NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|195661119|ref|YP_002117871|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Ursus spelaeus]

Protein Classification

ATP synthase protein 8( domain architecture ID 10009565)

ATP synthase protein 8 is a component of mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 3.13e-30

ATP synthase F0 subunit 8; Validated


:

Pssm-ID: 214420  Cd Length: 67  Bit Score: 100.69  E-value: 3.13e-30
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 195661119  1 MPQLDTSTWSITILSMVLTLFIILQLKVSKYKYPEIPEPKSLLSSKKLVPWEEKWTKIYLPLLSPQR 67
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
 
Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 3.13e-30

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 100.69  E-value: 3.13e-30
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 195661119  1 MPQLDTSTWSITILSMVLTLFIILQLKVSKYKYPEIPEPKSLLSSKKLVPWEEKWTKIYLPLLSPQR 67
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-55 3.23e-11

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 52.34  E-value: 3.23e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 195661119   1 MPQLDTSTWSITILSMVLTLFIILQLKVSKYkYPEIPEPKSLLSSKKLVPWEEKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH-TPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 3.13e-30

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 100.69  E-value: 3.13e-30
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 195661119  1 MPQLDTSTWSITILSMVLTLFIILQLKVSKYKYPEIPEPKSLLSSKKLVPWEEKWTKIYLPLLSPQR 67
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-55 3.23e-11

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 52.34  E-value: 3.23e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 195661119   1 MPQLDTSTWSITILSMVLTLFIILQLKVSKYkYPEIPEPKSLLSSKKLVPWEEKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH-TPTNPPPKSLKTTKHPNPWEWKW 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH