNRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKiTRRDIF 208
Cdd:COG2807   136 P-DRVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLWLPLLRRRPAAAAAAPAAAS-LRSLWR 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 209 EPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCA 286
Cdd:COG2807   214 SPLAWLLTLFFGLQSLLYYAVVAWLPPILRDAGLSAAtaGLLLSLFQLAGIPGSLLVPLLADRLGDRRPLLLLLGLLGLA 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 287 MIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISleAGIGLGAF--LSAGLFKNQRENLP 364
Cdd:COG2807   294 GLLGLLLAPGSLPWLWAVLLGLGQGGLFPLALTLIGLRARTPAEAAALSGMAQS--VGYLLAALgpLLVGALHDATGSWT 371
                         330
                  ....*....|....*
gi 1986780965 365 LVFFSMAGFALAALA 379
Cdd:COG2807   372 AALLLLAALAVLMLV 386
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
30-338 1.04e-12

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 68.87  E-value: 1.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYKGAIIGLFTLTAG-LSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLV 108
Cdd:cd17371    17 LLGLVLPALIAEFGLDEAEAGLLGTVTLAGGaIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRAL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 109 HGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLN----ALFYTSSFFAFLSIAILLN 184
Cdd:cd17371    97 AGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPLLPPEiawrVLFLLGALPALLVLFIRRF 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 185 MKET---LKEKQRLSVDAFKITRRDIFEPDVLSPALITFL----CYFGYGAVSTVTPDFST---YLGLTNRGYYFMVFTL 254
Cdd:cd17371   177 VKEPpqwQAARAARRHFADRPSLRELFSPPLLRTTLLASLlatgALGGYYGITTWLPSYLTgerGLSFEGSAGYLVVTIL 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 255 FSILIRLFAGKISDQHGRMPVTIAG-CCVLTCAMIITGYADSITLFLIGAAFFGMAMGIlspVLSAWTVDLS-------- 325
Cdd:cd17371   257 GGFLGYLAGGFLADRIGRRNNFALFaLGSAISILLYFFLPLSPTLILILGFPLGFFASG---PFSGMGAYLTelfptavr 333
                         330
                  ....*....|....*...
gi 1986780965 326 -----GDNNRGRAIATMF 338
Cdd:cd17371   334 ataqgFCYNVGRIIGALF 351
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
35-183 1.13e-12

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 68.74  E-value: 1.13e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGR--VPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHG 110
Cdd:COG2271   203 LPTYLVEVRGLSLAqaGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAALALLLLALLPSPALAIALLFLAG 282
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 111 FSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:COG2271   283 FGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLAL 355
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
49-356 2.03e-12

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 68.07  E-value: 2.03e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIG-LFTLTAGLSRPFSGRLTDRIGRVPVM---AFGSLVCFVCGFLYPVFTTvmpFLLLRLVHGFSTGFKPTGTsAYV 124
Cdd:cd17389    66 GGLIGsLFSLLQFLSSPITGAASDVYGRKPVLlltMIGLAISYALWAVSRSFTI---FLLSRIVGGISKGNVSLST-AIV 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 125 ADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLIS-QAFSLNALFY-TSSFFA-FLSIAILLN----MKETLKEKQRlsv 197
Cdd:cd17389   142 ADVTSPKKRSKGMALIGVAFSLGFIIGPMIGAYFAsFTRSLGEVFFsMPALFAlVLALADLLFifffLPETLPSNLR--- 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 198 dafkitrrdifepdvlSPALITFLCYFGYGA----VSTVTPDFSTYLGLTNRGYYFMVFTLFSILIRLFAGKISdQHGRM 273
Cdd:cd17389   219 ----------------RLGLVYFLYLFLFSGleftLTFLTHQRFQYTSMQQGKMFFFIGIIMALVQGGYVRRIK-PGKEK 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 274 PVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATmFISLEA-GIGLGAFLS 352
Cdd:cd17389   282 KAVLQGLILLIPAFLLIGWASSVTVLYAGLFLYSFAAATVVPCLTTLVSGYGSDDQKGTVMGI-FRSLGAlARALGPIVA 360

                  ....
gi 1986780965 353 AGLF 356
Cdd:cd17389   361 CTVY 364
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
52-379 3.75e-12

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 66.86  E-value: 3.75e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  52 IGLFTLTAGLSRPFS----GRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADI 127
Cdd:cd17316    38 TGLLFAAGFLGRPIGallfGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEF 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 128 VPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLN----ALFYTSSFFAFLSIAILLNMketlkekqrlsvdafkit 203
Cdd:cd17316   118 APSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDwgwrILFLIGALPALLALLLRRRT------------------ 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 204 rrdifepdvLSPALITFLCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGC 280
Cdd:cd17316   180 ---------LLLILLWFFISFGYYGLTTFLPTYLQTvlgLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGL 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 281 CVLTCAMIITGYADSITLFLIGAAFFGMA--MGILSPVLSAWTVDLSGDNNRGRAIATMFiSLEAGIGLGAFLSAGLFKN 358
Cdd:cd17316   251 ILSGILALPLFYLLSGSPTLLLLLLFILSffVGGVWGALYAYLAELFPTEVRATGVGLSY-NLGRLGGGGAPPLIALLLA 329
                         330       340
                  ....*....|....*....|.
gi 1986780965 359 QRENLPLVFFSMAGFALAALA 379
Cdd:cd17316   330 STGGTGVPALILALLAIVALI 350
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
217-391 1.09e-10

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 62.63  E-value: 1.09e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 217 LITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:cd17329     6 IGSFLNRLGFFMVWPFMAIYlhqQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQRENLPLVFFSMAGF 373
Cdd:cd17329    86 HSPWLFAIALVLTGFGGGLFEPASEAMIADVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSFRLLFLAAAVLFLL 165
                         170
                  ....*....|....*...
gi 1986780965 374 ALAALAYTVTIYQFKKRR 391
Cdd:cd17329   166 AALVLLFLLPETRPKRRA 183
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
44-183 1.88e-10

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 61.84  E-value: 1.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  44 GGDYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVcFVCGFLYPVFTTVMPFLLLR-LVHGFSTGFKPTGTSA 122
Cdd:cd17489   225 GISNAGLFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLL-LALGLLLLSFAGSPWMLLLAaVLYGLGFGLLFPALQA 303
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1986780965 123 YVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17489   304 LAVDLVPPHRRGAANGTFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYI 364
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
33-185 1.96e-10

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 61.90  E-value: 1.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  33 PELPGYLSTMGGGDYK-----GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRL 107
Cdd:cd17391   222 PILTLYIRQLMGDASNlafisGLVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRF 301
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNM 185
Cdd:cd17391   302 LLGLATGGLLPAINSLLAKITPKEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRAVFVVTALLVLLNAIWSFIF 379
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
29-306 2.49e-10

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 61.42  E-value: 2.49e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPgYLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLR 106
Cdd:cd17478    13 GFLPALLP-LLIAKLGLSYAqaGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 107 LVHGFSTG-FKPTGTSayVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNM 185
Cdd:cd17478    92 ALAGIGSAaFHPEGAR--LASQAAGGRRGLAMSIFSVGGNLGFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRL 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 186 KETLKE--KQRLSVDAFKITRRDIFEPdVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRL 261
Cdd:cd17478   170 RPLKKPeaKKAAAKSSARSTLKGVWRA-LLLLLIIVFLRSWVLSSLTTFLPFYLVQRGYSLVfaGLLLSLFLFAGAIGTL 248
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1986780965 262 FAGKISDQHGRMPVTIAGCCVLTCAMII----TGYADSITLFLIGAAFF 306
Cdd:cd17478   249 IGGPLSDRFGRRRVIIASLLLAAPFLLLflltPGIWSYILLVLAGFLLF 297
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
55-384 3.04e-10

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 61.05  E-value: 3.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGR----VPVMAFGSLVCFVCGFlypvFTTVMPFLLLRLVHGFSTGFKPTGTsAYVADIVPA 130
Cdd:cd17504    40 YLLVGAVSTPILGRLGDLYGRkkvlLIVLAIYTAGSLLAAF----APNLPVLIAGRALQGIGGAVFPLAF-ALVREEFPP 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 131 NRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAIllnmketlkekqrlsvdAFKITRRDIFEP 210
Cdd:cd17504   115 ERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVAVLLAAL-----------------VPLIDLRLLRRR 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 211 DVLSPALITFLCYFGYGAVSTVTP-----DFSTYLGL--TNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVL 283
Cdd:cd17504   178 NVLLANITALLAGFGMFMVFQLLPqllqlPTPTGFGLgiTEAGLLLLPGALVMLIAGPLAGRLIARVGPRRVLLIGLVIS 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 284 T-CAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIA--TMFISLEAGIG---LGAFLSAGLFK 357
Cdd:cd17504   258 AvGLLLLALLHSSLWALVVALLLIGIGLGLAFASLPNIVVESVPPDRTGIATGmnTVLRTIGSAIGpaiAGAILTTYTVS 337
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1986780965 358 NQRENLP------LVFFSMAGFALAALAYTVTI 384
Cdd:cd17504   338 ITSGGVPtegayvLAFLIGAALALAALLLSLLI 370
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
65-379 1.60e-09

