|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.49e-164 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 470.79 E-value: 1.49e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYSYADLNMVGYFFGFDYFSFMLILLSFWICSLMITASGLVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 81 LSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFS 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 161 VYNVSSTLYFPLLFDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 241 LGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 321 IYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1939459545 401 YSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLSGDYFYI 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
3.06e-117 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 350.58 E-value: 3.06e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWL---IHSMMFFSSFIFMIIFYSYADLNMVGYFFGFDYFSFMLILLSFWICSLMITASG 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWaltFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 78 LVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 158 LFSVYNVSSTLYFPLL-FDFGSYYF--MFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 235 MKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 315 FCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1939459545 395 TLYMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLSGD 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-442 |
7.25e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 347.98 E-value: 7.25e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 47 MVGYFFGFDYFSFMLILLSFWICSLMITASGLVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 127 ILGWGYQPERLQAGLYLIFYTLVASLPLLLVL---FSVYNVSSTLYFPLLFDFGSYYFMFYIFFILAFLVSMPMFLVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 284 MVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1939459545 364 MGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLSGDYF 442
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.08e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 336.18 E-value: 1.08e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYS-YADLNMVGYFFGFDYFSFMLILLSFWICSLMITASGLV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 80 YLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 160 SVYNVSSTLYFPLLFDFGSYYFM---FYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYlflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 237 IISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 317 LSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1939459545 397 YMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLSGDYFYI 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
51-437 |
3.22e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 327.54 E-value: 3.22e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 51 FFGFDYFSFMLILLSFWICSLMITAS--GLVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLIL 128
Cdd:MTH00124 55 WLGIDQISAPLLVLSCWLLPLMILASqnHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 129 GWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDFGSY------YFMFYIFFILAFLVSMPMFLVHL 202
Cdd:MTH00124 135 RWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHM 282
Cdd:MTH00124 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHM 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 283 SMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLN 362
Cdd:MTH00124 295 GLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTIN 374
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1939459545 363 LMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCL 437
Cdd:MTH00124 375 LMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
9.31e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 310.75 E-value: 9.31e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFY-----SYADLNMVGYFFGFDYFSFMLILLSFWICSLMITA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 76 S--GLVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLP 153
Cdd:MTH00044 81 SinHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 154 LLLVLFSVYNVSSTLYFPLLF------DFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 228 GYGIFRVMKIISFLGIKFNCFWL-SLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNISFILiVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1939459545 387 LSFFSAVYTLYMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLS 438
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIIN 452
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
6-437 |
7.41e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 306.07 E-value: 7.41e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 6 LMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFY-SYADLNMVGYFFGFDYFSFMLILLSFWICSLMITASG--LVYLS 82
Cdd:MTH00068 9 LMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNlPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQnhLKNEP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 83 SYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVY 162
Cdd:MTH00068 89 INRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 163 NVSSTLYFPLLFDFGSYYFM------FYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00068 169 NSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 237 IISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFC 316
Cdd:MTH00068 249 LLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFC 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 317 LSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00068 329 LANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTL 408
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1939459545 397 YMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCL 437
Cdd:MTH00068 409 YMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
3.33e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 296.80 E-value: 3.33e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWL-----IHSMMFfsSFIFMIIFYSYAD--LNMVGYFFGfDYFSFMLILLSFWICSLMI 73
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLI--SLISLLLLNQPNDnsLNFSLLFFS-DSLSTPLLILTTWLLPLML 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 74 TASG--LVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVAS 151
Cdd:MTH00110 78 MASQhhLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 152 LPLLLVLFSVYNVSSTLYFPLLfdfgSYYF----------MFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAG 221
Cdd:MTH00110 158 LPLLVALLYIQNNLGSLNFLLL----QLWAqplpnswsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 222 VLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSF 301
Cdd:MTH00110 234 ILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGAT 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 302 SLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSF 381
Cdd:MTH00110 314 ALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITI 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1939459545 382 LVLIFLSFFSAVYTLYMYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPLNILCLS 438
Cdd:MTH00110 394 ILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLN 450
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-432 |
5.01e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 287.99 E-value: 5.01e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 5 LLMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYSYADLNMVG--YFFGFDYFSFMLILLSFWICSLMITASG--LVY 80
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQnhMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 81 LSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFS 160
Cdd:MTH00206 86 EPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 161 VYNVSSTLYFPLL---FDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKI 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 238 ISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 318 SNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430
....*....|....*....|....*....|....*
gi 1939459545 398 MYSYSQHGSYYMGVYTCSLGYFREYHLLFLHWLPL 432
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
23-437 |
1.91e-83 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 263.74 E-value: 1.91e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 23 LIHSMMFFSSFIFMIIFYSYADLNMVGYFFGFDYFSFMLILLSFWICSLMITASGLVYLSSYHSSFFVFIVLF--LLIML 100
Cdd:MTH00127 28 LAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLtsLQIFL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 101 YCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTL------YFPLLF 174
Cdd:MTH00127 108 ILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLsmltlqYSQPLQ 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 175 DFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSL 254
Cdd:MTH00127 188 LSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILAL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 255 SGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:MTH00127 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLAR 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 335 GMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYMGVYTC 414
Cdd:MTH00127 348 GLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIAL 427
|
410 420
....*....|....*....|...
