|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
9.68e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 248.20 E-value: 9.68e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPliidNNIFQVLICS 80
Cdd:MTH00160 20 ISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLMLF----NNISSMLINS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNiFISIIIMTSVLIGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00160 96 SLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQTSLRKILAYS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 161 SINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGFFP 240
Cdd:MTH00160 175 SINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLP 254
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1946843194 241 KWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKvTQLTIPNSLIFLIILTLTSVSTLGLPFSS 317
Cdd:MTH00160 255 KWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNK-WNLKKKKNKFSLILNFLSFISLFGLILSS 330
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
5-264 |
5.77e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 131.28 E-value: 5.77e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 5 STSWLGVWMGLEINLLSFIPLMT-NTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSS-------------NPLIID 70
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskaltgGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 71 NNIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKN-CFILMTWQKIAPLMLLAYV-------IEMNIFISIIIMTSVLI 142
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIRRSllylpssPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 143 GSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENI----WELYFMIYTFLSLSIVMVFN-----MHHIYHINQNFLTMN 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843194 214 HDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMT 264
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-313 |
6.55e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 101.35 E-value: 6.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 3 ISSTSWLGVWMGLEINLLSFIPL-MTNTKNIMSTEASLKYFLVQALASAMLLFSIILM-----------------HTLSS 64
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgslnlagiaaalaAGGAN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 65 NPLIIdnnIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISII 135
Cdd:COG1007 199 SPLLL---LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGLAADWQLLLAVL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 136 IMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWeLYFMIYTFLSL-SIVMVFNMHHIYHINQNF 209
Cdd:COG1007 276 AVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGtplgvSAAL-FYLLAYLFMNLgAFAVILLLSRKGGEAEEI 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 210 LTMN----HDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTE 285
Cdd:COG1007 355 EDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEE 434
|
330 340
....*....|....*....|....*...
gi 1946843194 286 lkvtQLTIPNSLIFLIILTLTSVSTLGL 313
Cdd:COG1007 435 ----EAPISAPPGLRVALVIAALLVLLL 458
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-274 |
1.65e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.24 E-value: 1.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMT-NTKNIMSTEASLKYFLVQALASAMLLFSIILMH-----------TLSSNPLI 68
Cdd:TIGR01770 117 LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYgftgslnfedlLLFLSNGM 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 69 IDNNIFQ---VLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIA---------PLMLLAYVIEMNIFISIII 136
Cdd:TIGR01770 197 LNISLLLlgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGFSEAWQIFLAIIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 137 MTSVLIGSLGGLNQSSLRKLMAYSSINHVGW-MISAMVIGENIWE---LYFMIYT------FLSLSIVMVFNMHHIYHIN 206
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYAlmslgaFGVLSLLRSYKDEWIEYIS 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1946843194 207 QNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRL 274
Cdd:TIGR01770 357 DFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
9.68e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 248.20 E-value: 9.68e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPliidNNIFQVLICS 80
Cdd:MTH00160 20 ISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLMLF----NNISSMLINS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNiFISIIIMTSVLIGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00160 96 SLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN-FIIIIIILSAIIGAIGGLNQTSLRKILAYS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 161 SINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGFFP 240
Cdd:MTH00160 175 SINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLP 254
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1946843194 241 KWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKvTQLTIPNSLIFLIILTLTSVSTLGLPFSS 317
Cdd:MTH00160 255 KWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNK-WNLKKKKNKFSLILNFLSFISLFGLILSS 330
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-316 |
3.00e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 195.84 E-value: 3.00e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSII--LMHTLSSNPLIIDNNIFQVLI 78
Cdd:MTH00105 19 ITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIinLMYSGQWTITKLTNPTASTLM 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---AYVIEMNIFISIIIMtSVLIGSLGGLNQSSLRK 155
Cdd:MTH00105 99 TIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILyqiSPSINPNLLLTLAIL-SILIGGWGGLNQTQLRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPF 235
Cdd:MTH00105 178 ILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 236 MGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFL--FSYTELKVTQLTIPNSLIFLIILTLTSVSTLGL 313
Cdd:MTH00105 258 TGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLtmFPSTNNMKMKWQFENTKPMTLLPTLIILSTMLL 337
|
...
