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collagen alpha-1(I) chain-like [Canis lupus familiaris]
Protein Classification
PksD superfamily protein ( domain architecture ID 1904567 )
PksD superfamily protein
List of domain hits
Name
Accession
Description
Interval
E-value
PksD super family
cl43841 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
130-610
7.32e-05
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
COG3321 :Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 46.40
E-value: 7.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 130 HPPS LP PSHCA RE E mg HW A RRPR A PQER A SLQGTGRARGRWQGAEPGVR AA ASVRPTP A P A TWGVG A FLCCPGRPRGS L G 209
Cdd:COG3321 859 RRVP LP TYPFQ RE D -- AA A ALLA A ALAA A LAAAAALGALLLAALAAALA AA LLALAAA A A A ALALA A AALAALLALVA L A 936
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 210 GRG A FKPPTTCW A GS A RLG L GGPRGEPSTGGPGVL AA PRQPGTGPSRGMWPIGG A P A F A PGHTP A P A PMERRSPGTSSPG 289
Cdd:COG3321 937 AAA A ALLALAAA A AA A AAA L AAAEAGALLLLAAAA AA AAAAAAAAAAAAAAAAA A A A A A LAAAA A L A LLAAAALLLAAAA 1016
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 290 PHWLRTVPGGHSRS A RTTSCSRGPSSPDSN A V A GSR A PTWPTSRQTARHPMSGGPLRPGAPTALG A DGRSRVKQGRQPPG 369
Cdd:COG3321 1017 AAAALLALAALLAA A AAALAAAAAAAAAAA A L A ALA A AAAAAAALALALAALLLLAALAELALAA A ALALAAALAAAALA 1096
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 370 T AL PSSGIPAAPGLGAVPRRRLRSWRPSAL L RLPGPGRRLRGGRV A RRPHLLS L RA A RDCGGG A GVAS A PAPG A SGFRWR 449
Cdd:COG3321 1097 L AL AALAAALLLLALLAALALAAAAAALLA L AALLAAAAAAAALA A AAAAAAA L AL A AAAAAL A AALA A ALLA A AALLLA 1176
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 450 PLS A ARLHANGPPLPAFFWPGWEPP A DHDWVQP A VREG A WPRPGT A DRVGTS A L A LPGP L P L PQ A YFLCRLST A LQPRA L 529
Cdd:COG3321 1177 LAL A LAAALAAALAGLAALLLAALL A ALLAALL A LALA A LAAAAA A LLAAAA A A A ALAL L A L AA A AAAVAALA A AAAAL L 1256
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 530 TREY A G A PC A RLTPGPTQ A Q A RR A GP A GRRGLEGSPPPQ AA TGTPWT A EESPD A PGGWRGGR A HAGRRPH A GLGPLP A PT 609
Cdd:COG3321 1257 AALA A L A LL A AAAGLAAL A A A AA A AA A ALALAAAAAAAA AA LAALLA A AAAAA A AAAAAAAA A ALAAALL A AALAAL A AA 1336
.