gi 1939459545 415 SLGYFREYHLLFLHWLPLNILCL 437
Cdd:MTH00127 428 NPSHTREHLLMALHLLPLLLLIL 450
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
2.55e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 177.51 E-value: 2.55e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDF------GSYYFMFYIF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 187 FILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIVSFICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINLMPSMAL 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1939459545 346 WWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
1.76e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 180.66 E-value: 1.76e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 48 VGYFFGFDYFSFMLILLSFWICSLMITASGLVylSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 128 LGWGYqPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLL------FDFGSYYFMFYIFFIlAFLVSMPMFLVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGI------KFNCFWLSLSLSGGVIVSFICFRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 276 YSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1939459545 356 AAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
3.88e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 171.78 E-value: 3.88e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 89 FVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTL 168
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 169 -YFPLLFDFGSYYFMFYIF--FILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVM-KIISFLGIK 244
Cdd:MTH00204 194 dYQILLNIKLPLSIQKWLLvgFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 245 FNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYER 324
Cdd:MTH00204 274 FAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1939459545 325 LGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
2.27e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 166.77 E-value: 2.27e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 89 FVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTL 168
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 169 YFPLL----FDFGSYYFMFYIFFiLAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGI 243
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 244 KFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1939459545 324 RLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSllnSILSWSTFSFLVLIFLSF---FSAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFL---SLLAAFEYSYIVGVLASLgmvLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
4.85e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 166.25 E-value: 4.85e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 52 FGFDYFSFMLILLSFWI--CSLMITASGLVYLSSYhssfFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 130 WGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDF-----GSYYFMFYIFFILAFLVSMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIK-FNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 284 MVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1939459545 364 MGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
6.06e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 165.76 E-value: 6.06e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 48 VGYFFGFDYFSFMLILLSFWICSLMITASGLVylSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 128 LGWGYqPERLQAGLYLIFYTLVASLPLLLVLFSVYNVS-----STLYFPLL---FDFGSYYFMFYIFFIlAFLVSMPMFL 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatgTFDIADLLnlpLPPGVQYWLFLAFFI-AFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK-IISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLpLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 279 VAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAP 358
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1939459545 359 PSLNLMGE-LSLLNSILSWSTFSFLVLIFLsFFSAVYTLYMY 399
Cdd:PRK05846 390 GTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
1.53e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 158.95 E-value: 1.53e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 48 VGYFFGFDYFSFMLILLSFWICSLMITASGLVYLSSyhSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQKR--VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 128 LGWGyQPERLQAGLYLIFYTLVASLPLLLVLFSVY-----NVSSTLYFPLLFDFGSYYFMFYIFFIlAFLVSMPMFLVHL 202
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYflgggTFDLLELLNLPLPFGVQTWLFLAFFI-AFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 282 MSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSL 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1939459545 362 NLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
28-419 |
6.62e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 153.14 E-value: 6.62e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 28 MFFSSFIFMIIFYSYADLNMVGYFFGFDYFSFMLILLSFWICSLMITASGLVYLSSYHSSFFVFIVLFLLIMLYcsfssl 107
Cdd:MTH00094 10 FLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSN------ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 108 sLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDFgsyyfMFYIFF 187
Cdd:MTH00094 84 -MLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-----EMFFIL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 188 ILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLgikFNCFWLSLSLSGGVIVSFICFRQ 267
Cdd:MTH00094 158 SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 268 VDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWW 347
Cdd:MTH00094 235 SDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIF 314
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1939459545 348 FLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYMGVYTCSLGYF 419
Cdd:MTH00094 315 SLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
4.96e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 118.98 E-value: 4.96e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 53 GFDYFSFMLILLSFWICSLMITASGLVylsSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGY 132
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 133 QpERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPL----LFDF-GSYYFMFYIFFILAFLVSMPMFLVHLWLPKA 207