gi 1946843194 314 PFS 316
Cdd:MTH00105 338 PLT 340
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-278 |
2.63e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 190.80 E-value: 2.63e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIIL--MHTLSSNPLIIDNNIFQVLI 78
Cdd:MTH00112 19 ITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTnaWNTGQWDITQLTNPTSCTLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLaYVIEMNIFISIIIM---TSVLIGSLGGLNQSSLRK 155
Cdd:MTH00112 99 TLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-LMTSNSLNPTLLLTlaiLSTLIGGWGGLNQTQLRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPF 235
Cdd:MTH00112 178 IMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPL 257
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1946843194 236 MGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLA 278
Cdd:MTH00112 258 TGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYIS 300
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-313 |
2.24e-56 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 185.90 E-value: 2.24e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPLIID--NNIFQVLI 78
Cdd:MTH00041 19 IVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGplNTLSSIII 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEmNIFISIII---MTSVLIGSLGGLNQSSLRK 155
Cdd:MTH00041 99 TLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISN-LLNSNILIlcgILSVLVGGWGGLNQTQTRK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 156 LMAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPF 235
Cdd:MTH00041 178 ILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 236 MGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKVTQL----TIPNSLIFLIILTLTSVSTL 311
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFswrnSGNITVYGVILSILSSISIL 337
|
..
gi 1946843194 312 GL 313
Cdd:MTH00041 338 GL 339
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-318 |
1.19e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 184.02 E-value: 1.19e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIIL--MHTLSSNPLIIDNNIFQVLI 78
Cdd:MTH00200 19 LTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLnaWTSGQWGISEMLGPLSETLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEM--NIFISIIIMTSVLIGSLGGLNQSSLRKL 156
Cdd:MTH00200 99 LLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPAlnSNILLLLGLLSVLVGGWGGLNQTQLRKI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 157 MAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFM 236
Cdd:MTH00200 179 LAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 237 GFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFL-AFLFSYTELKVTQLTIPNSLIFLIILTLTSVSTLGLPF 315
Cdd:MTH00200 259 GFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLtLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPL 338
|
...
gi 1946843194 316 SST 318
Cdd:MTH00200 339 TPQ 341
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-318 |
1.69e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 180.89 E-value: 1.69e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPLIID--NNIFQVLI 78
Cdd:MTH00070 19 ITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNmqTPLPTIML 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 79 CSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVI-EMNIFISIII-MTSVLIGSLGGLNQSSLRKL 156
Cdd:MTH00070 99 TIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIShLLNSNLLIIMgLLSTLIGGWGGLNQTQLRKI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 157 MAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFM 236
Cdd:MTH00070 179 MAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 237 GFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKVTQLTIPNSLIFLIILTLTSV-STLGLPF 315
Cdd:MTH00070 259 GFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNLLSLTIIlSLMLLPI 338
|
...
gi 1946843194 316 SST 318
Cdd:MTH00070 339 TPT 341
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-303 |
4.30e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.31 E-value: 4.30e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPLIIdnnifqVLICS 80
Cdd:MTH00144 19 LSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM------SLLLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIIIMTSV---LIGSLGGLNQSSLRKLM 157
Cdd:MTH00144 93 GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVlsaLVGSIGGLNQTQVRALL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 158 AYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHInQNFLTMNHDKVTKSCMFLLLLSLGGLPPFMG 237
Cdd:MTH00144 173 AYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-KDLGSLKPSYKTGLSIISLLLSLGGLPPFLG 251
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1946843194 238 FFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKVTQLTIPNSLIFLIIL 303
Cdd:MTH00144 252 FCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNL 317
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-313 |
4.93e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 177.30 E-value: 4.93e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLS--------SNPLIIdnn 72
Cdd:MTH00135 19 LTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTgqwdiqqmSHPLPT--- 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 73 ifqVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIII-MTSVLIGSLGGLNQS 151
Cdd:MTH00135 96 ---TMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLgLTSTLVGGWGGLNQT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 152 SLRKLMAYSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGG 231
Cdd:MTH00135 173 QLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 232 LPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFL------FSYT---ELKVTQLTIPnsliflii 302
Cdd:MTH00135 253 LPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLtispntLNGTtpwRLPSTQLTLP-------- 324
|
330
....*....|.