gi 1953105656 610 G 610
Cdd:COG3321 1337 V 1337
Name
Accession
Description
Interval
E-value
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
130-610
7.32e-05
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 46.40
E-value: 7.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 130 HPPS LP PSHCA RE E mg HW A RRPR A PQER A SLQGTGRARGRWQGAEPGVR AA ASVRPTP A P A TWGVG A FLCCPGRPRGS L G 209
Cdd:COG3321 859 RRVP LP TYPFQ RE D -- AA A ALLA A ALAA A LAAAAALGALLLAALAAALA AA LLALAAA A A A ALALA A AALAALLALVA L A 936
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 210 GRG A FKPPTTCW A GS A RLG L GGPRGEPSTGGPGVL AA PRQPGTGPSRGMWPIGG A P A F A PGHTP A P A PMERRSPGTSSPG 289
Cdd:COG3321 937 AAA A ALLALAAA A AA A AAA L AAAEAGALLLLAAAA AA AAAAAAAAAAAAAAAAA A A A A A LAAAA A L A LLAAAALLLAAAA 1016
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 290 PHWLRTVPGGHSRS A RTTSCSRGPSSPDSN A V A GSR A PTWPTSRQTARHPMSGGPLRPGAPTALG A DGRSRVKQGRQPPG 369
Cdd:COG3321 1017 AAAALLALAALLAA A AAALAAAAAAAAAAA A L A ALA A AAAAAAALALALAALLLLAALAELALAA A ALALAAALAAAALA 1096
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 370 T AL PSSGIPAAPGLGAVPRRRLRSWRPSAL L RLPGPGRRLRGGRV A RRPHLLS L RA A RDCGGG A GVAS A PAPG A SGFRWR 449
Cdd:COG3321 1097 L AL AALAAALLLLALLAALALAAAAAALLA L AALLAAAAAAAALA A AAAAAAA L AL A AAAAAL A AALA A ALLA A AALLLA 1176
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 450 PLS A ARLHANGPPLPAFFWPGWEPP A DHDWVQP A VREG A WPRPGT A DRVGTS A L A LPGP L P L PQ A YFLCRLST A LQPRA L 529
Cdd:COG3321 1177 LAL A LAAALAAALAGLAALLLAALL A ALLAALL A LALA A LAAAAA A LLAAAA A A A ALAL L A L AA A AAAVAALA A AAAAL L 1256
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 530 TREY A G A PC A RLTPGPTQ A Q A RR A GP A GRRGLEGSPPPQ AA TGTPWT A EESPD A PGGWRGGR A HAGRRPH A GLGPLP A PT 609
Cdd:COG3321 1257 AALA A L A LL A AAAGLAAL A A A AA A AA A ALALAAAAAAAA AA LAALLA A AAAAA A AAAAAAAA A ALAAALL A AALAAL A AA 1336
.
gi 1953105656 610 G 610
Cdd:COG3321 1337 V 1337
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
226-666
1.04e-04
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 45.75
E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 226 RLG LG G PR G E P STGG P GVL AA PRQPGTG P SRGMWPIGG APA F A PGHT PAPAP MERRS P GTSSPGPHWLRTVPGGHSRSAR 305
Cdd:PRK07764 384 RLG VA G GA G A P AAAA P SAA AA APAAAPA P AAAAPAAAA APA P A AAPQ PAPAP APAPA P PSPAGNAPAGGAPSPPPAAAPS 463
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 306 TTSCSRGPSS P DSN A VAGSRA P TW P TSRQTARH P MSGGPLRPGAP tal G A DG R S R VKQGRQ ppgtalpssgipaapglg A 385
Cdd:PRK07764 464 AQPAPAPAAA P EPT A APAPAP P AA P APAAAPAA P AAPAAPAGADD --- A A TL R E R WPEILA ------------------ A 522
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 386 VP R R RLRS W RPSALLRLPGPG R RLRGGRVARRP hll S L RAARDCG G G A G V ASAPAPGAS G FR W RP --- LSA A RLH A N G PP 462
Cdd:PRK07764 523 VP K R SRKT W AILLPEATVLGV R GDTLVLGFSTG --- G L ARRFASP G N A E V LVTALAEEL G GD W QV eav VGP A PGA A G G EG 599
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 463 L PA FFWP G WEPP A DHD wv QPAVREG A WPR P GT A DRVGTS A L A LPG P L P LPQ A YFLCRLST A LQPRALTREYAG A PCARLT 542