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 59.17  E-value: 1.60e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  65 FSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCM 144
Cdd:cd17475    50 PAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSVQPGGGRAIMRWFPPRERGLAMGIRQTGV 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 145 GVGSAFGPAIGSLISQAFSLNALFYT----SSFFAFLSIAILLNMKETLKEKQRLSVDAFKItRRDIFEPDVLSPALITF 220
Cdd:cd17475   130 PLGGALAAALLPPLALHYGWRAAFVVaglvSILAAVLFWLFYREPPAASAATESASTLLRSL-KEVLRNRDVWLIAIAGA 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 221 LCYFGYGAVSTVTPDFSTY---LGLTNRGYYFMVFTLFSILIRLFAGKISDQH-GRMPVTIAGCCVLTCAMIITGYA--- 293
Cdd:cd17475   209 LLVAPQFALLTFLLLFLHDhlgLSVVAAGALLAVAQLGGALGRIGLGRVSDRVfGGRRRPVLVITAAIAAAALLVLSlls 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILS--PVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLsAGLFKNQRENLPLVFFSMA 371
Cdd:cd17475   289 PGTPLWLLVLLLILLGLFAIGwnGLYLTLVAESAGPEQAGTALGLANTINFIGIAIGPPL-FGLLVDATHSYAPAWLALA 367

                  ....*...
gi 1986780965 372 GFALAALA 379
Cdd:cd17475   368 LLLVLAAL 375
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
49-379 1.65e-09

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 58.82  E-value: 1.65e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTV-MPFLLLRLVHGFSTGFKPTGTSAYVADI 127
Cdd:cd17355    41 SLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLwQLYLLWGLLGGGGAGTLAAVAFATVAAW 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 128 VPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSI--AILLNMKETLKEKQRLSVDAFKITRR 205
Cdd:cd17355   121 WFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGWRTALLVLALLALLVLvpVLLLLRRRPADLALRAYDDASPASPG 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 206 DIFEPDVLSP-----ALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIA 278
Cdd:cd17355   201 STLKEALRSAsfwllALAFFLCGFAVVGLIVHLVPYLADRGISPAaaAVALALIGLFNIVGRLLSGWLGDRYSPRRLLAA 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 279 GCCVLTCAMIITGYADSITLFLIG-AAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLsAGLFK 357
Cdd:cd17355   281 SYALRALGLALLLLLPFPPLALLLfAALFGLGWGATVPLTAALAARYFGARSYGTLFGLVFAPHQLGSALGPWL-GGLLY 359
                         330       340
                  ....*....|....*....|..
gi 1986780965 358 NQRENLPLVFFSMAGFALAALA 379
Cdd:cd17355   360 DRTGSYTAAWALAVALGLIAAL 381
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
49-384 2.32e-09

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 58.35  E-value: 2.32e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFG----SLVCFVCGFLypvfTTVMPFLLLRLVHGFSTGFKPTGTSAYV 124
Cdd:cd17319    41 GLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSmllwSLFTALTGFA----TSLTSLYVLRFLLGVAEAGFFPGAIKAL 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 125 ADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLnmketlkekqrlsvdafkitr 204
Cdd:cd17319   117 AEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLLLAVLWW--------------------- 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 205 rdIFEPDVLSPALITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFAGKISDQH---GRMPVTIA 278
Cdd:cd17319   176 --FYLRQVWGLALGYFGINYALYGLLTWLPTYlkqARGFSLKQVGLLAAIPFLAGAIGMILGGRLSDRLlrgARRLVIII 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 279 GCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMfislEAGIGLGAFLS---AGL 355
Cdd:cd17319   254 GLLLAAVGLLLAYLTTSPVVAVILLSLAGFGIGAASPVFWSLPADLLPGEAAATAGGLI----NSGGNLGGFVApllIGY 329
                         330       340
                  ....*....|....*....|....*....
gi 1986780965 356 FKNQRENLPLVFFSMAGFALAALAYTVTI 384
Cdd:cd17319   330 LVDATGSYTAAFLFLAAVALLAALLVLLL 358
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
216-379 3.15e-09

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 58.21  E-value: 3.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:cd06174     2 LLGFFLTGLARGLISPLLPALLQSFGLSASqlGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQRENLPLVFFSMAGF 373
Cdd:cd06174    82 PSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGWRAVFLIAAAL 161

                  ....*.
gi 1986780965 374 ALAALA 379
Cdd:cd06174   162 ALLAAI 167
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
216-382 3.76e-09

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 57.96  E-value: 3.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:COG2271    16 FLAYFLNYLDRSNLSVAAPPLQADLGLSAAqlGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQreNLPLVFFSMAGF 373
Cdd:COG2271    96 TSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAF--GWRAAFLILGLP 173

                  ....*....
gi 1986780965 374 ALAALAYTV 382
Cdd:COG2271   174 GLLLALLRF 182
MFS_1 pfam07690
Major Facilitator Superfamily;
216-380 5.23e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 54.35  E-value: 5.23e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDF-STYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGY 292
Cdd:pfam07690   2 FLAAFLAALGRSLLGPALPLLlAEDLGISPTeiGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 293 ADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFknQRENLPLVFFSMAG 372
Cdd:pfam07690  82 ASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLA--SLFGWRAAFLILAI 159

                  ....*...
gi 1986780965 373 FALAALAY 380
Cdd:pfam07690 160 LSLLAAVL 167
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
49-379 6.11e-08

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 54.07  E-value: 6.11e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAG-LSRP----FSGRLTDRIGRVPVMAFGSLV----CFVCGFLyPVFTTV---MPFLL--LRLVHGFSTG 114
Cdd:cd17369    42 GTLAAFATFGVGfLARPlggvVFGHFGDRIGRKKTLVLTLLLmgiaTFLIGLL-PTYAQIgilAPILLvlLRLLQGLALG 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 115 FKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNAL--------FYTSSFFAFLSIAILLNMK 186
Cdd:cd17369   121 GEWGGAVLMAVEHAPPKRRGFYGSFPQLGAPVGLLLATGVFLLLSALLSDEAFlswgwripFLLSAVLVAVGLYIRLRLE 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 187 ET------LKEKQRLSVDAFKITRRDIfepdvlSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGY-------YFMVFT 253
Cdd:cd17369   201 ETpvfrraKEAGQVVRAPLVEVLRRHW------RALLLAIGLRLAENVLFYLFTTFALSYATQTLGVdrstvllAVLIAS 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 254 LFSILIRLFAGKISDQHGRMPVTIAGCcvltCAMIITGYA--------DSITLFLIGAAFFGMAMGILSPVLSAWTVDLS 325
Cdd:cd17369   275 VVAAITIPLFGWLSDRVGRRPVYLAGA----LLAALFAFPffwlldtgSTWLIVLAAVVVLGVLHGMMYGPQAAFLAELF 350
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1986780965 326 GDNNR--GRAIATMFISLEAGiGLGAFLSAGLFKNQRENLPLVFFSMAGFALAALA 379
Cdd:cd17369   351 PTRVRytGASLGYQLGAILGG-GFAPLIATALVAATGSWWPVALYLAALAVISLVA 405
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
216-384 9.70e-08

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 52.89  E-value: 9.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLGLTNRGY--YFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:COG0477    20 ALGTFLEGLDFTIVNVALPSIAADLGASSAQLgwIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLA 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLfkNQRENLPLVFFSMAGF 373
Cdd:COG0477   100 PSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLL--VAALGWRWIFLINAPL 177
                         170
                  ....*....|.
gi 1986780965 374 ALAALAYTVTI 384
Cdd:COG0477   178 GLLALVLRLRL 188
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
122-378 1.30e-07

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 53.40  E-value: 1.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 122 AYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL------------------ 183
Cdd:cd17313   128 ALLPDLVPPEQRSKANGIINFMGGLGGVLGYLLGAILWDHNWFGFALGGNLKVPFYIGAIILlvcvlvtlffvkepplsp 207
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 184 NMKETLKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDF------------STYLGLTNRGYYFM- 250
Cdd:cd17313   208 EAGEHSENPSLGEVLKSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYmgeevyhgtsaaSSHYGAGVRMGAWGl 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 251 -VFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNN 329
Cdd:cd17313   288 lIFSLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSESG 367
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1986780965 330 RGR----AIATMFISLE---AGIGLGAFLSAGLFKNqrenlplVFFSMAGFALAAL 378
Cdd:cd17313   368 RGQgtdtGLLNLAISLAqilVSLLAGPIIDVKGYGT-------VFPVAAVASFLSL 416
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
30-334 1.43e-07

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 53.00  E-value: 1.43e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGgdyKGAIIGLFTLTAGL----SRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLL 105
Cdd:cd17390    14 MILPLLSTHIRSLGA---SPTVIGLIGSVYGAlqlfSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLS 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 106 RLVHGFstgFKPT--GTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQ--------------AFSLNAL-- 167
Cdd:cd17390    91 RIPLGI---FKHTqsLCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVGGHLAEtdggfyyvallcsaIFILNAGlv 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 168 -FYTSSFFAFLSIAILLNMKETLKEKQrlsvdaFKITRRDIFEpdvLSPALITFLCYFgYGAVSTVTPDFSTYLGLTNRG 246
Cdd:cd17390   168 wFLLSKLWDLLLVRFLMGFSVLLFRSN------FSLYLEERFD---LSPKTIGYLISY-SGVLGALSGFLVGRILKLYKN 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 247 YYFMVFTLFSILirlfagkisdqhgrmpvtiAGCCVLTCAMiitgyADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSG 326
Cdd:cd17390   238 NEYLLLLHSFIL-------------------LALSLLGLAL-----APSIWLLVLCLTPLSISSAVLRTCSTSLLLSRGK 293

