|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
4.20e-99 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 287.06 E-value: 4.20e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIFIM 80
Cdd:MTH00157 1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 81 MMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157 79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 161 RLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-225 |
6.08e-44 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 146.97 E-value: 6.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 5 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFI 79
Cdd:TIGR01131 1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 80 MMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1980524905 160 VRLAANMIAGHLLLTLLGNTGPSLT-VSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-222 |
1.63e-39 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 133.29 E-value: 1.63e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 67 FNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMI 146
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
74-222 |
1.21e-21 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 88.70 E-value: 1.21e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 74 FISIFIMMMFNNFMGLF---PYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPTALMSFMVMIETI 149
Cdd:pfam00119 61 LLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEII 140
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 150 SNIIRPGTLAVRLAANMIAGH---LLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
76-220 |
8.42e-19 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 80.89 E-value: 8.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtALMSFMVMIETISNIIR 154
Cdd:COG0356 63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITgqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:COG0356 142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
4.20e-99 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 287.06 E-value: 4.20e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIFIM 80
Cdd:MTH00157 1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 81 MMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157 79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 161 RLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
8.60e-52 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 167.13 E-value: 8.60e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDP-STNIFN-LSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNlNLHNEFKTLLGMNSFNGSTFIFISIF 78
Cdd:MTH00176 1 MLVDLFSSFDPpNKNIFSmISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00176 80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLT----VSFMLILITgQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIV-QILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-225 |
6.08e-44 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 146.97 E-value: 6.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 5 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFI 79
Cdd:TIGR01131 1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 80 MMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1980524905 160 VRLAANMIAGHLLLTLLGNTGPSLT-VSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-222 |
1.63e-39 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 133.29 E-value: 1.63e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 67 FNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMI 146
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
3-223 |
8.33e-39 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 133.95 E-value: 8.33e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 3 TNLFSTFDPSTnIFNLSLNWTSTFLGL---LLIPSMFWLmPSRINILWNKMNLNLhneFKTLLGMNSFNGSTFI--FISI 77
Cdd:MTH00035 5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 78 FIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGT 157
Cdd:MTH00035 80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 158 LAVRLAANMIAGHLLLTLLGNT----GPSLTVSFMLILITGqtVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00035 160 LGLRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIFF--LLFILEIGVACIQAYVFTALVHFYLEQ 227
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
2.23e-38 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 132.93 E-value: 2.23e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTNIFNLSLN----WTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFIS 76
Cdd:MTH00005 1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 77 IFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPG 156
Cdd:MTH00005 80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 157 TLAVRLAANMIAGHLLLTLLGNTGPSL----TVSFMLILITgQTVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIYAASAlfssISSTILLILT-QMGYILFEVGICLIQAYIFCLLLSLYSDD 229
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
7.57e-37 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 128.83 E-value: 7.57e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTNIFNL--SLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIF 78
Cdd:MTH00173 1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLN-LGGFSLLLSSLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00173 80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLTVS----FMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSssvvSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
1.59e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 112.23 E-value: 1.59e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTNIFnlslnwTSTFLGLLLIPSMFWLMPS---RINILWNKMNLNLHNEFKTLLGMNSFNGS--TFIFI 75
Cdd:MTH00120 1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRP 155
Cdd:MTH00120 75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 156 GTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00120 155 LALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
7.74e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 110.42 E-value: 7.74e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDpSTNIFNLSLNWTSTFLGLLLIPS-------------MFWLMPSRINILWNKMNLNLHNEFktllgmnsf 67
Cdd:MTH00179 1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSltnrwlnnrlstlQSWFFGSFTFQLMQPINKKGHKWA--------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 68 ngstFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIE 147
Cdd:MTH00179 71 ----VLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIE 146
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 148 TISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTV---LLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00179 147 TISLLIRPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVlflLTLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
73-223 |
