|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-288 |
1.86e-77 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 239.73 E-value: 1.86e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFsdspLIIDKNIFHTLICS 80
Cdd:MTH00160 20 ISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN----LMLFNNISSMLINS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNiFISMIILASVLVGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00160 96 SLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQTSLRKILAYS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 161 SINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFLGFFP 240
Cdd:MTH00160 175 SINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLP 254
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1946843232 241 KWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYTELKM 288
Cdd:MTH00160 255 KWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKW 302
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
5-264 |
1.06e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 133.21 E-value: 1.06e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 5 STSWLGVWMGLEINLLSFIPLMT-NTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHT----- 76
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdeLSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 ------LICSALLLKMGAAPFHFWFPATMEGLSWKN-CFILMTWQKIAPLMLLAYV-------IEMNIFISMIILASVLV 142
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIRRSllylpssPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 143 GSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENI----WELYFMIYTLLSLSIVMVFN-----IHHTYHINQNFLTMN 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843232 214 HDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMT 264
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-280 |
2.69e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 102.50 E-value: 2.69e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 3 ITSTSWLGVWMGLEINLLSFIPL-MTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHT--- 76
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLagIAAALAAGgan 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 ---------LICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISMIILA 138
Cdd:COG1007 199 spllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGLAADWQLLLAVLAVL 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 139 SVLVGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWeLYFMIYTLLSL-SIVMVFNIHHTYHINQNFLTM 212
Cdd:COG1007 279 SMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGtplgvSAAL-FYLLAYLFMNLgAFAVILLLSRKGGEAEEIEDL 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1946843232 213 N----HDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFL 280
Cdd:COG1007 358 AglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYF 429
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-274 |
1.64e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 97.33 E-value: 1.64e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMT-NTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIIDKNIFHT--- 76
Cdd:TIGR01770 117 LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSngm 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 -----------LICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIA---------PLMLLAYVIEMNIFISMII 136
Cdd:TIGR01770 197 lnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGFSEAWQIFLAIIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 137 LASVLVGSLGGLNQSSLRKLMAYSSINHVGW-MISAMVIGENIWE---LYFMIYTLLSL----SIVMVFNIHHTYHINQN 208
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYALMSLgafgVLSLLRSYKDEWIEYIS 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1946843232 209 FLT--MNHDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRL 274
Cdd:TIGR01770 357 DFAglFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-288 |
1.86e-77 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 239.73 E-value: 1.86e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFsdspLIIDKNIFHTLICS 80
Cdd:MTH00160 20 ISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN----LMLFNNISSMLINS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNiFISMIILASVLVGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00160 96 SLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQTSLRKILAYS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 161 SINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFLGFFP 240
Cdd:MTH00160 175 SINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLP 254
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1946843232 241 KWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYTELKM 288
Cdd:MTH00160 255 KWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKW 302
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-276 |
5.08e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 200.46 E-value: 5.08e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSD--SPLIIDKNIFHTLI 78
Cdd:MTH00105 19 ITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGqwTITKLTNPTASTLM 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---AYVIEMNIFISMIILaSVLVGSLGGLNQSSLRK 155
Cdd:MTH00105 99 TIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILyqiSPSINPNLLLTLAIL-SILIGGWGGLNQTQLRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPF 235
Cdd:MTH00105 178 ILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPL 257
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1946843232 236 LGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTF 276
Cdd:MTH00105 258 TGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIY 298
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-278 |
2.23e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 193.50 E-value: 2.23e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHTLI 78
Cdd:MTH00112 19 ITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDItqLTNPTSCTLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLaYVIEMNI---FISMIILASVLVGSLGGLNQSSLRK 155