Cdd:PRK07764 600 P PA PASS G PPEE A ARP -- AAPAAPA A PAA P AP A GAAAAP A E A SAA P A P GVA A PEHHPKHV A VPDASDGGDGWP A KAGGAA 677
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 543 P G ptq A QARRAG PA GRRGLE G SP P P Q A A TGTPW T -- A EESP D APGGWRGGRAH A GRRPH A GLG P L P A P TGTPSALQGCPL 620
Cdd:PRK07764 678 P A --- A PPPAPA PA APAAPA G AA P A Q P A PAPAA T pp A GQAD D PAAQPPQAAQG A SAPSP A ADD P V P L P PEPDDPPDPAGA 754
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1953105656 621 LGC P R PP GPVPHFLPG A VESGAGRGGTGGRGGCCPGLGPAAPRA R S 666
Cdd:PRK07764 755 PAQ P P PP PAPAPAAAP A AAPPPSPPSEEEEMAEDDAPSMDDEDR R D 800
Name
Accession
Description
Interval
E-value
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
130-610
7.32e-05
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 46.40
E-value: 7.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 130 HPPS LP PSHCA RE E mg HW A RRPR A PQER A SLQGTGRARGRWQGAEPGVR AA ASVRPTP A P A TWGVG A FLCCPGRPRGS L G 209
Cdd:COG3321 859 RRVP LP TYPFQ RE D -- AA A ALLA A ALAA A LAAAAALGALLLAALAAALA AA LLALAAA A A A ALALA A AALAALLALVA L A 936
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 210 GRG A FKPPTTCW A GS A RLG L GGPRGEPSTGGPGVL AA PRQPGTGPSRGMWPIGG A P A F A PGHTP A P A PMERRSPGTSSPG 289
Cdd:COG3321 937 AAA A ALLALAAA A AA A AAA L AAAEAGALLLLAAAA AA AAAAAAAAAAAAAAAAA A A A A A LAAAA A L A LLAAAALLLAAAA 1016
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 290 PHWLRTVPGGHSRS A RTTSCSRGPSSPDSN A V A GSR A PTWPTSRQTARHPMSGGPLRPGAPTALG A DGRSRVKQGRQPPG 369
Cdd:COG3321 1017 AAAALLALAALLAA A AAALAAAAAAAAAAA A L A ALA A AAAAAAALALALAALLLLAALAELALAA A ALALAAALAAAALA 1096
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 370 T AL PSSGIPAAPGLGAVPRRRLRSWRPSAL L RLPGPGRRLRGGRV A RRPHLLS L RA A RDCGGG A GVAS A PAPG A SGFRWR 449
Cdd:COG3321 1097 L AL AALAAALLLLALLAALALAAAAAALLA L AALLAAAAAAAALA A AAAAAAA L AL A AAAAAL A AALA A ALLA A AALLLA 1176
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 450 PLS A ARLHANGPPLPAFFWPGWEPP A DHDWVQP A VREG A WPRPGT A DRVGTS A L A LPGP L P L PQ A YFLCRLST A LQPRA L 529
Cdd:COG3321 1177 LAL A LAAALAAALAGLAALLLAALL A ALLAALL A LALA A LAAAAA A LLAAAA A A A ALAL L A L AA A AAAVAALA A AAAAL L 1256
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 530 TREY A G A PC A RLTPGPTQ A Q A RR A GP A GRRGLEGSPPPQ AA TGTPWT A EESPD A PGGWRGGR A HAGRRPH A GLGPLP A PT 609
Cdd:COG3321 1257 AALA A L A LL A AAAGLAAL A A A AA A AA A ALALAAAAAAAA AA LAALLA A AAAAA A AAAAAAAA A ALAAALL A AALAAL A AA 1336
.
gi 1953105656 610 G 610
Cdd:COG3321 1337 V 1337
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
226-666
1.04e-04
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 45.75
E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 226 RLG LG G PR G E P STGG P GVL AA PRQPGTG P SRGMWPIGG APA F A PGHT PAPAP MERRS P GTSSPGPHWLRTVPGGHSRSAR 305
Cdd:PRK07764 384 RLG VA G GA G A P AAAA P SAA AA APAAAPA P AAAAPAAAA APA P A AAPQ PAPAP APAPA P PSPAGNAPAGGAPSPPPAAAPS 463
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 306 TTSCSRGPSS P DSN A VAGSRA P TW P TSRQTARH P MSGGPLRPGAP tal G A DG R S R VKQGRQ ppgtalpssgipaapglg A 385