gi 1946843194 303 LTLTSVSTLGL 313
Cdd:MTH00135 325 LAISTTATLML 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-301 |
1.02e-51 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 173.43 E-value: 1.02e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSnpliIDNNIFQVLICS 80
Cdd:MTH00011 21 MALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPS----LLKNITALMLLV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNI--FISIIIMTSVLIGSLGGLNQSSLRKLMA 158
Cdd:MTH00011 97 SLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNIlpMMTSMAAMSALAGGLGGMNQTQLRPLLA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 159 YSSINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGF 238
Cdd:MTH00011 177 YSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGF 256
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1946843194 239 FPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKVTQLTIPNSLIFLI 301
Cdd:MTH00011 257 MPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTKILI 319
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
1-304 |
6.12e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 171.01 E-value: 6.12e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMhtLSSNPLiidNNIFQVLICS 80
Cdd:MTH00197 13 FSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLS--FSNLYL---SLLSVVLVIL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 81 ALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYS 160
Cdd:MTH00197 88 GLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 161 SINHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGFFP 240
Cdd:MTH00197 168 SIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFL 247
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1946843194 241 KWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELKVTQLTIPNSLIFLIILT 304
Cdd:MTH00197 248 KWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLM 311
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
5-264 |
5.77e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 131.28 E-value: 5.77e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 5 STSWLGVWMGLEINLLSFIPLMT-NTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSS-------------NPLIID 70
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskaltgGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 71 NNIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKN-CFILMTWQKIAPLMLLAYV-------IEMNIFISIIIMTSVLI 142
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIRRSllylpssPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 143 GSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENI----WELYFMIYTFLSLSIVMVFN-----MHHIYHINQNFLTMN 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1946843194 214 HDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMT 264
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-274 |
1.44e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 103.17 E-value: 1.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLS-FIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPLIIDNN------I 73
Cdd:MTH00199 112 LLVSSINWLSIYLAIELQTLTlFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINsiltgdV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 74 FQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIIIMTSVLIGSLGGLNQSSL 153
Cdd:MTH00199 192 GKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIYGAIGALNQTKI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 154 RKLMAYSSINHVGWMISAMVIGEN-------IWELYFMIYTFLSLSIVMVFNMHHIYHINQNFLTMNHdKVTKSCMFLLL 226
Cdd:MTH00199 272 KRLLAYSGIGHMGFILFGVAIGSFesiqaslIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLSRKN-PVIALTLALTF 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1946843194 227 LSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRL 274
Cdd:MTH00199 351 LSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
3-274 |
1.89e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 101.65 E-value: 1.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 3 ISSTSWLGVWMGLEINLLS-FIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILMHTLS---------------SNP 66
Cdd:MTH00196 10 ISSSNWLSVYLAIELQTLSlFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTgglhlsyinlvlnsgQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 67 LIIDNNIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIIIMTSVLIGSLG 146
Cdd:MTH00196 90 SSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSLFVGAIG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 147 GLNQSSLRKLMAYSSINHVGWMISAMVIGE----NIWELYFMIYTFLSL---SIVMVFNMHHIYHINQNFLTMNhDKVTK 219
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSIcvfSIILALNVYKNLIIEFSGLSRR-LPILA 248
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1946843194 220 SCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRL 274
Cdd:MTH00196 249 ITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-313 |
6.55e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 101.35 E-value: 6.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 3 ISSTSWLGVWMGLEINLLSFIPL-MTNTKNIMSTEASLKYFLVQALASAMLLFSIILM-----------------HTLSS 64
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgslnlagiaaalaAGGAN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 65 NPLIIdnnIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISII 135
Cdd:COG1007 199 SPLLL---LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGLAADWQLLLAVL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 136 IMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWeLYFMIYTFLSL-SIVMVFNMHHIYHINQNF 209
Cdd:COG1007 276 AVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGtplgvSAAL-FYLLAYLFMNLgAFAVILLLSRKGGEAEEI 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 210 LTMN----HDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTE 285
Cdd:COG1007 355 EDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEE 434
|
330 340
....*....|....*....|....*...