                  ....*...
gi 1986780965 327 DNNRGRAI 334
Cdd:cd17390   294 SKERGTLL 301
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
216-384 1.73e-07

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 52.56  E-value: 1.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLG--LTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:cd17321     2 LLAVFLAALDVTIVNVALPTIARDLGasPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLfkNQRENLPLVFFSMAGF 373
Cdd:cd17321    82 PSLAFLIAARALQGIGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLL--LELFGWRWIFLINVPI 159
                         170
                  ....*....|.
gi 1986780965 374 ALAALAYTVTI 384
Cdd:cd17321   160 GLVALLLARTF 170
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
54-266 1.94e-07

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 52.61  E-value: 1.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  54 LFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRR 133
Cdd:PRK11102   34 AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEF 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 134 GEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIA-ILLNMKETLKEKQRLSVdAFKITRRDIF---- 208
Cdd:PRK11102  114 SRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAlVFFFIPETLPKERRQPF-HLRTTIRNFAslfr 192
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 209 EPDVLSPALITFLCYFGYGAVSTVTPdfSTYLGL-----TNRGYYFMVFTLFSILIRLFAGKI 266
Cdd:PRK11102  193 HKRVLGYMLASGFSFAGMFSFLTAGP--FVYIELngvspQNFGYYFALNIVFLFVMTIINSRF 253
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
35-183 2.48e-07

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 52.17  E-value: 2.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGG-DYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVhGFST 113
Cdd:cd17478   218 LPFYLVQRGYSlVFAGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSYILLVLA-GFLL 296
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1986780965 114 GFKPTGTSAYVADIVPaNRRGEAMGIH-GMCMGVGSAFGPAIGSLIsQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17478   297 FASFPVTVVLAQELLP-GNVGLASGLMmGLSFGLGGIGAPVLGALA-DAFGLESVLLILALLPLLGALLAF 365
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
36-186 2.73e-07

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 52.22  E-value: 2.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  36 PGYLSTMGGGDYK-GAIIGLFTLTAGLSRPFSGRL-TDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFST 113
Cdd:cd17490   219 PLIAKQLGASSFQlGLLSIIYLLPNALASLLSGTLfYKKLGERNTIIIGFLLLGAYCFLIPFAPNLTLLYLLQALNGFGT 298
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 114 GFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMK 186
Cdd:cd17490   299 GILFPLLMSLSIEGVPAEQRSTAMGFFQAIYALGMFLGPVLVGIISEAFGLQTGFFVIGVIALLAAILSLAYY 371
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
33-183 3.15e-07

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 51.85  E-value: 3.15e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  33 PELPGYLSTMGGGdykGAIIGLFTLtaglsrpfsGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFS 112
Cdd:cd06173   243 AAGYGLLLAAFGV---GALLGALLL---------GRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLA 310
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1986780965 113 TGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd06173   311 GGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGLSAVFLLAGALLLLAALLLL 381
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
29-183 3.67e-07

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 51.84  E-value: 3.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  29 NMLIPELPGYLSTMGGGD------YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPF 102
Cdd:PRK09874   31 SLVMPFLPLYVEQLGVTGhsalnmWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQF 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 103 LLLRLVHGFSTGFKPTGtSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAIL 182
Cdd:PRK09874  111 LILRALLGLLGGFVPNA-NALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVT 189

                  .
gi 1986780965 183 L 183
Cdd:PRK09874  190 L 190
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
216-393 3.93e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 51.86  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLG-LTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYAD 294
Cdd:cd06179     4 CLAYFAQLFGVTLPAAVLPFIVADLGpSSNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAK 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 295 SITLFLIGAAFFGMAMGIlSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQRENLPLVFFSMAGFA 374
Cdd:cd06179    84 SVNMLIGGQALIGIGAGT-QGLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVEANAAGWRWIFYINAIFN 162
                         170
                  ....*....|....*....
gi 1986780965 375 LAALAYTVTIYQFKKRRTR 393
Cdd:cd06179   163 ALALILLFFFYHPPPRPQL 181
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
65-323 4.56e-07

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 51.55  E-value: 4.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  65 FSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPaNRRGEAMGIHGMCM 144
Cdd:cd17333    50 LAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGLGAGILDTGANTFVGALFE-ESSATRLNVLHGFF 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 145 GVGSAFGPAI-GSLISQAFSLNALFYTSSFFAFLSIAILLNMK----ETLKEKQRLSVDAFKITRRDIFEPDVLSPALIT 219
Cdd:cd17333   129 GLGALIGPLIaTSLLTSELSWSWAYLIIGLIYLLLAILILLTLfpelPSARNPQQSVGAFSASASRLLRNPSIILGALAL 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 220 FLCYFGYGAVSTVTPDFSTYLGLTNR---GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSI 296
Cdd:cd17333   209 FLYVGAETAFSSWVPSYLVEKKHVSDglaGYLLSGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALLGLLILLLAPTL 288
                         250       260
                  ....*....|....*....|....*..
gi 1986780965 297 TLFLIGAAFFGMAMGILSPVLSAWTVD 323
Cdd:cd17333   289 VVGLVATALLGLFMAALFPTILSLGIS 315
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
64-221 7.69e-07

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 50.79  E-value: 7.69e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  64 PFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMC 143
Cdd:PRK10473   56 LFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGI 135
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1986780965 144 MGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAI-LLNMKETLKEKQRLSVDAFKITRRDIFEPDVLSPALITFL 221
Cdd:PRK10473  136 TCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLsLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTL 214
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
55-192 8.51e-07

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 50.84  E-value: 8.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGRVPVMaFGSLVCFVCG-FLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRR 133
Cdd:TIGR00711  46 YMLANAISIPLTGWLAKRFGTRRLF-LISTFAFTLGsLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKR 124
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 134 GEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTS---SFFAFLSIAILL-NMKETLKEK 192
Cdd:TIGR00711 125 GRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINvpiGIIVVVVAFFILpRDKPAASEN 187
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
49-198 8.62e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 50.67  E-value: 8.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVF--TTVMPFLLLRLVHGFSTGFKPTGTSAYVAD 126
Cdd:COG2211   267 GLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLgpGNLWLLLVLAALAGIGLGAILVLPWAMLAD 346
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 127 IVPA-------NRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNA---------------LFYTSSFFAFLSIAILLN 184
Cdd:COG2211   347 VVDYdewktgrRREGLYFGIFTFAIKLGQALAGALAGLLLALFGYVAgaaqspsaltgirllFFLLPAVLLLLAALLLLF 426
                         170
                  ....*....|....
gi 1986780965 185 MKETLKEKQRLSVD 198
Cdd:COG2211   427 YPLTRERHAEIRAE 440
MFS_MFSD14 cd17387
Major facilitator superfamily domain-containing 14A and 14B; This subfamily is composed of ...
49-223 9.20e-07

Major facilitator superfamily domain-containing 14A and 14B; This subfamily is composed of major facilitator superfamily domain-containing 14A (MFSD14A) and MFSD14B, and similar proteins. MFSD14A and MFSD14B are also called hippocampus abundant transcript 1 protein (HIAT1) and hippocampus abundant transcript-like protein 1 (HIATL1), respectively. They are both ubiquitously expressed with HIAT1 highly expressed intestis and HIATL1 most abundantly expressed in skeletal muscle. Gene disruption of MFSD14A causes globozoospermia and infertility in male mice. It has bee suggested that MFSD14A may transport a solute from the bloodstream that is required for spermiogenesis. The function of MFSD14B is unknown. The MFSD14 subfamily belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340945 [Multi-domain]  Cd Length: 410  Bit Score: 50.50  E-value: 9.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMafgslvcfvcgfLYPVFTTVMPFLLLRL-------VHGFSTGFKPTGTS 121
Cdd:cd17387    39 GLVQGVKGILSFLSAPLIGALSDVWGRKSFL------------LLTVFFTCAPIPLMRIspwwyfaMISVSGIFSVTFSV 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 122 --AYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIA-ILLNMKETLKEKQR---- 194
Cdd:cd17387   107 ifAYVADITTEEERSTAYGLVSATFAASLVTSPALGAYLSESYGDNLVVLVATIVALLDICfILLAVPESLPEKMRpasw 186
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1986780965 195 ------LSVDAFKITRRDIFEPDVLSPALITFLCY 223
Cdd:cd17387   187 gapiswEQADPFASLRKVGKDKTVLLICITVFLSY 221
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
35-183 9.37e-07

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 50.26  E-value: 9.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGsLVCFVCGF-LYPVFTTVMPFLLLRLVHGF 111
Cdd:cd17473   220 LPFLLQERGGGSAAliGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIG-FALMALGFlLLALASGLWVVLLGAILAGL 298
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 112 STGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAI-GSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17473   299 GFGLLLPTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVlGPLVNLTGGLSGAFLILGVLALVLAIVLL 371
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
48-183 1.08e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 50.26  E-value: 1.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  48 KGAIIGLFTLTAGLSRPFSGRLTD-RIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVAD 126
Cdd:cd17474   236 IGLLFAGWSVLLALGSLFVGRLLKkRFGARRILVIGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTE 315
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 127 IVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17474   316 LAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAAIALAAAVLLA 372
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
38-183 1.36e-06

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 49.86  E-value: 1.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  38 YLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGF 115
Cdd:cd17324   224 FLTDVPGFSSSaiIGLLLLFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFA 303
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1986780965 116 KPTGTSAYVADIVPANRrGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17324   304 AHSALQTRVLRLAPEAR-GLASSLYLAAYNLGGALGAALGGLVLDHGGWAGVGWVGAALLLLALLLAL 370
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
210-394 2.27e-06

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 49.08  E-value: 2.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 210 PDVLSPALITFLCYFGYGAV----STVTPDFSTYLGLTNRGYYFMVFTLF--SILIRLFAGKISDQHGRMPVTIAGCCVL 283
Cdd:COG0738     4 KNYRRALIAIYLLFFLWGFAtalwGPLIPALKDAFGLSDAQAGLLLFAFFlgYLLASLPAGRLIDRFGYKRGLLLGLLLM 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 284 TCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGR-AIATMFISLeaGIGLGAFLSAGLFKNQREN 362
Cdd:COG0738    84 ALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRlNLLHAFFSL--GALLGPLLGGLLILLGLSL 161
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1986780965 363 LPLVFFSMAGFALAALAYTVTIYQFKKRRTRA 394
Cdd:COG0738   162 SWHLPYLILAVLLLLLALLFLRSKLPEIEEEE 193
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
35-337 2.78e-06

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 48.71  E-value: 2.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLV----CFVCGFlypvfTTVMPFLLL-RLVH 109
Cdd:cd17502    19 LPTIVAEFGGLSLVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIfelgSLLCGL-----APNMTMLIVgRAIQ 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 110 GFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILlnmketl 189
Cdd:cd17502    94 GIGGGGLMSLAFIIIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFYINLPIGGLALALL------- 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 190 kekqrlsvdafkitrrdifePDVLSPALITFLCYFGYGAVSTVTPDF---STYLGLTNRGYYFMVFTLFSILIRLFAGKI 266
Cdd:cd17502   167 --------------------RTILLSSIFGFLFGGALFGLIYYLPLYfqlVLGDSATKSGVRLLPLIIGLVIGSIISGAL 226
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1986780965 267 SDQHGR-MPVTIAG--CCVLTCAMIITGYADSITLFLIGAAF-FGMAMGILSPVLSAWTVDLSGDNNRGRAIATM 337
Cdd:cd17502   227 ISKTGRyKPLIVIGtiLMSVGAGLLTTLTLDTSKWLLIGYLIlLGLGLGIGFQQPLVAVQNAVPPADVGVATATN 301
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
65-183 3.53e-06

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 48.73  E-value: 3.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  65 FSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGI-HGMC 143
Cdd:cd17335   252 FSSRLIQRFGHVGLLYLGLLAYVVRWLLYSFLENPWLVLPIELLHGLTFALVWAAAVSYASAAAPPGLRATAQGLlQGLY 331
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1986780965 144 MGVGSAFGPAIGSLISQAFSLNALFytsSFFAFLSIAILL 183
Cdd:cd17335   332 FGLGGGLGSLIGGYLYEAFGARTTF---RFFAIAALAGLL 368
MFS_SLC18A1_2_VAT1_2 cd17384
Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major ...
61-357 4.16e-06

Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily; Vesicular amine transporter 1 (VAT1 or VMAT1) is also called solute carrier family 18 member 1 (SLC18A1) or chromaffin granule amine transporter, while VAT2 (or VMAT2) is also called SLC18A2, synaptic vesicular amine transporter, or monoamine transporter. VATs (or VMATs) are responsible for the uptake of cytosolic monoamines into synaptic vesicles in monoaminergic neurons. VAT1 and VAT2 distinct pharmacological properties and tissue distributions. VAT1 is preferentially expressed in neuroendocrine cells and endocrine cells, where it transports biogenic monoamines, such as serotonin, from the cytoplasm into the secretory vesicles. VAT2 is primarily expressed in the CNS and is involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. VATs belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340942 [Multi-domain]  Cd Length: 373  Bit Score: 48.34  E-value: 4.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  61 LSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPAN-RRGEAMGI 139
Cdd:cd17384    46 ITNPIVGPLTNRIGYSLPMFVGFVIMFISTLLFAFGESYGVLFLARALQGVGSACSSVAGMGMLASLYPDDkERGKAMGI 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 140 --HGMCMGVgsAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAI-LLNMKETLKEKQRLSVDAFKITRRDifePDVLSPA 216
Cdd:cd17384   126 alGGLALGV--LVGPPFGGVMYEFVGKSAPFLILAFLALLDGALqLFILQPSVKSEESEEGTPWKTLLKD---PYILIAA 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 217 LITFLCYFGYGAVSTV--------------------TPDFSTYLGLTNrgyyfmvftlfsilirlFAGKISDQHGRMPVT 276
Cdd:cd17384   201 GAICFSNSGIAILEPClpiwmmetmcppkwqlgtafLPDSIGYLIGTN-----------------LFGPLAHKIGRWLCS 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 277 IAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGI----LSPVLsAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLS 352
Cdd:cd17384   264 LLGMLLVGISLILIPLAKNIYGLIIPHFGLGLGIGMvdssMMPLL-AYLVDLRHSSVYGSVYAIADVAFCLAFALGPSLG 342

                  ....*
gi 1986780965 353 AGLFK 357
Cdd:cd17384   343 GAIVK 347
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
216-384 4.78e-06

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 47.96  E-value: 4.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFST-YLGLTNRGYYF-MVFTLFSILIRLFA---GKISDQHGRMPVTIAGCCVLTCAMIIT 290
Cdd:cd17330     2 FLVVFLDALGFGIVFPVLPFYVReFNKLGASGYYVgLLQSSYSLGQFLASplwGRLSDRYGRKPVLLLSLAGSAVSYVLL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 291 GYADSITLFLIGAAFFGMAMGILSPVLSAWTvDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFKNQRENLPLVFfsM 370
Cdd:cd17330    82 GLSRNLWLLFLARFLDGLTGGNVSVAQAYIA-DITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLV--A 158
                         170
                  ....*....|....
gi 1986780965 371 AGFALAALAYTVTI 384
Cdd:cd17330   159 AALALLNLVLVLFF 172
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
61-183 8.95e-06

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 47.16  E-value: 8.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  61 LSRPFSGRLTDR--IGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMG 138
Cdd:cd17352   233 VGRILLGLLADKprIGRLYLYIFTLLILGLSLLAFPLATTYVGLIVFSVLFGFCSGSYSSLTPVILADLVGLEKLSNAYG 312
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1986780965 139 IHGMCMGVGSAFGPAI-GSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17352   313 LVLLFQGLAALVGPPIaGLLRDYTGDYDAAFYFCGACLLLSGVLLF 358
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
67-338 1.06e-05

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 47.37  E-value: 1.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  67 GRLTDRIGRVPVMAFG----SLVCFVCGFLyPVFTTVMP-----FLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAM 137
Cdd:cd17368    61 GAYADRIGRKPAMTLTlaimALGTLLIALA-PTYATIGIaapllVLLARLLQGFAAGGEVGGVTAYLVEAAPPGRRGFYT 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 138 GIHGMCMGVGSAFGPAIGSLISQAFSLNAL----FYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIFEpdVL 213
Cdd:cd17368   140 SWQSASQQVAIVAGALVGYLLSLTLTAEALaewgWRIPFFIGLLIIPLGLWLRRSLEETEAFLERKARPTRRELFA--LL 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 214 SPALITFLCYFGYGAVSTVTPDFSTYLGLT--------NRGYYFMVFTLFSI---LIRLFAGKISDQHGRMPVTIagccV 282
Cdd:cd17368   218 ANNRRIILLGMLLVAGSTVTFYFTTVYTPTyaktvlglSARDSFLVTLLAGVanfIWAPLGGALSDRIGRRPVLL----V 293
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1986780965 283 LTCAMIITGY--------ADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMF 338
Cdd:cd17368   294 ITLAALVTLYpvfawltaAPSFGRLLLVLLVLSFFFGMYGGAMVVALVELFPVRVRSTGFSLVY 357
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
55-162 1.40e-05

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 46.85  E-value: 1.40e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGRVPVMAFG----SLVCFVCGFLYPVFTtvmpFLLLRLVHGF-STGFKPTGTSaYVADIVP 129
Cdd:cd17328    43 FIISYMVLSPIFGYLGDRYNRKWILAVGiliwSAATLLSSFAPNFWQ----LLLFRALVGIgEASYSPIAPT-IIADLFP 117
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1986780965 130 ANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAF 162
Cdd:cd17328   118 KEKRTRALGVFYFAIPLGSGLGYVVGGLVAQAT 150
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
35-183 1.48e-05

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 46.44  E-value: 1.48e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGG--GDYKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFS 112
Cdd:cd17316   200 LPTYLQTVLGlsPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSPTLLLLLLFILS 279
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1986780965 113 -TGFKPTGTS-AYVADIVPANRRGEAMGI-HGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17316   280 fFVGGVWGALyAYLAELFPTEVRATGVGLsYNLGRLGGGGAPPLIALLLASTGGTGVPALILALLAIVALIVAL 353
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
52-185 1.94e-05

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 46.41  E-value: 1.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  52 IGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPAN 131
Cdd:cd17323    40 VSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPE 119
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 132 RRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTS---SFFAFLSIAILLNM 185
Cdd:cd17323   120 ERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWIFWFLaiiSGFCLILIFLFLPI 176
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
65-353 2.04e-05