Cdd:PRK07764 464 AQPAPAPAAA P EPT A APAPAP P AA P APAAAPAA P AAPAAPAGADD --- A A TL R E R WPEILA ------------------ A 522
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 386 VP R R RLRS W RPSALLRLPGPG R RLRGGRVARRP hll S L RAARDCG G G A G V ASAPAPGAS G FR W RP --- LSA A RLH A N G PP 462
Cdd:PRK07764 523 VP K R SRKT W AILLPEATVLGV R GDTLVLGFSTG --- G L ARRFASP G N A E V LVTALAEEL G GD W QV eav VGP A PGA A G G EG 599
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 463 L PA FFWP G WEPP A DHD wv QPAVREG A WPR P GT A DRVGTS A L A LPG P L P LPQ A YFLCRLST A LQPRALTREYAG A PCARLT 542
Cdd:PRK07764 600 P PA PASS G PPEE A ARP -- AAPAAPA A PAA P AP A GAAAAP A E A SAA P A P GVA A PEHHPKHV A VPDASDGGDGWP A KAGGAA 677
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 543 P G ptq A QARRAG PA GRRGLE G SP P P Q A A TGTPW T -- A EESP D APGGWRGGRAH A GRRPH A GLG P L P A P TGTPSALQGCPL 620
Cdd:PRK07764 678 P A --- A PPPAPA PA APAAPA G AA P A Q P A PAPAA T pp A GQAD D PAAQPPQAAQG A SAPSP A ADD P V P L P PEPDDPPDPAGA 754
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1953105656 621 LGC P R PP GPVPHFLPG A VESGAGRGGTGGRGGCCPGLGPAAPRA R S 666
Cdd:PRK07764 755 PAQ P P PP PAPAPAAAP A AAPPPSPPSEEEEMAEDDAPSMDDEDR R D 800
PHA03247
PHA03247 large tegument protein UL36; Provisional
232-671
1.04e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.08
E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 232 PR GE P STGG P G V LAAP R Q P GTG P SRGMWPIGGAPAFA P GHTPA P A P M err S P G T SS P G P HWLRTV P GGHSRSARTTSCSR 311
Cdd:PHA03247 2571 PR PA P RPSE P A V TSRA R R P DAP P QSARPRAPVDDRGD P RGPAP P S P L --- P P D T HA P D P PPPSPS P AANEPDPHPPPTVP 2647
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 312 G P SS P D s NAV A GS R APTWPTS R QTA R HPMSG ---- G P L R PG A PTAL G ADGRSRVKQGRQ P PGTAL P SSGIP A A P G - L G AV 386
Cdd:PHA03247 2648 P P ER P R - DDP A PG R VSRPRRA R RLG R AAQAS sppq R P R R RA A RPTV G SLTSLADPPPPP P TPEPA P HALVS A T P L p P G PA 2726
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 387 PR R RLRSWR P S A LLRLPG P GRRLRG G RV AR RPHLLSLRAARDCGGG A GV A SA P APGASGFRWRP LS AA R LHANG P PL PA f 466
Cdd:PHA03247 2727 AA R QASPAL P A A PAPPAV P AGPATP G GP AR PARPPTTAGPPAPAPP A AP A AG P PRRLTRPAVAS LS ES R ESLPS P WD PA - 2805
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 467 fwpgw E PPA DHDWVQP A VREG A W P RPGTADRVGTSAL A L P G P LPL P QAYFLCRL S T A LQPRALT R EYAGA P C A RLTPGPT 546
Cdd:PHA03247 2806 ----- D PPA AVLAPAA A LPPA A S P AGPLPPPTSAQPT A P P P P PGP P PPSLPLGG S V A PGGDVRR R PPSRS P A A KPAAPAR 2880
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 547 QAQA R R A G PA GR R GL E GSPP P QAATGT P wtaeespdapggwrggrahag RR P H A GLG P L P A P TGT P SALQGC P LLGC PRP 626
Cdd:PHA03247 2881 PPVR R L A R PA VS R ST E SFAL P PDQPER P --------------------- PQ P Q A PPP P Q P Q P QPP P PPQPQP P PPPP PRP 2939
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1953105656 627 PG P VPHFLPG A VESGAGRGGTGGRG G CCPGLGP A A PR A R SRDRG P 671
Cdd:PHA03247 2940 QP P LAPTTDP A GAGEPSGAVPQPWL G ALVPGRV A V PR F R VPQPA P 2984
PHA03247
PHA03247 large tegument protein UL36; Provisional
2-397
1.90e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 45.31