gi 1946843194 286 lkvtQLTIPNSLIFLIILTLTSVSTLGL 313
Cdd:COG1007 435 ----EAPISAPPGLRVALVIAALLVLLL 458
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-280 |
2.78e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 99.51 E-value: 2.78e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEI-NLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIILM-----------------HTL 62
Cdd:PRK05777 118 VMVSANDLLTLFLGLELlSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLygatgslsfagiakalaDGS 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 63 SSNPLIIdnnIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFIS 133
Cdd:PRK05777 198 GNSLLLL---FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvafgGLSEDWQQVLA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 134 IIIMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENIWE----LYFMIYTFLSL---SIVMV-----FNMHH 201
Cdd:PRK05777 275 IIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsavlFYLLAYLFMTLgafGVISLlrrkgGEAES 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1946843194 202 IYHINQNFltmNHDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFL 280
Cdd:PRK05777 355 ISDFAGLS---KRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYF 430
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-274 |
1.65e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.24 E-value: 1.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 1 IAISSTSWLGVWMGLEINLLSFIPLMT-NTKNIMSTEASLKYFLVQALASAMLLFSIILMH-----------TLSSNPLI 68
Cdd:TIGR01770 117 LLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYgftgslnfedlLLFLSNGM 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 69 IDNNIFQ---VLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIA---------PLMLLAYVIEMNIFISIII 136
Cdd:TIGR01770 197 LNISLLLlgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGFSEAWQIFLAIIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 137 MTSVLIGSLGGLNQSSLRKLMAYSSINHVGW-MISAMVIGENIWE---LYFMIYT------FLSLSIVMVFNMHHIYHIN 206
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYAlmslgaFGVLSLLRSYKDEWIEYIS 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1946843194 207 QNFLTMNHDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRL 274
Cdd:TIGR01770 357 DFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-274 |
1.61e-12 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 67.48 E-value: 1.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 12 WMGLEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIIL---------MHTLSSNPLIIDNNIFQV---LIC 79
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLlygatgtlnMADLAARLAELDPGLLLAafaLLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 80 SALLLKMGAAPFHFWFP-----------ATMEGLSWKNCF--ILMTWQKIAPLMLLAYViemNIFISIIIMTSVLIGSLG 146
Cdd:COG0651 213 VGFGIKAALFPLHFWLPdaypaapspvsALLSGLLTKVGVyaILRVLTLLFGADPALFL---GTLLLVLGLLTMLVGALG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 147 GLNQSSLRKLMAYSSINHVGWMISAMVIGENI---WELYFMIY-----TFLSLSIVMVFNMHHIYHINQNFLTMNHDKVT 218
Cdd:COG0651 290 ALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLglaGALFHLLNhalakALLFLAAGAIERATGTRDLDKLGGLGKRMPLT 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1946843194 219 KSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRL 274
Cdd:COG0651 370 AAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-274 |
2.34e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.49 E-value: 2.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 3 ISSTSWLGVWMGLEINLLSFIPLMTNTKNIMST---------EASLKYFLVQALASAMLLFS---------------IIL 58
Cdd:MTH00198 205 IESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgnegmlgTIL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 59 MHTL-SSNPLIIDNNIFQVLICSALLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQK-IAPLMLLAYVIEMNIFISIII 136