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTWLPDA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK12561 212 HGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 287 GGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERlgSRSLLINKgMINLMPSMALWWFLFSSSNMAA---PPSLNL 363
Cdd:PRK12561 292 LGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER--THTLSIPN-MGGLAKVMPKTFALFTASSMASlalPGMSGF 368
|
330 340 350
....*....|....*....|....*....|
gi 1939459545 364 MGELSLLNSILSWSTFSFLVLIFLSFFSAV 393
Cdd:PRK12561 369 VSELTVFLGITSSDVYSSTFRTITILLAAV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
48-403 |
8.82e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 111.39 E-value: 8.82e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 48 VGYFFGFDYFSFMLILLSFwICSLMITASGLVYLSSYHS-SFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLL 126
Cdd:COG0651 68 FGIVLVADRLSALFLLLTA-LVALAVLLYSIGYMRHERRgRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 127 ILGWGYqPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDFGSYY-----FMFYIFFILAFLVSMPMFLVH 201
Cdd:COG0651 147 VALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkIISFLGIKFNCFW----LSLSLSGGVIVSFICFRQVDLKSLIAYS 277
Cdd:COG0651 226 FWLPDAYPAAPSPVSALLSGLLTKVGVYAILRV--LTLLFGADPALFLgtllLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 278 SVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAA 357
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1939459545 358 PPSLNLMGELSLLNSILSWSTFSFLVLIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
1.86e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 102.86 E-value: 1.86e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 53 GFDYFSFMLILLSFWICSLMITASGLVylsSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 133 QpERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPL----LFDFG-SYYFMFYIFFILAFLVSMPMFLVHLWLPKA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGIKFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 287 GGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGE 366
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAE 399
|
330 340
....*....|....*....|....*..
gi 1939459545 367 LSLLNSILSWSTFSFLVLIFLSFFSAV 393
Cdd:PRK02546 400 LMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
113-393 |
1.36e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 100.02 E-value: 1.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILGWGYQpERLQAGLYLIFYTLVASLPLLLVLFSVYNVSS---TLYFPLLFDfGSYYF----MFYI 185
Cdd:CHL00011 138 FIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLAN-QSYPValeiLFYI 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 186 FFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGIKFNCFWLSLSLSGGVIVSFIC 264
Cdd:CHL00011 216 GFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:CHL00011 296 LGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIF 375
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1939459545 345 LWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAV 393
Cdd:CHL00011 376 TMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
50-338 |
5.84e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 92.07 E-value: 5.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 50 YFFGFDYFSFMLILLSFWICSLMITASGLvylSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILG 129
Cdd:PRK06473 73 YHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 130 WGYQpERLQAGLYLIFYTLVASLPLL---LVLFSVYNVSSTLYFPLLFDF--GSYYFMFYIFFILAFLVSMPMFLVHLWL 204
Cdd:PRK06473 150 WGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIVSFIC-FRQVDLKSLIAYSSVAHMS 283
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1939459545 284 MVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
10-393 |
9.57e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.97 E-value: 9.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 10 FLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYSYadlNMVGYFFGFDYFSFMLILLSFWICSLMITAsgLVYLSSYHSSFF 89
Cdd:MTH00062 2 YFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVN---NVFNGLFIFDSLSFYLILLVLFLGLYSQVM--FYNLLSGVSRFF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 90 VFIVLFLLIMLYCSFSSLSLlsfYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLY 169
Cdd:MTH00062 77 LFLSLIFSILCFCVNNSLLF---WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 170 FPLLFDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFW 249
Cdd:MTH00062 154 FSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 250 LSLSLSGGVIVSficFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:MTH00062 234 CCLFSVFFLITA---CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRN 310
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1939459545 330 LLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAV 393
Cdd:MTH00062 311 WVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
2.71e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 80.69 E-value: 2.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 52 FGFDYFSFMLILLSFWICSLMITASglVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 132 YQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLL---FDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAH 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 209 VEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLS----LSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 285 VIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLM 364
Cdd:PRK08375 310 ILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 1939459545 365 GELSLLNSILSWSTFSFLVLIFL-SFFSAVYTLYMYSY 401
Cdd:PRK08375 390 SKWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
113-357 |
1.46e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 75.52 E-value: 1.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILGWGYQpERLQAGLYLIFYTLVASLPLLLVLFSV----------YNVSSTLYFPLlfdfgSYYFM 182
Cdd:PRK07363 133 FLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL-----NTQLI 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 183 FYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiISFLGIKFNCFWLSLSLSGGVIV-- 260
Cdd:PRK07363 207 LLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViy 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 261 -SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK07363 285 gALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNP 364
|
250
....*....|....*...