Cdd:MTH00112 99 TLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-LMTSNSLnptLLLTLAILSTLIGGWGGLNQTQLRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPF 235
Cdd:MTH00112 178 IMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPL 257
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1946843232 236 LGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLA 278
Cdd:MTH00112 258 TGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYIS 300
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-289 |
7.62e-59 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 192.45 E-value: 7.62e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIID--KNIFHTLI 78
Cdd:MTH00041 19 IVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGplNTLSSIII 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEmNIFISMIILA---SVLVGSLGGLNQSSLRK 155
Cdd:MTH00041 99 TLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISN-LLNSNILILCgilSVLVGGWGGLNQTQTRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPF 235
Cdd:MTH00041 178 ILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1946843232 236 LGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYTELKMT 289
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSIS 311
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-282 |
3.58e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 187.87 E-value: 3.58e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIID--KNIFHTLI 78
Cdd:MTH00200 19 LTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEmlGPLSETLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISMIILA--SVLVGSLGGLNQSSLRKL 156
Cdd:MTH00200 99 LLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGllSVLVGGWGGLNQTQLRKI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 157 MAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFL 236
Cdd:MTH00200 179 LAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLT 258
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1946843232 237 GFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFS 282
Cdd:MTH00200 259 GFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTL 304
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-287 |
6.39e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 186.63 E-value: 6.39e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIIdknifhTLICS 80
Cdd:MTH00144 19 LSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM------SLLLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISMIIL---ASVLVGSLGGLNQSSLRKLM 157
Cdd:MTH00144 93 GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVisvLSALVGSIGGLNQTQVRALL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 158 AYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHInQNFLTMNHDRITKSCMFLLLLSLGGLPPFLG 237
Cdd:MTH00144 173 AYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-KDLGSLKPSYKTGLSIISLLLSLGGLPPFLG 251
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1946843232 238 FFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYTELK 287
Cdd:MTH00144 252 FCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKK 301
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-277 |
5.65e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 184.74 E-value: 5.65e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIID--KNIFHTLI 78
Cdd:MTH00070 19 ITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNmqTPLPTIML 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYV---IEMNIFISMIILaSVLVGSLGGLNQSSLRK 155
Cdd:MTH00070 99 TIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIshlLNSNLLIIMGLL-STLIGGWGGLNQTQLRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPF 235
Cdd:MTH00070 178 IMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPT 257
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1946843232 236 LGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFL 277
Cdd:MTH00070 258 TGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYA 299
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-284 |
1.55e-53 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 178.05 E-value: 1.55e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDspliIDKNIFHTLICS 80
Cdd:MTH00011 21 MALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPS----LLKNITALMLLV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNI--FISMIILASVLVGSLGGLNQSSLRKLMA 158
Cdd:MTH00011 97 SLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNIlpMMTSMAAMSALAGGLGGMNQTQLRPLLA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 159 YSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFLGF 238
Cdd:MTH00011 177 YSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGF 256
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1946843232 239 FPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYT 284
Cdd:MTH00011 257 MPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPT 302
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-276 |
2.68e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 178.07 E-value: 2.68e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFS------------IILMymfsDSPLI 68
Cdd:MTH00135 19 LTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFAsttnawltgqwdIQQM----SHPLP 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 69 IdknifhTLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISMII-LASVLVGSLGG 147
Cdd:MTH00135 95 T------TMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLgLTSTLVGGWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 148 LNQSSLRKLMAYSSINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQnfLTMNHdriTKSCMFLLLL 227
Cdd:MTH00135 169 LNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINT--LATSW---TKAPALTALT 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1946843232 228 SLGGL-----PPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTF 276
Cdd:MTH00135 244 PLILLslgglPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSY 297
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
1-283 |