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 46.20  E-value: 2.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  65 FSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCM 144
Cdd:TIGR00895  71 FFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGY 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 145 GVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAIL----------LNMKETLKEKQRLS------------------ 196
Cdd:TIGR00895 151 PIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLmrflpesidfLVSKRPETVRRIVNaiapqmqaeaqsalpeqk 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 197 --VDAFKITRRDIFEPDVLSPALITFLCYF----GYGAVSTVTPDFSTYLG--LTNRGYYFMVFTLFSILIRLFAGKISD 268
Cdd:TIGR00895 231 stQGTKRSVFKALFQGKTARITVLLWLLYFmllvGVYFLTNWLPKLMVELGfsLSLAATGGALFNFGGVIGSIIFGWLAD 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 269 QHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFisleaGIG-L 347
Cdd:TIGR00895 311 RLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI-----GIGrL 385

                  ....*.
gi 1986780965 348 GAFLSA 353
Cdd:TIGR00895 386 GAIIGP 391
MFS_BCD_PucC-like cd06176
Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator ...
49-355 3.06e-05

Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily; The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 349950 [Multi-domain]  Cd Length: 409  Bit Score: 45.57  E-value: 3.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAgLSRPFSGRLTDRIG-----RVPVMAFGSLVCFVCGFLYPVFTTVMPF----------LLLRLVHGFST 113
Cdd:cd06176    39 GLLIALHYLVA-PLRVWIGHRSDTHPlrgyrRTPYIWLGMLLLALGLALAPFAALLLAGaafwlglalaVLAFLLYGIGV 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 114 GFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFS---LNALFYTSSFFAF-LSIAILLNM---- 185
Cdd:cd06176   118 GAAGTAFLALLADLTPEERRPRAVTVVWTMLILGIIVTAIVFGRLLDPYSperLIQVFQIVALVALlLALLALWGVerrr 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 186 -KETLKEKQRLSvDAFKITRRDIF-EPDVLSPALITFLCYFGY-----------GAVSTVTPDFSTYLGLTNRGYYFMVF 252
Cdd:cd06176   198 sRAALAAEEAPP-ETFREALRLLWaSPQARRFFIFLFLSTLALfmqdvilepfgGEVFGMSVGETTRLTAIWGGGTLLGM 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 253 TLFSILIRLFAGKISdqhgrmpVTIAGCCVLTCAM---IITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNN 329
Cdd:cd06176   277 LLAGFLLSRRLGKKR-------TAALGCLLSALGFlllALAGLLGNPWLFRPGVFLLGLGNGLFTVGALTLMMDLTGEGT 349
                         330       340
                  ....*....|....*....|....*.
gi 1986780965 330 RGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:cd06176   350 AGLFMGLWGAAQALARGLGTLLGGAL 375
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
227-394 3.56e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 45.62  E-value: 3.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 227 GAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAA 304
Cdd:cd17478    13 GFLPALLPLLIAKLGLSYAqaGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 305 FFGMAMGILSPVLSAWTVDLSGdNNRGRAIATMFISLEAGIGLGAFLSAGLFkNQRENLPLVFFSMAGFALAALAYTVTI 384
Cdd:cd17478    93 LAGIGSAAFHPEGARLASQAAG-GRRGLAMSIFSVGGNLGFALGPLIAAALV-ALFGGLGLLILLIIPGLAVALLLLRLR 170
                         170
                  ....*....|
gi 1986780965 385 YQFKKRRTRA 394
Cdd:cd17478   171 PLKKPEAKKA 180
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
35-183 3.73e-05

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 45.25  E-value: 3.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYKG-----AIIGLFTLTAGLsrpFSGRLTDRIG----RVPVMAFGSLVCFVCGFLYPVFTTVMPFLLL 105
Cdd:cd17319   202 LPTYLKQARGFSLKQvgllaAIPFLAGAIGMI---LGGRLSDRLLrgarRLVIIIGLLLAAVGLLLAYLTTSPVVAVILL 278
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1986780965 106 RLVHGFSTGFKPTgTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGP-AIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17319   279 SLAGFGIGAASPV-FWSLPADLLPGEAAATAGGLINSGGNLGGFVAPlLIGYLVDATGSYTAAFLFLAAVALLAALLVL 356
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
64-319 4.04e-05

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 45.29  E-value: 4.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  64 PFSGRLTDRIGRVPVMAFGSLVCFVCGFLYpVFTTVMPFLLL-RLVHGFSTGFKptGTSAYVADIVPANRRGEAMGIHGM 142
Cdd:cd17331    53 PLFGRFGDLFGPRAALVLSFLSSALSYLLL-AFASSVPMLFLsRLPSVFMHAMQ--AAQMVVTDLTDPGERAAALGRLGL 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 143 CMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIFE----------PDV 212
Cdd:cd17331   130 SYGIGMVVGSFLGGLLTKKFGEQAAALVAAVGSLLSIVLVILLIPSNTKSKREKEAKESASPPSVFNlkeilrllrlPGV 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 213 LSPALITFLCYFGYGAVSTVTPDFST-YLGLTNR--GYYFMVFTLFSILIRLF-AGKISDQHGRMPVTIAGCCVLTCAMI 288
Cdd:cd17331   210 AFLLLVKLLSGLPIGMFQSMFSLVAMdFFGLTPEenGYLMSYAGVLGMVVQGLlVGPLTKRFGERSLLKLSVALLAIGYL 289
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1986780965 289 ITGYADSITLFLIGAAFFGMAMGILSPVLSA 319
Cdd:cd17331   290 LLAFVTTVWQLLVLLLPLVIGGSVLYTVITS 320
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
55-177 4.34e-05

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 45.31  E-value: 4.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  55 FTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAyVADIVPANRRG 134
Cdd:cd06179    41 WSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGIGAGTQGLGAAV-ASELVPNKYRG 119
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1986780965 135 EAMGIHGMCMGVGSAFGPAIGSLISQA--------FSLNALFYTSSFFAFL 177
Cdd:cd06179   120 LVQGVVNLVASPGSALGPLIAGALVEAnaagwrwiFYINAIFNALALILLF 170
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
261-355 4.57e-05

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 44.88  E-value: 4.57e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 261 LFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFIS 340
Cdd:cd17365    52 LLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSLAVTLMFCG 131
                          90
                  ....*....|....*
gi 1986780965 341 LEAGIGLGAFLSAGL 355
Cdd:cd17365   132 YPLGAALGGFLAAAL 146
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
49-311 4.66e-05

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 45.14  E-value: 4.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIG-RVPVMAFGSLVCFVCGFLYPVFT--TVMPFLLLRLVHGFSTGFKPTGTSAYVA 125
Cdd:COG2270    55 GYALAIAGLLVALLAPVLGAIADRSGrKKPFLAFFTLLGVLATAALFFVApgGLWLGLLLFVLANIGFEGSLVFYNAFLP 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 126 DIVPANRRGEAMGIhgmcmgvGSAFGpAIGSLISQAFSLnALFYTSSFF-----------AFLSIAI---------LLNM 185
Cdd:COG2270   135 DIATPEEIGRVSGL-------GWALG-YLGGVLLLLINL-ALFLKPEAFglpdageavriSFLLTALwwllfalplFLFL 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 186 KETLKEKQRLSVDAFKI-------TRRDIFEPDVLSPALITFLCY-FGYGAVSTVTPDF-STYLGL--TNRGYYFMVFTL 254
Cdd:COG2270   206 PERPRPGPAPPRGAVRAgfrelrrTLRELRRYRDLLRFLLAYFFYrDGVQTVIAFAGIYaAGVLGFstTELIVFGLLVQI 285
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 255 FSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMG 311
Cdd:COG2270   286 VAALGALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAFWILGLLIGLVMG 342
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
54-382 5.08e-05

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 44.91  E-value: 5.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  54 LFTLTAGLSRPFSGRLTDRIGRVPVMAFGSlVCFVCGFLYPVFTT--VMPFLLLRLVHGFSTGFKPTGTSAYVADIVPaN 131
Cdd:cd17353    46 LTIVFLAISAPFAGRLVDRGGPRKAILIGG-ILFGLGFILSAFAIslPLLFLGYGVLGGIGAGIGYITPVSTAVKWFP-D 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 132 RRGEAMGIHGMCMGVGSA-FGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETLKEKQRLSVDAFKITRRDIFEP 210
Cdd:cd17353   124 KRGLATGIVIAGFGLGSLiFSPLIAYLINTVGVPTTFLILGIIFLIIIVIGAFLIRDPPKGWVPPGVDPLANNAENSPRD 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 211 DVLSPALIT------FLCYFG--------YGAVSTVTPDFsTYLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVT 276
Cdd:cd17353   204 YTPREMLRTptfwllWLMFFLnataglmlIGQAKPIGQEF-AGLDAGIAALAVSILSIFNGGGRPFWGWLSDKIGRKNTL 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 277 IAGCCVLTCAM-IITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:cd17353   283 SIAFLIQGVAMfLLPFIGSVAVLFVLGVALIGFCYGGGFALFPALTADFFGTKNAGTNYGLLYTAKGVGGLIGPIIAAYV 362
                         330       340
                  ....*....|....*....|....*..
gi 1986780965 356 FKNQRENLPLVFFSMAGFALAALAYTV 382
Cdd:cd17353   363 LYTGGYNAAFIIAAALSLVALALALLL 389
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
61-278 6.22e-05