gi 1939459545 340 MPSMALWWFLFSSSNMAA 357
Cdd:PRK07363 365 IRGLPLTSALLVLAGMAS 382
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-398 |
9.26e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 73.08 E-value: 9.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLL------FDFGSYY------ 180
Cdd:PRK12667 139 FVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirgLSFPLTGglagnp 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 181 ----FMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLS--- 253
Cdd:PRK12667 219 plalGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSpil 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 254 ----LSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK12667 299 iilgAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRD 378
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1939459545 330 LLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLsfFSAVYTLYM 398
Cdd:PRK12667 379 IDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLI--ASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
197-394 |
2.53e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.50 E-value: 2.53e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 197 MFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIS------FLGIKFNCFWLsLSLsggVIVSFICFRQVDL 270
Cdd:PRK06458 230 LFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaigsdFPGRLLLIFGL-LSV---LVAAFFLLRQRDI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 271 KSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLF 350
Cdd:PRK06458 306 KRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1939459545 351 SSSNMAAPPSLNLMGELSLLNSILS----WSTFSFLVLIFLSFFSAVY 394
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGLArgplLIAILLLLLLTLAFAALVR 433
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-387 |
1.61e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.29 E-value: 1.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 91 FIVLFLLIMLYCSFSSLSLLSFyIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYF 170
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFL-FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 171 PLLFDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWL 250
Cdd:PRK08667 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 251 SLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLM-----------IGHGLCSSGLFCLSN 319
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAG 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1939459545 320 IIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSIL-SWSTFSFLVLIFL 387
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqSFSVADPLIKILL 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
8-341 |
6.16e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 64.25 E-value: 6.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 8 IVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYSYADLNMVGYFFGFdyfsFMLILLSFwicslmiTASGLVYLSSYHSS 87
Cdd:PRK08668 30 IGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAM----ISLLVIFS-------VAFFMVSEKTKNDA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 88 FFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILgWGYQPERLQAGLYLIFyTLVASLPLLLVLFSVYNVSST 167
Cdd:PRK08668 99 YFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 168 LYFP-----LLFDFGSYYFMFYIFFILAF-LVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFL 241
Cdd:PRK08668 177 FDFAdisqgLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGT 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 242 GI-----------KFNCFWLSLSLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLC 310
Cdd:PRK08668 257 KLfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALF 336
|
330 340 350
....*....|....*....|....*....|.