8.50e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 173.32 E-value: 8.50e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIilMYMFSDSPLiidKNIFHTLICS 80
Cdd:MTH00197 13 FSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG--SLSFSNLYL---SLLSVVLVIL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISMIILASVLVGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00197 88 GLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 161 SINHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFLGFFP 240
Cdd:MTH00197 168 SIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1946843232 241 KWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSY 283
Cdd:MTH00197 248 KWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSN 290
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
5-264 |
1.06e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 133.21 E-value: 1.06e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 5 STSWLGVWMGLEINLLSFIPLMT-NTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHT----- 76
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdeLSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 ------LICSALLLKMGAAPFHFWFPATMEGLSWKN-CFILMTWQKIAPLMLLAYV-------IEMNIFISMIILASVLV 142
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIRRSllylpssPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 143 GSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENI----WELYFMIYTLLSLSIVMVFN-----IHHTYHINQNFLTMN 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843232 214 HDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMT 264
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
3-274 |
1.17e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 105.11 E-value: 1.17e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 3 ITSTSWLGVWMGLEINLLSFIPLMTNTKNTM-STEASLKYFLVQALASAMLLFSIILMYMFS---------------DSP 66
Cdd:MTH00196 10 ISSSNWLSVYLAIELQTLSLFILIAQNRGSGySAEAGLKYFVLGALSSGLFLFGCALLCGTTgglhlsyinlvlnsgQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 67 LIIDKNIFHTLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISMIILASVLVGSLG 146
Cdd:MTH00196 90 SSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSLFVGAIG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 147 GLNQSSLRKLMAYSSINHVGWMISAMVIGE----NIWELYFMIYTLLSL---SIVMVFNIHHTYHINQNFLTMNhDRITK 219
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSIcvfSIILALNVYKNLIIEFSGLSRR-LPILA 248
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1946843232 220 SCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRL 274
Cdd:MTH00196 249 ITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-274 |
3.20e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.10 E-value: 3.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLS-FIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSP------LIIDKNI 73
Cdd:MTH00199 112 LLVSSINWLSIYLAIELQTLTlFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETsiqginSILTGDV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 74 FHTLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYV-IEMNIFISMIILaSVLVGSLGGLNQSS 152
Cdd:MTH00199 192 GKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIgPVTNVVLICAVL-SIIYGAIGALNQTK 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 153 LRKLMAYSSINHVGWMISAMVIGEN-------IWELYFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKScMFLL 225
Cdd:MTH00199 271 IKRLLAYSGIGHMGFILFGVAIGSFesiqaslIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLSRKNPVIALT-LALT 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1946843232 226 LLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRL 274
Cdd:MTH00199 350 FLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-280 |
2.69e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 102.50 E-value: 2.69e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 3 ITSTSWLGVWMGLEINLLSFIPL-MTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHT--- 76
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLagIAAALAAGgan 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 ---------LICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISMIILA 138
Cdd:COG1007 199 spllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGLAADWQLLLAVLAVL 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 139 SVLVGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWeLYFMIYTLLSL-SIVMVFNIHHTYHINQNFLTM 212
Cdd:COG1007 279 SMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGtplgvSAAL-FYLLAYLFMNLgAFAVILLLSRKGGEAEEIEDL 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1946843232 213 N----HDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFL 280
Cdd:COG1007 358 AglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYF 429
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-280 |
6.27e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 101.44 E-value: 6.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEI-NLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLI--IDKNIFHT- 76
Cdd:PRK05777 118 VMVSANDLLTLFLGLELlSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFagIAKALADGs 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 -----------LICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISMII 136
Cdd:PRK05777 198 gnsllllfglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvafgGLSEDWQQVLAIIA 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 137 LASVLVGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENIWE----LYFMIYTLLSL----SIVMVFNIHHTYHINQN 208
Cdd:PRK05777 278 IASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsavlFYLLAYLFMTLgafgVISLLRRKGGEAESISD 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1946843232 209 FLTMN-HDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFL 280
Cdd:PRK05777 358 FAGLSkRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYF 430
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-274 |
1.64e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 97.33 E-value: 1.64e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 1 IAITSTSWLGVWMGLEINLLSFIPLMT-NTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIIDKNIFHT--- 76