E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 2 P P SA P S P SGAAR P RG P GEVAA P RGGT P YKGLSSSEA P E E EG R CSRS lshagsd GP R SPL P PAPSAPRAPRPPRAGRASAA 81
Cdd:PHA03247 2612 A P PS P L P PDTHA P DP P PPSPS P AANE P DPHPPPTVP P P E RP R DDPA ------- PG R VSR P RRARRLGRAAQASSPPQRPR 2684
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 82 A R RDPDPESGPSGPRG P G P GSSRLG P RC H PAPLRS P PA P VVPQVPS AS HPPSLP P S hcareemghwarr P R A PQERASLQ 161
Cdd:PHA03247 2685 R R AARPTVGSLTSLAD P P P PPPTPE P AP H ALVSAT P LP P GPAAARQ AS PALPAA P A ------------- P P A VPAGPATP 2751
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 162 G TGRARG R WQG - A E P GVR A AASVRPTPA P ATWGVG A FLCCPGRPRGSLGGRGAFK PP TTCW A GS A R L GLGGPRGE P STGG 240
Cdd:PHA03247 2752 G GPARPA R PPT t A G P PAP A PPAAPAAGP P RRLTRP A VASLSESRESLPSPWDPAD PP AAVL A PA A A L PPAASPAG P LPPP 2831
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 241 PGVLAAPRQ P GT GP SRGMW P I GG ap AF APG htpap APME RR S P GT S SPGPHWLRTV P gg HS R SARTTSC SR GPS S PDSNA 320
Cdd:PHA03247 2832 TSAQPTAPP P PP GP PPPSL P L GG -- SV APG ----- GDVR RR P P SR S PAAKPAAPAR P -- PV R RLARPAV SR STE S FALPP 2902
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 321 VAGS R A P TWPTSRQTARH P MSGG P LR P GA P TALGADGRSRVKQGRQ P P G TAL PS SGI P A ------ A PG LG AVPR R R LRSW 394
Cdd:PHA03247 2903 DQPE R P P QPQAPPPPQPQ P QPPP P PQ P QP P PPPPPRPQPPLAPTTD P A G AGE PS GAV P Q pwlgal V PG RV AVPR F R VPQP 2982
...
gi 1953105656 395 R PS 397
Cdd:PHA03247 2983 A PS 2985
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
327-723
4.21e-04
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 44.09
E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 327 PT W P TS R QT A rhpmsggplrpg A PTA L G A DGRSRVKQGRQPPGTA L PSSGIPA A PG L G A VPRRRLRSWRPS A LLRLPGPG 406
Cdd:COG3321 864 PT Y P FQ R ED A ------------ A AAL L A A ALAAALAAAAALGALL L AALAAAL A AA L L A LAAAAAAALALA A AALAALLA 931
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 407 RRLRGGRV A RRPH L LSLR AA RDCGGG A GV A S A PAPG A SGFRWRPLS AA RLH A n GPPLP A FFWPGWEPP A DHDWVQP A VRE 486
Cdd:COG3321 932 LVALAAAA A ALLA L AAAA AA AAAALA A AE A G A LLLL A AAAAAAAAA AA AAA A - AAAAA A AAAAAALAA A AALALLA A AAL 1010
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 487 GAWPRPGT A DRVGTS AL ALPGPLP L PQ A YFLCRLST AL QPR A LTREY A G A PCAR L TPGPTQ A QARRAGP A GRRGLEGSPP 566
Cdd:COG3321 1011 LLAAAAAA A ALLALA AL LAAAAAA L AA A AAAAAAAA AL AAL A AAAAA A A A LALA L AALLLL A ALAELAL A AAALALAAAL 1090
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 567 PQ AA TGTPWT A EESPDAPGGWRGGR A H A GRRPHAGLGPLPAPTGTPS A LQGCPLLGCPRPPGPVPHFLPG A VESG A GRGG 646
Cdd:COG3321 1091 AA AA LALALA A LAAALLLLALLAAL A L A AAAAALLALAALLAAAAAA A ALAAAAAAAAALALAAAAAALA A ALAA A LLAA 1170
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1953105656 647 TGGRGGCCPG L GP A APR A RSRDRGPFALRRRRGRPG A AGERGVRRGQG AA GTVG A RVTQG A RA A PS A SVLRRFP V L A 723
Cdd:COG3321 1171 AALLLALALA L AA A LAA A LAGLAALLLAALLAALLA A LLALALAALAA AA AALL A AAAAA A AL A LL A LAAAAAA V A A 1247
PHA03378
PHA03378 EBNA-3B; Provisional
107-340
2.92e-03
