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Conserved domains on  [gi|1982350791|gb|QRL42424|]
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NADH dehydrogenase subunit 2, partial (mitochondrion) [Poecilimon hamatus]

Protein Classification

NADH dehydrogenase subunit 2( domain architecture ID 11475933)

NADH dehydrogenase subunit 2 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
 1-322 9.18e-70

NADH dehydrogenase subunit 2; Provisional


:

Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 220.08  E-value: 9.18e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMtllLNQ 80
Cdd:MTH00160   10 FLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM---LFN 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNtFTALIITSSIIIGSLGGLNQT 160
Cdd:MTH00160   87 NISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 161 SLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLI-NLDPSLKFCLFFLLLSLGG 239
Cdd:MTH00160  166 SLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSnNKSKKIKFLLFLNLLSLGG 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 240 LPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSYQEIKWIKTMPYNPFMYLTLLcFTTFSTL 319
Cdd:MTH00160  246 LPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNF-LSFISLF 324


                  ...
gi 1982350791 320 GLL 322
Cdd:MTH00160  325 GLI 327
 
Name Accession Description Interval E-value
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
 1-322 9.18e-70

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 220.08  E-value: 9.18e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMtllLNQ 80
Cdd:MTH00160   10 FLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM---LFN 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNtFTALIITSSIIIGSLGGLNQT 160
Cdd:MTH00160   87 NISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 161 SLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLI-NLDPSLKFCLFFLLLSLGG 239
Cdd:MTH00160  166 SLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSnNKSKKIKFLLFLNLLSLGG 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 240 LPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSYQEIKWIKTMPYNPFMYLTLLcFTTFSTL 319
Cdd:MTH00160  246 LPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNF-LSFISLF 324


                  ...
gi 1982350791 320 GLL 322
Cdd:MTH00160  325 GLI 327
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 15-272 1.33e-26

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 106.24  E-value: 1.33e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  15 SVSWFGAWMGLEINLLSFIPLMT-TVKNTLSTEASLKYFLIQALASSILLFSVILMH--------------FNDMTLLLN 79
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYnytgtlsfdelskaLTGGLNSSG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  80 QQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLIL-MTWQKIAPFMLV-------SYVIVMNTFTALIITSSIII 151
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 152 GSLGGLNQTSLRKLMAYSSINHLGWMMAALINGENM----WMIYFSIYLFLSASIIFLFQLFQL------YHINQNFLIN 221
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGSVIYrrvhtrNIRDYGGLAK 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1982350791 222 LDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITT 272
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
 6-288 5.84e-19

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 87.09  E-value: 5.84e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   6 LTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVK-NTLSTEASLKYFLIQALASSILLFSVIL-------MHFNDMTLL 77
Cdd:COG1007   112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRdDRRSSEAALKYFLLGALSSGFLLYGISLlygatgsLNLAGIAAA 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 LNQQMFLVLISSS--------LLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVsYVIVMNTFTALIITSSI 149
Cdd:COG1007   192 LAAGGANSPLLLLglvlvlagLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAAL-LRLLVEAFPGLAADWQL 270

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 150 IIGSL----------GGLNQTSLRKLMAYSSINHLGWMMAALINGENMW----MIYFSIYLFLS-ASIIFLFQLFQLYHI 214
Cdd:COG1007   271 LLAVLavlsmtvgnlAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaaLFYLLAYLFMNlGAFAVILLLSRKGGE 350

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1982350791 215 NQNF-----LINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:COG1007   351 AEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYF 429
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
 6-322 3.21e-18

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 85.00  E-value: 3.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   6 LTGTMISVSSVSWFGAWMGLEINLLSFIPLMTT-VKNTLSTEASLKYFLIQALASSILLFSVILM-------HFNDMTLL 77
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIygftgslNFEDLLLF 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 LNQQMFLVLISSS--------LLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPF---------MLVSYVIVMNTF 140
Cdd:TIGR01770 192 LSNGMLNISLLLLgivlilvgLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFavflrlflyILFGFSEAWQIF 271

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 141 TALIITSSIIIGSLGGLNQTSLRKLMAYSSINHLGWMMAALINGENMWM----IYFSIYLFLSASIIFLFQLFQLYHINQ 216
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkavlFYIFIYALMSLGAFGVLSLLRSYKDEW 351

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 217 NF-------LINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLf 289
Cdd:TIGR01770 352 IEyisdfagLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYF- 430

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1982350791 290 sYQEIKWIKTMPYNPFMYLTLLCFTTFSTLGLL 322
Cdd:TIGR01770 431 -DKPERRIPSNPQSKAQSLLLSISALFILFLGL 462
 
Name Accession Description Interval E-value
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
 1-322 9.18e-70

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 220.08  E-value: 9.18e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMtllLNQ 80
Cdd:MTH00160   10 FLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM---LFN 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNtFTALIITSSIIIGSLGGLNQT 160
Cdd:MTH00160   87 NISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 161 SLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLI-NLDPSLKFCLFFLLLSLGG 239
Cdd:MTH00160  166 SLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSnNKSKKIKFLLFLNLLSLGG 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 240 LPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSYQEIKWIKTMPYNPFMYLTLLcFTTFSTL 319
Cdd:MTH00160  246 LPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNF-LSFISLF 324


                  ...
gi 1982350791 320 GLL 322
Cdd:MTH00160  325 GLI 327
ND2 MTH00105
NADH dehydrogenase subunit 2; Provisional
 2-288 6.19e-56

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177167 [Multi-domain]  Cd Length: 347  Bit Score: 185.05  E-value: 6.19e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   2 SFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVI--LMHFNDMTLL-L 78
Cdd:MTH00105   10 YLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIinLMYSGQWTITkL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  79 NQQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPfMLVSYVIVMNTFTALIITSSIIIGSLG--- 155
Cdd:MTH00105   90 TNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAP-LSILYQISPSINPNLLLTLAILSILIGgwg 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 156 GLNQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQ-NFLINLDPSLKFCLFFLL 234
Cdd:MTH00105  169 GLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSlSHTWNKTPLMTSLILLTL 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1982350791 235 LSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:MTH00105  249 LSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSL 302
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
 3-285 3.13e-52

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 175.11  E-value: 3.13e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   3 FTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFND---MTLLLN 79
Cdd:MTH00070   11 SSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTgewTIMNMQ 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  80 QQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVsYVIVMNTFTALIITSSIIIGSLG---G 156
Cdd:MTH00070   91 TPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALL-IQISHLLNSNLLIIMGLLSTLIGgwgG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 157 LNQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLINL-DPSLKFCLFFLLL 235
Cdd:MTH00070  170 LNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSkNPTLTSMMMLTLL 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1982350791 236 SLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFA 285
Cdd:MTH00070  250 SLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYA 299
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
 3-291 2.38e-51

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 173.19  E-value: 2.38e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   3 FTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMTLLLNQ-- 80
Cdd:MTH00041   11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGpl 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 -QMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSIIIGS--LGGL 157
Cdd:MTH00041   91 nTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVggWGGL 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 158 NQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHI-NQNFLINLDPSLKFCLFFLLLS 236
Cdd:MTH00041  171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLsHLNKLSQLNPISAFLFILSILS 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1982350791 237 LGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSY 291
Cdd:MTH00041  251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLF 305
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
 1-284 2.82e-51

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 172.70  E-value: 2.82e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFN----DMTl 76
Cdd:MTH00112    9 ITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNtgqwDIT- 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  77 LLNQQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVsYVIVMNTFTALIITSSIIIGSLGG 156
Cdd:MTH00112   88 QLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-LMTSNSLNPTLLLTLAILSTLIGG 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 157 ---LNQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLI-NLDPSLKFCLFF 232
Cdd:MTH00112  167 wggLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSwTKSPTLNTTLML 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1982350791 233 LLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTF 284
Cdd:MTH00112  247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTY 298
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
 1-295 2.24e-48