Cdd:TIGR01770 117 LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSngm 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 -----------LICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIA---------PLMLLAYVIEMNIFISMII 136
Cdd:TIGR01770 197 lnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGFSEAWQIFLAIIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 137 LASVLVGSLGGLNQSSLRKLMAYSSINHVGW-MISAMVIGENIWE---LYFMIYTLLSL----SIVMVFNIHHTYHINQN 208
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYALMSLgafgVLSLLRSYKDEWIEYIS 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1946843232 209 FLT--MNHDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRL 274
Cdd:TIGR01770 357 DFAglFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-274 |
7.34e-16 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 77.49 E-value: 7.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 12 WMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPLIID------------KNIFHTLIC 79
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADlaarlaeldpglLLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 80 SALLLKMGAAPFHFWFPATMEG--------LSWkncfiLMTwqKIAP-----LMLLAYVIEMNIFISMIIL----ASVLV 142
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYPAapspvsalLSG-----LLT--KVGVyailrVLTLLFGADPALFLGTLLLvlglLTMLV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 143 GSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENI---WELYFMIY-----TLLSLSIVMVFNIHHTYHINQNFLTMNH 214
Cdd:COG0651 286 GALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLglaGALFHLLNhalakALLFLAAGAIERATGTRDLDKLGGLGKR 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 215 DRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRL 274
Cdd:COG0651 366 MPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-274 |
2.04e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 70.66 E-value: 2.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 3 ITSTSWLGVWMGLEINLLSFIPLMTNTKNTMST---------EASLKYFLVQALASAMLLFSIILMYMFSDSPLIIDKNI 73
Cdd:MTH00198 205 IESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEGMLGTIL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 74 FHTL----------------ICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQK-IAPLMLLAYVIEMNIFISMII 136
Cdd:MTH00198 285 SATLettnielrqgslgylfITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKfTVYILLTSLVITSKLLLSVAI 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 137 LaSVLVGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWE--LYFMIYTLLSLSIVMV---FNIHHTYHIN 206
Cdd:MTH00198 365 I-SLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGtyeslQASWTyaVTYLVSALASFTVICTleeFGTRTPTSRQ 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 207 QNFLTMNHDRITKSCMFLLL---------------LSLGGLPPFLGFFPKWLIIQTMTEMN-------YQFIIVIMVVMT 264
Cdd:MTH00198 444 RDGSFGNYNLVRRLVDLTILsrgqpyiafslaivfLSLAGIPPLLGFLGKWFILVGSIKIAfssslsiYYLVALFAIICT 523
|
330
....*....|
gi 1946843232 265 LITLFYYLRL 274
Cdd:MTH00198 524 CISAFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-279 |
2.56e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.21 E-value: 2.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 15 LEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLFSIILMYM------FSDSPLIIDKNIFHT----LICSALLL 84
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGvtgtlnMADLAGALAENPTVVtafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 85 KMGAAPFHFWFPATM-EGLSWKNCFILMTWQKIAPLML---LAYVIEMNIFISM--------IILASVLVGSLGGLNQSS 152
Cdd:PRK08375 215 KAAVFPLHTWLPRAYpAAPPVVTALLSGLVTKVAVYALiriYFTVFGGDFRFALglgwllavLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 153 LRKLMAYSSINHVGWMISAMVIGENIWELYFMIYTL--------LSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFL 224
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLhhalmkgaLFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1946843232 225 LLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAF 279
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-280 |
4.79e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 4.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 36 EASLKYFLVQALASAMLLFSIILMY-------------MFSDSPLIIDKnIFHTLICSALLLKMGAAPFHFWFP-ATMEG 101
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLYgqygtlnmaylavKMSENPTVVAK-IALALFIAGLAMKSGAVPVHMWLPdAYPAA 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 102 LSWKNCFILMTwqKIAPLMLLAYVIeMNIFIS----------MIILA--SVLVGSLGGLNQSSLRKLMAYSSINHVGWMI 169
Cdd:PRK08376 251 PSSISAMLLVI--KQAGLYALARVL-FSIYGPainlatvgwvIIILGclTMFVGVAMAVVQKDVKRLLAYHSVSQIGYML 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 170 SAMVIGENIWEL--------------------YFMIYTLLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSL 229
Cdd:PRK08376 328 LGLGVGLAALGDpamasygeialaggiyhivnHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAI 407
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843232 230 GGLPPFLGFFPKWLIIQTMTEMNyQFIIVIMVVMTLITLFYYLRLTFLAFL 280
Cdd:PRK08376 408 VGLPPFNGFASKWLIYESSALFN-PILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
34-273 |
1.49e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 52.75 E-value: 1.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 34 STEASLKYFLVQALASAMLLFSIILMYMFSD--------SPLIIDKNIFHTLICSALLL-----KMGAAPFHFWFPATME 100
Cdd:PRK02504 159 SNEAALKYLLIGAASSAIFLYGSSLLYGLSGgstqlsaiALALITSPSLGLALALVFVIagiafKISAVPFHQWTPDVYE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 101 GLSWKNCFILMTWQKIA----PLMLLAYVIEM------NIFISMIILASVLvGSLGGLNQSSLRKLMAYSSINHVGWMIS 170
Cdd:PRK02504 239 GSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSfdeqwkLLFTALAILSMVL-GNVVALAQTSMKRMLAYSSIGQAGFVMI 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 171 AMVIGEN----IWELYFMIYTLLSL---SIVMVFNIHH-TYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPFLGFFPKW 242
Cdd:PRK02504 318 GLVAGTEagyaSMVFYLLAYLFMNLgafACVILFSLRTgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKI 397
|
250 260 270
....*....|....*....|....*....|.