gi 1939459545 311 SSGLFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK08668 337 KGLFFLIFAAVIYRTGTTKISEMGGLIEKMP 367
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-399 |
9.80e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.54 E-value: 9.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 181 FMFYIFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGIKFNCFWLSLSLSGGV 258
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 259 IVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1939459545 339 LMPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-324 |
6.75e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.65 E-value: 6.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLIlGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDFGSYYFMFyifFILAFL 192
Cdd:PRK07234 120 YVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL---IALGLL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 193 VSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGgvivSFICFRQVDLKS 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKR 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1939459545 273 LIAYSSVAHMSMVIGGlmtmnwwGCMGSFsLMIGHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 272 MLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
1.80e-08 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 52.14 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 1 MLSYLLMIVFLTPLCFFRGFWWL-----IHSMMFFSSFIFMIIFYSYADLNMVGYFFGFDYFSFMLILLSFWICSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 1939459545 76 SG--LVYLSSYHSSFFVFIVLFLLIMLYC 102
Cdd:pfam01059 81 SQkhLKSEPNNRQRTFIFLLILLQLFLIL 109
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-398 |
1.89e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 56.69 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 80 YLSSYHSS---FFVFIVLFLLIMLyCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNlprFYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 157 VLFSVYNVSSTLYFPLLFD-----FGSYYFMFYIFFIL--AFLVSmPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGG 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEILGqadhiKNHGLFIPMIFMFLlgAFTKS-AQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 229 YGIFRVMKIISFlgikfNCFWLSLSLSGGVIV----SFICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCMG 299
Cdd:PRK12646 258 FLLFRFTPLLGL-----SNMYIYIVTFVGLITmlfgSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 300 SFSLMI---------GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALwWFLFSSSNMAAPPSLN--LMGELS 368
Cdd:PRK12646 333 SIYVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEMF 411
|
330 340 350
....*....|....*....|....*....|....*....
gi 1939459545 369 L--LNSILSWSTFSFLVLIFL-------SFFSAVYTLYM 398
Cdd:PRK12646 412 LdaLTQTGQLSQFSLISMIIIvfigviaSIFTFTYALYM 450
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
3.40e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.51 E-value: 3.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 185 IFFILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII-----SFLGIKFNCFWLSLSLSGGVI 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1939459545 340 MPSMALWWFLFSSSNMAAPPSLNLMGELSLLNSIL-SWSTFSFLVLIFLSFFSAVYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
188-394 |
3.07e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 52.46 E-value: 3.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 188 ILAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNCFWLSLSLSGGVIV--SFICF 265
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFfaELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMAL 345
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1939459545 346 WWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLI-FLSFFSAVY 394
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVlGASVVEAVY 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-396 |
1.02e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 50.97 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 5 LLMIVFLTPLCFFRGFWWLIHSMMFFSSFIFMIIFYSYAD------LNMVGYFFGFDYFSFMLILLS----FWICSLMIT 74
Cdd:PRK06589 24 LTSPFATKKDSFIRNFLLITISIFFFGNILLIDLLFLKGIraqfelMDFGNYSIGLHLEPLGLIFLLligfLWICALLYT 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 75 ASGLVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLIlGWGYQPERLQAGL-YLIFYTLVASLP 153
Cdd:PRK06589 104 PKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYkYLKILMISALLL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 154 LLLVLFSVYNVSSTLYF--PLLFDFGSYYFMFYIFFILafLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGI 231
Cdd:PRK06589 183 FLPAVILIYTKTGNLDFvsGGLFSKNQSIILLLMFIYG--IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 232 FRVMKIISFLGIKFNCFWLSLSLSGGVIV-----SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIG 306
Cdd:PRK06589 261 YKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVS 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLFSSSNMAAPPSLNLMGELSLL-----NSILSWSTFSF 381
Cdd:PRK06589 341 HSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVM 420
|
410
....*....|....*
gi 1939459545 382 LVLIFLSFFSAVYTL 396
Cdd:PRK06589 421 LVVIASSILSALYLL 435
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-365 |
3.49e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.20 E-value: 3.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLiLGWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLL------FDFGSYYFMFYIF 186
Cdd:PRK12665 137 YVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 187 FIlAFLVSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsFLGIKFNCFWLSLSLSGGVIVSFICFR 266
Cdd:PRK12665 216 LV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALW 346
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
250
....*....|....*....
gi 1939459545 347 WFLfsssnmaapPSLNLMG 365
Cdd:PRK12665 374 FFV---------PALNLGG 383
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-398 |
3.67e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.33 E-value: 3.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILGWGYQPERLQAGLYLIFYTLVASLPLLL---VLFSVYNVSSTLYFPLLFDFGSYYF--MFYIFF 187
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLgiaLLYGQYGTLNMAYLAVKMSENPTVVakIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 188 ILAFLVSMPMFLVHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRVMkiisflgikFNCFWLSLSLS--GGVIVSFIC 264
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVIIILGC 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 265 FR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM---GSFSLMIGHGLCSSGLFCLSNIIY 322
Cdd:PRK08376 296 LTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVI 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 323 ERLGSRSLLINKGMINLMPsMALWWFLFSSSNMAAPPSLN------LMGELS-LLNSILSWSTFSFLVLIFLSFFSAVYT 395
Cdd:PRK08376 376 YETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHT 454
|
...