Cdd:MTH00198 285 SATLeTTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKfTVYILLTSLVITSKLLLSVAI 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 137 MtSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIG-----ENIWE--LYFMIYTFLSLSIVMV---FNMHHIYHIN 206
Cdd:MTH00198 365 I-SLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGtyeslQASWTyaVTYLVSALASFTVICTleeFGTRTPTSRQ 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 207 QNFLTMNHDKVTKSCMFLLL---------------LSLGGLPPFMGFFPKWLIIQTMTDMN-------YQFIIVIMVIMT 264
Cdd:MTH00198 444 RDGSFGNYNLVRRLVDLTILsrgqpyiafslaivfLSLAGIPPLLGFLGKWFILVGSIKIAfssslsiYYLVALFAIICT 523
|
330
....*....|
gi 1946843194 265 LITLFYYLRL 274
Cdd:MTH00198 524 CISAFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-313 |
4.11e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 60.28 E-value: 4.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 15 LEINLLSFIPLMTNTKNIMSTEASLKYFLVQALASAMLLFSIIL---------MHTLSSNPLIIDN-NIFQVLICSALLL 84
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLlygvtgtlnMADLAGALAENPTvVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 85 KMGAAPFHFWFPATM-EGLSWKNCFILMTWQKIAPLML---LAYVIEMNIFIS----IIIMT----SVLIGSLGGLNQSS 152
Cdd:PRK08375 215 KAAVFPLHTWLPRAYpAAPPVVTALLSGLVTKVAVYALiriYFTVFGGDFRFAlglgWLLAVlallSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 153 LRKLMAYSSINHVGWMISAMVIGENIWELYFMIYTF--------LSLSIVMVFNMHHIYHINQNFLTMNHDKVTKSCMFL 224
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLhhalmkgaLFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 225 LLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFlFSYTELKVTQLTIPNSLIFLIILT 304
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAF-FGPPPPGSEAPKQEAPLGMLAPSL 453
|
....*....
gi 1946843194 305 LTSVSTLGL 313
Cdd:PRK08375 454 ALALLSLLL 462
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-280 |
4.79e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.11 E-value: 4.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 36 EASLKYFLVQALASAMLLFSIILM-------------HTLSSNPLIIDNnIFQVLICSALLLKMGAAPFHFWFP-ATMEG 101
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLygqygtlnmaylaVKMSENPTVVAK-IALALFIAGLAMKSGAVPVHMWLPdAYPAA 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 102 LSWKNCFILMTwqKIAPLMLLAYVI-----------EMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMIS 170
Cdd:PRK08376 251 PSSISAMLLVI--KQAGLYALARVLfsiygpainlaTVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 171 AMVIGENIWELYFMI-YTFLSLSIVMVFNMHHIYHINQNFL----------TMNHDKVT------KSCMFLLL---LSLG 230
Cdd:PRK08376 329 GLGVGLAALGDPAMAsYGEIALAGGIYHIVNHALYKALLFLtagaviyetgTRNLNELGglartmPKTTIAFLigaAAIV 408
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1946843194 231 GLPPFMGFFPKWLIIQTMTDMNyQFIIVIMVIMTLITLFYYLRLTFLAFL 280
Cdd:PRK08376 409 GLPPFNGFASKWLIYESSALFN-PILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
30-313 |
2.07e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.01 E-value: 2.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 30 KNIMSTEASLKYFLVQALASAMLLFSIILMHTLSSNPL--------IIDNNIFQVLICSALLL--------KMGAAPFHF 93
Cdd:CHL00049 156 KDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIelqeivngLINTQMYNSPGISIALIfitvgigfKLSLAPFHQ 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 94 WFPATMEGLSWKNCFILMTWQKIAPLMLLAYVI---------EMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYSSINH 164
Cdd:CHL00049 236 WTPDVYEGSPTPVVAFLSVTSKVAASALATRIFdipfyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 165 VGWMISAMVIGENIWE-----LYFMIYTFLSL---SIVMVFNMHHIYHINQNFLTM-NHDKVTKSCMFLLLLSLGGLPPF 235