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 164.67  E-value: 2.24e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMTLLLnq 80
Cdd:MTH00144    9 FLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS-- 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 qmfLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVS---YVIVMNTFTALIITSSIIIGSLGGL 157
Cdd:MTH00144   87 ---MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSnflDLYWLAYLLCVISVLSALVGSIGGL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 158 NQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLINLDPSLKFCLFFLLLSL 237
Cdd:MTH00144  164 NQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1982350791 238 GGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSYQEIK 295
Cdd:MTH00144  244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKK 301
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
 1-290 9.54e-45

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 155.32  E-value: 9.54e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHfndMTLLLNQ 80
Cdd:MTH00011   11 FSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW---SFPSLLK 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMN--TFTALIITSSIIIGSLGGLN 158
Cdd:MTH00011   88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNilPMMTSMAAMSALAGGLGGMN 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 159 QTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLI-NLDPSLKFCLFFLLLSL 237
Cdd:MTH00011  168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKIsSMSQTTSMSLFIMLLSL 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1982350791 238 GGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFS 290
Cdd:MTH00011  248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLS 300
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
 1-311 1.73e-44

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 154.44  E-value: 1.73e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMTLLLNQ 80
Cdd:MTH00197    3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSV 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFlvliSSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSIIIGSLGGLNQT 160
Cdd:MTH00197   83 VLV----ILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQS 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 161 SLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQ-NFLINLDPSLKFCLFFLLLSLGG 239
Cdd:MTH00197  159 NIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQqYSNPESMSSNLVFLGLSFLSLGG 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1982350791 240 LPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLFSYQEIKWIKTMPYNPFMYLTLL 311
Cdd:MTH00197  239 LPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILL 310
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
 1-322 3.07e-44

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 154.36  E-value: 3.07e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   1 FSFTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMTLLLNQ 80
Cdd:MTH00200    9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  81 QMFLVLISSSL---LLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSIIIGS--LG 155
Cdd:MTH00200   89 MLGPLSETLILlalALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVggWG 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 156 GLNQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQ-NFLINLDPSLKFCLFFLL 234
Cdd:MTH00200  169 GLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSlSSSKTKNPILSMLLGLTL 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 235 LSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFA-AFLFSYQEIKWIKTMPYNPFMYLTLLCF 313
Cdd:MTH00200  249 LSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLtLLTLSPNQINMMSSWRTKSNSNLLVGLL 328


                  ....*....
gi 1982350791 314 TTFSTLGLL 322
Cdd:MTH00200  329 LLLSILGLP 337
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
 3-288 1.79e-43

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 152.27  E-value: 1.79e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   3 FTLLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFndMT-----LL 77
Cdd:MTH00135   11 FSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAW--LTgqwdiQQ 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 LNQQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVsYVIVMNTFTALIITSSIIIGS--LG 155
Cdd:MTH00135   89 MSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALI-LQIAPTNPTLLITLGLTSTLVggWG 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 156 GLNQTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIYLFLSASIIFLFQLFQLYHINqnfliNL------DPSLKFC 229
Cdd:MTH00135  168 GLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKIN-----TLatswtkAPALTAL 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1982350791 230 LFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:MTH00135  243 TPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTL 301
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 15-272 1.33e-26

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 106.24  E-value: 1.33e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  15 SVSWFGAWMGLEINLLSFIPLMT-TVKNTLSTEASLKYFLIQALASSILLFSVILMH--------------FNDMTLLLN 79
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYnytgtlsfdelskaLTGGLNSSG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  80 QQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLIL-MTWQKIAPFMLV-------SYVIVMNTFTALIITSSIII 151
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 152 GSLGGLNQTSLRKLMAYSSINHLGWMMAALINGENM----WMIYFSIYLFLSASIIFLFQLFQL------YHINQNFLIN 221
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGSVIYrrvhtrNIRDYGGLAK 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1982350791 222 LDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITT 272
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
 6-288 5.84e-19