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 44.98  E-value: 6.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  61 LSRP----FSGRLTDRIGR-------VPVMAFGSLVCFVC------GFLYPVFttvmpFLLLRLVHGFSTGFKPTGTSAY 123
Cdd:cd17367    51 LMRPiggwLFGRLADRIGRraaltlsVSLMAAGSLVIAVTptyatiGIWAPII-----LLLARLLQGLSVGGEYGTSATY 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 124 VADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNAL--------FYTSSFFAFLSIAILLNMKETLKEKQRL 195
Cdd:cd17367   126 LSEVAPPGRRGFYSSFQYVTLIGGQLLALGVLLVLQHTLGEDQMaawgwripFLLGGVLAVVVLWLRRGLEETESFEAIA 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 196 SVDAFKITRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLT---NRGYYFMVFTLFSILIRL---FAGKISDQ 269
Cdd:cd17367   206 ESNEASAGTLRELRRHPRELLLVVGLTAGGTLAFYTWTTYLQKFLVNTagfSKGDATWITTAALLVFMLlqpLGGRLSDR 285

                  ....*....
gi 1986780965 270 HGRMPVTIA 278
Cdd:cd17367   286 IGRRPLLLF 294
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
47-188 6.89e-05

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 44.49  E-value: 6.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  47 YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVAD 126
Cdd:cd17315    35 LQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVLVPLYISE 114
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1986780965 127 IVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLN--ALFYTSSFFAFLSIAILLNMKET 188
Cdd:cd17315   115 IAPAKIRGALGTLNQLMITFGILLAYLLGLALSLSPPGWwrLMFALAAVPALLQLLLMFFLPES 178
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
49-355 7.70e-05

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 44.29  E-value: 7.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:TIGR00881  33 GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWF 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSL-ISQAFSLNALFYTSSFFAFL-SIAILLNMKETLKEKQRLSVDAFKI---- 202
Cdd:TIGR00881 113 SRSERGTWVSFWNCSHNVGGGLLPPLVLFgIAELYSWHWVFIVPGIIAIIvSLICFLLLRDSPQSCGLPPAEEMPNeepd 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 203 ----------TRRDIFEPDVLSPALITFLCyFGYGAVSTVTPDFSTY----------LGLTNRGYYFMVFTLFSILIRLF 262
Cdd:TIGR00881 193 gdaekkeeelTKKQIFLQYVLLNKVLWYIS-LGYVFVYVVRTGILDWsplyltqekgFSKEKASWAFTLYELGGLVGTLL 271
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 263 AGKISDQ---HGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFI 339
Cdd:TIGR00881 272 AGWLSDKlfnGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFV 351
                         330
                  ....*....|....*.
gi 1986780965 340 SLEAGIGlGAFLSAGL 355
Cdd:TIGR00881 352 GFFAYLG-GILAGLPL 366
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
9-167 8.63e-05

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 44.09  E-value: 8.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965   9 IFTTQFWLLGLSSFLFSSSFNMLIPELPGYLSTMGGGD--YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVC 86
Cdd:cd17321   165 LLARTFSGAVLAAFLLGAALGGLLFLLPLYLQGVLGYSplQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAGLLLT 244
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  87 FVCGFLYPVF---TTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFS 163
Cdd:cd17321   245 AVGLLLLALLgadSSVWLLLPGLVLLGLGLGLFATPLTNAALSSVPKEKAGAASGILNTARQLGGALGVALLGALLTAGL 324

                  ....
gi 1986780965 164 LNAL 167
Cdd:cd17321   325 SANL 328
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
54-183 9.95e-05

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 44.08  E-value: 9.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  54 LFTLTAGLSRPF---SGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPa 130
Cdd:cd17471   240 LFGLAAALEIPImllAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQLLNAIFIGITAGLGISYFQDLMP- 318
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1986780965 131 NRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17471   319 GQPGLATTLYSNASRIGSLLGGLLAGVIAQYFGYRAVFLVCAVLALLALVLLL 371
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
35-185 1.13e-04

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 43.76  E-value: 1.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYK--GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGsLVCFVCGFL-YPVFTTVMPFLLLRLVHGF 111
Cdd:cd17329   223 LPVYVVEILGLGESllGLLLALNALLIVLLQFPVARLVERFRLRKILMIG-ILLFAIGFAvLAFANTLAVLILAMIVLTL 301
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1986780965 112 STGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNM 185
Cdd:cd17329   302 GEMLVFPAVQTLVAALAPPDKRGSYMGFYALAWGLGRAIGPLVGGLLLDLLGPGLPWLILAALGLIAAALLLGL 375
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
228-395 1.16e-04

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 44.09  E-value: 1.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 228 AVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAF 305
Cdd:COG2807    36 SVGPLLPEIRADLGLSATqaGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTAL 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 306 FGMAMGILSPVLSAWtVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFknQRENLPLVFFSMAGFALAALAytVTIY 385
Cdd:COG2807   116 IGAGIAVGNVLLPGL-IKRWFPDRVGLMTGLYTAAMGLGAALAAGLTVPLA--AALGWRGALAVWALLALLALL--LWLP 190
                         170
                  ....*....|
gi 1986780965 386 QFKKRRTRAV 395
Cdd:COG2807   191 LLRRRPAAAA 200
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
261-311 1.19e-04

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 43.86  E-value: 1.19e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1986780965 261 LFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMG 311
Cdd:PRK10473   56 LFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAG 106
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
11-183 1.30e-04

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 43.80  E-value: 1.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  11 TTQFWLLGLSSFLFSSSFNMLIPELPGYLSTMGGGDYKGA-IIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVC 89
Cdd:cd17355   209 SASFWLLALAFFLCGFAVVGLIVHLVPYLADRGISPAAAAvALALIGLFNIVGRLLSGWLGDRYSPRRLLAASYALRALG 288
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  90 GFLYPVFTTVMPFLLL-RLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLI-SQAFSLNAL 167
Cdd:cd17355   289 LALLLLLPFPPLALLLfAALFGLGWGATVPLTAALAARYFGARSYGTLFGLVFAPHQLGSALGPWLGGLLyDRTGSYTAA 368
                         170
                  ....*....|....*.
gi 1986780965 168 FYTSSFFAFLSIAILL 183
Cdd:cd17355   369 WALAVALGLIAALLVL 384
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
61-183 1.47e-04

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 43.31  E-value: 1.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  61 LSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVF--TTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMG 138
Cdd:cd17380    49 LTQVLGGYLADRFGGKKVLLLAVALWSLATLLTPLLaySSLPLLILSRILLGLGEGVHFPSMTSLFSRWVPVSERSRAVS 128
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1986780965 139 IHGMCMGVGSAFGPAIGSLISQAFSLNALFYtssFFAFLSIAILL 183
Cdd:cd17380   129 IVTAGSYLGTLLGGLIGPLLLEYYGWPSVFY---FFGLLGLLWAL 170
MFS_MCT_like cd17314
Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator ...
50-183 1.68e-04

Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator Superfamily; The group is composed of the Monocarboxylate transporter (MCT) family in animals and similar transporters from fungi, plants, archaea, and bacteria. MCT is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCTs have been found to facilitate the transport across the plasma membrane not only of monocarboxylates (MCT1-4), but also thyroid hormones (MCT8/10), and aromatic acids (MCT10). Yeast MCT homologous (Mch) proteins are not involved in the uptake of monocarboxylates; their substrates are not known. The MCT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340872 [Multi-domain]  Cd Length: 385  Bit Score: 43.55  E-value: 1.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  50 AIIGLFTltaGLSRPFSGRLTDRIG---RVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVAD 126
Cdd:cd17314   249 SIYGLFN---AFGRLLWGIVADFFGgrlSTLSILLTILGLGLCAFLFLLKMTPVGLVLTGSLLGFSYGGLFTVYPATVST 325
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1986780965 127 IVPANRRGEAMGIHGMCMGVGSAFGPAIGSLI-SQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17314   326 VFGTESFATLYGILLFAPAIGSILGPMLGAKFyDRTPSYISAVYIYAVIVFLASAILL 383
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
67-183 1.71e-04

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 43.60  E-value: 1.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  67 GRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGfkPTGTS--AYVADIVPANRRGEAMGIHGMCM 144
Cdd:COG2270   295 GRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAFWILGLLIGLVMG--GIQALsrSLLARLIPPGREAEFFGLYALSG 372
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1986780965 145 GVGSAFGPAIGSLISQAFSlnalfytSSFFAFLSIAILL 183
Cdd:COG2270   373 KAASFLGPLLFGLVTQLTG-------SQRLGILSLIVFF 404
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
248-355 2.26e-04

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 43.11  E-value: 2.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 248 YFMVFTLFSILI-RLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSG 326
Cdd:TIGR00895  56 FLFSAGLIGMAFgALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAP 135
                          90       100
                  ....*....|....*....|....*....
gi 1986780965 327 DNNRGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:TIGR00895 136 KRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
216-355 2.28e-04

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 42.94  E-value: 2.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 216 ALITFLCYFGYGAVSTVTPDFSTYLGLT--NRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITGYA 293
Cdd:cd17474     5 FFATLLAVLGVSIVDPILPAIAEALGASpaQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLS 84
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1986780965 294 DSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:cd17474    85 DSFALLLAGRALQGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLL 146
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
49-134 2.40e-04

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 42.94  E-value: 2.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFtltaglsrpFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:cd17359    48 GAAIGAL---------FAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASALVPMYIAEVA 118

