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Conserved domains on  [gi|1955856842|ref|XP_038886487|]
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uncharacterized protein At4g33100 [Benincasa hispida]

Protein Classification

TRIAP1/MDM35 family protein( domain architecture ID 10010988)

TRIAP1/MDM35 family protein similar to Arabidopsis thaliana uncharacterized protein At4g33100

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03079 PLN03079
Uncharacterized protein At4g33100; Provisional
 4-85 2.83e-32

Uncharacterized protein At4g33100; Provisional


:

Pssm-ID: 178628  Cd Length: 91  Bit Score: 107.33  E-value: 2.83e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955856842  4 KKESKSSASATSRCADLRAAYHNCFNRWYSEKFVKGHWDEEPCDSEWQKYRACLSEHLVDKKLKRFLEEETLVHSSMKAD 83
Cdd:PLN03079   5 RSKSSSSRSSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLEDKHLSQILEVDGTSAPYKQAD 84


                 ..
gi 1955856842 84 GS 85
Cdd:PLN03079  85 AD 86
 
Name Accession Description Interval E-value
PLN03079 PLN03079
Uncharacterized protein At4g33100; Provisional
 4-85 2.83e-32

Uncharacterized protein At4g33100; Provisional


Pssm-ID: 178628  Cd Length: 91  Bit Score: 107.33  E-value: 2.83e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955856842  4 KKESKSSASATSRCADLRAAYHNCFNRWYSEKFVKGHWDEEPCDSEWQKYRACLSEHLVDKKLKRFLEEETLVHSSMKAD 83
Cdd:PLN03079   5 RSKSSSSRSSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLEDKHLSQILEVDGTSAPYKQAD 84


                 ..
gi 1955856842 84 GS 85
Cdd:PLN03079  85 AD 86
UPF0203 pfam05254
Uncharacterized protein family (UPF0203); This family of proteins is functionally ...
 11-73 2.25e-24

Uncharacterized protein family (UPF0203); This family of proteins is functionally uncharacterized.


Pssm-ID: 461604  Cd Length: 69  Bit Score: 86.54  E-value: 2.25e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955856842 11 ASATSRCADLRAAYHNCFNRWYSEKFVKGHWDEEPCDSEWQKYRACLSEHLVDKKLKRFLEEE 73
Cdd:pfam05254  1 NSLAPECTELKEKYDACFNRWYSEKFLKGKSKENECEDLWKDYQECVQKALKEKGIDKLLDEA 63
 
Name Accession Description Interval E-value
PLN03079 PLN03079
Uncharacterized protein At4g33100; Provisional
 4-85 2.83e-32

Uncharacterized protein At4g33100; Provisional


Pssm-ID: 178628  Cd Length: 91  Bit Score: 107.33  E-value: 2.83e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955856842  4 KKESKSSASATSRCADLRAAYHNCFNRWYSEKFVKGHWDEEPCDSEWQKYRACLSEHLVDKKLKRFLEEETLVHSSMKAD 83
Cdd:PLN03079   5 RSKSSSSRSSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLEDKHLSQILEVDGTSAPYKQAD 84


                 ..
gi 1955856842 84 GS 85
Cdd:PLN03079  85 AD 86
UPF0203 pfam05254
Uncharacterized protein family (UPF0203); This family of proteins is functionally ...
 11-73 2.25e-24

Uncharacterized protein family (UPF0203); This family of proteins is functionally uncharacterized.


Pssm-ID: 461604  Cd Length: 69  Bit Score: 86.54  E-value: 2.25e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955856842 11 ASATSRCADLRAAYHNCFNRWYSEKFVKGHWDEEPCDSEWQKYRACLSEHLVDKKLKRFLEEE 73
Cdd:pfam05254  1 NSLAPECTELKEKYDACFNRWYSEKFLKGKSKENECEDLWKDYQECVQKALKEKGIDKLLDEA 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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