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 87.09  E-value: 5.84e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   6 LTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVK-NTLSTEASLKYFLIQALASSILLFSVIL-------MHFNDMTLL 77
Cdd:COG1007   112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRdDRRSSEAALKYFLLGALSSGFLLYGISLlygatgsLNLAGIAAA 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 LNQQMFLVLISSS--------LLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVsYVIVMNTFTALIITSSI 149
Cdd:COG1007   192 LAAGGANSPLLLLglvlvlagLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAAL-LRLLVEAFPGLAADWQL 270

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 150 IIGSL----------GGLNQTSLRKLMAYSSINHLGWMMAALINGENMW----MIYFSIYLFLS-ASIIFLFQLFQLYHI 214
Cdd:COG1007   271 LLAVLavlsmtvgnlAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaaLFYLLAYLFMNlGAFAVILLLSRKGGE 350

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1982350791 215 NQNF-----LINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:COG1007   351 AEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYF 429
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
 8-282 6.34e-19

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 86.24  E-value: 6.34e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   8 GTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTL-STEASLKYFLIQALASSILLFSVILM-------HFNDMTLLLN 79
Cdd:MTH00196    5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGySAEAGLKYFVLGALSSGLFLFGCALLcgttgglHLSYINLVLN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  80 QQMFLVLISSSL---------LLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSII 150
Cdd:MTH00196   85 SGQSFSSVSVPIgylliivalLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSLF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 151 IGSLGGLNQTSLRKLMAYSSINHLGWMMAALINGE----NMWMIYFSIYLFLSasiIFLFQLFQLYHINQNFLINL---- 222
Cdd:MTH00196  165 VGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMS---ICVFSIILALNVYKNLIIEFsgls 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1982350791 223 --DPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRL 282
Cdd:MTH00196  242 rrLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
 8-282 9.10e-19

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 86.22  E-value: 9.10e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   8 GTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTL-STEASLKYFLIQALASSILLFSVILMH-------FNDMTLLLN 79
Cdd:MTH00199  109 GSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAySTEAGLKYFVLGAVSSGLFLFGCALLYgltgetsIQGINSILT 188

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  80 QQMFLVLISSSLLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSIIIGSLGGLNQ 159
Cdd:MTH00199  189 GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIYGAIGALNQ 268

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 160 TSLRKLMAYSSINHLGWMMAALINGEN-------MWMIYFSIYLFLSASIIFLFQLFQLYHINQNFLINLDPSLKFCLFF 232
Cdd:MTH00199  269 TKIKRLLAYSGIGHMGFILFGVAIGSFesiqaslIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLSRKNPVIALTLAL 348

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1982350791 233 LLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRL 282
Cdd:MTH00199  349 TFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
 6-322 3.21e-18

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 85.00  E-value: 3.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   6 LTGTMISVSSVSWFGAWMGLEINLLSFIPLMTT-VKNTLSTEASLKYFLIQALASSILLFSVILM-------HFNDMTLL 77
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIygftgslNFEDLLLF 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 LNQQMFLVLISSS--------LLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPF---------MLVSYVIVMNTF 140
Cdd:TIGR01770 192 LSNGMLNISLLLLgivlilvgLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFavflrlflyILFGFSEAWQIF 271

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 141 TALIITSSIIIGSLGGLNQTSLRKLMAYSSINHLGWMMAALINGENMWM----IYFSIYLFLSASIIFLFQLFQLYHINQ 216
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkavlFYIFIYALMSLGAFGVLSLLRSYKDEW 351

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 217 NF-------LINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFLf 289
Cdd:TIGR01770 352 IEyisdfagLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYF- 430

