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Conserved domains on  [gi|1938966139|gb|QPK42064|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Falconius longicornis]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-165 1.06e-22

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 88.32  E-value: 1.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   1 MKLIFIMSYTLNSAFMSMKQPMSLIIIILMQTTLTIAMMNKLTQSPWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNNF 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  81 TTAITMTMTITTIMTpftkteLIFKMTKQLFMKIYHQPVNTYLYLTMMLNMQMYPLYIMMMMYLFITLIAVNKIINLNMG 160
Cdd:MTH00166   81 KLLILFLLMLLLMLN------NFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1938966139 161 PLRKK 165
Cdd:MTH00166  155 PLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-165 1.06e-22

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 88.32  E-value: 1.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   1 MKLIFIMSYTLNSAFMSMKQPMSLIIIILMQTTLTIAMMNKLTQSPWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNNF 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  81 TTAITMTMTITTIMTpftkteLIFKMTKQLFMKIYHQPVNTYLYLTMMLNMQMYPLYIMMMMYLFITLIAVNKIINLNMG 160
Cdd:MTH00166   81 KLLILFLLMLLLMLN------NFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1938966139 161 PLRKK 165
Cdd:MTH00166  155 PLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-165 1.06e-22

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 88.32  E-value: 1.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   1 MKLIFIMSYTLNSAFMSMKQPMSLIIIILMQTTLTIAMMNKLTQSPWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNNF 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  81 TTAITMTMTITTIMTpftkteLIFKMTKQLFMKIYHQPVNTYLYLTMMLNMQMYPLYIMMMMYLFITLIAVNKIINLNMG 160
Cdd:MTH00166   81 KLLILFLLMLLLMLN------NFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1938966139 161 PLRKK 165
Cdd:MTH00166  155 PLRSK 159
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 1-165 1.20e-06

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 45.77  E-value: 1.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   1 MKLIFIMSYTLNSAFMSMKQPMSLIIIILMQTTLTIAMMNKLTQSpWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNNF 80
Cdd:MTH00212    3 LSLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIITMESNS-WYGYILFLIYIGGLLVLFGYMVALSPNEHLFFKK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  81 TTAITMTMTITTIMTPFTKTELIFKMTKQLFMKIyhqpvntYLYLTMMLNMQMYPLYIMMMMYLFITLIAVNKIINLNMG 160
Cdd:MTH00212   82 YFKGFGMILISLNLYLLLMTLGSSNFSPMLNLKL-------ELNVSKILSNNNIPILLFLGLILLIALLMVVKICQYYKG 154


                  ....*
gi 1938966139 161 PLRKK 165
Cdd:MTH00212  155 PLRPF 159
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 1-163 2.29e-05

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 42.18  E-value: 2.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   1 MKLIFIMSYTLNSAFMSMKQPMSLIIIILMQTTLTIAMMNkLTQSPWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNNF 80
Cdd:MTH00152    3 LMILLSVCFSLFLLLPLSKQPLSLGLVLLLLSLFVCVEIG-LTLSSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  81 TTAITMTMTITTIMTPFTKTELIfKMTKQLFMKIYHQPVNTYLYLTMMLNMQMYPLYIMMMMYLFITLIAVNKIINLNMG 160
Cdd:MTH00152   82 KFVFFSLTLFGFLGLFFFFLYLY-SSGGLSLSSLFDGSSGSLSFGGGLYSSSGWSIFVFLAVLLLIVMVSVVKICYYEEG 160


                  ...
gi 1938966139 161 PLR 163
Cdd:MTH00152  161 SLR 163
ND6 MTH00015
NADH dehydrogenase subunit 6; Validated
 5-166 8.42e-03

NADH dehydrogenase subunit 6; Validated


Pssm-ID: 164590  Cd Length: 155  Bit Score: 34.83  E-value: 8.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139   5 FIMSYTLNSAFMSMKQPMSLIIIILMqTTLTIAMMNKLTQSPWFSYLLMIIFIGGMMVLFVYITGISPNEKNKNnfttaI 84
Cdd:MTH00015    7 LILMISLTCSLFLATTPITLGINILM-MALLLATTMASALSSWFAFLTFLIYVGGMLVMFAYFLALTPNQQLNL-----G 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966139  85 TMTMTITTIMTPFTKTELIFKMTKQLFMKIYhqPVNTYLYLTMMLnmqmyPLYIMMMMYLFITLIAVNKIINLNMGPLRK 164
Cdd:MTH00015   81 PMAKYTLITLLTLSTTLKLTNPPSPSFFSST--QGNTFLYQPENA-----PLLIFLALILLLTMVIVVKLTRRSSGPLRP 153


                  ..
gi 1938966139 165 KH 166
Cdd:MTH00015  154 FK 155
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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