Cdd:CHL00049 316 IGYVIIGIIVGDSNDGyasmiTYMLFYIFMNLgtfACIVLFGLRTGTDNIRDYAGLyTKDPFLALSLALCLLSLGGIPPL 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 236 MGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAF-------LFSYTELKVTQLTIPNSLIFLIILTLTSV 308
Cdd:CHL00049 396 AGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMtgrnqeiTPYVRNYRRSPLRSNNSIELSMIVCVIAS 475
|
....*
gi 1946843194 309 STLGL 313
Cdd:CHL00049 476 TIPGI 480
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
34-191 |
4.71e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.21 E-value: 4.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 34 STEASLKYFLVQALASAMLLFSIILMHTLSSN--------PLIIDNN-----IFQVLICSALLLKMGAAPFHFWFPATME 100
Cdd:PRK02504 159 SNEAALKYLLIGAASSAIFLYGSSLLYGLSGGstqlsaiaLALITSPslglaLALVFVIAGIAFKISAVPFHQWTPDVYE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 101 GLSWKNCFILMTWQKIAPLMLL---------AYVIEMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISA 171
Cdd:PRK02504 239 GSPTPVVAFLSVGSKAAGFALAirllvtafpSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIG 318
|
170 180
....*....|....*....|....
gi 1946843194 172 MVIGEN----IWELYFMIYTFLSL 191
Cdd:PRK02504 319 LVAGTEagyaSMVFYLLAYLFMNL 342
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-279 |
4.89e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 51.13 E-value: 4.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 37 ASLKYFLVQALASAMLLFSIILM----HTLSSNPL--IIDNNIFQVLICSALLLKMGAA------PFHFWFPATMEGLSW 104
Cdd:TIGR01974 166 AAIKAFVVNRVGDFGLLLGIFLIfwyfGTLNFQEVfaLAPGAFFSALTLICLLLFIGAMgksaqlPLHTWLPDAMEGPTP 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 105 KNCFILMTWQKIAPLMLLA-------YVIEMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGE- 176
Cdd:TIGR01974 246 VSALIHAATMVTAGVYLVArtsplfeLSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAy 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 177 --NIWEL----YFMIYTFLSLSIVMVfNMHHiyhiNQNFLTM----NHDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQ 246
Cdd:TIGR01974 326 aaAIFHLmthaFFKALLFLGAGSVIH-AMHH----EQDIRKMgglrKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILE 400
|
250 260 270
....*....|....*....|....*....|....
gi 1946843194 247 -TMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAF 279
Cdd:TIGR01974 401 aAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVF 434
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-280 |
2.14e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.91 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 34 STEASLKYFLVQALASAMLLFSIILMHT----------LSSNPLIIDNNIFqVLICsaLLLKMGAA------PFHFWFPA 97
Cdd:COG1009 160 ARRAARKAFLVTRVGDLGLLLGILLLGAiagtlnfselLAAAPTILSSPLL-TLIL--LLLLLGAFgksaqfPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 98 TME-----------------GLswkncFILMtwqKIAPLMLLAYVIemNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYS 160
Cdd:COG1009 237 AMEgptpvsallhaatmvkaGV-----YLLA---RLSPLFALSPVW--LTVVAIIGAITALFAALIALAQTDIKRVLAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 161 SINHVGWMISAMVIGeNIWELYFMIYT--------FLSLSIVMvfnmhHIYHiNQNFLTMN----HDKVTKSCMFLLLLS 228
Cdd:COG1009 307 TVSQLGYMFLALGVG-AYVAALFHLLThaffkallFLGAGSVI-----HATG-TRDIRKMGglrkKMPITAITFLIGALS 379
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1946843194 229 LGGLPPFMGFFPKWLIIQTM--TDMNYQFIIVIMVIMTLITLFYYLRLTFLAFL 280
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAAleAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFF 433
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
76-175 |
4.17e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 4.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 76 VLICSALLLKMGAAPFHFWFPATMEGLSWKNCFI---LMTWQKIAPLM----LLAYVIEMNIFISIIIMTSVLIGSLGGL 148
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLhaaAVVKAGIYLLLrfspVFHDVAVWNWLLIIVGMITALMGAVFAV 291
|
90 100
....*....|....*....|....*..