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1982350791 290 sYQEIKWIKTMPYNPFMYLTLLCFTTFSTLGLL 322
Cdd:TIGR01770 431 -DKPERRIPSNPQSKAQSLLLSISALFILFLGL 462
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
3-288 9.21e-16

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 77.55  E-value: 9.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   3 FTLLtGTMISVSSVSWFGAWMGLEinLLSfIPLMTTV----KNTLSTEASLKYFLIQALASSILLFSVIL-------MHF 71
Cdd:PRK05777  111 FALL-GMMVMVSANDLLTLFLGLE--LLS-LPLYALAalrrDRRRSLEAAIKYFVLGALASGFLLYGMSLlygatgsLSF 186

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  72 NDMTLLLNQQMFLVLISSS--------LLLKMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMnTFTAL 143
Cdd:PRK05777  187 AGIAKALADGSGNSLLLLFglvfllvgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVV-AFGGL 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 144 IITSSIIIGSL----------GGLNQTSLRKLMAYSSINHLGWMMAALI----NGENMWMIYFSIYLFLS----ASIIFL 205
Cdd:PRK05777  266 SEDWQQVLAIIaiasmlvgnlAALSQTNIKRLLAYSSIAHAGYLLVGLAagtaEGYSAVLFYLLAYLFMTlgafGVISLL 345

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 206 ----FQLFQLYHINQnfLINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLR 281
Cdd:PRK05777  346 rrkgGEAESISDFAG--LSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423


                  ....*..
gi 1982350791 282 LTFAAFL 288
Cdd:PRK05777  424 VIKLMYF 430
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 5-282 3.16e-10

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 60.55  E-value: 3.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791   5 LLTGTMISVSSVSWFGAWMGLEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFN----DMTLL--- 77
Cdd:COG0651   116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGAtgtlNMADLaar 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  78 ---LNQQMFLVLISSSLL---LKMGAAPFHFWFPGTM-EGLSWVNCLI--LMTwqKIAPFMLVSYVIVMNTFTALIITSS 148
Cdd:COG0651   196 laeLDPGLLLAAFALLLVgfgIKAALFPLHFWLPDAYpAAPSPVSALLsgLLT--KVGVYAILRVLTLLFGADPALFLGT 273

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 149 IIIGS---------LGGLNQTSLRKLMAYSSINHLGWMMAAL-INGENMWM--IYFSIY-------LFLSA-SIIFLFQL 208
Cdd:COG0651   274 LLLVLglltmlvgaLGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLAgaLFHLLNhalakalLFLAAgAIERATGT 353

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1982350791 209 FQLYHINQnfLINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRL 282
Cdd:COG0651   354 RDLDKLGG--LGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 25-287 1.73e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 52.19  E-value: 1.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  25 LEINLLSFIPLMTTVKNTLSTEASLKYFLIQALASSILLFSVILMHFNDMTLLLNQ-----------QMFLVLISSSLLL 93
Cdd:PRK08375  135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADlagalaenptvVTAFGFVLLALAL 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  94 KMGAAPFHFWFPGTM-EGLSWVNCLILMTWQKIAPFML--VSYVI---------VMNTFTALIITSSIIIGSLGGLNQTS 161
Cdd:PRK08375  215 KAAVFPLHTWLPRAYpAAPPVVTALLSGLVTKVAVYALirIYFTVfggdfrfalGLGWLLAVLALLSMLVGSLAALGQDD 294

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 162 LRKLMAYSSINHLGWMMA--ALINGENMW--MIY------FSIYLFLSASIIFLfqlfqLYHINQ----NFLINLDPSLK 227
Cdd:PRK08375  295 VKRVLAYSTVSQMGYILLglALLTPLALAagLLHllhhalMKGALFLAAGAIEV-----TYGTRRlselSGLGRRMPLTA 369