gi 1946843232 243 LIIQTMTEMNYQFIIVIMVVMTLITLFYYLR 273
Cdd:PRK02504 398 YLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
30-279 |
2.08e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 51.93 E-value: 2.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 30 KNTMSTEASLKYFLVQALASAMLLFSIILMYMFSDSPL--------IIDKNIFHTLICSALLL--------KMGAAPFHF 93
Cdd:CHL00049 156 KDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIelqeivngLINTQMYNSPGISIALIfitvgigfKLSLAPFHQ 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 94 WFPATMEGLSWKNCFILMTWQKIAPLMLLAYVI---------EMNIFISMIILASVLVGSLGGLNQSSLRKLMAYSSINH 164
Cdd:CHL00049 236 WTPDVYEGSPTPVVAFLSVTSKVAASALATRIFdipfyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 165 VGWMISAMVIGENIWE-----LYFMIYTLLSL---SIVMVFNIHH-TYHINQNFLTMNHDRITKSCMFLLLLSLGGLPPF 235
Cdd:CHL00049 316 IGYVIIGIIVGDSNDGyasmiTYMLFYIFMNLgtfACIVLFGLRTgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1946843232 236 LGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAF 279
Cdd:CHL00049 396 AGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-280 |
5.94e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 50.74 E-value: 5.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 36 EASLKYFLVQALASAMLLFSIILMYM------FSDSPLIIDKNIF------------HTLICSAL-----LLKMGAAPFH 92
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYAtfgtlnMADLSAKIRGLSFpltgglagnpplALGVALALalwafTIKAAIFPNH 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 93 FWFP-----------ATMEGLSWK---NCFILMTWQKIAPLMLLAYVIEMNIFISMII-LASVLVGSLGGLNQSSLRKLM 157
Cdd:PRK12667 244 FWLPdahpaapspvsAMLSGLVVNvgaYAIIRFLYTIFGISPSLIDFRAALSPILIILgAVSAIIGALMMVVQKDVKRLL 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 158 AYSSINHVGWMISAMVIGENIWELYFMIYT--------LLSLSIVMVFNIHHTYHINQNFLTMNHDRITKSCMFLLLLSL 229
Cdd:PRK12667 324 AYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSL 403
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843232 230 GGLPPFLGFFPKWLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFL 280
Cdd:PRK12667 404 VGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFF 454
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-280 |
3.47e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 48.22 E-value: 3.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 34 STEASLKYFLVQALASAMLLFSIILMY----------MFSDSPLIIDKNIFhTLICsaLLLKMGAA------PFHFWFPA 97
Cdd:COG1009 160 ARRAARKAFLVTRVGDLGLLLGILLLGaiagtlnfseLLAAAPTILSSPLL-TLIL--LLLLLGAFgksaqfPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 98 TME-----------------GLswkncFILMtwqKIAPLMLLAYVIemNIFISMIILASVLVGSLGGLNQSSLRKLMAYS 160
Cdd:COG1009 237 AMEgptpvsallhaatmvkaGV-----YLLA---RLSPLFALSPVW--LTVVAIIGAITALFAALIALAQTDIKRVLAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 161 SINHVGWMISAMVIGeNIWELYFMIYT------LLSLS--IVMvfnihHTYHiNQNFLTMN----HDRITKSCMFLLLLS 228
Cdd:COG1009 307 TVSQLGYMFLALGVG-AYVAALFHLLThaffkaLLFLGagSVI-----HATG-TRDIRKMGglrkKMPITAITFLIGALS 379
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1946843232 229 LGGLPPFLGFFPKWLIIQ-TMTEMNYQFIIVIMVVMT-LITLFYYLRLTFLAFL 280
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGaFLTAFYSFRLFFLVFF 433
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
82-287 |
7.56e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 7.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 82 LLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFisMIILASVLVGSLGGLNQSSLRKLMAYSS 161
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFF--FLLLFGLLICFFQMFLLKSYKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 162 INHVGWMISAMVIGENIWELYFMIYTLLSLSIVMVFNIHHTYHINQnfltmnhdritkscmFLLLLSLGGLPPFLGFFPK 241