                  ....*.
gi 1986780965 129 PANRRG 134
Cdd:cd17359   119 PAEIRG 124
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
52-169 4.29e-04

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 42.19  E-value: 4.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  52 IGLFTLTAGLSrpFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPAN 131
Cdd:cd17365    42 AALFGMAIGAL--LAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPAR 119
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1986780965 132 RRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFY 169
Cdd:cd17365   120 RRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFL 157
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
64-159 5.87e-04

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 41.41  E-value: 5.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  64 PFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMC 143
Cdd:cd17317    43 LLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSFVGILFGLF 122
                          90
                  ....*....|....*.
gi 1986780965 144 MGVGSAFGPAIGSLIS 159
Cdd:cd17317   123 WALGYMLLALLAYLIR 138
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
49-312 6.06e-04

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 41.84  E-value: 6.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFG----SLVCFVCGFLYPVFTTVMPFLLLRLVHGFstgFKPTGTSAYV 124
Cdd:cd17345    41 GLIGSALSIAYGLSKFVMGNLSDRSNPKRFLAIGlilsAIINILIGFVPSATSSVGLMFILLFLNGW---FQGMGWPPSG 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 125 ADIV---PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAF---SLNALFYTSSFFAFL-SIAILLNMKET--------- 188
Cdd:cd17345   118 RTMVhwfSKKERGTWTSIWNISHNVGGGLVGPLAGLGLAIFgdgWWRGAFIFPAIIAIIvAVIVLFLGKDTpeseglppi 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 189 ------LKEKQRLSVDAFKITRRDIFEPDVLSPALITFLCYFG-------YGAVSTVTPDFSTYLGLTNRG--YYFMVFT 253
Cdd:cd17345   198 eeykgdYPEEADGEEEEQELSAWEIFVKYVLKNKLLWYIAIANvfvylvrYGILDWAPTYLSEVKGFSKAQamWAFSLFE 277
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 254 LFSILIRLFAGKISDQ--HGRMPVTIAGCCVLTCAMIIT------GYADSITLFLIGAAFFGMAMGI 312
Cdd:cd17345   278 WAAIPGTLLAGWLSDKlfKGRRAPTGIIFMILVIVALIVywlapnVLVDLIALIALGFLIYGPVMLI 344
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
30-155 6.67e-04

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 41.57  E-value: 6.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  30 MLIPELPGYLSTMGGGDYKGAIIGLFTLTAG-LSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLV 108
Cdd:TIGR00895 268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGvIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAI 347
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1986780965 109 HGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIG 155
Cdd:TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
219-356 7.60e-04

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 41.52  E-value: 7.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 219 TFLCYFGYGA-------VSTVTPDFSTYLGLTN--RGYYFMVFTLFSILIRLFAGKISDQHGRMPV---TIAGCCVLTCA 286
Cdd:cd17371     1 FWAAFLGWALdgfdlllLGLVLPALIAEFGLDEaeAGLLGTVTLAGGAIGGILGGILADRFGRVRVlviTILLFAVFTLL 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 287 miiTGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGLF 356
Cdd:cd17371    81 ---CGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLF 147
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
35-183 8.82e-04

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 41.13  E-value: 8.82e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGDYKGAIIGLFTLTAG--LSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLY---PVFTTVMPFLLLRLvh 109
Cdd:cd17371   232 LPSYLTGERGLSFEGSAGYLVVTILGgfLGYLAGGFLADRIGRRNNFALFALGSAISILLYfflPLSPTLILILGFPL-- 309
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 110 GFSTGFKPTGTSAYVADIVPANRRGEAMGIhgmCMGVG---SAFGPAIGSLISQAFSLN---ALFYTSSFFAFLSIAILL 183
Cdd:cd17371   310 GFFASGPFSGMGAYLTELFPTAVRATAQGF---CYNVGriiGALFPFLVGFLATSGSLGtaiAVFAAVYYIAGLVLALLL 386
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
67-194 1.13e-03

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 40.97  E-value: 1.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  67 GRLTDRIGRVPVMAFGSLVcFVCGFLYPVFTTVMP-FLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMG 145
Cdd:PRK15403   72 GPLSDRIGRRPVLITGALI-FTLACAATLFTTSMTqFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVL 150
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1986780965 146 VGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIA-ILLNMKETLKEKQR 194
Cdd:PRK15403  151 VAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVgLLLAMPETVKRGAV 200
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
212-355 1.29e-03

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 40.66  E-value: 1.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 212 VLSPALITFLCYFGYGAVSTVTP----DFSTYLGLTNRGYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAM 287
Cdd:cd17316     1 LLLAGLGWFFDAYDFFLIGFVAPvlaaEFSLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1986780965 288 IITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLEAGIGLGAFLSAGL 355
Cdd:cd17316    81 LLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLL 148
Sugar_tr pfam00083
Sugar (and other) transporter;
49-381 1.38e-03

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 40.72  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFtltaglsrpFSGRLTDRIGRVPVMAFGSLVCFVCGFLY---PVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVA 125
Cdd:pfam00083  58 GCFIGSL---------FAGKLGDRFGRKKSLLIANVLFVIGAVLQgaaKGKWSVYQLIVGRVLVGIGVGGASVLAPMYIS 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 126 DIVPANRRGEAMGIHGMCMGVGSAFGPAIG---SLISQAFSLNALFYTSSFFAFLSIAILL------------------- 183
Cdd:pfam00083 129 EIAPKKLRGALGSLYQLAITFGILLAYIFGlglNKTSNSDGWRIPLGLQLVPALLLIIGLLflpesprwlvekgrleear 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 184 -----------------NMKETLK---EKQRLSVDAFKITRRDIFePDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLT 243
Cdd:pfam00083 209 evlaklrgvpdvdreldEIKDSLEagqEAEKASWKELFSTKTRRQ-RLLIGVMLQIFQQLTGINAIFYYSTTIFENLGLS 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 244 NR-------GYYFMVFTLFSILirlfagkISDQHGRMPVTIAGCCVLTCAMIITGYAD-------------SITLFLIGA 303
Cdd:pfam00083 288 DSflvtiivGVVNFVFTFIAIF-------LVDRFGRRPLLLLGAAGMAICFVILGIVAllgvsksdwagivAIVFIALFI 360
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 304 AFFGMAMGILSPVLSAwtvDLSGDNNRGRAIATMFisleAGIGLGAFLSAGLFKNQRENLPL--VFFSMAGFALAALAYT 381
Cdd:pfam00083 361 AFFAMGWGPVPWVIVS---ELFPLSVRSKAMALAT----AANWLANFLIGFLFPIITDAIGLgyTFFIFAGLLVLFIIFV 433
emrD PRK11652
multidrug transporter EmrD;
50-194 1.49e-03

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 40.28  E-value: 1.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  50 AIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGsLVCFVCGFLYPVFTTVMP-FLLLRLVHGFSTGFKPTGTSAYVADIV 128
Cdd:PRK11652   47 AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG-MSIFILGTLVALFAHSLTvLIAASAIQGLGTGVGGVMARTLPRDLY 125
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 129 PANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALF-YTSSFFAFLSIAILLNMKETLKEKQR 194
Cdd:PRK11652  126 EGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYlFLLLLGAGVTFSMARWMPETRPADAR 192
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
57-183 3.33e-03

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 39.14  E-value: 3.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  57 LTAGLSRPFSGRLTDRIG---RVPVM----AFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTsAYVADIVP 129
Cdd:cd17475   245 LGGALGRIGLGRVSDRVFggrRRPVLvitaAIAAAALLVLSLLSPGTPLWLLVLLLILLGLFAIGWNGLYL-TLVAESAG 323
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1986780965 130 ANRRGEAMGIHGMCMGVGSAFGP-AIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17475   324 PEQAGTALGLANTINFIGIAIGPpLFGLLVDATHSYAPAWLALALLLVLAALLLL 378
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
51-377 3.66e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 39.07  E-value: 3.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  51 IIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVcGFLYPVFTTVMPFLLLR--LVHGFSTGFkptgtsAYVADIV 128
Cdd:cd17352    43 IGSLLLGVSLFSGPLSSALVNRFGCRPVAIAGGLLAAL-GLLLSSFATSLWQLYLTygVLGGLGLGL------IYSPAIV 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 129 P-----ANRRGEAMGIHGMCMGVGSAFGPAIgslisqafsLNALFYTSSF-FAFLSIAILLnmketlkekqrLSVDAFKI 202
Cdd:cd17352   116 IvgqyfEKKRGLATGIAVAGSGVGTFVFPPL---------LRYLLDNYGWrGALLILGGLC-----------LNLCVCGL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 203 TRRDIFEPDVLSPALITFLCYFGYGAVSTVTPDFSTYLGLTNRGYYFMVFTL--FSILIRLFAGKISDQ--HGRMPVTIA 278
Cdd:cd17352   176 LLRLLKDPTFVLLALGVSFAMLGFFVPFVYLPSYAKSLGIDESDAAFLLSIIgiSDIVGRILLGLLADKprIGRLYLYIF 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 279 GCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFISLeagiGLGAFLS---AGL 355
Cdd:cd17352   256 TLLILGLSLLAFPLATTYVGLIVFSVLFGFCSGSYSSLTPVILADLVGLEKLSNAYGLVLLFQ----GLAALVGppiAGL 331
                         330       340
                  ....*....|....*....|..
gi 1986780965 356 FKNQRENLPLVFFSMAGFALAA 377
Cdd:cd17352   332 LRDYTGDYDAAFYFCGACLLLS 353
PRK10642 PRK10642
proline/glycine betaine transporter ProP;
61-147 3.73e-03

proline/glycine betaine transporter ProP;