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 228 FCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAF 287
Cdd:PRK08375  370 AAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAF 429
ND2 MTH00198
NADH dehydrogenase subunit 2; Provisional
 94-282 5.51e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214454 [Multi-domain]  Cd Length: 607  Bit Score: 51.01  E-value: 5.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  94 KMGAAPFHFWFPGTMEGLSWVNCLILMTWQKIAPFMLVSYVIVMNTFTALIITSSIIIGSLGGLNQTSLRKLMAYSSINH 173
Cdd:MTH00198  312 KLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGH 391

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 174 LGWMMAALING-----ENMW--MIYFSIYLFLSASIIFLFQLFQLYHINQ-------------------NFLINLDPSLK 227
Cdd:MTH00198  392 IGFILIGVSAGtyeslQASWtyAVTYLVSALASFTVICTLEEFGTRTPTSrqrdgsfgnynlvrrlvdlTILSRGQPYIA 471

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1982350791 228 FCLFFLLLSLGGLPPFLGFLPKWLIIQAFI------DMNNLFLVTVM-VITTLLTLFYYLRL 282
Cdd:MTH00198  472 FSLAIVFLSLAGIPPLLGFLGKWFILVGSIkiafssSLSIYYLVALFaIICTCISAFYYIRI 533
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
44-281 7.45e-07

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 50.43  E-value: 7.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  44 STEASLKYFLIQALASSILLFSVILM--------HFNDMTL-LLNQQMFLVLISSSLLL-----KMGAAPFHFWFPGTME 109
Cdd:PRK02504  159 SNEAALKYLLIGAASSAIFLYGSSLLyglsggstQLSAIALaLITSPSLGLALALVFVIagiafKISAVPFHQWTPDVYE 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 110 GLSWVNCLILMTWQKIAPFML------VSYVIVMNTFTALIITSSIIIGSLG---GLNQTSLRKLMAYSSINHLGWMMAA 180
Cdd:PRK02504  239 GSPTPVVAFLSVGSKAAGFALairllvTAFPSFDEQWKLLFTALAILSMVLGnvvALAQTSMKRMLAYSSIGQAGFVMIG 318

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 181 LINGEN---MWMI-YFSIYLFLSASIIFLFQLFQLY----HINQ-NFLINLDPSLKFCLFFLLLSLGGLPPFLGFLPKWL 251
Cdd:PRK02504  319 LVAGTEagyASMVfYLLAYLFMNLGAFACVILFSLRtgtdQISDyAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIY 398

                         250       260       270
                  ....*....|....*....|....*....|
gi 1982350791 252 IIQAFIDMNNLFLVTVMVITTLLTLFYYLR 281
Cdd:PRK02504  399 LFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
ndhB CHL00049
NADH dehydrogenase subunit 2
 38-282 5.51e-06

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 47.69  E-value: 5.51e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  38 TVKNTLSTEASLKYFLIQALASSILLFSVILM------HFNDMTL---LLNQQMFLVLISSSLLL--------KMGAAPF 100
Cdd:CHL00049  154 TKKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsggEIELQEIvngLINTQMYNSPGISIALIfitvgigfKLSLAPF 233

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 101 HFWFPGTMEGLSWVNCLILMTWQKIAPFML------VSYVIVMNTFTALIITSSIIIGSLGGL---NQTSLRKLMAYSSI 171
Cdd:CHL00049  234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatrifdIPFYFSSNEWHLLLEILAILSMILGNLiaiTQTSMKRMLAYSSI 313

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 172 NHLGWMMAALI-----NGENMWMIYFSIYLFLSASIIFLFQLFQLYHINQNF-----LINLDPSLKFCLFFLLLSLGGLP 241
Cdd:CHL00049  314 GQIGYVIIGIIvgdsnDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIrdyagLYTKDPFLALSLALCLLSLGGIP 393

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1982350791 242 PFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRL 282
Cdd:CHL00049  394 PLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
154-314 9.86e-06