gi 1946843194 149 NQSSLRKLMAYSSINHVGWMISAMVIG 175
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVG 318
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-280 |
1.56e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 43.04 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 36 EASLKYFLVQALASAMLLFSIILM----------------HTLSSNP-------LIIDNNIFQVLICSALLLKMGAAPFH 92
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLyatfgtlnmadlsakiRGLSFPLtgglagnPPLALGVALALALWAFTIKAAIFPNH 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 93 FWFP-----------ATMEGLSWK---NCFILMTWQKIAPLMLLAYVIEMNIFISIIIMT-SVLIGSLGGLNQSSLRKLM 157
Cdd:PRK12667 244 FWLPdahpaapspvsAMLSGLVVNvgaYAIIRFLYTIFGISPSLIDFRAALSPILIILGAvSAIIGALMMVVQKDVKRLL 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 158 AYSSINHVGWMISAMVIGENIWELYFMIYT----------FLSLSIVMvfnmHHIYHINQNFL--TMNHDKVTKSCMFLL 225
Cdd:PRK12667 324 AYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksllFLASGVFI----HAAGTRDIDELagLGRKMPIASFAFLIG 399
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1946843194 226 LLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFL 280
Cdd:PRK12667 400 ALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFF 454
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
82-287 |
7.50e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 82 LLLKMGAAPFHFWFPATMEGLSWKNCFILMTWQKIAPLMLLAYVIEMNIFISIIIMTSVLIGSLggLNQSSLRKLMAYSS 161
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQM--FLLKSYKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 162 INHVGWMISAMVIGENIWELYFMIYTFLSLSIVMVFNMHHIYHINQnfltmnhdkvtkscmFLLLLSLGGLPPFMGFFPK 241
Cdd:MTH00091 145 TESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVS---------------WETLLVFMNLPFSVTFFVK 209
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1946843194 242 WLIIQTMTDMNYQFIIVIMVIMTLITLFYYLRLTFLAFLFSYTELK 287
Cdd:MTH00091 210 IFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFK 255
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
37-166 |
7.52e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 37.75 E-value: 7.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 37 ASLKYFLVQALASAMLLFSIILMHTLSSN-----PLIIDNNI---FQVLICSALLL----KMGAAPFHFWFPATMEGlsw 104
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGAltfdiAELAAAPLpltAQLLLFLAFFIafavKVPMFPFHTWLPDAHVE--- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 105 kncfilmtwqkiAPL---MLLAYV---------------------IEMNIFISIIIMTSVLIGSLGGLNQSSLRKLMAYS 160
Cdd:COG1008 239 ------------APTagsVLLAGVllkmggygllrfalplfpeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
....*.
gi 1946843194 161 SINHVG 166
Cdd:COG1008 307 SVSHMG 312
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
124-312 |
9.11e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 37.70 E-value: 9.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 124 YVIEMNIFISIIIMTSV---LIGSLGGLNQSSLRKLMAYSSINHVGWMISAMVIGENIWELYFMIY--TFLSLSIVMVFN 198
Cdd:MTH00209 231 SLFSSPFFSMSLLLLGSlttLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLIThaLFKALLFICAGN 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1946843194 199 MHHIYHINQNFLTM----NHDKVTKSCMFLLLLSLGGLPPFMGFFPKWLIIQTMTDMNYQFIIVIM-VIMTLITLFYYLR 273
Cdd:MTH00209 311 IIHSHGHSQDIRMVgnlwYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILmFLSTSLTAAYSMR 390
|
170 180 190
....*....|....*....|....*....|....*....
gi 1946843194 274 LTFLAFLFSYTELKVTQLTIPNSLIFLIILTLTSVSTLG 312
Cdd:MTH00209 391 LSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITG 429
|
|
| |