Pssm-ID: 182611 [Multi-domain]  Cd Length: 490  Bit Score: 39.31  E-value: 3.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  61 LSRP----FSGRLTDRIGRVPVMAFGSLVCFVCGF---LYPVFTTV---MPFLLL--RLVHGFSTGFKPTGTSAYVADIV 128
Cdd:PRK10642   68 LIRPlgglFFGMLGDKYGRQKILAITIVIMSISTFcigLIPSYATIgiwAPILLLlcKMAQGFSVGGEYTGASIFVAEYS 147
                          90       100
                  ....*....|....*....|....*.
gi 1986780965 129 PANRRGeAMG-------IHGMCMGVG 147
Cdd:PRK10642  148 PDRKRG-FMGswldfgsIAGFVLGAG 172
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
35-183 3.97e-03

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 39.16  E-value: 3.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  35 LPGYLSTMGGGD--YKGAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFVCGFLYPVF-----TTVMPFLLLRL 107
Cdd:cd17341   228 LPTYFKTRFGLPlvTAGILAALFPLAGALARPAGGWLSDRFGGRRRLWWLFIVMTIGAALLSLSlptsgTNLVLFLALFV 307
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1986780965 108 VHGFSTGFKPTGTSAYVADIVPaNRRGEAMGIHGMCMGVGSAFGPAI-GSLISQAFSLNALFytsSFFAFLSIAILL 183
Cdd:cd17341   308 ALGLGAGAGNGSVFRMVPFIFR-RELGAVTGLVGAIGGLGGFFLPLLfGSSALMTGSGVGAF---SLFGVLAVACTL 380
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
49-159 4.01e-03

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 39.10  E-value: 4.01e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLsrpFSGRLTDRIGRVPVMAFgSLVCFVCGFLYPVFT-TVMPFLLLRLVHGFSTGFKPTGTSAYVADI 127
Cdd:cd17358    47 GSLLTLGALIGAL---LSGKLADRIGRKRTLLI-SAIPCILGWLLIAFAkDVWMLYLGRFLAGFGGGAASVVVPVYIAEI 122
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1986780965 128 VPANRRGEAMGIHGMCMGVGSAFGPAIGSLIS 159
Cdd:cd17358   123 APKNVRGALGSLNQLLVNIGILLGYVLGSFLP 154
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
261-353 4.07e-03

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 39.18  E-value: 4.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 261 LFAGKISDQHGRMPVTIAGCCVLTCAMIITGYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLSGDNNRGRAIATMFis 340
Cdd:PRK11551   68 LLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMY-- 145
                          90
                  ....*....|...
gi 1986780965 341 leAGIGLGAFLSA 353
Cdd:PRK11551  146 --CGVPFGGALAS 156
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
11-183 5.03e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 38.75  E-value: 5.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  11 TTQFWLLGLSSFLFSSSFNMLIpelpGYLSTMG---GGDYKGAIIGLFTLTA---GLSRPFSGRLTDRIGRVPVMAFGSL 84
Cdd:cd17353   212 TPTFWLLWLMFFLNATAGLMLI----GQAKPIGqefAGLDAGIAALAVSILSifnGGGRPFWGWLSDKIGRKNTLSIAFL 287
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  85 VCFVCGFLYPVFTTVMP-FLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGVGSAFGPAIGSLISQAFS 163
Cdd:cd17353   288 IQGVAMFLLPFIGSVAVlFVLGVALIGFCYGGGFALFPALTADFFGTKNAGTNYGLLYTAKGVGGLIGPIIAAYVLYTGG 367
                         170       180
                  ....*....|....*....|
gi 1986780965 164 LNALFYTSSFFAFLSIAILL 183
Cdd:cd17353   368 YNAAFIIAAALSLVALALAL 387
MFS_BCD_PucC-like cd06176
Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator ...
259-357 5.19e-03

Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily; The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 349950 [Multi-domain]  Cd Length: 409  Bit Score: 38.64  E-value: 5.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 259 IRLFAGKISDQHG-----RMPVTIAGCCVLTCAMIITGYA--------DSITLFLIGAAF--FGMAMGILSPVLSAWTVD 323
Cdd:cd06176    51 LRVWIGHRSDTHPlrgyrRTPYIWLGMLLLALGLALAPFAalllagaaFWLGLALAVLAFllYGIGVGAAGTAFLALLAD 130
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1986780965 324 LSGDNNRGRAIATMFISLEAGIGLGAFLSAGLFK 357
Cdd:cd06176   131 LTPEERRPRAVTVVWTMLILGIIVTAIVFGRLLD 164
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
49-188 5.33e-03

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 38.78  E-value: 5.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAGLSRPFSGRLTDRIGRVPVMAFGSLVCFV-CGFLYPVFTTVMPFLLL--RLVHGFSTGFKPTGTSAYVA 125
Cdd:cd17357    52 SLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVsSLLMFLSKSAKSPELLIfgRFLVGIACGLSTGFVPMYLQ 131
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1986780965 126 DIVPANRRGEAMGIHGMCMGVGSAFGPAIG--SLISQAFSLNALFYTSSFFAFLSIAILLNMKET 188
Cdd:cd17357   132 EISPSELRGALGSLTQIGVTLGILLGQVFGlpSVLGTETLWPYLLFFPGIPALLQLAALPFFPES 196
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
67-183 5.91e-03

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 38.35  E-value: 5.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  67 GRLTDRIGRVPVMAFGSLVCFVCGFLYPVFTTVMPFLLLRLVHGFSTGFKPTGTSAYVADIVPANRRGEAMGIHGMCMGV 146
Cdd:cd17331   265 GPLTKRFGERSLLKLSVALLAIGYLLLAFVTTVWQLLVLLLPLVIGGSVLYTVITSLLTKAVPPEDTGTALGLSHALFSL 344
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1986780965 147 GSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILL 183
Cdd:cd17331   345 VRTVSPTIGGALLQAYGFPSFGLLGAAINGLLTVYLL 381
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
213-356 6.54e-03

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 38.39  E-value: 6.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 213 LSPALITFLCYFGYGAVSTVTPDFSTYLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIIT 290
Cdd:cd17393     2 LAVAAFFFINGILMASWATRIPAIKDRLGLSDAalGLLLLALGVGALVAMPLAGRLVARFGSRRVTRLGALLLLLALLLL 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1986780965 291 GYADSITLFLIGAAFFGMAMGILSPVLSAWTVDLsgDNNRGRAIATMFislEAGIGLGAFLSAGLF 356
Cdd:cd17393    82 GLAPSVPALALALFLFGAANGALDVAMNAQGVAV--ERAYGRPIMSSL---HAMWSLGGLAGALLG 142
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
65-312 7.61e-03

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 38.30  E-value: 7.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  65 FSGRLTDRIG-RVPVMAFgSLVCFVCGFLypVFTTVMPFLLLRLVhgfSTGFKPTGTSAY---------VADIVPANRRG 134
Cdd:cd17471    51 WLGRLSDRGGdRKPLILL-ALLAGALGYL--LFAFLRNYWVLLLV---GVVLLSLGAAAFpqlfalareYADRSSGRDAT 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 135 EAMGIHGMCMGVGSAFGPAIGSLISQAFSLNALFYTSSFFAFLSIAILLNMKETlKEKQRLSVDAFKITRRDIFEPDVLS 214
Cdd:cd17471   125 LFNSVLRAAFSLAWVIGPPLAFLLLDVLGFTGLFLLAALLYLVVALLVLFLLPS-VKPPAQKATPASSLVKAPVNRRLLL 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 215 PALITFLCYFGYGAVSTVTPDFST-YLGLTNR--GYYFMVFTLFSILIRLFAGKISDQHGRMPVTIAGCCVLTCAMIITG 291
Cdd:cd17471   204 LFAAFTLLFAANSMYIIAMPLYVTnELGGSESwvGLLFGLAAALEIPIMLLAGLLAKRFGKRRLLLAGFLAGVLFYLGLA 283
                         250       260
                  ....*....|....*....|....*
gi 1986780965 292 YADSITLFLIG----AAFFGMAMGI 312
Cdd:cd17471   284 LATSLWQLIALqllnAIFIGITAGL 308
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
49-183 7.97e-03

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 37.99  E-value: 7.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965  49 GAIIGLFTLTAG-LSRPFSGRLTDRIGRVP------VMAFGSLVC--FVCGFLYPVFTTVMPFLLLrlvhGFSTGFKPTG 119
Cdd:cd17328   249 GLIFGAITCIAGvLGVLLGGILADRLRRKTpradplVCAVGLLAAapFLFLALVLALSNLLLAWVL----LFLGEFLLSL 324
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1986780965 120 TSAYVADI----VPANRRGEAMGIHGMCMGV-GSAFGPAIGSLIS------------QAFSLNALFYTSSFFAFLSIAIL 182
Cdd:cd17328   325 NWAPVFAIllyvVIPTRRSTASAIQILLSHLlGDAGSPYLIGLISdllrqnkdsplaEAASLQYALLLCSFVLVLGGFFF 404

                  .
gi 1986780965 183 L 183
Cdd:cd17328   405 L 405
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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