|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 629.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 12 IKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMM 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 92 FMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 172 DNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 252 SDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILIT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1938966181 332 SIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-365 |
1.76e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 361.42 E-value: 1.76e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 10 PLIKMINHSLiDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:COG1290 19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 90 MMFMCMYLHIGRGLYYESFylKE----TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 166 WGGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEK----IPFHPFFTWKDSVTMILLLLLT 240
Cdd:COG1290 176 FGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNlsDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIP--NKLGGVAALLMSITILMILPFYKKSKFQGIQF 318
Cdd:COG1290 256 ALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1938966181 319 YPWNQYMFWILITSIIMLTWIGKQPveDPYIILGQILTLMYFSYFML 365
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.59e-89 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 267.31 E-value: 2.59e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 10 PLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 90 MMFMCMYLHIGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1938966181 168 GFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.47e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.07 E-value: 8.47e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 19 LIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 99 IGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1938966181 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-314 |
1.17e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.65 E-value: 1.17e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQ 121
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 629.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 12 IKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMM 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 92 FMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 172 DNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 252 SDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILIT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1938966181 332 SIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 593.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFS-YFMLNSWMALLWNKLIK 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLN 379
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 578.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMALLWNKLI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 577.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 5 LRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 85 MNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 165 IWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLIS 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 245 TQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQY 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1938966181 325 MFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 576.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 5 LRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 85 MNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 165 IWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLIS 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 245 TQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQY 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1938966181 325 MFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMALLWNKLIK 378
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLvLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 570.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYF-MLNSWMALLWNKLIK 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFiIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 567.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 3 MPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRN 82
Cdd:MTH00100 2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 83 IHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIV 162
Cdd:MTH00100 82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 163 QWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTML 242
Cdd:MTH00100 162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 243 ISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWN 322
Cdd:MTH00100 242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 323 QYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMALLWNKLIK 378
Cdd:MTH00100 322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILiLMPIASLIENNLLK 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 556.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMALLWNKLIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 543.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 4 PLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNI 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 84 HMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 164 WIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLI 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 244 STQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1938966181 324 YMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMALLWNKLI 377
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLfFFPLISYLENKLI 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
2.61e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 485.20 E-value: 2.61e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFMLNSWMALLWNKLIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-365 |
6.04e-170 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 479.20 E-value: 6.04e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 3 MPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRN 82
Cdd:MTH00022 1 MPLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 83 IHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIV 162
Cdd:MTH00022 81 LHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 163 QWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTML 242
Cdd:MTH00022 161 QWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 243 ISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWN 322
Cdd:MTH00022 241 IVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLG 320
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1938966181 323 QYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00022 321 RMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-378 |
2.50e-167 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 472.65 E-value: 2.50e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 1 MNMPLRKNQPLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLM 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 81 RNIHMNGASMMFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQ 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 161 IVQWIWGGFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLT 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1938966181 321 WNQYMFWILITSIIMLTWIGKQPVEDPYIILGQILTLMYFSYFM-LNSWMALLWNKLIK 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLiLMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-365 |
2.88e-130 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 378.51 E-value: 2.88e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 17 HSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 97 LHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYN--LSDP 254
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPRIEtlLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 255 DNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILITSII 334
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350
....*....|....*....|....*....|..
gi 1938966181 335 MLTWIGKQPV-EDPYIILGQILTLMYFSYFML 365
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-365 |
1.76e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 361.42 E-value: 1.76e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 10 PLIKMINHSLiDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:COG1290 19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 90 MMFMCMYLHIGRGLYYESFylKE----TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 166 WGGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEK----IPFHPFFTWKDSVTMILLLLLT 240
Cdd:COG1290 176 FGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 241 MLISTQAPYNlsDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIP--NKLGGVAALLMSITILMILPFYKKSKFQGIQF 318
Cdd:COG1290 256 ALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1938966181 319 YPWNQYMFWILITSIIMLTWIGKQPveDPYIILGQILTLMYFSYFML 365
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
7.59e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 358.48 E-value: 7.59e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 13 KMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 93 MCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 173 NPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKDSVtMILLLLLTMLISTQAPYNLS 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAY-NIIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 253 DPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYkksKFQGIQFYPWNQYMFWILITS 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1938966181 333 IIMLTWIGKQPVEDPYIILGQILTLMYFSYFML 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.59e-89 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 267.31 E-value: 2.59e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 10 PLIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 90 MMFMCMYLHIGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1938966181 168 GFAVDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.47e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.07 E-value: 8.47e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 19 LIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 99 IGRGLYYESFY--LKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGGFSypRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1938966181 177 SRFFSMHFMLPFIMMAFILMHLIFLHKTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-358 |
2.77e-81 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 252.60 E-value: 2.77e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 11 LIKMINHSLIDLPTPSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASM 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 91 MFMCMYLHIGRGLYYESFYLKETWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFA 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 171 VDNPTLSRFFSMHFMLPFIMMAFILMHLIFLHKTGSNNPLGMKSN-QEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPY 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 250 NLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVaALLMSITILMILPFYKKSKFQGIqfypWNQYMFWIL 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-VLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340
....*....|....*....|....*....
gi 1938966181 330 ITSIIMLTWIGKQPVEDPYIILGQILTLM 358
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.93e-44 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 148.40 E-value: 2.93e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKKSKFQGIQFYPWNQYMFWILITSIIMLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1938966181 339 IGKQPVEDPYIILGQILTLMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
1.27e-41 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 143.17 E-value: 1.27e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 208 NPLGMKSNQEKIPFHPFFTWKDSVTMILLLLLTMLISTQAPYNLSDPDNFTPANPLITPPHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 288 KLGGVAALLMSITILMILPFYKKSKFQGiQFYPWNQYMFWILITSIIMLTWIGKQPVEDPYIILGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
2.25e-41 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 144.85 E-value: 2.25e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 34 FGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLHIGRgLYYESFYLKE- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLR-VFFTGGYKKPr 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 113 --TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTLSRFFSMH-FMLPFI 189
Cdd:PRK03735 123 elNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWA 202
|
170 180
....*....|....*....|.
gi 1938966181 190 MMAFILMHLIFLHKTGSNNPL 210
Cdd:PRK03735 203 LAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
5.23e-38 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 136.00 E-value: 5.23e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 25 PSNISLWWNFGSLLGMCLIIQIMTGLFLAMHYTADISMAFQSIIHICRDVNNGWLMRNIHMNGASMMFMCMYLHIGRgLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 105 YESFYLKE---TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIWGGFAVDNPTLSRFFS 181
Cdd:CHL00070 106 LTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185
|
170 180 190
....*....|....*....|....*....|
gi 1938966181 182 MH-FMLPFIMMAFILMHLIFLHKTGSNNPL 210
Cdd:CHL00070 186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-229 |
7.39e-37 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 131.21 E-value: 7.39e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966181 89 SMMFMCMYLHIGRGLYYESFYLKE--TWLTGSIILFLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYIGNQIVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1938966181 167 GGFAVDNPTLSRFFSMHFM-LPFIMMAFILMHLIFLHKTGSNNPLGMKSNQEKIPFHPFFTWKD 229
Cdd:pfam13631 81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKM 144
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
259-314 |
9.97e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 56.73 E-value: 9.97e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQ 122
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
259-314 |
6.60e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 54.62 E-value: 6.60e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQ 121
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-314 |
1.17e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.65 E-value: 1.17e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966181 259 PANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVAALLMSITILMILPFYKK-SKFQ 314
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQ 121
|
|
|