1.42e-29 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 109.96 E-value: 1.42e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 73 IFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNI 152
Cdd:MTH00132 72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1980524905 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00132 152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-220 |
9.98e-29 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 107.73 E-value: 9.98e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGLLLIPSMFWLMPSRINILwnKMNLnLHNEFKTLLGMNSFNGSTF--IFISIF 78
Cdd:MTH00101 1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISI--QQWL-IQLTSKQMMTIHNTKGQTWslMLMSLI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00101 77 LFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMAL 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSL-TVSFMLILITGQTVLL--ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00101 157 AVRLTANITAGHLLIHLIGGATLALmSISTTTALITFIILILltILEFAVALIQAYVFTLLVSLY 221
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
1.72e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 104.28 E-value: 1.72e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGLLLI--PSMFWLmPSRINILWNKMNLNLHNEFKTLLGMNSFNGStFIFISIF 78
Cdd:MTH00073 1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00073 78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00073 158 GVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
15-220 |
2.46e-23 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 93.57 E-value: 2.46e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 15 IFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIfISIFIMMMFNNFMGLFPYIF 94
Cdd:MTH00172 17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 95 TSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAGHLLLT 174
Cdd:MTH00172 96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1980524905 175 LLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00172 176 ILAGFGFNMLCASGFLSLFPLLIMVfitLLEIAVAVIQAYVFCLLTTIY 224
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
17-220 |
8.03e-23 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 92.38 E-value: 8.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 17 NLSLNWTSTFLGLLLIPSMFWLM-------PSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFIMMMFNNFMGL 89
Cdd:MTH00175 23 DWLVTFTNSSMMMVLAVIIFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 90 FPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAG 169
Cdd:MTH00175 102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 170 HLLLTLLG--------NTGPSLTVSFMLILItgqtVLLILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00175 182 HLLFAILSgfafnmlsNGLIILSLFPMLIMI----FITLLEMAVAVIQAYVFCLLTTIY 236
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
74-222 |
1.21e-21 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 88.70 E-value: 1.21e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 74 FISIFIMMMFNNFMGLF---PYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPTALMSFMVMIETI 149
Cdd:pfam00119 61 LLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEII 140
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 150 SNIIRPGTLAVRLAANMIAGH---LLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
76-220 |
8.42e-19 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 80.89 E-value: 8.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtALMSFMVMIETISNIIR 154
Cdd:COG0356 63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITgqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:COG0356 142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
38-220 |
7.32e-17 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 76.90 E-value: 7.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 38 LMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIfISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLF 117
Cdd:MTH00174 59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 118 GWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTV 197
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217
|
170 180
....*....|....*....|....*..
gi 1980524905 198 LL----ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00174 218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
73-220 |
8.77e-15 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 70.59 E-value: 8.77e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 73 IFISIFIMMMFNNFMGLFP-YIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtalmsFMVMIETIS 150
Cdd:PRK05815 75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 151 NIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
75-220 |
1.18e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 60.14 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 75 ISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALpmwMSFMLFGWINNTNH----MFTHLVpQGTPTALMSFMVMIETIS 150
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524905 151 NIIRPGTLAVRLAANMIAGHLLLTLLgntgpsLTVSFML---ILITGQTV-----LLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK13419 251 LFTKPFALTVRLFANMTAGHIVILSL------IFISFILksyIVAVAVSVpfaifIYLLELFVAFLQAYIFTMLSALF 322
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
26-223 |
6.96e-08 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 50.75 E-value: 6.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 26 FLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLlgmNSFNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFT 105
Cdd:MTH00087 10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 106 IALPMWMSFMLFGWINNTnhMFTHLVPQGTPTALMSF-MVMIETISNIIRPGTLAVRLAANMIAGHLLLTLLGntgpSLT 184
Cdd:MTH00087 87 YALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLN----FLG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 1980524905 185 VSFMLILItgqtVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00087 161 EKYVWLSI----LAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
50-169 |
1.16e-06 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 47.19 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 50 MNLNLHNEFKTLLGMNSFNGSTFIFISIFIMMMFNNFMGL-FPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFT 128
Cdd:MTH00050 1 MFVNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFS 80
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1980524905 129 HLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAG 169
Cdd:MTH00050 81 SFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
95-220 |
4.31e-06 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 46.42 E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 95 TSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETI-SNIIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1980524905 174 T-LLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
|
|
|