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 46.87  E-value: 9.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 154 LGGLNQTSLRKLMAYSSINHLGWMMAAL-------INGENMW----MIYFSIYLFLSASIIFLFQLFQLYHINQnfLINL 222
Cdd:PRK12663  288 LGALAYKDIRRIAGYQVISSIGFILLGLalgtpagINGAIFYlvhdMVVKTALFLIAGSLVRLTGYRSLQYLGG--LYRK 365

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 223 DPSLKFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFlFSYQEIKWIKTMPY 302
Cdd:PRK12663  366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAY-WGDKDGEEVNFKPI 444

                         170
                  ....*....|..
gi 1982350791 303 NPFMYLTLLCFT 314
Cdd:PRK12663  445 PLYRKLPLSILA 456
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
 46-288 4.51e-04

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 41.62  E-value: 4.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  46 EASLKYFLIQALASSILLFSVILMH--FNDMTL-----LLNQQMFLV------LISSSLLLKMGAAPFHFWFP-GTMEGL 111
Cdd:PRK08376  172 EAGIKYMFVGSLASSMVLLGIALLYgqYGTLNMaylavKMSENPTVVakialaLFIAGLAMKSGAVPVHMWLPdAYPAAP 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 112 SWVNCLILMTWQ----KIAPFMLVSYVIVMNTFTA--LIITSSIIIGSLG---GLNQTSLRKLMAYSSINHLGWMMAAL- 181
Cdd:PRK08376  252 SSISAMLLVIKQaglyALARVLFSIYGPAINLATVgwVIIILGCLTMFVGvamAVVQKDVKRLLAYHSVSQIGYMLLGLg 331

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 182 ------------------INGENMWMIYFSIY---LFLSASIIFlfqlFQLYHINQNFLINLD---PSLKFCLFFLLLSL 237
Cdd:PRK08376  332 vglaalgdpamasygeiaLAGGIYHIVNHALYkalLFLTAGAVI----YETGTRNLNELGGLArtmPKTTIAFLIGAAAI 407

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1982350791 238 GGLPPFLGFLPKWLIIQAfIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:PRK08376  408 VGLPPFNGFASKWLIYES-SALFNPILGVIAMIGSVLTLASFVKVFHTAFF 457
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 159-288 6.81e-04

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 41.11  E-value: 6.81e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 159 QTSLRKLMAYSSINHLGWMMAALINGENMWMIYFSIY----------LFLSASIIFlfQLFQLYHINQ-NFLINLDPSLK 227
Cdd:PRK12667  316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHiinhaiakslLFLASGVFI--HAAGTRDIDElAGLGRKMPIAS 393

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1982350791 228 FCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNLFLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:PRK12667  394 FAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFF 454
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 99-288 7.04e-04

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 41.29  E-value: 7.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791  99 PFHFWFPGTMEGLSWVNCLI-----------LMTwqKIAPFMLVS-----YVIVMNTFTALIITSSiiigslgGLNQTSL 162
Cdd:COG1009   229 PLHFWLPDAMEGPTPVSALLhaatmvkagvyLLA--RLSPLFALSpvwltVVAIIGAITALFAALI-------ALAQTDI 299

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1982350791 163 RKLMAYSSINHLGWMMAALinGENMWMI---------YFSIYLFLSASII-------FLFQLfqlyhinqNFLINLDPSL 226
Cdd:COG1009   300 KRVLAYSTVSQLGYMFLAL--GVGAYVAalfhllthaFFKALLFLGAGSVihatgtrDIRKM--------GGLRKKMPIT 369

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1982350791 227 KFCLFFLLLSLGGLPPFLGFLPKWLIIQAFIDMNNL--FLVTVMVITTLLTLFYYLRLTFAAFL 288
Cdd:COG1009   370 AITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLgpLLLAVALLGAFLTAFYSFRLFFLVFF 433
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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