Cdd:MTH00091 145 TESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVS---------------WETLLVFMNLPFSVTFFVK 209
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1946843232 242 WLIIQTMTEMNYQFIIVIMVVMTLITLFYYLRLTFLAFLFSYTELK 287
Cdd:MTH00091 210 IFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFK 255
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-178 |
1.15e-03 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 40.37 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 34 STEASLKYFLVQALASAMLLFSIILMY-------------MFSDSPLIIDKNIFHTLICSALLLKMGAAPFHFWFPATME 100
Cdd:PRK08668 145 SRKASLKYFVLSAIGAYAMLYAIFLIYaktgtfdfadisqGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYS 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 101 ------------GLSWKNCFILmtwqkiapLMLLAYVIEMNIFISMI----------ILA-----SVLVGSLGGLNQSSL 153
Cdd:PRK08668 225 eapqsfsavlsgQLSKLGAYGF--------LLVLYVLPGTKLFSEFGtyrgvplfnyILAwlgniSIIVGTLMAILQEDI 296
|
170 180
....*....|....*....|....*
gi 1946843232 154 RKLMAYSSINHVGWMISAMVIGENI 178
Cdd:PRK08668 297 KKLIAYSSVANGGYILVGLGLGTSL 321
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
37-166 |
2.85e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 39.29 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 37 ASLKYFLVQALASAMLLFSIILMYMFS-----DSPLIIDKNI---FHTLICSALLL----KMGAAPFHFWFPATMEGlsw 104
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAgaltfDIAELAAAPLpltAQLLLFLAFFIafavKVPMFPFHTWLPDAHVE--- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 105 kncfilmtwqkiAPL---MLLAYV---------IEMNIFIS----------MIILA--SVLVGSLGGLNQSSLRKLMAYS 160
Cdd:COG1008 239 ------------APTagsVLLAGVllkmggyglLRFALPLFpeasayfaplLAALGviGIIYGALVALAQTDLKRLIAYS 306
|
....*.
gi 1946843232 161 SINHVG 166
Cdd:COG1008 307 SVSHMG 312
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-285 |
5.69e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.26 E-value: 5.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 5 STSWLGVWMGLEINLLSFIPLMTNTKNTMSTEASLKYFLVQALASAMLLF-SIILMY-------MFSDSPLIIDKNIFHT 76
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpAVILIYtktgnldFVSGGLFSKNQSIILL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 77 LICSALLLKMGAAPFHFWFPATM-----------------EGLSWKNCFILMTWQkiapLMLLAYVIEMNIFISMIILAS 139
Cdd:PRK06589 215 LMFIYGIAKTAIFPVHSWLPAAMvahypvsallhavivvkTGLFCIYKILLYIFG----LSYLQRIFAEFNWLIFIPIVS 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 140 VLVGSLGGLNQSSLRKLMAYSSINHVGW------MISAMVIGENIWELYFMIYTLLSLSIVM--VFNIHHTYHINQNFLT 211
Cdd:PRK06589 291 IFYSSLKALKTDNIKKILAYSTISQLSLallsafILTPKALGAAILHLVSHSFAKICLFYSMgsIYSLKKEDQVDKLHGT 370
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1946843232 212 MNHDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIM----VVMTLITLFYYLRLTFLAFLFSYTE 285
Cdd:PRK06589 371 SKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVmlvvIASSILSALYLLKILSSIYKPSLSE 448
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
124-279 |
5.87e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.09 E-value: 5.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 124 YVIEMNIFISMIILASV---LVGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENIWELYFMIYTLL--SLSIVMVFN 198
Cdd:MTH00209 231 SLFSSPFFSMSLLLLGSlttLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALfkALLFICAGN 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843232 199 IHHTYHINQNFLTM----NHDRITKSCMFLLLLSLGGLPPFLGFFPKWLIIQTMTEMNYQFIIVIM-VVMTLITLFYYLR 273
Cdd:MTH00209 311 IIHSHGHSQDIRMVgnlwYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILmFLSTSLTAAYSMR 390
|
....*.
gi 1946843232 274 LTFLAF 279
Cdd:MTH00209 391 LSYFSL 396
|
|
| |