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain]
Cd Length: 991
Bit Score: 41.21
E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 107 PR CH P A PLR SP P APVVPQV P SASHP ----- P SL PP SHCAREEMGH W ARRPRA P QE ----------- RASLQ GT GRARG R W 170
Cdd:PHA03378 621 PR QW P M PLR PI P MRPLRMQ P ITFNV lvfpt P HQ PP QVEITPYKPT W TQIGHI P YQ psptgantmlp IQWAP GT MQPPP R A 700
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 171 QGAEPGVR A AASVRPT PA P AT WGVGAFLCC PGR P R GSLGGR G AFK PP TTCWAGSARLGLGGP R GE P STGG PG V l AA P RQ P 250
Cdd:PHA03378 701 PTPMRPPA A PPGRAQR PA A AT GRARPPAAA PGR A R PPAAAP G RAR PP AAAPGRARPPAAAPG R AR P PAAA PG A - PT P QP P 779
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 251 GTG P SRGMWPIG GAP AFA P GHTPA P AP M E --- R RS PG TSS P GPHW LR TVPG G HSRSA R TT sc SRG P SSPDSN A V AG SR - A 326
Cdd:PHA03378 780 PQA P PAPQQRPR GAP TPQ P PPQAG P TS M Q lmp R AA PG QQG P TKQI LR QLLT G GVKRG R PS -- LKK P AALERQ A A AG PT p S 857
250
....*....|....
gi 1953105656 327 P TWP TS RQTARH P M 340
Cdd:PHA03378 858 P GSG TS DKIVQA P V 871
PRK07003
PRK07003 DNA polymerase III subunit gamma/tau;
213-440
6.89e-03
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain]
Cd Length: 830
Bit Score: 39.83
E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 213 AF K P PT T cwagsarl G L G G P R G EPSTGGP G VLA AP RQ - PGTGPSRGMW P IGG A PAF A P G HTP AP APMERRSPGTSSPG P h 291
Cdd:PRK07003 357 AF E P AV T -------- G G G A P G G GVPARVA G AVP AP GA r AAAAVGASAV P AVT A VTG A A G AAL AP KAAAAAAATRAEAP P - 427
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 292 w LRTV P GGHSRSARTTSCSRG P SSPDS NA V A ------ GS R APTW P TSRQT A RH P M S GG P LRPGAPT A LG A DGR S RVKQGR 365
Cdd:PRK07003 428 - AAPA P PATADRGDDAADGDA P VPAKA NA R A sadsrc DE R DAQP P ADSGS A SA P A S DA P PDAAFEP A PR A AAP S AATPAA 506
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953105656 366 Q P PGT A LPSSGIPA AP GLG A V P RRRL R SWR P S A LLRLPGP G RRLRGGR V A R RP hll SL R AAR D C G GG A GV A SA PA 440
Cdd:PRK07003 507 V P DAR A PAAASRED AP AAA A P P APEA R PPT P A A AAPAARA G GAAAALD V L R NA --- GM R VSS D R G AR A AA A AK PA 578
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
153-371
7.57e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 39.58
E-value: 7.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 153 A P QER A SLQGTGR A RGRWQGA E PGV R A AA SVR P TPAP A twgvgaflcc P GRPRGSLGGRG A FKP P TTCW A GSARLGLGGP 232
Cdd:PRK07764 589 G P APG A AGGEGPP A PASSGPP E EAA R P AA PAA P AAPA A ---------- P APAGAAAAPAE A SAA P APGV A APEHHPKHVA 658
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953105656 233 RGEP S T GG P G VL A APRQPG tgpsrgmw P IGGA PA F AP GHTP APA P mer RS P GTSS P G P HWLRTVPGGHSRS A RTTSCSR G 312
Cdd:PRK07764 659 VPDA S D GG D G WP A KAGGAA -------- P AAPP PA P AP AAPA APA G --- AA P AQPA P A P AATPPAGQADDPA A QPPQAAQ G 727
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1953105656 313 P S S P DSN A VAGSRA P TW P TSRQTARHPMSGG P LR P GAPT A LGADGRSRVKQGRQPPGT A 371
Cdd:PRK07764 728 A S A P SPA A DDPVPL P PE P DDPPDPAGAPAQP P PP P APAP A AAPAAAPPPSPPSEEEEM A 786
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