gi 1939459545 396 LYM 398
Cdd:PRK08376 455 AFF 457
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
1.80e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 47.19 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 187 FILAFL---VSMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkIISFLGIKfNCFW--LSLSLSGGVIVS 261
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAP-GWWWgvLVLALGAISAVL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 262 FICFR--QVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCMGSFSLM------IGHGLCSSGLFCLSNIIYERLGSR 328
Cdd:PRK06521 290 GVLYAlaEHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTR 369
|
170 180 190
....*....|....*....|....*....|....
gi 1939459545 329 SLLINKGMINLMPSMAlWWFLFSSSNMAAPPSLN 362
Cdd:PRK06521 370 DMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
57-388 |
5.43e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 57 FSFMLILLSFWICsLMITASG---LVYLSSY------HSSFFVFIVLFLLIMLyCSFSSLSLLSFYIFFESSLIPTLLLI 127
Cdd:PRK12647 58 LSFLLDGLSLTFA-LLITGIGtliVLYAGGYlkghpdLGRFYSYILLFMASML-GLVLSDNLITLFVFWELTSITSFLLI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 128 lgwGYQPERLQA---GLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLLFDFGS-------YYFMFYIFFILAFLVSmPM 197
Cdd:PRK12647 136 ---GFNHEREAArraALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDvirehplYLAILLLVLGGAFTKS-AQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 198 FLVHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKIISFLGIKFNCFWLsLSLSGG---VIVSFICFRQ 267
Cdd:PRK12647 212 FPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 268 VDLKSLIAYSSVahmsMVIGGLMTMNWWGC----MGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSM 343
Cdd:PRK12647 281 TDLKLILAYSTV----SALGTLVMLLGLGSelaiKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPIT 356
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1939459545 344 ALWWFLFSSSNMAAPPSLNLMGELSLLNSIL---SWSTFsFLVLIFLS 388
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLI-LTVAAVLG 403
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-397 |
3.25e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 55 DYFSFMLILLSFWICSLMITASGLVYLSSYHSSFFVFIVLFLLIMLYCSFSSLSLLSFYIFFESSLIPTLLLILGWGYQP 134
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 135 ErLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFP--------LLFDFGSYYFMFYIFFILAFLVSMPMFLVHLWLPK 206
Cdd:PRK07691 156 Q-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMAdisvkiaeLSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPG 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGIKFNcFWLSLSLSGGVIVsFICF---RQVDLKSLIAYSSVAHMS 283
Cdd:PRK07691 235 SYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFT-HYLILILALLTII-FGVIgavAYFDIKKIIIYNIMIAVG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 284 MVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMAlWWFLFSSSNMAAPPSLNl 363
Cdd:PRK07691 313 VILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGIPPLS- 390
|
330 340 350
....*....|....*....|....*....|....
gi 1939459545 364 mGELSLLNSILSWSTFSFLVLIFLSFFSAVYTLY 397
Cdd:PRK07691 391 -GFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLY 423
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
4.11e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 4.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkIISFLGIKFNCFWLSLSLSGGVIVSFI----CFRQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 276 YSSVAHMSMVIGGL-----------MTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 1939459545 345 LwWFLFSSSNMAAPPSLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-396 |
1.67e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.70 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 113 YIFFESSLIPTLLLILgWGYQPERLQAGLYLIFYTLVASLPLLLVLFSVYNVSSTLYFPLL------FDFGSYYFMFYIF 186
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 187 FILAFLVSMPMFLVHlWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsfLGIKFNCFWLSLSLSGG---VIVSFI 263
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLL--FPQERELLHPLLATMAAitmVIGALG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459545 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSFSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSM 343
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLF 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1939459545 344 ALWWFLFSSSNMAAPPSLNLMGELSLLNSILSWSTFSFLVLIFLSFFSAVYTL 396
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| |
